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Anopheles gambiae
cluster # 7818 cluster # 7818       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7818#0 length = 960 sequences # 1  
consensus_7818#1 length = 910 sequences # 2  
consensus_7818#2 length = 658 sequences # 3  
consensus_7818#3 length = 593 sequences # 1  
consensus_7818#4 length = 590 sequences # 1  

consensusID : consensus_7818#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 960
fasta sequence
                              [CAGAATTGCCCGAGGTNTAAGCAGCAGCAGCCCGNGCCACCGCTTGTGTGTGAGAGAGAGCTGGTGTCCCTCTACCTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGCGCAGCACGAACAGGCTATCCCCGGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCTCGCTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAGACGTGATTCGCGTGATATGGGTCCTCTCGACTGTATCTCGAGCGTGCTGCAGAGAGTAGCTGTANCGAACGGCGTGCACAGGTGCATCCATGCCCAAAACGCCATCTCACCGTCGGCAGAAAACGTTCCGCNAAGGATGAAACTGTTNCCCTTGGAAAGCANCTGACATGTANTGGNCCAGGGAGCCCTCCTGACAGTGGGAGCAATNTGGGTGAACCAATGTTGACTCAGCTGGGTTCAGNNATCTTCCTTGAGCAACAACAATTCGTACANAGGGAAANTACTTTGGCGAGNAGGANAAAAANACAACCANGGCCTGTAGCTGGCGGCAAAGGTCNTTAGTACCNCGTTTCGAGTGTATGACGGGGTNTAACGTTTNTGTACGTCNTTNGGGCACACTNGTGCCCGGAACGTNTCAANTAACNAANANGTGGTTGGAGGAANAGCANTGTTGGAAACAAAGCCCGATTGGGNGGGTTCNAGNCCCGACGATNTAACTGCTGGGCGTTTGCGANGGCGCGCAATTGCNCCGTTGTGCGCCAGAGCATGGGGGTTACTATGACCGGACCGANGGCGCCNGGGCAGGGATGTGCCGTATCCNAAACGNGGTAGTAGACAGTACNAGTAATATTGGGGAAGTTGGTGACGGCNCCGTNTAAGGGGGCGGATATTANGNTGCGTGGGGATTAGGAGGGTAAGAAGGGANANCGGTGANGNGGCNN]

[+] EMBL AL932290             [CAGAATTGCCCGAGGTNTAAGCAGCAGCAGCCCGNGCCACCGCTTGTGTGTGAGAGAGAGCTGGTGTCCCTCTACCTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGCGCAGCACGAACAGGCTATCCCCGGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCTCGCTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAGACGTGATTCGCGTGATATGGGTCCTCTCGACTGTATCTCGAGCGTGCTGCAGAGAGTAGCTGTANCGAACGGCGTGCACAGGTGCATCCATGCCCAAAACGCCATCTCACCGTCGGCAGAAAACGTTCCGCNAAGGATGAAACTGTTNCCCTTGGAAAGCANCTGACATGTANTGGNCCAGGGAGCCCTCCTGACAGTGGGAGCAATNTGGGTGAACCAATGTTGACTCAGCTGGGTTCAGNNATCTTCCTTGAGCAACAACAATTCGTACANAGGGAAANTACTTTGGCGAGNAGGANAAAAANACAACCANGGCCTGTAGCTGGCGGCAAAGGTCNTTAGTACCNCGTTTCGAGTGTATGACGGGGTNTAACGTTTNTGTACGTCNTTNGGGCACACTNGTGCCCGGAACGTNTCAANTAACNAANANGTGGTTGGAGGAANAGCANTGTTGGAAACAAAGCCCGATTGGGNGGGTTCNAGNCCCGACGATNTAACTGCTGGGCGTTTGCGANGGCGCGCAATTGCNCCGTTGTGCGCCAGAGCATGGGGGTTACTATGACCGGACCGANGGCGCCNGGGCAGGGATGTGCCGTATCCNAAACGNGGTAGTAGACAGTACNAGTAATATTGGGGAAGTTGGTGACGGCNCCGTNTAAGGGGGCGGATATTANGNTGCGTGGGGATTAGGAGGGTAAGAAGGGANANCGGTGANGNGGCNN]


