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Anopheles gambiae
cluster # 7853 cluster # 7853       Sequences # 8       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7853#0 length = 923 sequences # 2  
consensus_7853#1 length = 657 sequences # 1  
consensus_7853#2 length = 582 sequences # 1  
consensus_7853#3 length = 543 sequences # 1  
consensus_7853#4 length = 491 sequences # 1  
consensus_7853#5 length = 447 sequences # 1  
consensus_7853#6 length = 205 sequences # 1  

consensusID : consensus_7853#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 923
fasta sequence
                              [TTGTTCACATGTATCTTTATTAGACGCTTTGGCAAACTATTCGATGCTTCAACTTAATGCGCTGTTTTTTTCCGTTCGGGTTTATACATAAATACCACAGCAAACTTCCCTAGATCACAATAAAACCTACTATCACATACTTGAACGTATGTGGGAAGCTCAGTCAAGTTGACTGCACTTCAACCCTCTAATCCGCCACTTCAGCGGATGCCATTCCTTCCATCACCGGTTCGTAGAGCAAGTGTCGGACGTCGCTCGCGATCAAGAAGTCCAGATGGTTAAACAGCACATCGTTCACCGCAACGCTTCGCTTCAGGTTGGGCAGCTTCCTGGCCAGTCGGTTCACGTCCTCCGGTGTGGCGAGAAAATCGTTCAACCCATAGTAGATCAGTACATTTTTCAGCTTTCCATAGTCATACATTTCGAACCGATTCGACAGCACCTCCTGGGTGTAGTGCACCAATTGCCGCGTGGCCGAGCCGGCTGGCGTATGTACGAACAGGATCGGCAGCATCACCGGATCCAGCTGCGAAGGGTTGTACCCGGCCAGCAGGAAGAGCAGATGCGCACACATGTTAATGTGCCCCGTCGAGTTTGGCGGACAGATGAGCTGGGCGTTTTCGTGCAGTATCGGTTTGTTGGGCATGAACTCTCCGACGCCGAATACGGCCCGCAGAATGTCGGGCGTCTTCAGGAACTTGGTCATGAATCGCAGCAGCGGACTCTTCATGTGTCCCATGGAGGCCACCGGGGCGGGGGCATTCATCTGGATGATCTTATCGTTGTATTCTGGCCGGGTGGAAGCCCTCACGGAGAATCCGGTCGTGCCCTGCGAGTGGCCCACGTACTGCAATCGTCGGTGTCCCGTTTGCTCCAGTTTGTTGTCGCTCGTGGCCGGAATGTCGTAGCGTCCGTTTTCGTGC]

[+] EMBL CNS09MWC             [TTGTTCACATGTATCTTTATTAGACGCTTTGGCAAACTATTCGATGCTTCAACTTAATGCGCTGTTTTTTTCCGTTCGGGTTTATACATAAATACCACAGCAAACTTCCCTAGATCACAATAAAACCTACTATCACATACTTGAACGTATGTGGGAAGCTCAGTCAAGTTGACTGCACTTCAACCCTCTAATCCGCCACTTCAGCGGATGCCATTCCTTCCATCACCGGTTCGTAGAGCAAGTGTCGGACGTCGCTCGCGATCAAGAAGTCCAGATGGTTAAACAGCACATCGTTCACCGCAACGCTTCGCTTCAGGTTGGGCAGCTTCCTGGCCAGTCGGTTCACGTCCTCCGGTGTGGCGAGAAAATCGTTCAACCCATAGTAGATCAGTACATTTTTCAGCTTTCCATAGTCATACATTTCGAACCGATTCGACAGCACCTCCTGGGTGTAGTGCACCAATTGCCGCGTGGCCGAGCCGGCTGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09GUO             [                                                                                                                                                                                                                                                                                                                                                                                                                        CATAGTCATACATTTCGAACCGATTCGACAGCACCTCCTGGGCGTAGTGCACCAACTGCCGCGTGGCCGAGCCGGCTGGCGTATGTACGAACAGGATCGGCAGCATCACCGGATCCAGCTGCGAAGGGTTGTACCCGGCCAGCAGGAAGAGCAGATGCGCACACATGTTAATGTGCCCCGTCGAGTTTGGCGGACAGATGAGCTGGGCGTTTTCGTGCAGTATCGGTTTGTTGGGCATGAACTCTCCGACGCCGAATACGGCCCGCAGAATGTCGGGCGTCTTCAGGAACTTGGTCATGAATCGCAGCAGCGGACTCTTCATGTGTCCCATGGAGGCCACCGGGGCGGGGGCATTCATCTGGATGATCTTATCGTTGTATTCTGGCCGGGTGGAAGCCCTCACGGAGAATCCGGTCGTGCCCTGCGAGTGGCCCACGTACTGCAATCGTCGGTGTCCCGTTTGCTCCAGTTTGTTGTCGCTCGTGGCCGGAATGTCGTAGCGTCCGTTTTCGTGC]


