cluster # 7821

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Anopheles gambiae
cluster # 7821 cluster # 7821 Sequences # 8 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7821#0 length = 991 sequences # 3
consensus_7821#1 length = 893 sequences # 1

consensus_7821#2 length = 827 sequences # 1
consensus_7821#3 length = 758 sequences # 2
consensus_7821#4 length = 678 sequences # 1

consensusID : consensus_7821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 991
fasta sequence

                              [GTTTAATGTATTGTGCAGCTAAATGTTGGTTTCAAAAACCAAACCGATCTGTTGTGAAAATTACCGTTTGCGAAACCATCTAATACGTGTGT-GGTGCTGCGCGCGGCAACGGAGACGAGATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTCCCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTCTGGCCTAAAATCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTCGCCCGGGTAAAGCTGTCTCATCGCTTCCGCCAGCTTGTACACGTACTCC-GGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCAGCTTCTCCGACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTAATGTAGCCGGTGCGCTTTTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGCAGCTTTCTTTGTTTTGGTGGGGGGTGTTTCGCTACG]

[+] EMBL CNS08DEU             [GTTTAATGTATTGTGCAGCTAAATGTTGGTTTCAAAAACCAAACCGATCTGTTGTGAAAATTACCGTTTGCGAAACCATCTAATACGTGTGT GGTGCTGCGCGCGGCAACGGAGACGAGATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTCCCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTCTGGCCTAAAATCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTCGCCCGGGTAAAGCTGTCTCATCGCTTCCGCCAGCTTGTACACGTACTCC GGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCAGCTTCTCCGACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTTTTTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTAATGTAGCCGGTGCGCTTTTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGGGGATTTAAGTAAACGAGTTAAATTTAGCGCCACTGT                                                                          ]
[-] EMBL CNS08DET             [                                                                                    ACGTGTGTGGGTG TGCGCGCGGCAACGGAGACGAGATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTCCCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTCTGGCCTACAATCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTCGCCCGGGTAAAGCTGTCTCATCGCTTCCGCCAGCTTGTACACGTACTCC GGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCAGCTTCTCCGACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTAATGTAGCCGGTGCGCTTTTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCGTCGCCCTCGAACG CTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGCAGCTTTCTTTGTTTTGGTGGGGGGTGTTTCGCTACG]
[-] EMBL BM578321             [                                                                                                                                                                                                                                                                                                        GCTCGCCCGGGTAAAGCTGCCTCATCGCTTCCGCCAGCTTGTACACGTACTCCGGGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCTGCTTCTCTGACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTGATGTAACCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCCTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAG AAAACTGTGTGCAGCTTTCTTTGTTGTGGTGGGGGGTTTTTCGCgg  ]




>consensus_7821#0
GTTTAATGTATTGTGCAGCTAAATGTTGGTTTCAAAAACCAAACCGATCTGTTGTGAAAA
TTACCGTTTGCGAAACCATCTAATACGTGTGTGGTGCTGCGCGCGGCAACGGAGACGAGA
TCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTCC
CACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTCT
GGCCTAAAATCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTCG
CCCGGGTAAAGCTGTCTCATCGCTTCCGCCAGCTTGTACACGTACTCCGGGTTTTTCCCA
CTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCG
GCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAAC
TGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTC
TCCCGGTGGTCAAGGTGGCTCAGTACCTGCAGCTTCTCCGACGCACCGATACGGTAGCCC
ATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGC
CGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTA
ATGTAGCCGGTGCGCTTTTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTAC
CCGAAGATCCAAATGTCTTGCTGGCCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGG
TTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTG
AAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGCAGCTT
TCTTTGTTTTGGTGGGGGGTGTTTCGCTACG

consensusID : consensus_7821#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 893
fasta sequence

                              [TTCAAAAAACCATACCGATCTATTGTGAAACATTACCGTTCGGAACGTGTTTGGTGCTGCGCGCGGCAACGGAGACGAGATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTCCCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTCTGGCCTACACTCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTCGCCCGGGTAAAGCTGCCTCATCGCTTCCGCCAGCTTGTACACGTACTCCGGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCTGCTTCTCTGACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTGATGTAACCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCCTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAG]

