Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7823 cluster # 7823       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7823#0 length = 2270 sequences # 6  
consensus_7823#1 length = 664 sequences # 1  
consensus_7823#2 length = 619 sequences # 1  

consensusID : consensus_7823#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2270
fasta sequence
                              [CCGCCCACGCGTCCGCGGGCGGTTAAGTGAACTTATTCTACAATTTGTTTTCTTACCTAAAGTTGACACTGGTAGAAATGCTTACGTTTAAAATCCAGTTTCATTCCGATACAATAGCAAACTATCTGATTTGAGATTTACAAAAAGAAGCGTCCTATTCTCATGTACTCCATCGTTATTGCGGTATTACTTTATCCTAAACTTGTACGACACAGTTCTGTCTACAGAACAGCATATCCAAGAGAATGTTGCTAGTATTTGTAACGAAGGGAGTAGCTTCATTCGAGCGGTAGGCAAACCTATACTTAAACTAGCCCAATCTATCTGCTAGCAAACGCAATATTGCTATTAACAACCTAAGCAGCTTAACCTACTATTAACCCGAACAAATGGAAAATAAAATGATCAGCGATATGGCTTATAAAGCTTTACCTGTAGTGTATCTATCCGCTGGCTGTGCTAGGCTCCCCGTACCGGAAAAAAGCACGCCGAAATAGCTATGAAAGTATTGCTTTGAAATGGTTGCGTAGCAGAAGCGGAAACACAGAACGGGAGTCGCACACGATTAGAGGTACCAAGCAGTCAGTTGCAAGTAATCACAAATAAAAAGTGTAGTTTAAAAGCTGCAACTGTAGTGAATAGTATAAATTAGCAGTACTGCACAAATGTAGTTGCGAATGGCCCTGTATGGAGCAGCAATGCAAATGATCCAAATTCCCGCGAGATAACAGGCCGATCTAATGTACTTAATTTAAAAAAAAACGATAAACGTCTAACAATACCAGCCTATCAATCGTTAGCAATTGCAAGCGATACTGAAATTTGCTGTTGTTTGGTTTTGCTGAAATGAAACTAACCGGCAAGATGGTCGTAACCAAATAAGAAATCTGGCAAACAAACCTGTTCAACTTCTGGCAGTCGTGTCTAAAACGTGGAAAATTGAAAAGAAAATATAGCAAACGTATTGTGATTACTAATATATACAACTATTAGCATAAAATTATGGTAATGAAATAAGAAGGAGCAAAGTAAAGGAAACATTGAAAACAAATTTAACAATTTGATGAAATGAATTAAATTACGAAAGAAGTATGCAGCACACGAGAAATCCTTCAAACTACAAACGAAGAAAAAAAACATCTCAAATGAAAGGACACAACATTGACAATGAACACGAACGTTCTTGCGTGCCTGTTCTAGTTAATTAAGCGTGCAAATGCTACGCAAAAGTATGCTACGCCTGTCCTGTAGAAACTTTTCTGTCTATTTAAATTGTTGTCGTTTTAGGTTCAGCTGACGATTAGAGAGAAAACAGCAGCAGTAATAGCGAATGTAAATTCAAATGAAATCATCATATCCTTGAGTTTGATGTATTTGCGCTTGGATTATATTTTGTACAGCAATTAATTTTACACAGACGTACATTTTACAGCTTTTGCTTGTAGATATGTGTAAATATATGATAGTAATGAAGGTGTTTAACCTTCCTCGTTTTGTTTTACGCGATCGCCCTTTGAAGAAGTTGTTCAAGTTGGTCGATGGTCTATAAAATTGTTTTTTTTTGCCGTTTGTCAAATAAGAAAATGAGCCGCATGATTGAAACTAAATCAATGACGAAGTAATGGGGATAAGCTGTGTCTCAAAACACAATTTCACTACAA-AATACAGAAACAT--GTGAATTCTGCTTTGCTCTGATAATGCAAGTAGCGCTGATAGATAAATACAATTACTTCTACTGTCTATCAAATAATGTCATCAACAGATTGTCCAAAGTTTCAATGCATTTGATGCATTTAGTTTGAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGTGCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATTTCGAAGACATATCAATTTTCTATCCACTTTAGATGATGCAAACACCTACTGGACGCTTGCTACTAGTATATGAATGACCGAGACTAATTTACGAGTCAAAGCAAAATTAAACTCTCCCGAAATTCAGCAAACGAACGACACAGGTATACACTTATATACACCGAAAAGAGCTTTTCTTCGTTGGATTCCCAANATCTGGGCTCCCCCGGTTTTGTCAAAGCACTTATTGAACTGTTGNNTATACACAAGTTTACCATTGGGGCAATAGCGCTCTCAAGCATGCAAACTGACTGGAGCACTGTTATTGGATAGCTTCTCATCATTGGATGTGCACACATAATACATTACAAATGTAATAG]

