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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7920#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1633 fasta sequence
[ATGTTTTTTTTTATTATTATTTGGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATATTATTGATAAATGTATATGTAGTTTATGCATTATCATCCACATTGCCTTGCCTGTCTCGTATTGAAATCTTTCAAAGCCAAAGAAAACATCCGATTTCATCGCTATTATATTGGTTCCTATTGTATGCCAGCTTTTCTCAGCACATTCTTTTCGTCTAATAGTTTCGAGCTCCACTGTTTATCGTCTTTTTTTTTTTGTTTTGCTTTGCGGACTTTGCGCGATTCGTTAAACTGTTGTTCAATCCATTTTTCGTTTACGGAGTTTGAGAATATTATTATGCGAATAACTAGGTTTTGTTTCGTTTTCGATTACTACGAGTCAATAGAGGTTGGAATGGGCGTGCCTTTGCACCACTACACCGGGGATGATCTGCAGTCTAGTATTGATTATTTGGCTGAAATCAAATGCTCAATGGATGCTAAATTCAAATATAATCTGCTACTCCTACAGCCTATTCAAATGGAATGGCATTCATACTCCAACAGAGGGGTTACAATGTTACAACTGAGAGACACGCGCTAGATTTTTGTTTTTGTCATTCAAAACACGAGAAAGAACGGAGCCATACATTTCGATGTTGTTAGCGCCATTTGCAACGAAAATACACACAGATAATAACATCCTTTTAGGATAACTAAACATATAACACGTCATGCAAATAATAACGAGCAAGCCCTATCTTGGAATGCAATTTCAGTTTAGAATGCGATGAATACTTGTTTAAGGAAATCTGGTTTTCTTACTAAAATATCAACTTCGGTCACAGTTTTGGTTTTGCAATTTGACAAACAGTGACTTGAGTGATTTTCTCTCACCTCGTGATGCCACAAGCCCAATACTGTTCATTGCAATACAGTGCAAAAATTGTCATAAACTGCAGTTTGAGAGCAAGTCATTAACACGGCAATAAGGCAAAAAATGCAAATTAAGCCCTGGAGATCTGTAAAATAATGCGGACCTTTAGCAAAAGCATGAGCGCACGTAAAATTAATGTTCAACAATACAACAAAACATAC-AAAAAAACACACACACTCACACATACAAAACGTACACACAAGAGCAAACAAAAGATAATCACATGATGTAAAAACGGTCTCTTTACGATTCGAGTAACCGGGAGAGCGGTGGTCCGTAAGGCTTACCGTTTCGTTTTTCGTAAATGTTAATATATCGCAGCAGTGCAGTACTGTCCTACAAGAGTAATGAGTTTC--GTCAGTTTTAGTCTCAGTTCCTACTAGGCATCATTGGGAAGTTGAGAAATAGGAGAACGATTAGCACACCTTCCCGCACGAAACGCAGCTTACAAGCAAATATAGTTACCCCCAAACTGTACCACTCGTACCACTGAGACACAACCGCGGCATCGAGGGATTCGGTCGCCCTTTCCGTTTTGCTTCATCAAGTTGCCAGTTTGTGCGAGCACGCAATCGGGTGTACACGTTCCGGTTCGCAGCATCTAGCGATAGAACTTCACCTCCGCATCGACGCAGTCTTTCATGAGTTCGTCCAGCTCGTGGCTAGCTT]
[+] EMBL CNS097HE [ATGTTTTTTTTTATTATTATTTGGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATATTATTGATAAATGTATATGTAGTTTATGCATTATCATCCACATTGCCTTGCCTGTCTCGTATTGAAATCTTTCAAAGCCAAAGAAAACATCCGATTTCATCGCTATTATATTGGTTCCTATTGTATGCCAGCTTTTCTCAGCACATTCTTTTCGTCTAATAGTTTCGAGCTCCACTGTTTATCGTCTTTTTTTTTTTGTTTTGCTTTGCGGACTTTGCGCGATTCGTTAAACTGTTGTTCAATCCATTTTTCGTTTACGGAGTTTGAGAATATTATTATGCGAATAACTAGGTTTTGTTTCGTTTTCGATTACTACGAGTCAATAGAGGTTGGAATGGGCGTGCCTTTGCACCACTACACCGGGGATGATCTGCAGTCTAGTATTGATTATTTGGCTGAAATCAAATGCTCAATGGATGCTAAATTCAAATATAATCTGCTACTCCTACAGCCTATTCAAATGGAATGGCATTCATACTCCAACAGAGGGGTTACAATGTTACAACTGAGAGACACGCGCTAGATTTTTGTTTTTGTCATTCAAAACACGAGAAAGAACGGAGCCATACATTTCGATGTTGTTAGCGCCATTTGCAACGAAAATACACACAGATAATAACATCCTTTTAGGATAACTAAACATATAACACGTCATGCAAATAATAACGAGCAAGCCCTATCTTGGAATGCAATTTCAGTTTAGAATGCGATGAATACTTGTTTAAGGAAATCTGGAAAAATTACTAAAA ]
[-] EMBL BX626799 [ TTTGCGCGATTCGTTAAACTGTTGTTCAAGCCATTTTTCGTTTAC GAGTTTGAGAATATTATTATGCGAATAACTAGGTTTTGTTTCGTTTTCGATTACTACGAGTCAATAGAGGTTGGAATGGGCGTGCCTTTGCACCACTACACCGGGGATGATCTGCAGTCTAGTATTGATTATTTGGCTGAAATCAAATGCTGAATGGATGCTAAATTCAAATATAATCTGCTACTACTACAGCCTATTCAAATGGAATGGCATTCATGCTCGAAAAGTGGAGTTACAATGTTACAACT GAGACACGCGCTAGATTTTCGTTTTTGCCACTCAAAACACGAGAAAGAACGGAGCCATACATTTCGATGTTGTTAGCGCCATTTGCAGCGAAAATACACACAGATAATAACATCCTTTTAGGATAACTAAACATATAACACGTCATGCAAATAATAACGAGCAAGCCCTATCTTGGAATGCAATTTCAGTTTAGAATGCGATGAATACTTGTTTAAGGAAATCTGGTTTTCTTACTAAAATATCAACTTCGGTCACAGTTTTGGTTTTGCAATTTGACAAACAGTGACTTGAGTGATTTTCTCTCACCTCGTGATGCCACAAGCCCAATACTGTTCATTGCAATACAGTGCAAAAATTGTCATAAACTGCAGTTTGAGAGCAAGTCATTAACACGGCAATAA ]
[-] EMBL CNS097HD [ GATTACTTTTTTTCAATAGAGGTTGGAATGGGCGTGCCTTTGCACCACTACACCGGGGATGATCTGCAGTCTAGTATTGATTATTTGGCTGAAATCAAATGCTCAATGGATGCTAAATTCAAATATAATCTGCTACTCCTACAGCCTATTCAAATGGAATGGCATTCATACTCCAACAGAGGGGTTACAATGTTACAACTGAGAGACACGCGCTAGATTTTTGTTTTTGTCATTCAAAACACGAGAAAGAACGGAGCCATACATTTCGATGTTGTTAGCGCCATTTGCAACGAAAATACACACAGATAATAACATCCTTTTAGGATAACTAAACATATAACACGTCATGCAAATAATAACGAGCAAGCCCTATCTTGGAATGCAATTTCAGTTTAGAATGCGATGAATACTTGTTTAAGGAAATCTGGTTTTCTTACTAAAATATCAACTTCGGTCACAGTTTTGGTTTTGCAATTTGACAAACAGTGACTTGAGCGATTTTCTCTCACCTCACGATGTCACAACTTCAATACTGTTCATTGCAATACAGTGCAAAAATTGTCATAAACTGCAGTTTGAGAGCGTATCATTAACACGGCAATAAGGCAAAAAATGCAAATTAAGCCCTGGAGATCTGTAAAATAATGCGGACCTTTAGCAAAAGCATGAGCGCACGTAAAATTAATGTTCAACAATACAACAAAACATACAAAAAAAACACACACACTCACACATACAAAACGTACACACAAGAGCAAACAAAAGATAATCACATGATGTAAAAACGGTCTCCTTACGATTCGATTAACCGGGAGAGCGGTGGTCCGTAAGGCTTACC ]