>consensus_7853#0 TTGTTCACATGTATCTTTATTAGACGCTTTGGCAAACTATTCGATGCTTCAACTTAATGC GCTGTTTTTTTCCGTTCGGGTTTATACATAAATACCACAGCAAACTTCCCTAGATCACAA TAAAACCTACTATCACATACTTGAACGTATGTGGGAAGCTCAGTCAAGTTGACTGCACTT CAACCCTCTAATCCGCCACTTCAGCGGATGCCATTCCTTCCATCACCGGTTCGTAGAGCA AGTGTCGGACGTCGCTCGCGATCAAGAAGTCCAGATGGTTAAACAGCACATCGTTCACCG CAACGCTTCGCTTCAGGTTGGGCAGCTTCCTGGCCAGTCGGTTCACGTCCTCCGGTGTGG CGAGAAAATCGTTCAACCCATAGTAGATCAGTACATTTTTCAGCTTTCCATAGTCATACA TTTCGAACCGATTCGACAGCACCTCCTGGGTGTAGTGCACCAATTGCCGCGTGGCCGAGC CGGCTGGCGTATGTACGAACAGGATCGGCAGCATCACCGGATCCAGCTGCGAAGGGTTGT ACCCGGCCAGCAGGAAGAGCAGATGCGCACACATGTTAATGTGCCCCGTCGAGTTTGGCG GACAGATGAGCTGGGCGTTTTCGTGCAGTATCGGTTTGTTGGGCATGAACTCTCCGACGC CGAATACGGCCCGCAGAATGTCGGGCGTCTTCAGGAACTTGGTCATGAATCGCAGCAGCG GACTCTTCATGTGTCCCATGGAGGCCACCGGGGCGGGGGCATTCATCTGGATGATCTTAT CGTTGTATTCTGGCCGGGTGGAAGCCCTCACGGAGAATCCGGTCGTGCCCTGCGAGTGGC CCACGTACTGCAATCGTCGGTGTCCCGTTTGCTCCAGTTTGTTGTCGCTCGTGGCCGGAA TGTCGTAGCGTCCGTTTTCGTGC



consensusID : consensus_7853#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 657
fasta sequence
                              [CCGATCAGGATGATACTCCATTCGATGAAGTTAAGCGATCTAATGCTTTGAATGATAATGCTAACCGAAACGTACCAACGATCAACGAAGACACAGTGCAAACGTCGGTCCCTGAACCGGAACGAAATCAGGTGCCTGTAACGACAACCGTCCCATCAACCGAAGGAGCAGTTACGGGCGACACGCTTAAAGATCAAATGGACGAGTTAGTTCGAAACTATAATAAACTAGCGGAGTCGTTAGACGTACCGAAGGTTGAAGAGGTTGTCGATGTTCCGGACACGATCCCAGCACAGGTGAATGAGGACGCGAACGATGACGGTGATGAAGAAGAAATTCTGGAAGTTACCCGTGGATCTCAGCCAGCAAACGACGATGACGACGATGATGTGGATGATGATGATGCTGCATTCAGCGAGCTCGTGGACAACGACGGAGGAGAAGAGGAATATCTGGAGAAGCTCCGTGCAGAGCAGCAGCGACGTGCAGCAGCGGAAGCAGAACGCAGAGCCGCTGCCGAGCCGGAAGAGGAAACTTCACAAATCCCCTCGAGGGCTGAAGAAGCTGATCGGTCCTACCAGGAAGAACTGAGACGGGCTGAGCAGCAACTCGATGAGAACAAGCCCCAGGAAGCGCTGGCCGCTTTCGATCGTATAT]

[+] EMBL BM649416             [CCGATCAGGATGATACTCCATTCGATGAAGTTAAGCGATCTAATGCTTTGAATGATAATGCTAACCGAAACGTACCAACGATCAACGAAGACACAGTGCAAACGTCGGTCCCTGAACCGGAACGAAATCAGGTGCCTGTAACGACAACCGTCCCATCAACCGAAGGAGCAGTTACGGGCGACACGCTTAAAGATCAAATGGACGAGTTAGTTCGAAACTATAATAAACTAGCGGAGTCGTTAGACGTACCGAAGGTTGAAGAGGTTGTCGATGTTCCGGACACGATCCCAGCACAGGTGAATGAGGACGCGAACGATGACGGTGATGAAGAAGAAATTCTGGAAGTTACCCGTGGATCTCAGCCAGCAAACGACGATGACGACGATGATGTGGATGATGATGATGCTGCATTCAGCGAGCTCGTGGACAACGACGGAGGAGAAGAGGAATATCTGGAGAAGCTCCGTGCAGAGCAGCAGCGACGTGCAGCAGCGGAAGCAGAACGCAGAGCCGCTGCCGAGCCGGAAGAGGAAACTTCACAAATCCCCTCGAGGGCTGAAGAAGCTGATCGGTCCTACCAGGAAGAACTGAGACGGGCTGAGCAGCAACTCGATGAGAACAAGCCCCAGGAAGCGCTGGCCGCTTTCGATCGTATAT]