[+] EMBL BM632339             [CCGCCCACGCGTCCGCGGGCGGTTAAGTGAACTTATTCTACAATTTGTTTTCTTACCTAAAGTTGACACTGGTAGAAATGCTTACGTTTAAAATCCAGTTTCATTCCGATACAATAGCAAACTATCTGATTTGAGATTTACAAAAAGAAGCGTCCTATTCTCATGTACTCCATCGTTATTGCGGTATTACTTTATCCTAAACTTGTACGACACAGTTCTGTCTACAGAACAGCATATCCAAGAGAATGTTGCTAGTATTTGTAACGAAGGGAGTAGCTTCATTCGAGCGGTAGGCAAACCTATACTTAAACTAGCCCAATCTATCTGCTAGCAAACGCAATATTGCTATTAACAACCTAAGCAGCTTAACCTACTATTAACCCGAACAAATGGAAAATAAAATGATCAGCGATATGGCTTATAAAGCTTTACCTGTAGTGTATCTATCCGCTGGCTGTGCTAGGCTCCCCGTACCCGAAAAAAGCACGCCGAAATAGCTATGAAAGTATTGCTTTGAAATGGTTGCGTAGCAGAAGCGGAAACACAGAACGGGAGTCGCACACGATTAGAGGTACCAAGCAGTCAGTTGCAAGTAATCACAAATAAAAAGTGTAGTTTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX620989             [                                                                                                                                                                 CATGTACTCCATCGTTATTGCGGTATTACTTTATCCTAAACTTGTACGACACATTTATGTCTTCAGAACAGCATATCCAAGAGAATGTTGCTAGNATTTGTAACGAAGGGAGTAGCTTCATTCGAGCGGTAGGCAAACCTATACTTAAACTAGCCCAATCTATCTGCTAGCAAACGCAATATTGCTATTAACAACCTAAGCAGCTTAACCTACTATTAACCCGAACAAATGGAAAATAAAATGATCAGCGATATGGCTTATAAAGCTTTACCTGTAGTGTATCTATCCGCTGGCTGTGCTAGGCTCCCCGTACCGGAAAAAAGCACGCCGAAATAGCTATGGAAGTATTGCTTTGAAATGGTTGCGTAGCAGGAGCGGAAACACGGAACGGGAGTCGCACACGATTAGAGGTACCAAGCAGTCAGTTGCAAGTAATCACAAATAAAAAGTGTAGTTTAAAAGCTGCAACTGTAGTGAATAGTATAAATTAGCAGTACTGCACAAATGTAGTTGCGAATGGCCCTGTATGGAGCAGCAATGCAAATGATCCAAATTCCCGCGAGATAACAGGCCGATCTAATGTACTTAATTTAAAAAAAAACGATAAACGTCTAACAATACCAGCCTATCAATCGTTAGCAATTGCAAGCGATACTGAAATTTGCTGNTGTTTGGTTTTGCTG AATGAAACTAACCGGCAAGATGGTCGT ACCAAATAAG AATCTGGCAAACAAACCTGGTCCACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM648463             [                                                                                                                                                                                                                          ccgCTACAGAACAGCATATCCAAGAGAATGTTGCTAGTATTTGTAACGAAGGGAGTAGCTTCATTCGAGCGGTAGGCAAACCTATACTTAAACTAGCCCAATCTATCTGCTAGCAAACGCAATATTGCTATTAACAACCTAAGCAGCTTAACCTACTATTAACCCGAACAAATGGAAAATAAAATGATCAGCGATATGGCTTATAAAGCTTTACCTGTAGTGTATCTATCCGCTGGCTGTGCTAGGCTCCCCGTACCGGAAAAAAGCACGCCGAAATAGCTATGAAAGTATTGCTTTGAAATGGTTGCGTAGCAGAAGCGGAAACACAGAACGGGAGTCGCACACGATTAGAGGTACCAAGCAGTCAGTTGCAAGTAATCACAAATAAAAAGTGTAGTTTAAAAGCTGCAACTGTAGTGAATAGTATAAATTAGCAGTACTGCACAAATGTAGTTGCGAATGGCCCTGTATGGAGCAGCAATGCAAATGATCCAAATTCCCGCGAGATAACAGGCCGATCTAATGTACTTAA TTGAAAAAAAACGATAAACGTCTAACAATACCAGCCTATCAATCGTTAGCAATTGCAAGCGATACTGAAATTTGCTGTTGTTTGGTTTTGCTGAAATGAAACTAACCGGCAAGATGGTCGTAACCAAATAAGAAATCTGGCAAACAAACCTGTTCAACTTCTGGCAGTCGTGTCTAAAACGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM634152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGGCCTATCAATCGTTAGCAATTGCAAGCGATACTGAAATTTGCTGTTGTTTGGTTTTGCTGAAATGAAACTAACCGGCAAGATGGTCGTAACCAAATAAGAAATCTGGCAAACAAACCTGTTCAACTTCTGGCAGTCGTGTCTAAAACGTGGAAAATTGAAAAGAAAATATAGCAAACGTATTGTGATTACTAATATATACAACTATTAGCATAAAATTATGGTAATGAAATAAGAAGGAGCAAAGTAAAGGAAACATTGAAAACAAATTTAACAATTTGATGAAATGAATTAAATTACGAAAGAAGTATGCAGCACACGAGAAATCCTTCAAACTACAAACGAAGAAAAAAAACATCTCAAATGAAAGGACACAACATTGACAATGAACACGAACGTTCTTGCGTGCCTGTTCTAGTTAATTAAGCGTGCAAATGCTACGCAAAAGTATGCTACGCCTGTCCTGTAGAAACTTTTCTGTCTATTTAAATTGTTGTCGTTTTAGGTTCAGCTGACGATTAGAGAGAAAACAGCAGCAGTAATAGCGAATGTAAATTCAAATGAAATCATCATATCCTTGAGTTTGATGTATTTGCGCTTGGATTATATTTTGTACAGCAATTAATTTTACACAGACGTACATTTTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM627131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgATTTAAATTGCTGTCGTTTTAGGTTCAGCTGGCGATTAGAGAGAAAACAGCAGCAGTAATAGCGAATGTAAATTCAAATGAAATCATCATATCCTTGAGTTTGATGTATTTGCGCTTGGATTATATTTTGTACAGCAATTAATTTTACACAGACGTACATTTTACAGCTTTTGCTTGTAGATATGTGTAAATATATGATAGTAATGAAGGTGTTTAACCTTCCTCGTTTTGTTTTACGCGATCGCCCTTTGAAGAAGTTGTTCAAGTTGGTCGATGGTCTATAAAATTGTTTTTTTTTGCCGTTTGTCAAATAAGAAAATGAGCCGCATGATTGAAACTAAATCAATGACGAAGTAATGGGGATAAGCTGTGTCTCAAAACACAATTTCACTACAA AATACAGAAACAT  GTGAATTCTGCTTTGCTCTGATAATGCAAGTAGCGCTGATAGATAAATACAATTACTTCTACTGTCTATCAAATAATGTCATCAACAGATTGTCCAAAGTTTCAATGCATTTGATGCATTTAGTTTGAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGTGCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATTTCGAAGACATATCAATTTTCTATCCACTTTAGATGATGCA                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX468463             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gcCAAGAATTCGGCACGATGGGTGAA TCTGCTTTGCTCTGATAATGCAAGTAGCGCTGATAGATAAATACAATTACTTCTACTGTCTATCAAATAATGTCATCAACAGATTGTCCAAAGTTTCAATGCATTTGATGCATTTAGTTTGAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGTGCACCTGGCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATTTCGAAGACATATCAATTTTCTATCCACTTTAGATGATGCAAACACCTACTGGACGCTTGCTACTAGTATATGAATGACCGAGACTAATTTACGAGTCAAAGCAAAATTAAACTCTCCCGAAATTCAGCAAACGAACGACACAGGTATACACTTATATACACCGAAAAGAGCTTTTCTTCGTTGGATTCCCAANATCTGGGCTCCCCCGGTTTTGTCAAAGCACTTATTGAACTGTTGNNTATACACAAGTTTACCATTGGGGCAATAGCGCTCTCAAGCATGCAAACTGACTGGAGCACTGTTATTGGATAGCTTCTCATCATTGGATGTGCACACATAATACATTACAAATGTAATAG]


