cluster # 7946

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Anopheles gambiae
cluster # 7946 cluster # 7946 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7946#0 length = 1176 sequences # 4
consensus_7946#1 length = 1115 sequences # 1

consensus_7946#2 length = 1040 sequences # 2
consensus_7946#3 length = 704 sequences # 1

consensusID : consensus_7946#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1176
fasta sequence

                              [CCGATGATGAGCTGCACGTCAAGATTGGTGACTTTGGGCTAGCGACCAAGATAGAGTTCGACGGTGAGCGGAAGAAGACGCTCTGCGGCACGCCGAACTACATTGCGCCGGAAATACTGAACAAAAAGGGGCACAGCTACGAGGTGGACATTTGGTCGATTGGCTGCGTAATGTACACGCTGCTGGTCGGTCAGCCACCGTTCGAGACGAAGAGCCTGAAGGATACGTACAATCGGATCCGGAAGTGTGACTACCGGCTGCCTCCCACGCTTCGCAACACAGCGGCCGAAATGATCTGCGCCATGCTGCAGTCGGATCCGATGAAGCGGCCCCGAATTCACAAGCTGTTTGAGTTTGAGTTTCTGTCCGGCAGTCACATTCCGAACTCGTTGCCAATCTCCTGCCTTACGATGGCACCGCGAGCTGATCAGCTGGAGCAGGCGGAGCGTATGAACAGGAAGCCGCTATCGGAAATGAACGGCG-CCGGAGATGAAACGCGGTTCGAATCGTCATTCTTGAAGAACAATCTACATGATCCCATCACTGCCAGCGGTATGATTTCGCGCCACAACGATACGTACCGGGCGGATATTGAAACGTTGCACCGGGAACTAACGAAGCTGTTCCTGGCCAAACCAGCACGGCTAGCAAGTAATCTGGATGACGAAAATACGGATCCGGCCGTCCAGCCACTGTTCTGGGTGTCGAAATGGGTCGACTACAGTGACAAGTATGGGTTTGGGTATCAGCTCAGCGATGAGGGAATGGGTGTTATGTTCAACGACACCACCAAACTGATTATGCTTGCCAATGGACACAACGTGCACTTCATTGACAAGGAGGGCCAAGAATCGTACTGGGATGTGAACAGTTTCCCGCCGTATTTGGAGAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACG-ATGTGCGCGGTCGTAATGCACCTTACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTG-CCCGCTGATGCGTGCCG-TAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAAGAG]