[-] EMBL BX608103 [ TGGCATTCATGCTCGAAAAGTGGAGTTACAATGTTACAACT GAGACACGCGCTAGATTTTCGTTTTTGCCACTCAAAACACGAGAAAGAACGGAGCCATACATTTCGATGTTGTTAGCGCCATTTGCAGCGAAAATACACACAGATAATAACATCCTTTTAGGATAACTAAACATATAACACGTCATGCAAATAATAACGAGCAAGCCCTATCTTGGAATGCAATTTCAGTTTAGAATGCGATGAATACTTGTTTAAGGAAATCTGGTTTTCTTACTAAAATATCAACTTCGGTCACAGTTTTGGTTTTGCAATTTGACAAACAGTGACTTGAGTGATTTTCTCTCACCTCGTGATGCCACAAGCCCAATACTGTTCATTGCAATACAGTGCAAAAATTGTCATAAACTGCAGTTTGAGAGCAAGTCATTAACACGGCAATAAGGCAAAAAATGCAAATTAAGCCCTGGAGATCTGTAAAATAATGCGGACCTTTAGCAAAAGCATGAGCGCACGTAAAATTAATGTTCAACAATACAACAAAACATAC AAAAAAACACACACACTCACACATACAAAACGTACACACAAGAGCAAACAAAAGATAATCACATGATGTAAAAACGGTCTCTTTACGATTCGAGTAACCGGGAGAGCGGTGGTCCGTAAGGCTTACCGTTTC ]
[+] EMBL BX624024 [ CTGGTTTTCTTACTAAAATATCAACTTCGGTCACAGTTTTGGNTTTGCANTTTGACAAACAGTGACTTGAGTGATTTTCTCTCACCTCGTGATGCCACAAGCCCAATACTGTTCATTGCAATACAGTGCAAAAATTGTn ]
[-] EMBL BX609722 [ GCCCAATACTGTTCATTGCAATACAGTGCAAAAATTGTCATAAACTGCAGTTTGAGAGCAAGTCATTAACACGGCAATAAGGCAAAAAATGCAAATTAAGCCCTGGAGATCTGTAAAATAATGCGGACCTTTAGCAAAAGCATGAGCGCACGTAAAATTAATGTTCAACAATACAACAAAACATAC AAAAAAACACACACACTCACACATACAAAACGTACACACAAGAGCAAACAAAAGATAATCACATGATGTAAAAACGGTCTCTTTACGATTCGAGTAACCGGGAGAGCGGTGGTCCGTAAGGCTTACCGTTTCGTTTTTCGTAAATGTTAATATATCGCAGCAGTGCAGTACTGTCCTACAAGAGTAATGAGTTTCGTGTCAGTTTTAGTCTCAGTTCCTACTAGGCATCATTGGGAAGTTGAGAAATAGGAGAACGATTAGCACACCTTCCCGCACGAAACGCAGCTTACAAGCAAATATAGTTACCCCCAAACTGTACCACTCGTACCACTGAGACACAACCGCGGCATCGAGGGATTCGGTCGCCCTTTCCGTTTTGCTTCATCAAGTTGCCAGTTTGTGCGAGCACGCAATCGGGTGTACACGTTCCGGTTCGCAGCATCTAGCGATAGAACTTCACCTCCGCATCGACGCAGTCTTTCATGAGTTCGTCCAGCTCGT ]
[-] EMBL BX606598 [ ACACACTCACACATACAAAACGTACACACAAGAGCAAACAAAAGATAATCACATGATGTAAAAACGGTCTCTTTACGATTCGAGTAACCGGGAGAGCGGTGGTCCGTAAGGCTTACCGTTTCGTTTTTCGTAAATGTTAATATATCGCAGCAGTGCAGTACTGTCCTACAAGAGTAATGAGTTTC GTCAGTTTTAGTCTCAGTTCCTACTAGGCATCATTGGGAAGTTGAGAAATAGGAGAACGATTAGCACACCTTCCCGCACGAAACGCAGCTTACAAGCAAATATAGTTACCCCCAAACTGTACCACTCGTACCACTGAGACACAACCGCGGCATCGAGGGATTCGGTCGCCCTTTCCGTTTTGCTTCATCAAGTTGCCAGTTTGTGCGAGCACGCAATCGGGTGTACACGTTCCGGTTCGCAGCATCTAGCGATAGAACTTCACCTCCGCCTCGACGCAGTCTTTCATGAGTTCGTCCAGCTCGTGGCTAGCTT]
consensusID : consensus_7920#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 405 fasta sequence
[GGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATATTATTGATAAATGTATATGTAGTTTATGCATTATCATCCACATTGCCTTGCCTGTCTCGTATTGAAATCTTTCAAAGCCAAAGAAAACATCCGATTTCATCGCTATTATATTGGTTCCTATCGTATGCCAGCTTTTCTCAGCACATTCTTTTCGTCTAATAGTTTCGAGCTCCACTGTTTATCGTCTTTTTATTATTATTTGGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATAATATTGATAAATGTATATGTAGTTTATGCATT]