>consensus_7818#0 CAGAATTGCCCGAGGTNTAAGCAGCAGCAGCCCGNGCCACCGCTTGTGTGTGAGAGAGAG CTGGTGTCCCTCTACCTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGCGCAGCACGAA CAGGCTATCCCCGGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAA GACAAACTTCACCTCCCTCGCTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAGAC GTGATTCGCGTGATATGGGTCCTCTCGACTGTATCTCGAGCGTGCTGCAGAGAGTAGCTG TANCGAACGGCGTGCACAGGTGCATCCATGCCCAAAACGCCATCTCACCGTCGGCAGAAA ACGTTCCGCNAAGGATGAAACTGTTNCCCTTGGAAAGCANCTGACATGTANTGGNCCAGG GAGCCCTCCTGACAGTGGGAGCAATNTGGGTGAACCAATGTTGACTCAGCTGGGTTCAGN NATCTTCCTTGAGCAACAACAATTCGTACANAGGGAAANTACTTTGGCGAGNAGGANAAA AANACAACCANGGCCTGTAGCTGGCGGCAAAGGTCNTTAGTACCNCGTTTCGAGTGTATG ACGGGGTNTAACGTTTNTGTACGTCNTTNGGGCACACTNGTGCCCGGAACGTNTCAANTA ACNAANANGTGGTTGGAGGAANAGCANTGTTGGAAACAAAGCCCGATTGGGNGGGTTCNA GNCCCGACGATNTAACTGCTGGGCGTTTGCGANGGCGCGCAATTGCNCCGTTGTGCGCCA GAGCATGGGGGTTACTATGACCGGACCGANGGCGCCNGGGCAGGGATGTGCCGTATCCNA AACGNGGTAGTAGACAGTACNAGTAATATTGGGGAAGTTGGTGACGGCNCCGTNTAAGGG GGCGGATATTANGNTGCGTGGGGATTAGGAGGGTAAGAAGGGANANCGGTGANGNGGCNN



consensusID : consensus_7818#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 910
fasta sequence
                              [CCGCGGACGCGTGGGAATTTCTACAACGAACTCATTGCCAAAATTAAAAAAAAAAAACTCTATCGAAACAATTGCGCTGCCTGCTAGTGACTGCTGTTTGCAAGTGTCCTGACAACGCTAATCCTGAAACGTCTCGCAAGTGCCAAACGCGTTGTGTCCTACGAAGGTGCAAAACGAAACTGTGAACGCTGGTAGCGAGAAGCCAAGGAGATCAACGAGATCTGATCATCGCCCGGAAGCAGAAGAAAGCGTGGCAGTGCCTGTGTAACGACCTACTCGCGATCACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGTCCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGCACCGACACGGCTCTCATCTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAACTACCATGCGCTCAACTCGACGGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCGGGCGCGGCCTACCTGCCGATCGATCCGACCTTCCCGCCGAACCGCATCCAGCACATACTGGGGGAGGCGAAGCCGGCGCTGGTCGTGTACGATGCCGACTACGACAATGCGGCCATCTTTGGCAAGACGCCCGCGGTTAGCTATGCCGAGCTGCGCAAGCGGGCGAGCGACCTGAGCAACGCCAACATCCGGCCGGAAGCGATGCTTGGCAAAGGCGAAGCGCAGCTCGCCCTCGTACTGTACACGTCGGGCAGTACCGGTGTGCCCGAAAGGTGTTCGGCTCAA]