[+] EMBL BM579237             [CCGATGATGAGCTGCACGTCAAGATTGGTGACTTTGGGCTAGCGACCAAGATAGAGTTCGACGGTGAGCGGAAGAAGACGCTCTGCGGCACGCCGAACTACATTGCGCCGGAAATACTGAACAAAAAGGGGCACAGCTACGAGGTGGACATTTGGTCGATTGGCTGCGTAATGTACACGCTGCTGGTCGGTCAGCCACCGTTCGAGACGAAGAGCCTGAAGGATACGTACAATCGGATCCGGAAGTGTGACTACCGGCTGCCTCCCACGCTTCGCAACACAGCGGCCGAAATGATCTGCGCCATGCTGCAGTCGGATCCGATGAAGCGGCCCCGAATTCACAAGCTGTTTGAGTTTGAGTTTCTGTCCGGCAGTCACATTCCGAACTCGTTGCCAATCTCCTGCCTTACGATGGCACCGCGAGCTGATCAGCTGGAGCAGGCGGAGCGTATGAACAGGAAGCCGCTATCGGAAATGAACGGCG CCGGAGATGAAACGCGGTTCGAATCGTCATTCTTGAAGAACAATCTACACGATCCAATCACTGCCAGCGGTATGATTTCGCGCCACAACGATACGTACCGGGCGGATATTGAAACGTTGCACCGGGAACTAACGAAGCTGTTCCTGGCCAAACCAGCACGGCTAGCAAGTAATCTGGATGACGAAAATACAGATCCGGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM580295             [CCGATGATGAGCTGCACGTCAAGATTGGTGACTTTGGGCTAGCGACCAAGATAGAGTTCGACGGTGAGCGGAAGAAGACGCTCTGCGGCACGCCGAACTACATTGCGCCGGAAATACTGAACAAAAAGGGGCACAGCTACGAGGTGGACATTTGGTCGATTGGCTGCGTAATGTACACGCTGCTGGTCGGTCAGCCACCGTTCGAGACGAAGAGCCTGAAGGATACGTACAATCGGATCCGGAAGTGTGACTACCGGCTGCCTCCCACGCTTCGCAACACAGCGGCCGAAATGATCTGCGCCATGCTGCAGTCGGATCCGATGAAGCGGCCCCGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM605944             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccgcccacGCGTCCGGAGATGAAACGCGGTTCGAATCGTCATTCTTGAAGAACAATCTACATGATCCCATCACTGCCAGCGGTATGATTTCGCGCCACAACGATACGTACCGGGCGGATATTGAAACGTTGCACCGGGAACTAACGAAGCTGTTCCTGGCCAAACCAGCACGGCTAGCAAGTAATCTGGATGACGAAAATACGGATCCGGCCGTCCAGCCACTGTTCTGGGTGTCGAAATGGGTCGACTACAGTGACAAGTATGGGTTTGGGTATCAGCTCAGCGATGAGGGAATGGGTGTTATGTTCAACGACACCACCAAACTGATTATGCTTGCCAATGGACACAACGTGCACTTCATTGACAAGGAGGGCCAAGAATCGTACTGGGATGTGAACAGTTTCCCGCCGTATTTGGAGAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACG ATGTGCGCGGTCGTAATGCACCTTACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTG CCCGCTGATGCGTGCCG TAAC                                                        ]
[+] EMBL BM594111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgCGCGGTTCGAATCGTCATTCTTGAAGAACAATCTACATGATCCCATCACTGCCAGCGGTATGATTTCGCGCCACAACGATACGTACCGGGCGGATATTGAAACGTTGCACCGGGAACTAACGAAGCTGTTCCTGGCCAAACCAGCACGGCTAGCAAGTAATCTGGATGACGAAAATACGGATCCGGCCGTCCAGCCACTGTTCTGGGTGTCGAAATGGGTCGACTACAGTGACAAGTATGGGTTTGGGTATCAGCTCAGCGATGAGGGAATGGGTGTTATGTTCAACGACACCACCAAACTGATTATGCTTGCCAATGGACACAACGTGCACTTCATTGACAAGGAGGGCCAAGAATCGTACTGGGATGTGAACAGTTTCCCGCCGTATTTGGAGAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGAATGTGCGCGGTCGTAATGCACCTTACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTGCCCCGCTGATGCGTGCCGATAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAAGAG]




>consensus_7946#0
CCGATGATGAGCTGCACGTCAAGATTGGTGACTTTGGGCTAGCGACCAAGATAGAGTTCG
ACGGTGAGCGGAAGAAGACGCTCTGCGGCACGCCGAACTACATTGCGCCGGAAATACTGA
ACAAAAAGGGGCACAGCTACGAGGTGGACATTTGGTCGATTGGCTGCGTAATGTACACGC
TGCTGGTCGGTCAGCCACCGTTCGAGACGAAGAGCCTGAAGGATACGTACAATCGGATCC
GGAAGTGTGACTACCGGCTGCCTCCCACGCTTCGCAACACAGCGGCCGAAATGATCTGCG
CCATGCTGCAGTCGGATCCGATGAAGCGGCCCCGAATTCACAAGCTGTTTGAGTTTGAGT
TTCTGTCCGGCAGTCACATTCCGAACTCGTTGCCAATCTCCTGCCTTACGATGGCACCGC
GAGCTGATCAGCTGGAGCAGGCGGAGCGTATGAACAGGAAGCCGCTATCGGAAATGAACG
GCGCCGGAGATGAAACGCGGTTCGAATCGTCATTCTTGAAGAACAATCTACATGATCCCA
TCACTGCCAGCGGTATGATTTCGCGCCACAACGATACGTACCGGGCGGATATTGAAACGT
TGCACCGGGAACTAACGAAGCTGTTCCTGGCCAAACCAGCACGGCTAGCAAGTAATCTGG
ATGACGAAAATACGGATCCGGCCGTCCAGCCACTGTTCTGGGTGTCGAAATGGGTCGACT
ACAGTGACAAGTATGGGTTTGGGTATCAGCTCAGCGATGAGGGAATGGGTGTTATGTTCA
ACGACACCACCAAACTGATTATGCTTGCCAATGGACACAACGTGCACTTCATTGACAAGG
AGGGCCAAGAATCGTACTGGGATGTGAACAGTTTCCCGCCGTATTTGGAGAAAAAGATGA
AGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTG
TAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCA
CGATGTGCGCGGTCGTAATGCACCTTACCAACGGCACTGTTCAGCTTAATTTCTCTGATC
ATCAAAAAATAATCCTCTGCCCGCTGATGCGTGCCGTAACGTTGATGGACAACAACAAAA
ACTTCCGCACGTACCGTTTCCAGACGATAATAAGAG