[-] EMBL BX606381             [TTCAAAAAACCATACCGATCTATTGTGAAACATTACCGTTCGGAACGTGTTTGGTGCTGCGCGCGGCAACGGAGACGAGATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTCCCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTCTGGCCTACACTCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTCGCCCGGGTAAAGCTGCCTCATCGCTTCCGCCAGCTTGTACACGTACTCCGGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTATCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCTGCTTCTCTGACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAGAAATCCTTTGATGTAACCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCCTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAG]




>consensus_7821#1
TTCAAAAAACCATACCGATCTATTGTGAAACATTACCGTTCGGAACGTGTTTGGTGCTGC
GCGCGGCAACGGAGACGAGATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGC
AAGGCTCGTTCCCCACTTCCCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCC
CATCCGTCGTCGGTGGCTCTGGCCTACACTCACGCTTTAGCAGCAACTGCTCCAGCTCGA
ACAAATGGTCATCCCGCTCGCCCGGGTAAAGCTGCCTCATCGCTTCCGCCAGCTTGTACA
CGTACTCCGGGTTTTTCCCACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGT
CCAGCGTGTCGTGCAGCCCGGCAAACGATGGATTGTCCTGCGTGGCCACGTACAGCAGTA
TCGGTTGCGGTTCGTTCAACTGTGCCGTGCACGGCGGGTAGGGATAAAACTTCACACAGT
GCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCTGCTTCTCTG
ACGCACCGATACGGTAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCA
AAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGA
AGCGCCGCAGAAATCCTTTGATGTAACCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCT
TCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGCCGTCTTCCTCGCCCT
CGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTG
CGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAG

consensusID : consensus_7821#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 827
fasta sequence

                              [AGCAGTATTGGGGTTATTTTAGCTTCCTCACTTGACTCGGTTNGCGCCCACCAATCCTAGTTTAACCAAAAGCACCAACGGTTTGAATGCCGGTGGTTTTGGCAGAGTTCTGCCTGCTGTNTCCGAAAGCATGGTTGACCACAGATGCCAACCCGGGGCCAGGTGTTTTAGAGGTATTTACTATATACCATCTTCTAACAACAANGNTAGCCACAGTATTTCAGATAAAGCCCNGTGTCGATTCTGCCCAGGGTTGGTCAGTATGGCTTGGCCTCTAGTTACACCATGCAAGGCATTGCGTGCGCAGAACNGCAACCAGNNATTACCAGTATTAGCACACAATGTCACCCACTACAACACATGTNCAGTATTTCACAGGAGNTCAGTACACAGAGTGTTACCCAATATGTCAACCACACAGGCCCAGGCCAGGTCACTGTGTGNCCCCAGATGGATCAGNATACATGTTTTGGAAGATAGCAGNCACAGCATTATATATATCCTTTTAGATGTAGCACAGGTGCAGCTTCATCCNTCNGAACGGGAATAGTCGCGCACTTCACATACGACGCGACTCCGTACCGCGTAAGATCCAAATGTCTTGTCTGGGTCGTCGTTGCGTGCAGCACACTTGCAGAACGCNTCTGCGGTATCCGNNTTTCCCGTGGGCCCCCTGTCGCATCAGTCGNGCGTACAACGCTTNCGCGGATTTATAGTAAACGTAGTGATAATTTAGCACCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGTTTTGGTGGGGTTTTTCGCTACGGCTTAACCTC]