>consensus_7823#0 CCGCCCACGCGTCCGCGGGCGGTTAAGTGAACTTATTCTACAATTTGTTTTCTTACCTAA AGTTGACACTGGTAGAAATGCTTACGTTTAAAATCCAGTTTCATTCCGATACAATAGCAA ACTATCTGATTTGAGATTTACAAAAAGAAGCGTCCTATTCTCATGTACTCCATCGTTATT GCGGTATTACTTTATCCTAAACTTGTACGACACAGTTCTGTCTACAGAACAGCATATCCA AGAGAATGTTGCTAGTATTTGTAACGAAGGGAGTAGCTTCATTCGAGCGGTAGGCAAACC TATACTTAAACTAGCCCAATCTATCTGCTAGCAAACGCAATATTGCTATTAACAACCTAA GCAGCTTAACCTACTATTAACCCGAACAAATGGAAAATAAAATGATCAGCGATATGGCTT ATAAAGCTTTACCTGTAGTGTATCTATCCGCTGGCTGTGCTAGGCTCCCCGTACCGGAAA AAAGCACGCCGAAATAGCTATGAAAGTATTGCTTTGAAATGGTTGCGTAGCAGAAGCGGA AACACAGAACGGGAGTCGCACACGATTAGAGGTACCAAGCAGTCAGTTGCAAGTAATCAC AAATAAAAAGTGTAGTTTAAAAGCTGCAACTGTAGTGAATAGTATAAATTAGCAGTACTG CACAAATGTAGTTGCGAATGGCCCTGTATGGAGCAGCAATGCAAATGATCCAAATTCCCG CGAGATAACAGGCCGATCTAATGTACTTAATTTAAAAAAAAACGATAAACGTCTAACAAT ACCAGCCTATCAATCGTTAGCAATTGCAAGCGATACTGAAATTTGCTGTTGTTTGGTTTT GCTGAAATGAAACTAACCGGCAAGATGGTCGTAACCAAATAAGAAATCTGGCAAACAAAC CTGTTCAACTTCTGGCAGTCGTGTCTAAAACGTGGAAAATTGAAAAGAAAATATAGCAAA CGTATTGTGATTACTAATATATACAACTATTAGCATAAAATTATGGTAATGAAATAAGAA GGAGCAAAGTAAAGGAAACATTGAAAACAAATTTAACAATTTGATGAAATGAATTAAATT ACGAAAGAAGTATGCAGCACACGAGAAATCCTTCAAACTACAAACGAAGAAAAAAAACAT CTCAAATGAAAGGACACAACATTGACAATGAACACGAACGTTCTTGCGTGCCTGTTCTAG TTAATTAAGCGTGCAAATGCTACGCAAAAGTATGCTACGCCTGTCCTGTAGAAACTTTTC TGTCTATTTAAATTGTTGTCGTTTTAGGTTCAGCTGACGATTAGAGAGAAAACAGCAGCA GTAATAGCGAATGTAAATTCAAATGAAATCATCATATCCTTGAGTTTGATGTATTTGCGC TTGGATTATATTTTGTACAGCAATTAATTTTACACAGACGTACATTTTACAGCTTTTGCT TGTAGATATGTGTAAATATATGATAGTAATGAAGGTGTTTAACCTTCCTCGTTTTGTTTT ACGCGATCGCCCTTTGAAGAAGTTGTTCAAGTTGGTCGATGGTCTATAAAATTGTTTTTT TTTGCCGTTTGTCAAATAAGAAAATGAGCCGCATGATTGAAACTAAATCAATGACGAAGT AATGGGGATAAGCTGTGTCTCAAAACACAATTTCACTACAAAATACAGAAACATGTGAAT TCTGCTTTGCTCTGATAATGCAAGTAGCGCTGATAGATAAATACAATTACTTCTACTGTC TATCAAATAATGTCATCAACAGATTGTCCAAAGTTTCAATGCATTTGATGCATTTAGTTT GAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGTGCACCTGCC AAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATTTCGAAGACA TATCAATTTTCTATCCACTTTAGATGATGCAAACACCTACTGGACGCTTGCTACTAGTAT ATGAATGACCGAGACTAATTTACGAGTCAAAGCAAAATTAAACTCTCCCGAAATTCAGCA AACGAACGACACAGGTATACACTTATATACACCGAAAAGAGCTTTTCTTCGTTGGATTCC CAANATCTGGGCTCCCCCGGTTTTGTCAAAGCACTTATTGAACTGTTGNNTATACACAAG TTTACCATTGGGGCAATAGCGCTCTCAAGCATGCAAACTGACTGGAGCACTGTTATTGGA TAGCTTCTCATCATTGGATGTGCACACATAATACATTACAAATGTAATAG