consensusID : consensus_7946#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1115
fasta sequence

                              [GAGGCAAGAATCGCCACGAGGTGTCACAGTTTCCCGCCGGTATTTGCGAGAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTTAAATGCCAGCTTAACCCAACAGGCGACTTGTTCCAGCGTCTCAAATTTCTCCTGAATCCATCCAACGAAACAAATTAAATCCTTCTGACCCCGGCTNGAATTGCGGTTGCCCCGTAACCGGTTGGAACTTGGGACCAACAAAGCNACAAGAAACTTTCCCCGCGAACGGTTACCCGGTTTCTTCCCCAGCGACCGGAATCAACTCACGGAGCCATTGGCTTGTTTCCGCCATTGGAATTCTTGGGTAAGCACCAAAGGATTACCGGAATAATTGGCCTTCCACCGGANGCAAAGGAATAAAGAAGGAAAACTTGGGTCCGGAAAACAAACTTAATCCCGTAACGAGGCGGTCACCCCCCTAAAGGGACGATNCAACCGAAAAGCCAAGCCGCCGCGCGATGCGGTCCGGTNACATTACACGCGGTTCTCAAACACAAATTCTCGGAGGNGTGGCCGGTTCACTATCATCTGCTAATTTCNATTAAGGATTATTACCCCGGATNNANCNGGCNTCTCGCACATTTAAACTCGTGGGNCGANCAAACAAAAAGTTNGAGGTTGGNCACAAGGCGCAACCAAGGGCGCACTTAAACATTCGGGAATTTCTGCGAAACGGGGCAACGCGGGTCATCCCTCNTAGACCTATACAGGCCGGACTGCTAGACGAGTTCCTATTGGGAACAACCCCCAACGANGAAAATCACCCCCACACACAAAAANACGCGGGGCTGACCTTCTCNACGCATNGAATTCACNGNGGCAGTTCAGCAACAGAAACCCTTCAAACACTCTTNACACGCGAAAAGACAAATTTGGGAGATCCCGTTTGGGCCACGCTTTCCACACANTCACCGGGGCATTCAACAACACCCGGGGCAACAGCACGCTTCTTCNTTACCCGGCGGAACTCGCGCACAN]

[+] EMBL AL696650             [GAGGCAAGAATCGCCACGAGGTGTCACAGTTTCCCGCCGGTATTTGCGAGAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTTAAATGCCAGCTTAACCCAACAGGCGACTTGTTCCAGCGTCTCAAATTTCTCCTGAATCCATCCAACGAAACAAATTAAATCCTTCTGACCCCGGCTNGAATTGCGGTTGCCCCGTAACCGGTTGGAACTTGGGACCAACAAAGCNACAAGAAACTTTCCCCGCGAACGGTTACCCGGTTTCTTCCCCAGCGACCGGAATCAACTCACGGAGCCATTGGCTTGTTTCCGCCATTGGAATTCTTGGGTAAGCACCAAAGGATTACCGGAATAATTGGCCTTCCACCGGANGCAAAGGAATAAAGAAGGAAAACTTGGGTCCGGAAAACAAACTTAATCCCGTAACGAGGCGGTCACCCCCCTAAAGGGACGATNCAACCGAAAAGCCAAGCCGCCGCGCGATGCGGTCCGGTNACATTACACGCGGTTCTCAAACACAAATTCTCGGAGGNGTGGCCGGTTCACTATCATCTGCTAATTTCNATTAAGGATTATTACCCCGGATNNANCNGGCNTCTCGCACATTTAAACTCGTGGGNCGANCAAACAAAAAGTTNGAGGTTGGNCACAAGGCGCAACCAAGGGCGCACTTAAACATTCGGGAATTTCTGCGAAACGGGGCAACGCGGGTCATCCCTCNTAGACCTATACAGGCCGGACTGCTAGACGAGTTCCTATTGGGAACAACCCCCAACGANGAAAATCACCCCCACACACAAAAANACGCGGGGCTGACCTTCTCNACGCATNGAATTCACNGNGGCAGTTCAGCAACAGAAACCCTTCAAACACTCTTNACACGCGAAAAGACAAATTTGGGAGATCCCGTTTGGGCCACGCTTTCCACACANTCACCGGGGCATTCAACAACACCCGGGGCAACAGCACGCTTCTTCNTTACCCGGCGGAACTCGCGCACAN]