[-] EMBL AL931782             [AGCAGTATTGGGGTTATTTTAGCTTCCTCACTTGACTCGGTTNGCGCCCACCAATCCTAGTTTAACCAAAAGCACCAACGGTTTGAATGCCGGTGGTTTTGGCAGAGTTCTGCCTGCTGTNTCCGAAAGCATGGTTGACCACAGATGCCAACCCGGGGCCAGGTGTTTTAGAGGTATTTACTATATACCATCTTCTAACAACAANGNTAGCCACAGTATTTCAGATAAAGCCCNGTGTCGATTCTGCCCAGGGTTGGTCAGTATGGCTTGGCCTCTAGTTACACCATGCAAGGCATTGCGTGCGCAGAACNGCAACCAGNNATTACCAGTATTAGCACACAATGTCACCCACTACAACACATGTNCAGTATTTCACAGGAGNTCAGTACACAGAGTGTTACCCAATATGTCAACCACACAGGCCCAGGCCAGGTCACTGTGTGNCCCCAGATGGATCAGNATACATGTTTTGGAAGATAGCAGNCACAGCATTATATATATCCTTTTAGATGTAGCACAGGTGCAGCTTCATCCNTCNGAACGGGAATAGTCGCGCACTTCACATACGACGCGACTCCGTACCGCGTAAGATCCAAATGTCTTGTCTGGGTCGTCGTTGCGTGCAGCACACTTGCAGAACGCNTCTGCGGTATCCGNNTTTCCCGTGGGCCCCCTGTCGCATCAGTCGNGCGTACAACGCTTNCGCGGATTTATAGTAAACGTAGTGATAATTTAGCACCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGTTTTGGTGGGGTTTTTCGCTACGGCTTAACCTC]




>consensus_7821#2
AGCAGTATTGGGGTTATTTTAGCTTCCTCACTTGACTCGGTTNGCGCCCACCAATCCTAG
TTTAACCAAAAGCACCAACGGTTTGAATGCCGGTGGTTTTGGCAGAGTTCTGCCTGCTGT
NTCCGAAAGCATGGTTGACCACAGATGCCAACCCGGGGCCAGGTGTTTTAGAGGTATTTA
CTATATACCATCTTCTAACAACAANGNTAGCCACAGTATTTCAGATAAAGCCCNGTGTCG
ATTCTGCCCAGGGTTGGTCAGTATGGCTTGGCCTCTAGTTACACCATGCAAGGCATTGCG
TGCGCAGAACNGCAACCAGNNATTACCAGTATTAGCACACAATGTCACCCACTACAACAC
ATGTNCAGTATTTCACAGGAGNTCAGTACACAGAGTGTTACCCAATATGTCAACCACACA
GGCCCAGGCCAGGTCACTGTGTGNCCCCAGATGGATCAGNATACATGTTTTGGAAGATAG
CAGNCACAGCATTATATATATCCTTTTAGATGTAGCACAGGTGCAGCTTCATCCNTCNGA
ACGGGAATAGTCGCGCACTTCACATACGACGCGACTCCGTACCGCGTAAGATCCAAATGT
CTTGTCTGGGTCGTCGTTGCGTGCAGCACACTTGCAGAACGCNTCTGCGGTATCCGNNTT
TCCCGTGGGCCCCCTGTCGCATCAGTCGNGCGTACAACGCTTNCGCGGATTTATAGTAAA
CGTAGTGATAATTTAGCACCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTG
TGGAGCTTTCTTTGTTTTGGTGGGGTTTTTCGCTACGGCTTAACCTC

consensusID : consensus_7821#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 758
fasta sequence

                              [ACCCACCGNGTTATCNTCCCCGGGGGTTGTTTTGTTNCCCCAACGTGTTCTGTGGCCCCCTAGNCTCGGGTACNNTCTCCCAAGTNATTCTTGGGTNCNCTGNCCNAATTTNCGTTCGGGTNCCCAGGGCNTGTTGTCGGGTNCCAGCCCCGGCCTGTGCNGCATGGACTTGTCCTTGCCGTGGCCACGTACANGCAGTTTTCGGTTGCGGTTCGGTTCANACTGTGCCGTGCACGTCGGGTAGGGATCNNACGTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCAGCTTCTCCGACGCTACCGATACGATAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAAAAATCCTTTGATGTAGCCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGTCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGATTGTGGTGGGGGTTTTTCGCTACGGCTGACACTCGTGGCGATCTGC]