consensusID : consensus_7823#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [GTATACACTTATATACACCGAAAAGAGCTTTTTTTTTATTCCCAAATCTGGCTCCCCGTTTTGTCAAACACTTATTGAATCTTTTTATACACAATTTACCATTGGGGCAATAGCGCTCTCAACATGCAAACTACTGGAGCACTGCTATTGGATAGCTTCTCATCATTGGATGGCACACATAATACATTACAATGTAATAGTCGTATCGAAAGGTTCGAAGCAAAGAAAACAAACACACACTCATAGGAACGATAATAATATTTACTGATAGTTCATTTCTCATCGTACTCGATCATTTCATCGTAATCCTCATGATACTACTGGGTACGCTTATTTACTGAACACGCGTTGTTATTAACACGGCAAACAATATTATATTGACTGATGTTCGCGTTCCGCGGCAGCACGTTAATTGAAAGTGATGTATAATTGTAGCATCTTTTAATATCACACCATAATTTAAACAGACGAAAACCGAAGAAATGTAATGCTGTATATGTTGGGTAGGAAAGTCCAACAGAGTCCGTTTATGACACAAAAATGCATAGATCAAAAAGGCAAAACACGTGAAACAACGGTTGGCAGGAGGATAAACCATCGGAATGGCATATCTTGCGAAAAGTTCTTAGTTGCAAGGGAACGGGCGCAAGGTAACATCAACCCG]