>consensus_7853#1 CCGATCAGGATGATACTCCATTCGATGAAGTTAAGCGATCTAATGCTTTGAATGATAATG CTAACCGAAACGTACCAACGATCAACGAAGACACAGTGCAAACGTCGGTCCCTGAACCGG AACGAAATCAGGTGCCTGTAACGACAACCGTCCCATCAACCGAAGGAGCAGTTACGGGCG ACACGCTTAAAGATCAAATGGACGAGTTAGTTCGAAACTATAATAAACTAGCGGAGTCGT TAGACGTACCGAAGGTTGAAGAGGTTGTCGATGTTCCGGACACGATCCCAGCACAGGTGA ATGAGGACGCGAACGATGACGGTGATGAAGAAGAAATTCTGGAAGTTACCCGTGGATCTC AGCCAGCAAACGACGATGACGACGATGATGTGGATGATGATGATGCTGCATTCAGCGAGC TCGTGGACAACGACGGAGGAGAAGAGGAATATCTGGAGAAGCTCCGTGCAGAGCAGCAGC GACGTGCAGCAGCGGAAGCAGAACGCAGAGCCGCTGCCGAGCCGGAAGAGGAAACTTCAC AAATCCCCTCGAGGGCTGAAGAAGCTGATCGGTCCTACCAGGAAGAACTGAGACGGGCTG AGCAGCAACTCGATGAGAACAAGCCCCAGGAAGCGCTGGCCGCTTTCGATCGTATAT



consensusID : consensus_7853#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 582
fasta sequence
                              [CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGGCGTACAGTTTGCGATTGTAAATCTATCTCCATACCAGAGCCGCGTTTTACGAGATTTCAGAGGTGCGCATCAGCTCGCTGGTGGTGTCTGAAAAGTGTTCAAAGTGCAACAGGGTACAAAGTGATTTCCGAAATTATCTTCCTTCGGACAGAAGCTGCGCTGCTCTAACCATGGCTCCAGTCGAAAAGCAGACCGACCAGGAATTGACGATTGAAGATCCGACCGTCATCGAAAAGTACAGAATAGCCGGTGATGTTGTGAACAGAACCCTCCAAGCAATTGTCAAAGAATGTGTTGCTGGTGCTTCAGTCAAAGAAATTTGCCAGAAGGGTGACAATATGCTGATGCATGATACGGGAAAGAAATATAAGCATGATGAAGACATGAAGAAAGGCATTGCCTTCCCAACATGCCTCTCGGTGAACAACTGCATCTGTCACTTTTCACCAGCGCGTAACGATCCGGACTACGTGCTGAAAGAGAACGATGTGGTCAAGATCGACATGGGCGCACACATCGACGGTTTCATCGCGGTTGCG]

[+] EMBL BM585311             [CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGGCGTACAGTTTGCGATTGTAAATCTATCTCCATACCAGAGCCGCGTTTTACGAGATTTCAGAGGTGCGCATCAGCTCGCTGGTGGTGTCTGAAAAGTGTTCAAAGTGCAACAGGGTACAAAGTGATTTCCGAAATTATCTTCCTTCGGACAGAAGCTGCGCTGCTCTAACCATGGCTCCAGTCGAAAAGCAGACCGACCAGGAATTGACGATTGAAGATCCGACCGTCATCGAAAAGTACAGAATAGCCGGTGATGTTGTGAACAGAACCCTCCAAGCAATTGTCAAAGAATGTGTTGCTGGTGCTTCAGTCAAAGAAATTTGCCAGAAGGGTGACAATATGCTGATGCATGATACGGGAAAGAAATATAAGCATGATGAAGACATGAAGAAAGGCATTGCCTTCCCAACATGCCTCTCGGTGAACAACTGCATCTGTCACTTTTCACCAGCGCGTAACGATCCGGACTACGTGCTGAAAGAGAACGATGTGGTCAAGATCGACATGGGCGCACACATCGACGGTTTCATCGCGGTTGCG]


>consensus_7853#2 CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGGCGTACAGTTTGCGATTG TAAATCTATCTCCATACCAGAGCCGCGTTTTACGAGATTTCAGAGGTGCGCATCAGCTCG CTGGTGGTGTCTGAAAAGTGTTCAAAGTGCAACAGGGTACAAAGTGATTTCCGAAATTAT CTTCCTTCGGACAGAAGCTGCGCTGCTCTAACCATGGCTCCAGTCGAAAAGCAGACCGAC CAGGAATTGACGATTGAAGATCCGACCGTCATCGAAAAGTACAGAATAGCCGGTGATGTT GTGAACAGAACCCTCCAAGCAATTGTCAAAGAATGTGTTGCTGGTGCTTCAGTCAAAGAA ATTTGCCAGAAGGGTGACAATATGCTGATGCATGATACGGGAAAGAAATATAAGCATGAT GAAGACATGAAGAAAGGCATTGCCTTCCCAACATGCCTCTCGGTGAACAACTGCATCTGT CACTTTTCACCAGCGCGTAACGATCCGGACTACGTGCTGAAAGAGAACGATGTGGTCAAG ATCGACATGGGCGCACACATCGACGGTTTCATCGCGGTTGCG