[-] EMBL BX467259             [ACCCACCGNGTTATCNTCCCCGGGGGTTGTTTTGTTNCCCCAACGTGTTCTGTGGCCCCCTAGNCTCGGGTACNNTCTCCCAAGTNATTCTTGGGTNCNCTGNCCNAATTTNCGTTCGGGTNCCCAGGGCNTGTTGTCGGGTNCCAGCCCCGGCCTGTGCNGCATGGACTTGTCCTTGCCGTGGCCACGTACANGCAGTTTTCGGTTGCGGTTCGGTTCANACTGTGCCGTGCACGTCGGGTAGGGATCNNACGTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGTGGCTCAGTACCTGCAGCTTCTCCGACGCTACCGATACGATAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAAAAATCCTTTGATGTAGCCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGTCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGATTGTGGTGGGGGTTTTTCGCTACGGCTGACACTCGTGGCGATCTGC]
[-] EMBL AL933342             [                                                                                                                                                                                                                                                                                                                                 CCGACGC ACCGATACGATAGCCCATGCCCCACACCTTCGATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGG CAGGCCGGTCCTGTGTGCCCCGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAAAAATCCTTTGATGTAGCCGGTGCGCTTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGTCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACTGTGGGATGTAGAAGAGAGCTGCntaacct                                                                     ]




>consensus_7821#3
ACCCACCGNGTTATCNTCCCCGGGGGTTGTTTTGTTNCCCCAACGTGTTCTGTGGCCCCC
TAGNCTCGGGTACNNTCTCCCAAGTNATTCTTGGGTNCNCTGNCCNAATTTNCGTTCGGG
TNCCCAGGGCNTGTTGTCGGGTNCCAGCCCCGGCCTGTGCNGCATGGACTTGTCCTTGCC
GTGGCCACGTACANGCAGTTTTCGGTTGCGGTTCGGTTCANACTGTGCCGTGCACGTCGG
GTAGGGATCNNACGTTCACACAGTGCCGATCGTAGCCGTTCTTCTCCCGGTGGTCAAGGT
GGCTCAGTACCTGCAGCTTCTCCGACGCTACCGATACGATAGCCCATGCCCCACACCTTC
GATTCCGGGTCGTCCGAGTGTACCAAAGTCACCACACGGCCAGGCCGGTCCTGTGTGCCC
CGATGGTCGATACTGTTTTGGAAGAAGCGCCGCAAAAATCCTTTGATGTAGCCGGTGCGC
TTCTCCTCGAACGGGAAGTCGGCCTTCCATACGAGCGATCCGTACCCGAAGATCCAAATG
TCTTGCTGGTCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCC
TCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCGCCACT
GTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGATTGTGGTG
GGGGTTTTTCGCTACGGCTGACACTCGTGGCGATCTGC

consensusID : consensus_7821#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [GGTCCNGCANTGCGTCGTCCNGCGTGGTCTGTGCTNGGCCCGGCTTTGCGTNTGTGTTTTGTCCTGCGGTGGGCCTACCGTTGCNGTCANTGTATCCGGTNTTGCCGGTTTTCGTGTTCACTGTTCCCGTTGCATCGGCNGGTGTTAGGGATTANTTCACACAGTTCNCGATCCGGTAGCCTTCTTCTCCCGGTGGTTCAANGTGGTCTCAGTACCTTGCAGCGTTTCTCCGNACGCACCGATACGATAGCCCATGGCCCCACACCTTCGANTCCCGGGTCGGTCCGAGTGTACCATAAGTCACCTACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGTATACTGTTTTGGAAGAAGCTGCCGCAAAAATCCTTTGATGTAGCCGGTGCGCTTCTCCTCGATACGGGAATCGGCCTNTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGTCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCAGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGTTGTGGTGGGGGTTTTTCGCTACGGCCTTGTGTCAAAACTAAACCTCGGG]