[+] EMBL BX609680             [GTATACACTTATATACACCGAAAAGAGCTTTTTTTTTATTCCCAAATCTGGCTCCCCGTTTTGTCAAACACTTATTGAATCTTTTTATACACAATTTACCATTGGGGCAATAGCGCTCTCAACATGCAAACTACTGGAGCACTGCTATTGGATAGCTTCTCATCATTGGATGGCACACATAATACATTACAATGTAATAGTCGTATCGAAAGGTTCGAAGCAAAGAAAACAAACACACACTCATAGGAACGATAATAATATTTACTGATAGTTCATTTCTCATCGTACTCGATCATTTCATCGTAATCCTCATGATACTACTGGGTACGCTTATTTACTGAACACGCGTTGTTATTAACACGGCAAACAATATTATATTGACTGATGTTCGCGTTCCGCGGCAGCACGTTAATTGAAAGTGATGTATAATTGTAGCATCTTTTAATATCACACCATAATTTAAACAGACGAAAACCGAAGAAATGTAATGCTGTATATGTTGGGTAGGAAAGTCCAACAGAGTCCGTTTATGACACAAAAATGCATAGATCAAAAAGGCAAAACACGTGAAACAACGGTTGGCAGGAGGATAAACCATCGGAATGGCATATCTTGCGAAAAGTTCTTAGTTGCAAGGGAACGGGCGCAAGGTAACATCAACCCG]


>consensus_7823#1 GTATACACTTATATACACCGAAAAGAGCTTTTTTTTTATTCCCAAATCTGGCTCCCCGTT TTGTCAAACACTTATTGAATCTTTTTATACACAATTTACCATTGGGGCAATAGCGCTCTC AACATGCAAACTACTGGAGCACTGCTATTGGATAGCTTCTCATCATTGGATGGCACACAT AATACATTACAATGTAATAGTCGTATCGAAAGGTTCGAAGCAAAGAAAACAAACACACAC TCATAGGAACGATAATAATATTTACTGATAGTTCATTTCTCATCGTACTCGATCATTTCA TCGTAATCCTCATGATACTACTGGGTACGCTTATTTACTGAACACGCGTTGTTATTAACA CGGCAAACAATATTATATTGACTGATGTTCGCGTTCCGCGGCAGCACGTTAATTGAAAGT GATGTATAATTGTAGCATCTTTTAATATCACACCATAATTTAAACAGACGAAAACCGAAG AAATGTAATGCTGTATATGTTGGGTAGGAAAGTCCAACAGAGTCCGTTTATGACACAAAA ATGCATAGATCAAAAAGGCAAAACACGTGAAACAACGGTTGGCAGGAGGATAAACCATCG GAATGGCATATCTTGCGAAAAGTTCTTAGTTGCAAGGGAACGGGCGCAAGGTAACATCAA CCCG