[+] EMBL BM631867             [CCGCGGACGCGTGGGAATTTCTACAACGAACTCATTGCCAAAATTAAAAAAAAAAAACTCTATCGAAACAATTGCGCTGCCTGCTAGTGACTGCTGTTTGCAAGTGTCCTGACAACGCTAATCCTGAAACGTCTCGCAAGTGCCAAACGCGTTGTGTCCTACGAAGGTGCAAAACGAAACTGTGAACGCTGGTAGCGAGAAGCCAAGGAGATCAACGAGATCTGATCATCGCCCGGAAGCAGAAGAAAGCGTGGCAGTGCCTGTGTAACGACCTACTCGCGATCACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGTCCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGCACCGACACGGCTCTCATCTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAACTACCATGCGCTCAACTCGACGGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCGGGCGCGGCCTACCTGCCGATCGATCCGACCTTCCCGCCGAACCGCATCCAGCACATACTGGGGGAGGCGAAGCCGG                                                                                                                                                                                                                 ]
[+] EMBL BM619740             [                                                                                                                                                                                                                                                                                                                        ccgGCTGGCCGTCGTCAAGGGAAAGCTGTGTCCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGCACCGACACGGCTCTCATCTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAACTACCATGCGCTCAACTCGACGGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCGGGCGCGGCCTACCTGCCGATCGATCCGACCTTCCCGCCGAACCGCATCCAGCACATACTGGGGGAGGCGAAGCCGGCGCTGGTCGTGTACGATGCCGACTACGACAATGCGGCCATCTTTGGCAAGACGCCCGCGGTTAGCTATGCCGAGCTGCGCAAGCGGGCGAGCGACCTGAGCAACGCCAACATCCGGCCGGAAGCGATGCTTGGCAAAGGCGAAGCGCAGCTCGCCCTCGTACTGTACACGTCGGGCAGTACCGGTGTGCCCGAAAGGTGTTCGGCTCAA]


>consensus_7818#1 CCGCGGACGCGTGGGAATTTCTACAACGAACTCATTGCCAAAATTAAAAAAAAAAAACTC TATCGAAACAATTGCGCTGCCTGCTAGTGACTGCTGTTTGCAAGTGTCCTGACAACGCTA ATCCTGAAACGTCTCGCAAGTGCCAAACGCGTTGTGTCCTACGAAGGTGCAAAACGAAAC TGTGAACGCTGGTAGCGAGAAGCCAAGGAGATCAACGAGATCTGATCATCGCCCGGAAGC AGAAGAAAGCGTGGCAGTGCCTGTGTAACGACCTACTCGCGATCACCTTACCGACACCAT GGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGTCCGCTGCAGCCGACCTT ACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGCACCGACACGGCTCTCAT CTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAACTACCATGCGCTCAACTCGAC GGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAAGGAGCAGGCCCGGTCGCAGCC CAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCATCCGACCGATCGGCTCGTGAC GACGCTGCTGGCGATCTGGAAGGCGGGCGCGGCCTACCTGCCGATCGATCCGACCTTCCC GCCGAACCGCATCCAGCACATACTGGGGGAGGCGAAGCCGGCGCTGGTCGTGTACGATGC CGACTACGACAATGCGGCCATCTTTGGCAAGACGCCCGCGGTTAGCTATGCCGAGCTGCG CAAGCGGGCGAGCGACCTGAGCAACGCCAACATCCGGCCGGAAGCGATGCTTGGCAAAGG CGAAGCGCAGCTCGCCCTCGTACTGTACACGTCGGGCAGTACCGGTGTGCCCGAAAGGTG TTCGGCTCAA



consensusID : consensus_7818#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 658
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGAAAACTGCCAACAGCAGCAGCAGCAGCAGCAGCCCGCGCCACCGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGAT--TGTGTGTGTGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAGAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAATCGATTCGCAAAACGTGATTCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTGCACAGGTGCATCCAGCCCAAAACGCCATCTCACCCG-TCGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCCTCTGACAGTGGAGAATTTGGTGAAAAAGTGACTCAGTGGTCAGTTTTCTGACAAAATTTCTACAACGAACTCATTGCCAAAA-AAAAGAAACAATAAACTCGAAACAATTGCGCTGCCTGCTAGCGACTGCTGTTTGCAAGTGTCCGGACAACGCTAATCCTGAAACGTCTCGCAAGTGCCAAACGTGTTATCCTACGAAGGTGCAAAACGAAACTGTGAACGCTGGTAG]