consensusID : consensus_7853#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 543
fasta sequence
                              [CCGCCCACGCGTCCGCAACTTTTAGAAATGAAAAACCTGCAGCTACGAGCCATCATTGCGCTGGTAATACTGTGCATCCAACAGGCACAATCTCTCCAGTGCTACGTGTGTCTAAGTGCGGTGAGCTTTGACGACTGCTCCACTAAAGCCCAGAAAATTGACTGTGACTCACCGCCGCCCGATCTGCCGTTCCCGTTCACCGCGTCAACGTCTAGAAATGGCAACTTCGCGTGCGGAAAGGGCAGCGGATCCGGTTCGGGAGGGCAGGTCTTTATGAAATCGTGCATTCCCAAAATGACCGAGACAGAGTTCTGTGCCTTGCTAACGGCGGAAGTGGAGGCGGACGGCAAAGTGGACGTATGTAAAGTGTGCAACGACAATCTATGTAACGCGAGCAGTACGCGAGTGTTGACCGGTGCTTTGCTGCTGTTGACCGTTGGTCTAATTTTTCGCACGTAGCTAGGGGCGATTGTGTAACGGCCGCATATAAGCCGTACGACAGTCAGTGAGACTGAAAATAGACTTCTAATTCATTCATTTAGT]

[+] EMBL BM619745             [CCGCCCACGCGTCCGCAACTTTTAGAAATGAAAAACCTGCAGCTACGAGCCATCATTGCGCTGGTAATACTGTGCATCCAACAGGCACAATCTCTCCAGTGCTACGTGTGTCTAAGTGCGGTGAGCTTTGACGACTGCTCCACTAAAGCCCAGAAAATTGACTGTGACTCACCGCCGCCCGATCTGCCGTTCCCGTTCACCGCGTCAACGTCTAGAAATGGCAACTTCGCGTGCGGAAAGGGCAGCGGATCCGGTTCGGGAGGGCAGGTCTTTATGAAATCGTGCATTCCCAAAATGACCGAGACAGAGTTCTGTGCCTTGCTAACGGCGGAAGTGGAGGCGGACGGCAAAGTGGACGTATGTAAAGTGTGCAACGACAATCTATGTAACGCGAGCAGTACGCGAGTGTTGACCGGTGCTTTGCTGCTGTTGACCGTTGGTCTAATTTTTCGCACGTAGCTAGGGGCGATTGTGTAACGGCCGCATATAAGCCGTACGACAGTCAGTGAGACTGAAAATAGACTTCTAATTCATTCATTTAGT]


>consensus_7853#3 CCGCCCACGCGTCCGCAACTTTTAGAAATGAAAAACCTGCAGCTACGAGCCATCATTGCG CTGGTAATACTGTGCATCCAACAGGCACAATCTCTCCAGTGCTACGTGTGTCTAAGTGCG GTGAGCTTTGACGACTGCTCCACTAAAGCCCAGAAAATTGACTGTGACTCACCGCCGCCC GATCTGCCGTTCCCGTTCACCGCGTCAACGTCTAGAAATGGCAACTTCGCGTGCGGAAAG GGCAGCGGATCCGGTTCGGGAGGGCAGGTCTTTATGAAATCGTGCATTCCCAAAATGACC GAGACAGAGTTCTGTGCCTTGCTAACGGCGGAAGTGGAGGCGGACGGCAAAGTGGACGTA TGTAAAGTGTGCAACGACAATCTATGTAACGCGAGCAGTACGCGAGTGTTGACCGGTGCT TTGCTGCTGTTGACCGTTGGTCTAATTTTTCGCACGTAGCTAGGGGCGATTGTGTAACGG CCGCATATAAGCCGTACGACAGTCAGTGAGACTGAAAATAGACTTCTAATTCATTCATTT AGT



consensusID : consensus_7853#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 491
fasta sequence
                              [CCGCCCACGCGTCCGAGCGGACGTGCGACCATCCGCGTATGCTATGCGGCAACATCAACGTGTGTGATACGAGAGCCCAAAGAAGAGAAAACTTGTGAAGTGTACAAACGAAGAAAGAATTCCCGATAATCCTTAGTTTTCAATCAGTTTTACTTGCGTTCTGCAATCAAGAGGATTTCCTGGAGTGCAGTGATCGTCAGCTAACGGTGCAAATATCGGCCGGAAAAGGTGTAGCATCCGAACAGAATGGACCAACCCAATCGTGGACGCGGTCGCGGAACACGTGGCGGACCCGGCGGCAGCGGTGCGCAGCCGAACTGGAAGCAAGGGCGGTGGTCCCTCCCGCCCACCGTACGTTTCCGACCGCCCCCAGGAAGCAGCAGGCACTAGCGGAAATGGTGGCCACGGTAACGGCAATGGCAACGGCAACGGAAATGGGAAATGGAGATCCATCCACCAGATCGGTCGTACCGGTGGCACAGCGCGGCGGC]

