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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7924#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1714 fasta sequence
[CCGCTCACCACGCGACCGGAACATCATATAAACAGTTGCGAAGTCTATTGAAAATTAATAGAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGTGGACGAAAACTCCCGTTCGACCCCTCGCGCCACGTTGTGTTTATCAGCCCGCTACGAATGCGACCAGCAACCCGGCCAGCAGGATGAAATCGGACATCGACTACAGGAACAAGCTCGTGCTGGCCCCGATGGTGCGCGTCGGCACGCTGCCGATGCGGCTGCTGGCCCTCGAGTACGGTGCCGACCTGGTGTACACGGAGGAAATCATCGACTGGAAGCTGCTGCGAGCGGAACGCCACACGAACGAGGTGCTCGGTACGATCGACTACATCGACACCACGGACGGTACGGTCGTGTTTCGTACCTGCCCGGACGAGCGGGGGAAGGTGGTGCTGCAGATTGGGACGGCATCGGCCGAGCGGGCTGTTGCCGTTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTGCCCGAAAGACTTTTCCATCAAGGGCGGTATGGGGGTGGCCCTGCTGTACGATCTGCCCCGTGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGATACCGGTGACGTGCAAGATCCGGGTCATGCCCGATCTGGACGAAACGGTCGCGCTGGCGAAGGAGCTGCAGTCCACCGGCATACGGGCGATCGGGGTGCACGGGCGCACCAAGATGGAGCGACCGCGCGATCCAGTTAATGAAGGCGCCATTGCCCGGGTAGCAAACGCATTGCACATTCCGGTCATTGCGAACGGTGGCTCACAAAGCATCACCCGCCGGCACGATATACTGCGGTTTGCGCAGCGCTGCTCCACAACGAGCGTGATGGTGGCCCGAGCCGCCGAATGGAACTGTTCCGTGTTCCGGGCGGACGGTCCGCTGCCACTGGACGACGTGATTCGGCGCTATCTGGAGCTGTCCGTCCGGTACGACAACTCGCCCTCGAACACCAAGTACTGCGTGCAGATGATGCTGCGCAGCCTGCAGGAGAGCCCGATCGGGCGCCGTCTCCTGGACAGCCAAACGATGCAGCAGATATGCGATATCTGGGAAATGGGCGAGTACTGTCGGGAAACGCAGCTCCGATACCATTTCGCTGGCATCAAGGGTCGACGCGCCTGTCGGCCACGCACGCAGTCTGGGGACGGTGGTCCGGTAGCGGAAGGCAACGAGCCGACCGCTAGCAAAAAGCGGTGCCTTGAGGAATCGCCGGACTCCGATCCGGAGCCGCTGAACGAGGAAAACGTTTGCTTTATACGGTCCAATTTTATTGACGACAATTCGCTGCCAAAATCCAAACTCTACCTGCACGCGGTACGGAACGGGCTGCCGCGGG-CCAGTACGAGGTGCAGCAGAAGGACAAACTGTTCCGGGCGACCATCCGGTTCGATGGCCAGCGCTACACCAGCTCGTTCTGGGAGAAGAATAAGCGATACGCGGAGCAGGCGGCCGCACTCGTGTGCCTGCTGAAGCGCGGGGTCGAGTCGCGCGACGAGCTGATACGGAATGGTGCGATGCTGCCGGCCAAAAATGGACCGGCCGCCGCTGTGGTGGAGCTGACCGACAGCAGCAAGACAGATGCTCCTGGGGAGAGTGAAACGAAACGGGGAGGCTCGACCGATGGTGGAAAGT]
[+] EMBL BM651294 [CCGCTCACCACGCGACCGGAACATCATATAAACAGTTGCGAAGTCTATTGAAAATTAATAGAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGTGGACGAAAACTCCCGTTCGACCCCTCGCGCCACGTTGTGTTTATCAGCCCGCTACGAATGCGACCAGCAACCCGGCCAGCAGGATGAAATCGGACATCGACTACAGGAACAAGCTCGTGCTGGCCCCGATGGTGCGCGTCGGCACGCTGCCGATGCGGCTGCTGGCCCTCGAGTACGGTGCCGACCTGGTGTACACGGAGGAAATCATCGACTGGAAGCTGCTGCGAGCGGAACGCCACACGAACGAGGTGCTCGGTACGATCGACTACATCGACACCACGGACGGTACGGTCGTGTTTCGTACCTGCCCGGACGAGCGGGGGAAGGTGGTGCTGCAGATTGGGACGGCATCGGCCGAGCGGGCTGTTGCCGTTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTGCCCGAAAGACTTTTCCATCAAGGGCGGTATGGGGGTGGCCCTGCTGTACGATCTGCCCCGTGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGATACCGGTGACGTGC ]
[+] EMBL BX602251 [ CTCACCACGCGACCGGAACATCATATAAACAGTTGCGAAGTTTATTGAAAATTAATAGAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGTGGACGAAAACTCCCGTTCGACCCCTCGCGCCACGTTGTGTTTATCAGCCCGCTACGAATGCGACCAGCAACCCGGCCAGCAGGATGAAATCGGACATCGACTACAGGAACAAGCTCGTGCTGGCCCCGATGGTGCGCGTCGGCACGCTGCCGATGCGGCTGCTGGCCCTCGAGTACGGTGCCGACCTGGTGTACACGGAGGAAATCATCGACTGGAAGCTGCTGCGAGCGGAACGCCACACGAACGAGGTGCTCGGTACGATCGACTACATCGACACCACGGACGGTACGGTCGTGTTTCGTACCTGCCCGGACGAGCGGGGGAAGGTGGTGCTGCAGATTGGGACGGCATCGGCCGAGCGGGCTGTTGCCGTTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTGCCCGAAAGACTTTTCCATCAAGGGC ]
[+] EMBL BM616906 [ ccgAAACAGTTGCGAAGTCTATTGAAAATTAATAGAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGTGGACGAAAACTCCCGTTCGACCCCTCGCGCCACGTTGTGTTTATCAGCCCGCTACGAATGCGACCAGCAACCCGGCCAGCAGGATGAAATCGGACATCGACTACAGGAACAAGCTCGTGCTGGCCCCGATGGTGCGCGTCGGCACGCTGCCGATGCGGCTGCTGGCCCTCGAGTACGGTGCCGACCTGGTGTACACGGAGGAAATCATCGACTGGAAGCTGCTGCGAGCGGAACGCCACACGAACGAGGTGCTCGGTACGATCGACTACATCGACACCACGGACGGTACGGTCGTGTTTCGTACCTGCCCGCACGAGCGGGGGAAGGTGGTGCTGCAGATTGGGACGGCATCGGCCGAGCGGGCTGTTGCCGTTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTGCC ]
[+] EMBL CNS093HN [ AGCAGGATGAAATCGGACATCGACTACAGGAACAAGCTCGTGCTGGCCCCGATGGTGCGCGCCGGCACGCTGCCGATGCGGCTGCTGGCCCTCGAGTACGGTGCCGACCTGGTGTACACGGAGGAAATCATCGACTGGAAGCTGCTGCGAGCGGAACGCCACACGAACGAG ]
[+] EMBL BX606149 [ ACTTTTCCATCAAGGGCGGTATGGGGGTGGCCCTGCTGTACGATCTGCCCCGAGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGATACCGGTGACGTGCAAGATCCGGGTCATGCCCGATCTGGACGAAACGGTCGCGCTGGCGAAGGAGCTGCAGTCCACCGGCATACGGGCGATCGGGGTGCACGGGCGCACCAAGATGGAGCGACCGCGCGATCCAGTTAATGAAGGCGCCATTGCCCGGGTAGCAAACGCATTGCACATTCCGGTCATTGCGAACGGTGGCTCACAAAGCATCACCCGCCGGCACGATATACTGCGGTTTGCGCAGCGCTGCTCCACAACGAGCGTGATGGTGGCCCGAGCCGCCGAATGGAACTGTTCCGTGTTCCGGGCGGACGGTCCGCTGCCACTGGACGACGTGATTCGGCGCTATCTGGAGCTGTCCGTCCGGTACGACAACTCGCCCTCGAACACCAAGTACTGCGTGCAGATGATGCTGCGCAGCCTGCAGGAGAGCCCGATCGGGCGCCGTCTCCTGGACAGCCAAACGATGCAGCAGATATGCGATATCTGGGAAATGGGCGAGTACTGTCGGGAAACGCAGCTCCGATACCATTTCGCTGGCATCAAGGGTCGACGCGCCTGTCGGCCACGCACGCAGTCTGGGGACGGTGGTCCGGTAGCGGAAGGCAACGAGCCGACCGCTAGCAAAAAGCGGTGCCTTGAGGAATCGCCGGACTCCGATCCGGAGCCGCTGAACGAGGAAAACGTTTGCTTTATACGGTCCAATTTTATT ACGACAATTCGCTGCCAAAATCCAAACTCTACCTGCACGCGGTACGGAACGGGCTGCCGCGGG CCAGTA ]
[+] EMBL BX602907 [ AAGGAGCTGCAGTCCACCGGCATACGGGCGATCGGGGTGCACGGGCGCACCAAGATGGAGCGACCGCGCGATCCAGTTAATGAAGGCGCCATTGCCCGGGTAGCAAACGCATTGCACATTCCGGTCATTGCGAACGGTGGCTCACAAAGCATCACCCGCCGGCACGATATACTGCGGTTTGCGCAGCGCTGCTCCACAACGAGCGTGATGGTGGCCCGAGCCGCCGAATGGAACTGTTCCGTGTTCCGGGCGGACGGTCCGCTGCCACTGGACGACGTGATTCGGCGCTATCTGGAGCTGTCCGTCCGGTACGACAACTCGCCCTCGAACACCAAGTACTGCGTGCAGATGATGCTGCGCAGCCTGCAGGAGAGCCCGATCGGGCGCCGTCTCCTGGACAGCCAAACGATGCAGCAGATATGCGATATCTGGGAAATGGGCGAGTACTGTCGGGAAACGCAGCTCCGATACCATTTCGCTGGCATCAAGGGTCGACGCGCCTGTCGGCCACGCACGCAGTCTGGGGACGGTGGTCCGGTAGCGGAAGGCAACGAGCCGACCGCTAGCAAAAAGCGGTGCCTTGAGGAATCGCCGGACTCCGATCCGGAGCCGCTGAACGAGGAAAACGTTTGCTTTATACGGTCCAATTTTATTGACGAACATTCGCTGCCAAAATCCAAACTC ]