[+] EMBL BM641909             [CCGCCCACGCGTCCGCCCACGCGTCCGCGAAAACTGCCAACAGCAGCAGCAGCAGCAGCAGCCCGCGCCACCGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAGAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAATCGATTCGCAAAACGTTATTCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTGCACAGGTGCATCCAGCCCAAAACGCCATCTCACCCGTTTGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCCTCTGACAGTGGAGAATTTGGTGAAAAAGTGACTCAGTGGTCAGTTTTCAGACAAAATTTCTGCAACAAACTCATTGCCAAAA AAAAGAAACAATAAACTCGAAACAATTGCGCTGCCTGCTAGCGACTGCTGTTTGCAAGTGTCCGGACAACGCTAATCCTGAAACGTCTCGCAAGTGCCAAACGTGTTATCCTACGAAGGTGCAAAACGAAACTGTGAACGCTGGTAG]
[+] EMBL BM614210             [                           ccgAAACTGCCAACAGCAGCAGCAGCAGCAGCAGCCCGCGCCACCGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGAT  TGTGTGTATGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCCACCGAGGTGTCGACAATACTACAGAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAATCGATTCGCAAAACGTGATTCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTGCACATGTGCATCCAGCCCAAAACGCCATCTCACCCG TCGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCCTCTGACAGTGGAGAATTTGGTGAAAAAGTGACTCAGTGGTCAGTTTTCTGACAAAATTTCTACAACGAACTCATTGCCAAAATAAAAAAAAAACTCTA TCGAAACAATTGCGCTGCCTGCTAGTGACTGCTGTT                                                                                               ]
[+] EMBL BX624102             [                                                                    CACCGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGAT    TGTGTGTGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAACGTGATTCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTGCACAGGTGCATCCAGCCCAAAACGCCATCTCACCCG TCGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCCTCTGACAGTGGAGAATTTGGTGAAAAAGTGACTCAGTGGTCAGTTTTCTGACAAAATTTCTACAACGAACTCAT                                                                                                                                                            ]


>consensus_7818#2 CCGCCCACGCGTCCGCCCACGCGTCCGCGAAAACTGCCAACAGCAGCAGCAGCAGCAGCA GCCCGCGCCACCGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGATT GTGTGTGTGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCTGCCG AGGTGTCGACAATACTACAGAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACG CATCGCAAAATCGATTCGCAAAACGTGATTCGCGTGATTGGGTCCTCTCGACTGTTTCGA CGTGTGCAGAGAGTAGTGTTCGACGCGTGCACAGGTGCATCCAGCCCAAAACGCCATCTC ACCCGTCGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGC CCAGCAGCCTCTGACAGTGGAGAATTTGGTGAAAAAGTGACTCAGTGGTCAGTTTTCTGA CAAAATTTCTACAACGAACTCATTGCCAAAAAAAAGAAACAATAAACTCGAAACAATTGC GCTGCCTGCTAGCGACTGCTGTTTGCAAGTGTCCGGACAACGCTAATCCTGAAACGTCTC GCAAGTGCCAAACGTGTTATCCTACGAAGGTGCAAAACGAAACTGTGAACGCTGGTAG



consensusID : consensus_7818#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence
                              [CCGAACGGGTGTGGATCTTTATCATTGTTGCCCTACGGTCGGTCGCAATCGAGCTGTGTGTGTGTGTGATCGGTCCACTTTTGCGCCACTTCGGAGCTGATTAGTGCGCTACGAATCACCGCCAAGTGCACTTCGCAACAAAACAGTGTGGATAGCATTTAGCAGCCTATTTCCAGTCCCTTGCCATCAGCGCCCGGAAGCAGAAGAAAGCGTGGCAGTGCCTGTGTAACGACCTACTCGCGATCACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGTCCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGCACCGACACGGCTCTCATCTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAACTACCATGCGCTCAACTCGACGGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCGGGCGCGG]