[+] EMBL BM589677             [CCGCCCACGCGTCCGAGCGGACGTGCGACCATCCGCGTATGCTATGCGGCAACATCAACGTGTGTGATACGAGAGCCCAAAGAAGAGAAAACTTGTGAAGTGTACAAACGAAGAAAGAATTCCCGATAATCCTTAGTTTTCAATCAGTTTTACTTGCGTTCTGCAATCAAGAGGATTTCCTGGAGTGCAGTGATCGTCAGCTAACGGTGCAAATATCGGCCGGAAAAGGTGTAGCATCCGAACAGAATGGACCAACCCAATCGTGGACGCGGTCGCGGAACACGTGGCGGACCCGGCGGCAGCGGTGCGCAGCCGAACTGGAAGCAAGGGCGGTGGTCCCTCCCGCCCACCGTACGTTTCCGACCGCCCCCAGGAAGCAGCAGGCACTAGCGGAAATGGTGGCCACGGTAACGGCAATGGCAACGGCAACGGAAATGGGAAATGGAGATCCATCCACCAGATCGGTCGTACCGGTGGCACAGCGCGGCGGC]


>consensus_7853#4 CCGCCCACGCGTCCGAGCGGACGTGCGACCATCCGCGTATGCTATGCGGCAACATCAACG TGTGTGATACGAGAGCCCAAAGAAGAGAAAACTTGTGAAGTGTACAAACGAAGAAAGAAT TCCCGATAATCCTTAGTTTTCAATCAGTTTTACTTGCGTTCTGCAATCAAGAGGATTTCC TGGAGTGCAGTGATCGTCAGCTAACGGTGCAAATATCGGCCGGAAAAGGTGTAGCATCCG AACAGAATGGACCAACCCAATCGTGGACGCGGTCGCGGAACACGTGGCGGACCCGGCGGC AGCGGTGCGCAGCCGAACTGGAAGCAAGGGCGGTGGTCCCTCCCGCCCACCGTACGTTTC CGACCGCCCCCAGGAAGCAGCAGGCACTAGCGGAAATGGTGGCCACGGTAACGGCAATGG CAACGGCAACGGAAATGGGAAATGGAGATCCATCCACCAGATCGGTCGTACCGGTGGCAC AGCGCGGCGGC



consensusID : consensus_7853#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence
                              [AGATCCCCACGATTNAAATCGGAATCACAAAGCATNCTGGGCGTAGCAAATTGGCATAGCGCACGGAGTTTGCAGGCGGAAATTACGCACCACTGTCTTGCGTCAAACTGTCAACGTTTCGTCGCCTGCTTCGTTTACATTGTTTACAGCAAGCAAAGCAATAGAGGTTGTACTGCAATGGCACTGAGAGCGTTGTTTGCCAGCAGAATTGCACAACTAAAACCAATCACCAACCATGGGCGGGGAATTTGGGCGGTGCGTTCCTGCCGAGCGGCGTCAACTGATAAAGGTCCCACCTTCGACTGGGAAGATCCGCTGAATCTGGAATCACAGCTGAAGGAGGATGAAATTGCGATTCGCGACTCGTTCCGCGCCTACTGCGAGGATAAGCTGCTGTCGCGCGTTATCGAGGCGAACCGCAATGAGGTGTTCCACAAGGAGATTATG]

[+] EMBL AL930520             [AGATCCCCACGATTNAAATCGGAATCACAAAGCATNCTGGGCGTAGCAAATTGGCATAGCGCACGGAGTTTGCAGGCGGAAATTACGCACCACTGTCTTGCGTCAAACTGTCAACGTTTCGTCGCCTGCTTCGTTTACATTGTTTACAGCAAGCAAAGCAATAGAGGTTGTACTGCAATGGCACTGAGAGCGTTGTTTGCCAGCAGAATTGCACAACTAAAACCAATCACCAACCATGGGCGGGGAATTTGGGCGGTGCGTTCCTGCCGAGCGGCGTCAACTGATAAAGGTCCCACCTTCGACTGGGAAGATCCGCTGAATCTGGAATCACAGCTGAAGGAGGATGAAATTGCGATTCGCGACTCGTTCCGCGCCTACTGCGAGGATAAGCTGCTGTCGCGCGTTATCGAGGCGAACCGCAATGAGGTGTTCCACAAGGAGATTATG]