[-] EMBL AL694535             [GGTCCNGCANTGCGTCGTCCNGCGTGGTCTGTGCTNGGCCCGGCTTTGCGTNTGTGTTTTGTCCTGCGGTGGGCCTACCGTTGCNGTCANTGTATCCGGTNTTGCCGGTTTTCGTGTTCACTGTTCCCGTTGCATCGGCNGGTGTTAGGGATTANTTCACACAGTTCNCGATCCGGTAGCCTTCTTCTCCCGGTGGTTCAANGTGGTCTCAGTACCTTGCAGCGTTTCTCCGNACGCACCGATACGATAGCCCATGGCCCCACACCTTCGANTCCCGGGTCGGTCCGAGTGTACCATAAGTCACCTACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGTATACTGTTTTGGAAGAAGCTGCCGCAAAAATCCTTTGATGTAGCCGGTGCGCTTCTCCTCGATACGGGAATCGGCCTNTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGTCGTCTTCGTCGCCCTCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTTGCGGATTTAAGTAAACGAGTGAAATTTAGCAGCCACTGTGGGATGTAGAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGTTGTGGTGGGGGTTTTTCGCTACGGCCTTGTGTCAAAACTAAACCTCGGG]




>consensus_7821#4
GGTCCNGCANTGCGTCGTCCNGCGTGGTCTGTGCTNGGCCCGGCTTTGCGTNTGTGTTTT
GTCCTGCGGTGGGCCTACCGTTGCNGTCANTGTATCCGGTNTTGCCGGTTTTCGTGTTCA
CTGTTCCCGTTGCATCGGCNGGTGTTAGGGATTANTTCACACAGTTCNCGATCCGGTAGC
CTTCTTCTCCCGGTGGTTCAANGTGGTCTCAGTACCTTGCAGCGTTTCTCCGNACGCACC
GATACGATAGCCCATGGCCCCACACCTTCGANTCCCGGGTCGGTCCGAGTGTACCATAAG
TCACCTACACGGCCAGGCCGGTCCTGTGTGCCCCGATGGTCGTATACTGTTTTGGAAGAA
GCTGCCGCAAAAATCCTTTGATGTAGCCGGTGCGCTTCTCCTCGATACGGGAATCGGCCT
NTCCATACGAGCGATCCGTACCCGAAGATCCAAATGTCTTGCTGGTCGTCTTCGTCGCCC
TCGAACGCCTGCGGTATCCGGTTTCCGTGGGCCGCCTCGCTCATCGTGCGTACAAGCTTT
GCGGATTTAAGTAAACGAGTGAAATTTAGCAGCCACTGTGGGATGTAGAAGAGAGCTGCC
GAAGAAAAACTGTGTGGAGCTTTCTTTGTTGTGGTGGGGGTTTTTCGCTACGGCCTTGTG
TCAAAACTAAACCTCGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7821#0      GTTTAATGTATTGTGCAGCTAAATGTTGGTTTCAAAAACCAAACCGATCTGTTGTGAAA- 59
consensus_7821#1      -----------------------------TTCAAAAAACCATACCGATCTATTGTGAAAC 31
consensus_7821#4      ------------------------------------------------------------
consensus_7821#3      ------------------------------------------------------------
consensus_7821#2      ------------------------------------------------------------
                                                                                  

consensus_7821#0      ATTACCGTTTGCGAAACCATCTAATACGTGTGTGGTGCTGCGCGCGGCAACGGAGACGAG 119
consensus_7821#1      ATTACCGTTCGGAA------------CGTGTTTGGTGCTGCGCGCGGCAACGGAGACGAG 79
consensus_7821#4      ------------------------------------------------------------
consensus_7821#3      ------------------------------------------------------------
consensus_7821#2      ------------------------------------------------------------
                                                                                  

consensus_7821#0      ATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTC 179
consensus_7821#1      ATCACCGGCTAATTATTGTGCACTGCCAGCATATGCACCGCAAGGCTCGTTCCCCACTTC 139
consensus_7821#4      ------------------------------------------------------------
consensus_7821#3      ------------------------------------------------------------
consensus_7821#2      ------------------------------------------------------------
                                                                                  