[+] EMBL BM616551             [CCGAACGGGTGTGGATCTTTATCATTGTTGCCCTACGGTCGGTCGCAATCGAGCTGTGTGTGTGTGTGATCGGTCCACTTTTGCGCCACTTCGGAGCTGATTAGTGCGCTACGAATCACCGCCAAGTGCACTTCGCAACAAAACAGTGTGGATAGCATTTAGCAGCCTATTTCCAGTCCCTTGCCATCAGCGCCCGGAAGCAGAAGAAAGCGTGGCAGTGCCTGTGTAACGACCTACTCGCGATCACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGTCCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGCACCGACACGGCTCTCATCTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAACTACCATGCGCTCAACTCGACGGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCGGGCGCGG]


>consensus_7818#3 CCGAACGGGTGTGGATCTTTATCATTGTTGCCCTACGGTCGGTCGCAATCGAGCTGTGTG TGTGTGTGATCGGTCCACTTTTGCGCCACTTCGGAGCTGATTAGTGCGCTACGAATCACC GCCAAGTGCACTTCGCAACAAAACAGTGTGGATAGCATTTAGCAGCCTATTTCCAGTCCC TTGCCATCAGCGCCCGGAAGCAGAAGAAAGCGTGGCAGTGCCTGTGTAACGACCTACTCG CGATCACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCT GTGTCCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTG CGGCACCGACACGGCTCTCATCTACAACGACGAGGATGGACGCGGCGAGGTGCAGATCAA CTACCATGCGCTCAACTCGACGGCCAACCGGCTGGCCACGGCCATGCTGCACCGCATCAA GGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGCGGTCTGTATGCA TCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCGGGCGCGG



consensusID : consensus_7818#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [ATNGCCCAGGGTTAACAGCAGCAGCAGCAGCAGCANCCCGCGCACGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAACGTGATTCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTGCACAGGTGCATCCAGGCCCAAAACGCCATCTCACCCGTCGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCTCTGACCAGTGGAGAATCTGGTGAACAGAAGTTGACTCCAGTAGGGGTCCAGGTTTTTTCCCTGGAACCACAACACATTTNTCTCCCTAACCAAAGCCGGGAAAAACCTCTTCCAATTTTGGCCCCACAATCAAGTAGCACACAACAACACANCCCAACGAACACAAACCANGGGGCATNGATTAGGGCC]

[+] EMBL AL934780             [ATNGCCCAGGGTTAACAGCAGCAGCAGCAGCAGCANCCCGCGCACGCTTGGTGTGAGAGAGAGCTGGTGTCCTTTTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGCGCAGCACGAACAGCCTTCCCCGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAACGTGATTCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTGCACAGGTGCATCCAGGCCCAAAACGCCATCTCACCCGTCGCCAGAAAACGTTCCAGCAAGGAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCTCTGACCAGTGGAGAATCTGGTGAACAGAAGTTGACTCCAGTAGGGGTCCAGGTTTTTTCCCTGGAACCACAACACATTTNTCTCCCTAACCAAAGCCGGGAAAAACCTCTTCCAATTTTGGCCCCACAATCAAGTAGCACACAACAACACANCCCAACGAACACAAACCANGGGGCATNGATTAGGGCC]