consensusID : consensus_7823#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence
                              [CAGAATCCCCCGAGGTATGTCATCAACAGATTGTCCAAACGCTTTCAATGCATTTGATGCATTTAGTTTGAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGTGCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATTTCGAAGACATATCAATTTTCTATCCACTTTAGACGATGCAAACAACCTACTGGACGCTTGCTAACTAAGTATATTGAATGACCGAGACTAAATTTACGAGTCAAAGCAAAATTAAACTCTCCCGAAAATTCAGCAAACGAACGACACAGTATACACTTATATACACCGCACACACAGAGCTTTATATTGATTCCCAAAATCTGGTCCCCCGGTCATACGGTCAAACACTTATTTGACACTGTACACTACTACACCAATTTACCCACTTGGGGCAATAGCGCTCTCNAACACTGCACAACTACCTGGAAGCACTGGTNACTCGGNATAGGCCTTCCTCCATCCACTTTGGCATGGGCACCACCATAATACATTCACCACTGTCAATAACTCGGTATCCNAAAAGGTTCGNAACGCCAAAGAANCACACTACACAAACCAC]

[+] EMBL AL929947             [CAGAATCCCCCGAGGTATGTCATCAACAGATTGTCCAAACGCTTTCAATGCATTTGATGCATTTAGTTTGAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGTGCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATTTCGAAGACATATCAATTTTCTATCCACTTTAGACGATGCAAACAACCTACTGGACGCTTGCTAACTAAGTATATTGAATGACCGAGACTAAATTTACGAGTCAAAGCAAAATTAAACTCTCCCGAAAATTCAGCAAACGAACGACACAGTATACACTTATATACACCGCACACACAGAGCTTTATATTGATTCCCAAAATCTGGTCCCCCGGTCATACGGTCAAACACTTATTTGACACTGTACACTACTACACCAATTTACCCACTTGGGGCAATAGCGCTCTCNAACACTGCACAACTACCTGGAAGCACTGGTNACTCGGNATAGGCCTTCCTCCATCCACTTTGGCATGGGCACCACCATAATACATTCACCACTGTCAATAACTCGGTATCCNAAAAGGTTCGNAACGCCAAAGAANCACACTACACAAACCAC]