consensus_7821#0      CCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTC 239
consensus_7821#1      CCACTAGCCTTCCTTACTAGCTTCCGACCGGCTGGTATCCCCATCCGTCGTCGGTGGCTC 199
consensus_7821#4      ------------------------------------------------------------
consensus_7821#3      ------------------------------------------------------------
consensus_7821#2      ------------------------------------------------------------
                                                                                  

consensus_7821#0      TGGCCTAAAATCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTC 299
consensus_7821#1      TGGCCTACACTCACGCTTTAGCAGCAACTGCTCCAGCTCGAACAAATGGTCATCCCGCTC 259
consensus_7821#4      ------------------------------------------------------------
consensus_7821#3      ------------------ACCCACCGNGTTATCNTCCCCGG--GGGTTGTTTTGTTNCCC 40
consensus_7821#2      --------------AGCAGTATTGGGGTTATTTTAGCTTCC-TCACTTGACTCGGTTNGC 45
                                                                                  

consensus_7821#0      GCCCGGGTAAAGCTGTCTCATCGCTTCCGCCAGCTTGTAC-ACGTACTCCGGGTTTTTCC 358
consensus_7821#1      GCCCGGGTAAAGCTGCCTCATCGCTTCCGCCAGCTTGTAC-ACGTACTCCGGGTTTTTCC 318
consensus_7821#4      --------------------------------------------------GGTCCNGCAN 10
consensus_7821#3      CAACGTGTTCTGTGGCCCCCTAGNCTCGGGTACNNTCTCCCAAGTNATTCTTGGGTNCNC 100
consensus_7821#2      GCCCACCAATCCTAGTTTAACCAAAAGCACCAACGGTTTGAATGCCGGTGGTTTTGGCAG 105
                                                                                  

consensus_7821#0      CACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCC 418
consensus_7821#1      CACTCTGCCCAGCGGACCCCAGTATCTGGTCCGCAATCTCGTCCAGCGTGTCGTGCAGCC 378
consensus_7821#4      TGCGTCGTCCNGCGTGGTCT-GTGCTNGGCCCGGCTTTGCGTNT---GTGTTTTGTCCTG 66
consensus_7821#3      TGNCCNAATTTNCGTTCGGGTNCCCAGGGCNTGTTGTCGGGTNCCA-GCCCCGGCCTGTG 159
consensus_7821#2      AGTTCTGCCTGCTGTNTCCGAAAGCATGGTTGACCACAGATGCCAACCCGGGGCCAGGTG 165
                                   *             **                               

consensus_7821#0      CGGCAAACG-ATGGATTGTCCTGCGTGGCCACGTAC-AGCAGTAT-CGGTTGCGGTTC-G 474
consensus_7821#1      CGGCAAACG-ATGGATTGTCCTGCGTGGCCACGTAC-AGCAGTAT-CGGTTGCGGTTC-G 434
consensus_7821#4      CGGTGGGCC-TACCGTTGC----NGTCANTGTATCC-GGTNTTGC-CGGTTTTCGT---G 116
consensus_7821#3      CNGCATGGA-CTTGTCCTTGC--CGTGGCCACGTACANGCAGTTTTCGGTTGCGGTTCGG 216
consensus_7821#2      TTTTAGAGGTATTTACTATATACCATCTTCTAACAACAANGNTAG-CCACAGTATTTCAG 224
                                               *                *   *        *   *

consensus_7821#0      TTCAA---CTGTGCCG-T-GCA-CGGCGGGTAG-GGATAAAACTTCACACAGTGCC-GAT 526
consensus_7821#1      TTCAA---CTGTGCCG-T-GCA-CGGCGGGTAG-GGATAAAACTTCACACAGTGCC-GAT 486
consensus_7821#4      TTCAC---TGTTCCCG-TTGCATCGGCNGGTGTTAGGGATTANTTCACACAGTTCNCGAT 172
consensus_7821#3      TTCANA--CTGTGCCG-T-GCA-CGTCGGGTAGGGATCNNACGTTCACACAGTGCC-GAT 270
consensus_7821#2      ATAAAGCCCNGTGTCGATTCTGCCCAGGGTTGGTCAGTATGGCTTGGCCTCTAGTTACAC 284
                       * *       *  ** *     *    * *            **  *          * 