>consensus_7818#4 ATNGCCCAGGGTTAACAGCAGCAGCAGCAGCAGCANCCCGCGCACGCTTGGTGTGAGAGA GAGCTGGTGTCCTTTTTGTGCGTGTGTGAGATTGTGTGTGTGTGTGTGCGCAGCACGAAC AGCCTTCCCCGCTCGTCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGAC AAACTTCACCTCCCTCGTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAACGTGAT TCGCGTGATTGGGTCCTCTCGACTGTTTCGACGTGTGCAGAGAGTAGTGTTCGACGCGTG CACAGGTGCATCCAGGCCCAAAACGCCATCTCACCCGTCGCCAGAAAACGTTCCAGCAAG GAGAAACGTTCCCTGAAGCAGCGAATGTTTGCCCAGCAGCTCTGACCAGTGGAGAATCTG GTGAACAGAAGTTGACTCCAGTAGGGGTCCAGGTTTTTTCCCTGGAACCACAACACATTT NTCTCCCTAACCAAAGCCGGGAAAAACCTCTTCCAATTTTGGCCCCACAATCAAGTAGCA CACAACAACACANCCCAACGAACACAAACCANGGGGCATNGATTAGGGCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7818#0      -------------------------------CAGAATTGCCCGAGGTNTAAGCAGCAG-- 27
consensus_7818#4      -------------------------ATNGCCCAGGGTTAACAGCAGCAGCAGCAGCAG-- 33
consensus_7818#2      CCGCCCACGCGTCCGCCCACGCGTCCGCGAAAACTGCCAACAGCAGCAGCAGCAGCAG-- 58
consensus_7818#1      --CCGCGGACGCGTGGGAATTTCTACAACGAACTCATTGCCAAAATTAAAAAAAAAAAAC 58
consensus_7818#3      ----CCGAACGGGTGTGGATCTTTATCA-----TTGTTGCC----CTACGG--------- 38
                                                              *                   

consensus_7818#0      -CAGCCCGNGCCACCGC-TTGTGTGTGAGAGAGAGCTGGTGTCCCTCTACCTTG----TG 81
consensus_7818#4      -CANCCCGCGC--ACGC-TTG-GTGTGAGAGAGAGCTGGTGTCCTT----TTTG----TG 80
consensus_7818#2      -CAGCCCGCGCCACCGC-TTG-GTGTGAGAGAGAGCTGGTGTCCTT----TTTG----TG 107
consensus_7818#1      TCTATCGAAACAATTGCGCTGCCTGCTAGTGACTGC-TGTTTGCAAGTGTCCTGACAACG 117
consensus_7818#3      TCGGTCG---CAATCGAGCTGTGTGTGTGTGTGATC-GGTCCAC-----TTTTG----CG 85
                       *   *    *    *   **  **   * *    *  **   *        **     *

consensus_7818#0      CGTGTGTGAGATTGTGT-GTGTGTGTGTG--CGCAGCACGAACAGGCTATCCCCGGCTCG 138
consensus_7818#4      CGTGTGTGAGATTGTGT-GTGTGTGTGTG--CGCAGCACGAACAGCC--TTCCCCGCTCG 135
consensus_7818#2      CGTGTGTGAGATTGTGT-GTGTGTGTGTGTGCGCAGCACGAACAGCC--TTCCCCGCTCG 164
consensus_7818#1      CTAATCCTGAAACGTCTCGCAAGTGCCAA-ACGCGTTGTGTCCTACG---AAGGTGCAAA 173
consensus_7818#3      CCACTTCGGAG----CTGATTAGTGCGCT-ACGAATCACCGCCAAGT---GCACTTCGCA 137
                      *   *           *     ***      **         *             *   

consensus_7818#0      TCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCT 198
consensus_7818#4      TCTAAACAGTCTGCCGAGGTGTCGACAATACTACAAAGCCAAGACAAACTTCACCTCCCT 195
consensus_7818#2      TCTAAACAGTCTGCCGAGGTGTCGACAATACTACAGAGCCAAGACAAACTTCACCTCCCT 224
consensus_7818#1      ACGAAACTGTGAACGCTGGTAGCGAGAAGCCAAGGAGATCAACGAGATCTGATCATCGCC 233
consensus_7818#3      ACAAAACAGTGTG-GATAGCATTTAGCAGCCTATT--TCCAGTCCCTTGCCATCAGCGCC 194
                       * **** **        *     *  *  * *      **            *  * * 

consensus_7818#0      CGCTGTCCCAATAGACGCATCGCAAAACCAAATTTCTAAGACGTGATTCGCGTGATATGG 258
consensus_7818#4      CG-TGTCCCAATAGACGCATCGCAAAACCAAATTTCTAA-ACGTGATTCGCGTGAT-TGG 252
consensus_7818#2      CG-TGTCCCAATAGACGCATCGCAAAATCGA-TTCGCAAAACGTGATTCGCGTGAT-TGG 281
consensus_7818#1      CGGAAGCAGAAGAAA-GCGTGGCAGTGCC---TGTGTAA--CGACCTACTCGCGAT---C 284
consensus_7818#3      CGGAAGCAGAAGAAA-GCGTGGCAGTGCC---TGTGTAA--CGACCTACTCGCGAT---C 245
                      **    *  ** * * ** * ***    *   *    **  **   * * ** ***    