[-] EMBL CNS09FDU [ CGCAGTCTGGGGACGGTGGTCCGGTAGCGGAAGGCAACGAGCCGACCGCTAGCAAAAAGCGGTGCCTTGAGGAATCGCCGGACTCCGATCCGGAGCCGCTGAACGAGGAAAACGTTTGCTTTATACGGTCCAATTTTATTGACGACAATTCGCTGCCAAAATCCAAACTCTACCTGCACGCGGTACGGAACGGGCTGCCGCGGGCCCAGTACGAGGTGCAGCAGAAGGACAAACTGTTCCGGGCGACCATCCGGTTCGATGGCCAGCGCTACACCAGCTCGTTCTGGGAGAAGAATAAGCGATACGCGGAGCAGGCGGCCGCACTCGTGTGCCTGCTGAAGCGCGGGGTCGAGTCGCGCGACGAGCTGATACGGAATGGTGCGATGCTGCCGGCCAAAAATGGACCGGCCGCCGCTGTGGTGGAGCTGACCGACAGCAGCAAGACAGATGCTCCTGGGGAGAGTGAAACGAAACGGGGAGGCTCGACCGATGGTGGAAAGT]
consensusID : consensus_7924#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 263 fasta sequence
[CACCACGCGACCGGAACATCATATAAACAGTTGCGAGTCTATTGAAATTAATAGAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTGCCCGAAAGACTTTTCCATCAAGGGCGGTATGGGGGTGAGCCCTGCTGTACGATCTGCCCCGAGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGAATACCG]
[+] EMBL CNS09FDT [CACCACGCGACCGGAACATCATATAAACAGTTGCGAGTCTATTGAAATTAATAGAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTGCCCGAAAGACTTTTCCATCAAGGGCGGTATGGGGGTGAGCCCTGCTGTACGATCTGCCCCGAGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGAATACCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7924#0 CCGCTCACCACGCGACCGGAACATCATATAAACAGTTGCGAAGTCTATTGAAAATTAATA 60
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GAAAAATACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGAACCTCCCGTGGGTGGAC 120
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GAAAACTCCCGTTCGACCCCTCGCGCCACGTTGTGTTTATCAGCCCGCTACGAATGCGAC 180
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 CAGCAACCCGGCCAGCAGGATGAAATCGGACATCGACTACAGGAACAAGCTCGTGCTGGC 240
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 CCCGATGGTGCGCGTCGGCACGCTGCCGATGCGGCTGCTGGCCCTCGAGTACGGTGCCGA 300
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 CCTGGTGTACACGGAGGAAATCATCGACTGGAAGCTGCTGCGAGCGGAACGCCACACGAA 360
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 CGAGGTGCTCGGTACGATCGACTACATCGACACCACGGACGGTACGGTCGTGTTTCGTAC 420
consensus_7924#1 -------------------CACCACGCGACCGGAAC--ATCATATAAACA-GTTGCGAGT 38
** ** * ** * ** * *** **
consensus_7924#0 CTGCCCGGACGAGCGGGGGAAGGTGGTGCTGCAGATTGGGACGGCATCGGCCGAGCGGGC 480
consensus_7924#1 CTATTGAAATTAATAGAAAAA--TACCCCAATACATTAAGTTTGGTGCTACAGCGAGTGA 96
** * * * ** * * * *** * * * * * * * *
consensus_7924#0 TGTTGCCGTTGGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTG 540
consensus_7924#1 ACCTCCCGT-GGGCAGATGATGCAAAACGATGTGGCCGCCATTGACGTGAACATGGGCTG 155