[-] EMBL BX614413 [GGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATATTATTGATAAATGTATATGTAGTTTATGCATTATCATCCACATTGCCTTGCCTGTCTCGTATTGAAATCTTTCAAAGCCAAAGAAAACATCCGATTTCATCGCTATTATATTGGTTCCTATCGTATGCCAGCTTTTCTCAGCACATTCTTTTCGTCTAATAGTTTCGAGCTCCACTGTTTATCGTCTTTTTATTATTATTTGGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATAATATTGATAAATGTATATGTAGTTTATGCATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7920#0 ATGTTTTTTTTTATTATTATTTGGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACG 60
consensus_7920#1 ----------------------GGTTCATTACGAAGACGATCTTGTTGTTGCTTCACACG 38
**************************************
consensus_7920#0 ATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATATTATTGATAAAT 120
consensus_7920#1 ATCACATTTGGCGCATTCGGCCGACATAGGTTTTCGCATTTGGGTATATTATTGATAAAT 98
************************************************************
consensus_7920#0 GTATATGTAGTTTATGCATTATCATCCACATTGCCTTGCCTGTCTCGTATTGAAATCTTT 180
consensus_7920#1 GTATATGTAGTTTATGCATTATCATCCACATTGCCTTGCCTGTCTCGTATTGAAATCTTT 158
************************************************************
consensus_7920#0 CAAAGCCAAAGAAAACATCCGATTTCATCGCTATTATATTGGTTCCTATTGTATGCCAGC 240
consensus_7920#1 CAAAGCCAAAGAAAACATCCGATTTCATCGCTATTATATTGGTTCCTATCGTATGCCAGC 218
************************************************* **********
consensus_7920#0 TTTTCTCAGCACATTCTTTTCGTCTAATAGTTTCGAGCTCCACTGTTTATCGTCTTTTTT 300
consensus_7920#1 TTTTCTCAGCACATTCTTTTCGTCTAATAGTTTCGAGCTCCACTGTTTATCGTCTTTTTA 278
***********************************************************
consensus_7920#0 TTTTTGTTTTGCTTTGCGGACTTTGCGCGATTCGTTAAACTGTTGTTCAATCCATTTTTC 360
consensus_7920#1 TTATTATTTGGTT-------CATTACGAAGACGATCTTGTTGTTGCTTCACACGATCACA 331
** ** *** * * * ** ** * ***** * * * *
consensus_7920#0 GTTTACGGAGTTTGAGAATATTATTATGCGAATAACTAGGTTTTGTTTCGTTTTCGATTA 420
consensus_7920#1 TTTGGCGCATTCGGCCGACATAGGTTTTCGCAT--TTGGGTATAATATTGAT--AAATGT 387
** ** * * * * ** * * ** ** * *** * * * * * **
consensus_7920#0 CTACG-AGTCAATAGAGGTTGGAATGGGCGTGCCTTTGCACCACTACACCGGGGATGATC 479
consensus_7920#1 ATATGTAGTTTATGCATT------------------------------------------ 405
** * *** ** *
consensus_7920#0 TGCAGTCTAGTATTGATTATTTGGCTGAAATCAAATGCTCAATGGATGCTAAATTCAAAT 539
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 ATAATCTGCTACTCCTACAGCCTATTCAAATGGAATGGCATTCATACTCCAACAGAGGGG 599