consensus_7818#0      GTCCTCTCGACTGTATCTCGAGCGTGCTGCAGAGAGTAGCTGT--ANCGAACGGCGTGCA 316
consensus_7818#4      GTCCTCTCGACTGTTTC---GACGTG-TGCAGAGAGTAG---T--GTTCGACG-CGTGCA 302
consensus_7818#2      GTCCTCTCGACTGTTTC---GACGTG-TGCAGAGAGTAG---T--GTTCGACG-CGTGCA 331
consensus_7818#1      ACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGT- 343
consensus_7818#3      ACCTTACCGACACCATGGGTACCCTGCCGCAGCTGGCCGTCGTCAAGGGAAAGCTGTGT- 304
                        * *  ****    *      * **  ****   *  *   *       * *  ***  

consensus_7818#0      CAGGTGCATCCATGCCCAAAACGCCATCTC-----ACC-GTCGGCAGAAAACGTTCCGCN 370
consensus_7818#4      CAGGTGCATCCAGGCCCAAAACGCCATCTC-----ACCCGTCGCCAGAAAACGTTCCAGC 357
consensus_7818#2      CAGGTGCATCCA-GCCCAAAACGCCATCTC-----ACCCGTCGCCAGAAAACGTTCCAGC 385
consensus_7818#1      CCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGC 403
consensus_7818#3      CCGCTGCAGCCGACCTTACTGCACCGTACCTTCGAATCGAACGTTGACAAATTCTGCGGC 364
                      * * **** **   *  *   * ** *  *     * *   **     ***   * *   

consensus_7818#0      AAGGATGAAACTGTTNCCCTTGGAAAGCANCTGACATGTANTGGNCCAGGGAGCCCTCCT 430
consensus_7818#4      AAGGA-GAAAC-GTTCCCT----GAAGCAGCGAA----TGTTTGCCCAGCAG---CTCTG 404
consensus_7818#2      AAGGA-GAAAC-GTTCCCT----GAAGCAGCGAA----TGTTTGCCCAGCAG---CCTCT 432
consensus_7818#1      ACCGACACGGCTCTCATCT----ACAACGACGAG----GATGGACGCGGCGAGG-TGCAG 454
consensus_7818#3      ACCGACACGGCTCTCATCT----ACAACGACGAG----GATGGACGCGGCGAGG-TGCAG 415
                      *  **     *  *   *       * *  *               * *           

consensus_7818#0      GACAGTGGGAGCAATNTGGGTGAACCAATGTTGACTCAGCT--GGGTTCAGNNATCTTCC 488
consensus_7818#4      ACCAGTGGAG--AATCTGG-TGAACAGAAGTTGACTCCAGTAGGGGTCCAGGTTTTTTCC 461
consensus_7818#2      GACAGTGGAG--AATTTGG-TGAA---AAAGTGACTCAGT-----GGTCAGTTTTCTGAC 481
consensus_7818#1      ATCAACTACC---ATGCGCTCAACTCGACGGCCAACCGGCT----GGCCACGGCCATGCT 507
consensus_7818#3      ATCAACTACC---ATGCGCTCAACTCGACGGCCAACCGGCT----GGCCACGGCCATGCT 468
                        **         **  *    *    *     *  *        *  **      *   

consensus_7818#0      TTGAGCAACAACAATTCGTACANAGGGAAANTACTTTGGCGAGNAGGANAAAAANACAAC 548
consensus_7818#4      CTGG--AACCACAA--CACATTTNTCTCCCTAACCAAAGCCGGGAAAAACCTCTTCCAAT 517
consensus_7818#2      AAAA-TTTCTACAA--CGAACTCATTGCCAAAAA-AAAGAAACAATAAACTCGAAACAAT 537
consensus_7818#1      GCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGC 567
consensus_7818#3      GCACCGCATCAAGGAGCAGGCCCGGTCGCAGCCCAACACCGACGGCGACTACATCGTGGC 528
                                *     *                              *            