* **** **************************************************
consensus_7924#0 CCCGAAAGACTTTTCCATCAAGGGCGGTATGGGGGTG-GCCCTGCTGTACGATCTGCCCC 599
consensus_7924#1 CCCGAAAGACTTTTCCATCAAGGGCGGTATGGGGGTGAGCCCTGCTGTACGATCTGCCCC 215
************************************* **********************
consensus_7924#0 GTGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGA-TACCGGTGACGTGCAAG 658
consensus_7924#1 GAGCCAAGGCCATCCTCGAGGGGCTGGTGCAGGGCGTGCGGAATACCG------------ 263
* **************************************** *****
consensus_7924#0 ATCCGGGTCATGCCCGATCTGGACGAAACGGTCGCGCTGGCGAAGGAGCTGCAGTCCACC 718
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GGCATACGGGCGATCGGGGTGCACGGGCGCACCAAGATGGAGCGACCGCGCGATCCAGTT 778
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 AATGAAGGCGCCATTGCCCGGGTAGCAAACGCATTGCACATTCCGGTCATTGCGAACGGT 838
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GGCTCACAAAGCATCACCCGCCGGCACGATATACTGCGGTTTGCGCAGCGCTGCTCCACA 898
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 ACGAGCGTGATGGTGGCCCGAGCCGCCGAATGGAACTGTTCCGTGTTCCGGGCGGACGGT 958
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 CCGCTGCCACTGGACGACGTGATTCGGCGCTATCTGGAGCTGTCCGTCCGGTACGACAAC 1018
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 TCGCCCTCGAACACCAAGTACTGCGTGCAGATGATGCTGCGCAGCCTGCAGGAGAGCCCG 1078
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 ATCGGGCGCCGTCTCCTGGACAGCCAAACGATGCAGCAGATATGCGATATCTGGGAAATG 1138
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GGCGAGTACTGTCGGGAAACGCAGCTCCGATACCATTTCGCTGGCATCAAGGGTCGACGC 1198
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GCCTGTCGGCCACGCACGCAGTCTGGGGACGGTGGTCCGGTAGCGGAAGGCAACGAGCCG 1258
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 ACCGCTAGCAAAAAGCGGTGCCTTGAGGAATCGCCGGACTCCGATCCGGAGCCGCTGAAC 1318
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GAGGAAAACGTTTGCTTTATACGGTCCAATTTTATTGACGACAATTCGCTGCCAAAATCC 1378
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 AAACTCTACCTGCACGCGGTACGGAACGGGCTGCCGCGGGCCAGTACGAGGTGCAGCAGA 1438
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 AGGACAAACTGTTCCGGGCGACCATCCGGTTCGATGGCCAGCGCTACACCAGCTCGTTCT 1498
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GGGAGAAGAATAAGCGATACGCGGAGCAGGCGGCCGCACTCGTGTGCCTGCTGAAGCGCG 1558
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 GGGTCGAGTCGCGCGACGAGCTGATACGGAATGGTGCGATGCTGCCGGCCAAAAATGGAC 1618
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 CGGCCGCCGCTGTGGTGGAGCTGACCGACAGCAGCAAGACAGATGCTCCTGGGGAGAGTG 1678
consensus_7924#1 ------------------------------------------------------------
consensus_7924#0 AAACGAAACGGGGAGGCTCGACCGATGGTGGAAAGT 1714
consensus_7924#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||