>consensus_7823#2 CAGAATCCCCCGAGGTATGTCATCAACAGATTGTCCAAACGCTTTCAATGCATTTGATGC ATTTAGTTTGAAAGAGACCGAGAGAAATAAGAAGAAAAACCCATAATTTGTCCCATAAGT GCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAATT TCGAAGACATATCAATTTTCTATCCACTTTAGACGATGCAAACAACCTACTGGACGCTTG CTAACTAAGTATATTGAATGACCGAGACTAAATTTACGAGTCAAAGCAAAATTAAACTCT CCCGAAAATTCAGCAAACGAACGACACAGTATACACTTATATACACCGCACACACAGAGC TTTATATTGATTCCCAAAATCTGGTCCCCCGGTCATACGGTCAAACACTTATTTGACACT GTACACTACTACACCAATTTACCCACTTGGGGCAATAGCGCTCTCNAACACTGCACAACT ACCTGGAAGCACTGGTNACTCGGNATAGGCCTTCCTCCATCCACTTTGGCATGGGCACCA CCATAATACATTCACCACTGTCAATAACTCGGTATCCNAAAAGGTTCGNAACGCCAAAGA ANCACACTACACAAACCAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7823#0      CCGCCCACGCGTCCGCGGGCGGTTAAGTGAACTTATTCTACAATTTGTTTTCTTACCTAA 60
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      AGTTGACACTGGTAGAAATGCTTACGTTTAAAATCCAGTTTCATTCCGATACAATAGCAA 120
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      ACTATCTGATTTGAGATTTACAAAAAGAAGCGTCCTATTCTCATGTACTCCATCGTTATT 180
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      GCGGTATTACTTTATCCTAAACTTGTACGACACAGTTCTGTCTACAGAACAGCATATCCA 240
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      AGAGAATGTTGCTAGTATTTGTAACGAAGGGAGTAGCTTCATTCGAGCGGTAGGCAAACC 300
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      TATACTTAAACTAGCCCAATCTATCTGCTAGCAAACGCAATATTGCTATTAACAACCTAA 360
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      GCAGCTTAACCTACTATTAACCCGAACAAATGGAAAATAAAATGATCAGCGATATGGCTT 420
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      ATAAAGCTTTACCTGTAGTGTATCTATCCGCTGGCTGTGCTAGGCTCCCCGTACCGGAAA 480
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      AAAGCACGCCGAAATAGCTATGAAAGTATTGCTTTGAAATGGTTGCGTAGCAGAAGCGGA 540
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      AACACAGAACGGGAGTCGCACACGATTAGAGGTACCAAGCAGTCAGTTGCAAGTAATCAC 600
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      AAATAAAAAGTGTAGTTTAAAAGCTGCAACTGTAGTGAATAGTATAAATTAGCAGTACTG 660
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      CACAAATGTAGTTGCGAATGGCCCTGTATGGAGCAGCAATGCAAATGATCCAAATTCCCG 720
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      CGAGATAACAGGCCGATCTAATGTACTTAATTTAAAAAAAAACGATAAACGTCTAACAAT 780
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      ACCAGCCTATCAATCGTTAGCAATTGCAAGCGATACTGAAATTTGCTGTTGTTTGGTTTT 840
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      GCTGAAATGAAACTAACCGGCAAGATGGTCGTAACCAAATAAGAAATCTGGCAAACAAAC 900
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      CTGTTCAACTTCTGGCAGTCGTGTCTAAAACGTGGAAAATTGAAAAGAAAATATAGCAAA 960
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      CGTATTGTGATTACTAATATATACAACTATTAGCATAAAATTATGGTAATGAAATAAGAA 1020
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      GGAGCAAAGTAAAGGAAACATTGAAAACAAATTTAACAATTTGATGAAATGAATTAAATT 1080
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      ACGAAAGAAGTATGCAGCACACGAGAAATCCTTCAAACTACAAACGAAGAAAAAAAACAT 1140
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      CTCAAATGAAAGGACACAACATTGACAATGAACACGAACGTTCTTGCGTGCCTGTTCTAG 1200
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      TTAATTAAGCGTGCAAATGCTACGCAAAAGTATGCTACGCCTGTCCTGTAGAAACTTTTC 1260
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      TGTCTATTTAAATTGTTGTCGTTTTAGGTTCAGCTGACGATTAGAGAGAAAACAGCAGCA 1320
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      GTAATAGCGAATGTAAATTCAAATGAAATCATCATATCCTTGAGTTTGATGTATTTGCGC 1380
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      TTGGATTATATTTTGTACAGCAATTAATTTTACACAGACGTACATTTTACAGCTTTTGCT 1440
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      TGTAGATATGTGTAAATATATGATAGTAATGAAGGTGTTTAACCTTCCTCGTTTTGTTTT 1500
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      ACGCGATCGCCCTTTGAAGAAGTTGTTCAAGTTGGTCGATGGTCTATAAAATTGTTTTTT 1560
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      TTTGCCGTTTGTCAAATAAGAAAATGAGCCGCATGATTGAAACTAAATCAATGACGAAGT 1620
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ------------------------------------------------------------
                                                                                  

consensus_7823#0      AATGGGGATAAGCTGTGTCTCAAAACACAATTTCACTACAAAATACAGAAACATGTGAAT 1680
consensus_7823#2      ------------------------------------------------------------
consensus_7823#1      ----------------------------GTATACACTTATATACACCGAAAAGAGCTT-T 31
                                                                                  

consensus_7823#0      TCTGCTTTGCTCTGATAATGCAAGTAGCGCTGATAGATAAATACAATTACTTCTACTGTC 1740
consensus_7823#2      -----------------------------------------------------CAGAATC 7
consensus_7823#1      TTTTTTATTCCCAAATCTGGCTCCCCGTTTTGTCAAACACTTATTGAATCTTTTTATACA 91
                                                                                  

consensus_7823#0      TATCAAATAATGTCATCAACAG-------ATTGTCCAAAG--TTTCAATGCATTTGATGC 1791
consensus_7823#2      CCCCGAGGTATGTCATCAACAG-------ATTGTCCAAACGCTTTCAATGCATTTGATGC 60
consensus_7823#1      CAATTTACCATTGGGGCAATAGCGCTCTCAACATGCAAACTACTGGAGCACTGCTATTGG 151
                               **     *** **       *   * ****    *  *   *   *  ** 

consensus_7823#0      ATTTAGTTTGAA-AGAGACCGAGAGAAATAAGA-AGAAAAACCCATAATTTGTCCCATAA 1849
consensus_7823#2      ATTTAGTTTGAA-AGAGACCGAGAGAAATAAGA-AGAAAAACCCATAATTTGTCCCATAA 118
consensus_7823#1      ATAGCTTCTCATCATTGGATGGCACACATAATACATTACAATGTAATAGTCGTATCGAAA 211
                      **    * * *  *  *   *  * * **** * *  * **   *  * * **  *  **