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 TTACAATGTTACAACTGAGAGACACGCGCTAGATTTTTGTTTTTGTCATTCAAAACACGA 659
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 GAAAGAACGGAGCCATACATTTCGATGTTGTTAGCGCCATTTGCAACGAAAATACACACA 719
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 GATAATAACATCCTTTTAGGATAACTAAACATATAACACGTCATGCAAATAATAACGAGC 779
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 AAGCCCTATCTTGGAATGCAATTTCAGTTTAGAATGCGATGAATACTTGTTTAAGGAAAT 839
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 CTGGTTTTCTTACTAAAATATCAACTTCGGTCACAGTTTTGGTTTTGCAATTTGACAAAC 899
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 AGTGACTTGAGTGATTTTCTCTCACCTCGTGATGCCACAAGCCCAATACTGTTCATTGCA 959
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 ATACAGTGCAAAAATTGTCATAAACTGCAGTTTGAGAGCAAGTCATTAACACGGCAATAA 1019
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 GGCAAAAAATGCAAATTAAGCCCTGGAGATCTGTAAAATAATGCGGACCTTTAGCAAAAG 1079
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 CATGAGCGCACGTAAAATTAATGTTCAACAATACAACAAAACATACAAAAAAACACACAC 1139
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 ACTCACACATACAAAACGTACACACAAGAGCAAACAAAAGATAATCACATGATGTAAAAA 1199
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 CGGTCTCTTTACGATTCGAGTAACCGGGAGAGCGGTGGTCCGTAAGGCTTACCGTTTCGT 1259
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 TTTTCGTAAATGTTAATATATCGCAGCAGTGCAGTACTGTCCTACAAGAGTAATGAGTTT 1319
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 CGTCAGTTTTAGTCTCAGTTCCTACTAGGCATCATTGGGAAGTTGAGAAATAGGAGAACG 1379
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 ATTAGCACACCTTCCCGCACGAAACGCAGCTTACAAGCAAATATAGTTACCCCCAAACTG 1439
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 TACCACTCGTACCACTGAGACACAACCGCGGCATCGAGGGATTCGGTCGCCCTTTCCGTT 1499
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 TTGCTTCATCAAGTTGCCAGTTTGTGCGAGCACGCAATCGGGTGTACACGTTCCGGTTCG 1559
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 CAGCATCTAGCGATAGAACTTCACCTCCGCATCGACGCAGTCTTTCATGAGTTCGTCCAG 1619
consensus_7920#1 ------------------------------------------------------------
consensus_7920#0 CTCGTGGCTAGCTT 1633
consensus_7920#1 --------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||