consensus_7821#0      C--GTA-GCCGTTCTTCTCCCGGTGGT-CAA---GGTGG-CTCAGTACCT----GCAGCT 574
consensus_7821#1      C--GTA-GCCGTTCTTCTCCCGGTGGT-CAA---GGTGG-CTCAGTACCT----GCTGCT 534
consensus_7821#4      CCGGTA-GCC-TTCTTCTCCCGGTGGTTCAA---NGTGGTCTCAGTACCTT---GCAGCG 224
consensus_7821#3      C--GTA-GCCGTTCTTCTCCCGGTGGT-CAA---GGTGG-CTCAGTACCT----GCAGCT 318
consensus_7821#2      CATGCAAGGCATTGCGTGCGCAGAACNGCAACCAGNNATTACCAGTATTAGCACACAATG 344
                      *  * * * * **     * * *     ***           *****        *    

consensus_7821#0      TCTCC---GACGC-ACCGATACGGTAGCCCATG-CCCCACACCTTCGATTCC-GGGTCG- 627
consensus_7821#1      TCTCT---GACGC-ACCGATACGGTAGCCCATG-CCCCACACCTTCGATTCC-GGGTCG- 587
consensus_7821#4      TTTCTCCGNACGC-ACCGATACGATAGCCCATGGCCCCACACCTTCGANTCCCGGGTCGG 283
consensus_7821#3      TCTCC---GACGCTACCGATACGATAGCCCATG-CCCCACACCTTCGATTCC-GGGTCG- 372
consensus_7821#2      TCACCCACTACAACACATGTNCAGTATTTCACA-----GGAGNTCAGTACACAGAGTGTT 399
                      *  *     **   **   * *  **   **         *  *  *    * * **   

consensus_7821#0      TCCGAGTGTACCA-AAGTCACC-ACACGGCCAGGCC-GGTC-CTGTGTGCCCC--GATGG 681
consensus_7821#1      TCCGAGTGTACCA-AAGTCACC-ACACGGCCAGGCC-GGTC-CTGTGTGCCCC--GATGG 641
consensus_7821#4      TCCGAGTGTACCATAAGTCACCTACACGGCCAGGCC-GGTC-CTGTGTGCCCC--GATGG 339
consensus_7821#3      TCCGAGTGTACCA-AAGTCACC-ACACGGCCAGGCC-GGTC-CTGTGTGCCCC--GATGG 426
consensus_7821#2      ACCCAATATGTCA---ACCAC--ACAGGCCCAGGCCAGGTCACTGTGTGNCCCCAGATGG 454
                       ** * * *  **     ***  *** * ******* **** ******* ***  *****

consensus_7821#0      TC--G-ATAC-TGTTTTGGAAGA-AGC-GCCGCAGAA--------ATCCTTT--AATGTA 725
consensus_7821#1      TC--G-ATAC-TGTTTTGGAAGA-AGC-GCCGCAGAA--------ATCCTTT--GATGTA 685
consensus_7821#4      TC--GTATAC-TGTTTTGGAAGA-AGCTGCCGCAAAA--------ATCCTTT--GATGTA 385
consensus_7821#3      TC--G-ATAC-TGTTTTGGAAGA-AGC-GCCGCAAAA--------ATCCTTT--GATGTA 470
consensus_7821#2      ATCAGNATACATGTTTTGGAAGATAGCAGNCACAGCATTATATATATCCTTTTAGATGTA 514
                          * **** ************ *** * * **  *        *******   *****

consensus_7821#0      GCC--GGTGCG----CTTTTCCTCGAACGGGAA--GTCG-GC-CTT-CCATACGA-GCGA 773
consensus_7821#1      ACC--GGTGCG----CTTCTCCTCGAACGGGAA--GTCG-GC-CTT-CCATACGA-GCGA 733
consensus_7821#4      GCC--GGTGCG----CTTCTCCTCGATACGGGA--ATCG-GC-CTNTCCATACGA-GCGA 434
consensus_7821#3      GCC--GGTGCG----CTTCTCCTCGAACGGGAA--GTCG-GC-CTT-CCATACGA-GCGA 518
consensus_7821#2      GCACAGGTGCAGCTTCATCCNTCNGAACGGGAATAGTCGCGCACTTCACATACGACGCGA 574
                       *   *****     * *      **   ** *   *** ** **   ******* ****