consensus_7823#0      GTGCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAA 1909
consensus_7823#2      GTGCACCTGCCAAAGCAGATATCCAGGAAAGATTTGGACTGCTGCGTATTATTACCGAAA 178
consensus_7823#1      G-GTTCGAAGCAAAGAAAACAAACACACACTCATAGGAACGATAATAATATTTACTGATA 270
                      * *  *    ***** * * *  **   *    * ***  * *    **  **** ** *

consensus_7823#0      TTTCGAAGACATATCAATTTTCTATCCACTTTAGATGATGCAAACA-C-CTACTGG--AC 1965
consensus_7823#2      TTTCGAAGACATATCAATTTTCTATCCACTTTAGACGATGCAAACAAC-CTACTGG--AC 235
consensus_7823#1      GTTC-ATTTCTCATCG-TACTCGATCATTTCATCGTAATCCTCATGATACTACTGGGTAC 328
                       *** *   *  ***  *  ** ***   *       ** *  *     *******  **

consensus_7823#0      GCTTGCTACT--AGTATAT-GAATGACCGA---GACTAA-TTTACGAGTCAAAGCAAAAT 2018
consensus_7823#2      GCTTGCTAACTAAGTATATTGAATGACCGA---GACTAAATTTACGAGTCAAAGCAAAAT 292
consensus_7823#1      GCTTATTTACTGAACACGCGTTGTTATTAACACGGCAAACAATATTATATTGACTGATGT 388
                      ****  *     *  *       * *   *   * * **   **  *     *   *  *

consensus_7823#0      TAAACTCTCCCGAAA-TTCAGCAAACGAACG----ACACAGGTATA-CACTTATATACAC 2072
consensus_7823#2      TAAACTCTCCCGAAAATTCAGCAAACGAACG----ACACAG-TATA-CACTTATATACAC 346
consensus_7823#1      TCGCGTTCCGCGGCAGCACGTTAATTGAAAGTGATGTATAATTGTAGCATCTTTTAATAT 448
                      *    *  * **  *   *   **  *** *      * *  * ** **  * *  * * 

consensus_7823#0      CGAAAAGAGCTTTTCTTCGTTGGATTCCCAANATCTGGGCTCCCCCGGTTTT---GTCAA 2129
consensus_7823#2      CGCACACACAGAGCTTTATATTGATTCCCAAAATCTGGTCCCCCGGTCATAC---GGTCA 403
consensus_7823#1      CACACCATAATTTAAACAGACGAAAACCGAAGAAATGTAATGCTGTATATGTTGGGTAGG 508
                      *  *                   *  ** ** *  **     *      *     *    

consensus_7823#0      AGCACTTATTGAAC--TGTTGNNTA-TACACAAGTTTACCA--TTGGGGCAATAGCGCTC 2184
consensus_7823#2      AACACTTATTTGACACTGTACACTACTACACCAATTTACCCACTTGGGGCAATAGCGCTC 463
consensus_7823#1      AAAGTCCAACAGAGTCCGTTTATGA-CACAAAAATGCATAGA-TCAAAAAGGCAAAACAC 566
                      *      *    *    **     *  ***  * *  *     *         *   * *

consensus_7823#0      -TCAAGCA-TGCA-AACTGACTGGA-GCACTG-TTATTGGATA---GCTTCTCATCATT- 2235
consensus_7823#2      -TCNAACACTGCACAACTACCTGGAAGCACTGGTNACTCGGNATAGGCCTTCCTCCATCC 522
consensus_7823#1      GTGAAACAACGGTTGGCAGGA-GGATAAACCATCGGAATGGCATATCTTGCGAAAAGTTC 625
                       *  * **  *     *     ***   **         *  *              *  

consensus_7823#0      ------GGATGTGCACA--CATAATACATT-ACAAATGT-AATAG--------------- 2270
consensus_7823#2      ACTTTGGCATGGGCACCACCATAATACATTCACCACTGTCAATAACTCGGTATCCNAAAA 582
consensus_7823#1      TTAGTTGCAAGGGAACGGGCGCAAGGTAACATCAACCCG--------------------- 664
                            * * * * **   *  **   *    * *                         

consensus_7823#0      -------------------------------------
consensus_7823#2      GGTTCGNAACGCCAAAGAANCACACTACACAAACCAC 619
consensus_7823#1      -------------------------------------
                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)