>consensus_7853#5 AGATCCCCACGATTNAAATCGGAATCACAAAGCATNCTGGGCGTAGCAAATTGGCATAGC GCACGGAGTTTGCAGGCGGAAATTACGCACCACTGTCTTGCGTCAAACTGTCAACGTTTC GTCGCCTGCTTCGTTTACATTGTTTACAGCAAGCAAAGCAATAGAGGTTGTACTGCAATG GCACTGAGAGCGTTGTTTGCCAGCAGAATTGCACAACTAAAACCAATCACCAACCATGGG CGGGGAATTTGGGCGGTGCGTTCCTGCCGAGCGGCGTCAACTGATAAAGGTCCCACCTTC GACTGGGAAGATCCGCTGAATCTGGAATCACAGCTGAAGGAGGATGAAATTGCGATTCGC GACTCGTTCCGCGCCTACTGCGAGGATAAGCTGCTGTCGCGCGTTATCGAGGCGAACCGC AATGAGGTGTTCCACAAGGAGATTATG



consensusID : consensus_7853#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 205
fasta sequence
                              [GGCGGTGTCCCAGCACGCGGCCAAGGTTGCTGTTGTGTAGTAGTGTGGGAAGCAGCTGCTTATGCTAGAGAGAAGGGACGGCGAAGCCCCCTGCTCTCGGTTTGAACCCCCTCGACGCGAGGCGGTAAATTCTCAGCAAGGCATAAACGTATCGCTTCGTTACAAGCAATACAACCAGTACGCCATTTTACATATTCAGCCTCTC]

[+] EMBL BX616312             [GGCGGTGTCCCAGCACGCGGCCAAGGTTGCTGTTGTGTAGTAGTGTGGGAAGCAGCTGCTTATGCTAGAGAGAAGGGACGGCGAAGCCCCCTGCTCTCGGTTTGAACCCCCTCGACGCGAGGCGGTAAATTCTCAGCAAGGCATAAACGTATCGCTTCGTTACAAGCAATACAACCAGTACGCCATTTTACATATTCAGCCTCTC]


>consensus_7853#6 GGCGGTGTCCCAGCACGCGGCCAAGGTTGCTGTTGTGTAGTAGTGTGGGAAGCAGCTGCT TATGCTAGAGAGAAGGGACGGCGAAGCCCCCTGCTCTCGGTTTGAACCCCCTCGACGCGA GGCGGTAAATTCTCAGCAAGGCATAAACGTATCGCTTCGTTACAAGCAATACAACCAGTA CGCCATTTTACATATTCAGCCTCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7853#0      TTGTTCACATGTATCTTTATTAGACGCTTTGGCAAACTATTCGATGCTTCAACTTAATGC 60
consensus_7853#4      ------------------------------------------------------------
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      ------------------------------------------------------------
consensus_7853#5      ------------------------------------------------------------
consensus_7853#3      ------------------------------------------------------------
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GCTGTTTTTTTCCGTTCGGGTTTATACATAAATACCACAGCAAACTTCCCTAGATCACAA 120
consensus_7853#4      ------------------------------------------------------------
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      ------------------------------------------------------------
consensus_7853#5      ------------------------------------------------------------
consensus_7853#3      ------------------------------------------------------------
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      TAAAACCTACTATCACATACTTGAACGTATGTGGGAAGCTCAGTCAAGTTGACTGCACTT 180
consensus_7853#4      ------------------------------------------------------------
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      ------------------------------------------------------------
consensus_7853#5      ------------------------------------------------------------
consensus_7853#3      ------------------------------------------------------------
consensus_7853#1      --------------------CCGATCAGGATGATACTCCATTCGATGAAGTTAAGCGATC 40
                                                                                  

consensus_7853#0      CAACCCTCTAATCCGCCACTTCAGCGGATGCCATTCCTTCCATCACCGGTTCGTAGAGCA 240
consensus_7853#4      ------------------------------------------------------------
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      ------------------CGACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTG 42
consensus_7853#5      ------------------------------------------------------------
consensus_7853#3      ----------------------------------------------------------CC 2
consensus_7853#1      TAATGCTTTGAATGATAATGCTAACCGAAACGTACCAACGATCAACGAAGACACAGTGCA 100
                                                                                  

consensus_7853#0      AGTGTCGGACGTCGCTCGCGATCAAGAAGTCCAGATGGTTAAACAGCACATCGTTCACCG 300
consensus_7853#4      ----------------------------------CCGCCCACGCGTCCGAGCGGACGT-G 25
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      GCGTACAGTTTGCGATTGTAAATCTATCTCCATACCAGAGCCGCGTTTTACGAGATTT-- 100
consensus_7853#5      -----------------------------------------AGATCCCCACGATTNAAAT 19
consensus_7853#3      GCCCACGCGTCCGCAACTTTTAGAAATGAAAAACCTGCAGCTACGAGCCATCATTGCG-C 61
consensus_7853#1      AACGTCGGTCCCTGAACCGGAACGAAATCAGGTGCCTGTAACGACAACCGTCCCATCAAC 160
                                                                                  