consensus_7821#0      -TCCGTACC-CG-AAGATCCAAATGTCTTGCT--GGCCGTCTTCGT------CGCCCTCG 822
consensus_7821#1      -TCCGTACC-CG-AAGATCCAAATGTCTTGCT--GGCCGTCTTCCT------CGCCCTCG 782
consensus_7821#4      -TCCGTACC-CG-AAGATCCAAATGTCTTGCT--GGTCGTCTTCGT------CGCCCTCG 483
consensus_7821#3      -TCCGTACC-CG-AAGATCCAAATGTCTTGCT--GGTCGTCTTCGT------CGCCCTCG 567
consensus_7821#2      CTCCGTACCGCGTAAGATCCAAATGTCTTGTCTGGGTCGTCGTTGCGTGCAGCACACTTG 634
                       ******** ** *****************    ** **** *         * * ** *

consensus_7821#0      AA-----CGCCTGCGGTATCCGGTTT--CCGTGGGCCGCCTCGCTCATC----GTGCGTA 871
consensus_7821#1      AA-----CGCCTGCGGTATCCGGTTT--CCGTGGGCCGCCTCGCTCATC----GTGCGTA 831
consensus_7821#4      AA-----CGCCTGCGGTATCCGGTTT--CCGTGGGCCGCCTCGCTCATC----GTGCGTA 532
consensus_7821#3      AA-----CGCCTGCGGTATCCGGTTT--CCGTGGGCCGCCTCGCTCATC----GTGCGTA 616
consensus_7821#2      CAGAACGCNTCTGCGGTATCCGNNTTTCCCGTGGGCCCCCTGTCGCATCAGTCGNGCGTA 694
                       *     *  ************  **  ********* ***  * ****    * *****

consensus_7821#0      CAA-GCTTT-GCGGATTTA-AGTAAACG-AGTGA-AATTTAGC-GCCACTGTGGGATGTA 925
consensus_7821#1      CAA-GCTTT-GCGGATTTA-AGTAAACG-AGTGA-AATTTAGC-GCCACTGTGGGATGTA 885
consensus_7821#4      CAA-GCTTT-GCGGATTTA-AGTAAACG-AGTGA-AATTTAGCAGCCACTGTGGGATGTA 587
consensus_7821#3      CAA-GCTTT-GCGGATTTA-AGTAAACG-AGTGA-AATTTAGC-GCCACTGTGGGATGTA 670
consensus_7821#2      CAACGCTTNCGCGGATTTATAGTAAACGTAGTGATAATTTAGC-ACCACTGTGGGATGTA 753
                      *** ****  ********* ******** ***** ********  ***************

consensus_7821#0      GAAGAGAGCTGCCGAAGAAAAACTGTGTGCAGCTTTCTTTGTTTTGGTGGGGGGTGTTTC 985
consensus_7821#1      GAAGAGAG---------------------------------------------------- 893
consensus_7821#4      GAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGTTGTGGTGGGGG-TTTTTC 646
consensus_7821#3      GAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGATTGTGGTGGGGGTTTTTC 730
consensus_7821#2      GAAGAGAGCTGCCGAAGAAAAACTGTGTGGAGCTTTCTTTGTTTTGGTGGGG--TTTTTC 811
                      ********                                                    

consensus_7821#0      GCTACG-------------------------- 991
consensus_7821#1      --------------------------------
consensus_7821#4      GCTACGGCCTTGTGTCAAAACTAAACCTCGGG 678
consensus_7821#3      GCTACGGCTGACACTCGTGGCGATCTGC---- 758
consensus_7821#2      GCTACGGCTTAACCTC---------------- 827