consensus_7818#0      CANGGCCTGTAGCTGGCGGCAAAGGTCNTTAGTACCNCGTTTCGAGTGTATGACGGGGTN 608
consensus_7818#4      TTTGGCCCCACAATCA-AGTAGCACACAACAACACANCCCAACGAACACAAACCANGGGG 576
consensus_7818#2      TGCG-CTGCCTGCTAGCGACTGCTGTTTGCAAGTGTCCGGACAACGCTAATCCTGAAACG 596
consensus_7818#1      GGT--CTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCG 625
consensus_7818#3      GGT--CTGTATGCATCCGACCGATCGGCTCGTGACGACGCTGCTGGCGATCTGGAAGGCG 586
                           *                               *                      

consensus_7818#0      TAACGTTTNTGTACGTCNTTNGGGCACACTNGTGCCCGGAACGTNTCAANTAACNAANAN 668
consensus_7818#4      CATNGATTAGGGCC---------------------------------------------- 590
consensus_7818#2      TCTCGCAAGTGCCAAACGTGTTATCCTACGAAGGTGCAAAACGAAACTGTGAACGCTGGT 656
consensus_7818#1      GGCGCGGCCTACCTGCCGATCGATCCGACCTTCCCGCCGAACCGCATCCAGCACATACTG 685
consensus_7818#3      GGCGCGG----------------------------------------------------- 593
                                                                                  

consensus_7818#0      GTGGTTGGAGGAANAGCANTGTTGGAAACAAAGCCCGATTGGGNGGGTTCNAGNCCCGAC 728
consensus_7818#4      ------------------------------------------------------------
consensus_7818#2      AG---------------------------------------------------------- 658
consensus_7818#1      GGGGAGGCGAAGCCGGCGCTGGTCGTGTACGATGCCGACTACGACAATGCGGCCATCTTT 745
consensus_7818#3      ------------------------------------------------------------
                                                                                  

consensus_7818#0      GATNTAACTGCTGGGCGTTTGCGANGGCGCGCAATTGCNCCGTTGTGCGCCAGAGCATGG 788
consensus_7818#4      ------------------------------------------------------------
consensus_7818#2      ------------------------------------------------------------
consensus_7818#1      GGCAAGACGCCCGCGGTTAGCTATGCCGAGCTGCGCAAGCGGGCGAGCGACCTGAGCAAC 805
consensus_7818#3      ------------------------------------------------------------
                                                                                  

consensus_7818#0      GGGTTACTATGACCGGACCGANGGCGCCNGGGCAGGGATGTGCCGTATCCNAAACGNGGT 848
consensus_7818#4      ------------------------------------------------------------
consensus_7818#2      ------------------------------------------------------------
consensus_7818#1      GCCAACATCCGGCCGGAAGCGATGCTTGGCAAAGGCGAAGCGCAGCTCGCCCTCGTACTG 865
consensus_7818#3      ------------------------------------------------------------
                                                                                  

consensus_7818#0      AGTAGACAGTACNAGTAATATTGGGGAAGTTGGTGACGGCNCCGTNTAAGGGGGCGGATA 908
consensus_7818#4      ------------------------------------------------------------
consensus_7818#2      ------------------------------------------------------------
consensus_7818#1      TACACGTCGGGCAGTACCGGTGTGCCCGAAAGGTGTTCGGCTCAA--------------- 910
consensus_7818#3      ------------------------------------------------------------
                                                                                  

consensus_7818#0      TTANGNTGCGTGGGGATTAGGAGGGTAAGAAGGGANANCGGTGANGNGGCNN 960
consensus_7818#4      ----------------------------------------------------
consensus_7818#2      ----------------------------------------------------
consensus_7818#1      ----------------------------------------------------
consensus_7818#3      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)