consensus_7853#0      CAACGCTTCGCTTCAGGTTGGGCAGCTTCCTGGCCAGTCGGTTCACGTCCTCCGGTGTGG 360
consensus_7853#4      CGACCATCCGCGT-ATGCTATGCGGCAACATCAACGTGTGTGATACGAGAGCCCAAAGAA 84
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      CAGAGGTGCGCATCAGCTCGCTGGTGGTGTCTGAAAAGTGTTCAAAGTGCAACAGGGTAC 160
consensus_7853#5      CGGAATCACAAAGCATNCTG---GGCGTAGCAAATTGGCATAGCGCACGGAGTTTGCAGG 76
consensus_7853#3      TGGTAATACTGTGCATCCAACAGGCACAATCTCTCCAGTGCTACGTGTGTCTAAGTGCGG 121
consensus_7853#1      CGAAGGAGCAGTTACGGGCGACACGCTTAAAGATCAAATGGACGAGTTAGTTCGAAACTA 220
                                                                                  

consensus_7853#0      CGAGAAAATCGTTCAACC--------CATAGTAGATCAGTACATTTTTCAGCTTTCCATA 412
consensus_7853#4      GAGAAAACTTGTGAAGTG--------TACAAACGAAGAAAG--------AATTCCCGATA 128
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      AAAGTGATTTCCGAAATTAT----CTTCCTTCGGACAGAAGCTGCGCTGCTCTAACCATG 216
consensus_7853#5      CGGAAATTACGCACCACTGT----CTTGCGTCAAACTGTCA---------ACGTTTCGTC 123
consensus_7853#3      TGAGCTTTGACGACTGCTCC----ACTAAAGCCCAGAAAATTGACTGT-GACTCACCGCC 176
consensus_7853#1      TAATAAACTAGCGGAGTCGTTAGACGTACCGAAGGTTGAAGAGGTTGTCGATGTTCCG-- 278
                                                                                  

consensus_7853#0      GTCATACATTTCGAACCGATTCGACAGCACCTCCTGGGTGTAGTGCAC-CAATTGCCGCG 471
consensus_7853#4      ATCCTTAGTTTTCAATCAGTTTTACTTGCGTTCTGCAATCAAGAGGAT-TTCCTGGAGTG 187
consensus_7853#6      --------------GGCGGTGTCCCAGCACGCGGCCAAGGTTGCTGTT-GTGTAGTAGTG 45
consensus_7853#2      GCTCCAGTCGAAAAGCAGACCGACCAGGAATTGACGATTGAAGATCCGACCGTCATCGAA 276
consensus_7853#5      GCCTGCTTCGTTTACATTGTTTACAGCAAGCAAAGCAATAGAGGTTGTACTGCAATGGCA 183
consensus_7853#3      GCCCGATCTGCCGTTCCCGTTCACCGCGTCAACGTCTAGAAATGGCAA-CTTCGCGTGCG 235
consensus_7853#1      GACACGATCCCAGCACAGGTGAATGAGGACGCGAACGATGACGGTGATGAAGAAGAAATT 338
                                                                                  

consensus_7853#0      TGGCCGA--GCCGGCTGGCGTATGTACG-AACAGG-ATCGGCAGCATCACCGG--ATCCA 525
consensus_7853#4      CAGTGATC-GTCAGCTAACG---GTGCA-AAT----ATCGGCCGGAAAAGGTG--TAGCA 236
consensus_7853#6      TGGGAAGC-AGCTGCTTATG-----CTA-GAGAGA-AGGGACGGCGAAGCCCC--CTGCT 95
consensus_7853#2      AAGTACAG-AATAGCCGGTGATGTTGTG-AACAGA-ACCCTCCAAGCAATTGT--CAAAG 331
consensus_7853#5      CTGAGAGC-GTTGTTTGCCAG----CAG-AATTGC-ACAACTAAAACCAATCA--CCAAC 234
consensus_7853#3      GAAAGGGC-AGCGGATCCGGTTCGGGAG-GGCAGGTCTTTATGAAATCGTGCATTCCCAA 293
consensus_7853#1      CTGGAAGTTACCCGTGGATCTCAGCCAGCAAACGACGATGACGACGATGATGTGGATGAT 398
                                                                                  

consensus_7853#0      GCTGCGAAGGGTTGTACCCGGCCAGC-AGGAAGAGCAGATGCGCAC--ACATGTTAATGT 582
consensus_7853#4      TCCG-AACAGAATGGACCAACCCAAT-CGTGGACGCGGTCGCGGA---ACACGT-GGCG- 289
consensus_7853#6      CTCG-----GTTTGAACCCCCTCGACGCGAGGCGGTAAATTCTCAGCAAGGCATAAACGT 150
consensus_7853#2      AATGTGTTGCTGGTGCTTCAGTCAAAGAAATTTGCCAGAAGGGTGACAATATGCTGATGC 391
consensus_7853#5      CATG---GGCGGGGAATTTGGGCGGTGCGTTCCTGCCGAGCGGCGTCAACTGATAAAGGT 291
consensus_7853#3      AATGACCGAGACAGAGTTCTGTGCCTTGCTAACGGCGGAAGTGGAGGCGGACGGCAAAGT 353
consensus_7853#1      GATGATGCTGCATTCAGCGAGCTCGTGGACAACGACGGAGGAGAAGAGGAATATCTGGAG 458
                         *                                                        

consensus_7853#0      GCCCCGTCGAGTTTGGCGGACAGATGAGCTGGGCGTTTTCGTGCAGTATCGGTTTGTTGG 642
consensus_7853#4      GACCCGGCGGCAGCGGTGCGCAGCCGAACTGGAAGCAA--GGGCGGT---GGTCCCTCCC 344
consensus_7853#6      ATCGCTTCGTTACAAGCA---ATACAACCAGTACGCCATTTTACATATTCAGCCTCTC-- 205
consensus_7853#2      AT-GATACGGGAAAGAAATATAAGCATGATGAAGACATGAAGAAAGGCATTGCCTTCCCA 450
consensus_7853#5      CCCACCTTCGACTGGGA----AGATCCGCTGAATCTGGAATCACAGCTGAAGGAGGATGA 347
consensus_7853#3      GGACGTATGTAAAGTGTGCAACGACAATCTATGTAACG-CGAGCAGTACGCGAGTGTTGA 412
consensus_7853#1      AAGCTCCGTGCAGAGCAGCAGCGACGTGCAGCAGCGGAAGCAGAACGCAGAGCCGCTGCC 518
                                                                         *        

consensus_7853#0      GCATGAACTCTCCGACGCCGAATACGGCC-CGCAGAATGTCGGGCGTCTTCAGGAACT-T 700
consensus_7853#4      GCCC--ACCGTACGTTTCCGACCGCC-CC-CAGGAAGCAGCAGGCACTAGCGGAAATGGT 400
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      ACAT--GCCTCTCGGTGAACAACTGCATC-TGTCACTTTTCACCAGCGCGTAACGATCCG 507
consensus_7853#5      AATTGCGATTCGCGACTCGTTCCGCGCCTACTGCGAGGATAAGCTGCTGTCGCGCGTTAT 407
consensus_7853#3      CCGGTGCTTTGCTGCTGTTGACCGTTGGTCTAATTTTTCGCACGTAGCTAGGGGCGATTG 472
consensus_7853#1      GAGCCGGAAGAGGAAACTTCACAAATCCCCTCGAGGGCTGAAGAAGCTGATCGGTCCTAC 578
                                                                                  

consensus_7853#0      GGTCATGAATCGCAGCAGCGGACTCTTCATGTGTCCCATGGAGGCCACCGGGGCGGGGGC 760
consensus_7853#4      GGCCACGG-TAACGGCAATGGCAACGGCA--------ACGGAAATGGGAAATGGAGATCC 451
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      GACTACGTGCTGAAAGAGAACGATGTGGTCAAGATCGACATGGGCGCACACATCGACGGT 567
consensus_7853#5      CGAGGCGAACCGCAATGAGGTGTTCCACAAGGAGATTATG-------------------- 447
consensus_7853#3      TGTAACGGCCGCATATAAGCCGTACGACAGTCAGTGAGACTGAAAATAGACTTCTAATTC 532
consensus_7853#1      CAGGAAGAACTGAGACGGGCTGAGCAGCA---ACTCGATGAGAACAAGCCCCAGGAAGCG 635
                                                                                  

consensus_7853#0      ATTCATCTGGATGATCTTATCGTTGTATTCTGGCCGGGTGGAAGCCCTCACGGAGAATCC 820
consensus_7853#4      ATCCACCAGATCGGTCGTACCG--GTGGCACAGCGCGGCGGC------------------ 491
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      TTCATCGCGGTTGCG--------------------------------------------- 582
consensus_7853#5      ------------------------------------------------------------
consensus_7853#3      ATTCATTTAGT------------------------------------------------- 543
consensus_7853#1      CTGGCCGCTTTCGATCGTATAT-------------------------------------- 657
                                                                                  

consensus_7853#0      GGTCGTGCCCTGCGAGTGGCCCACGTACTGCAATCGTCGGTGTCCCGTTTGCTCCAGTTT 880
consensus_7853#4      ------------------------------------------------------------
consensus_7853#6      ------------------------------------------------------------
consensus_7853#2      ------------------------------------------------------------
consensus_7853#5      ------------------------------------------------------------
consensus_7853#3      ------------------------------------------------------------
consensus_7853#1      ------------------------------------------------------------
                                                                                  

consensus_7853#0      GTTGTCGCTCGTGGCCGGAATGTCGTAGCGTCCGTTTTCGTGC 923
consensus_7853#4      -------------------------------------------
consensus_7853#6      -------------------------------------------
consensus_7853#2      -------------------------------------------
consensus_7853#5      -------------------------------------------
consensus_7853#3      -------------------------------------------
consensus_7853#1      -------------------------------------------
                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)