>consensus_7946#1
GAGGCAAGAATCGCCACGAGGTGTCACAGTTTCCCGCCGGTATTTGCGAGAAAAAGATGA
AGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTG
TAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCA
CGATGTGCGCGGTCGTTAAATGCCAGCTTAACCCAACAGGCGACTTGTTCCAGCGTCTCA
AATTTCTCCTGAATCCATCCAACGAAACAAATTAAATCCTTCTGACCCCGGCTNGAATTG
CGGTTGCCCCGTAACCGGTTGGAACTTGGGACCAACAAAGCNACAAGAAACTTTCCCCGC
GAACGGTTACCCGGTTTCTTCCCCAGCGACCGGAATCAACTCACGGAGCCATTGGCTTGT
TTCCGCCATTGGAATTCTTGGGTAAGCACCAAAGGATTACCGGAATAATTGGCCTTCCAC
CGGANGCAAAGGAATAAAGAAGGAAAACTTGGGTCCGGAAAACAAACTTAATCCCGTAAC
GAGGCGGTCACCCCCCTAAAGGGACGATNCAACCGAAAAGCCAAGCCGCCGCGCGATGCG
GTCCGGTNACATTACACGCGGTTCTCAAACACAAATTCTCGGAGGNGTGGCCGGTTCACT
ATCATCTGCTAATTTCNATTAAGGATTATTACCCCGGATNNANCNGGCNTCTCGCACATT
TAAACTCGTGGGNCGANCAAACAAAAAGTTNGAGGTTGGNCACAAGGCGCAACCAAGGGC
GCACTTAAACATTCGGGAATTTCTGCGAAACGGGGCAACGCGGGTCATCCCTCNTAGACC
TATACAGGCCGGACTGCTAGACGAGTTCCTATTGGGAACAACCCCCAACGANGAAAATCA
CCCCCACACACAAAAANACGCGGGGCTGACCTTCTCNACGCATNGAATTCACNGNGGCAG
TTCAGCAACAGAAACCCTTCAAACACTCTTNACACGCGAAAAGACAAATTTGGGAGATCC
CGTTTGGGCCACGCTTTCCACACANTCACCGGGGCATTCAACAACACCCGGGGCAACAGC
ACGCTTCTTCNTTACCCGGCGGAACTCGCGCACAN

consensusID : consensus_7946#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1040
fasta sequence

                              [CCCCGAGGGTTGTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTG-CCGCTGATGCGTGCCGTAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACGATATGCTCACGAGAAGATAAAGAAACTGCTCGAAAAACTATCCTAAAGCGTCCCCAAGCACACGAACAGCGCGGAGGCGTATAAGGTTAAAATTGGGGCGTATTTTTCATATAGTATCCGTTTTGTTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGAGGTTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTTTTTATCGATAAAACTACTAACAACAATGATCTGCACTCATCGGATAAACGGAACATTCCGGAGGAATTTATTTGGTAGGATGTGAAGCAATCGTTTCGTTACTCTTTGGTAGCTTCATTATCTGTTACTTTTTGGATTTTATTTCGCTATACGCTATGCTTTTTTGTCCGTTTACCGTAAACTGCCAATTCACTCACCGTTTTTTTCCAAACAGGAAGATACGACGCGTTCCATCTTTTTGTATTGTGCGTATTCGCTATTCAGCTGAACAGAGAATATATAGAAATAGTAATCCGTTTTGATACGTTTTTATTGTGTTTAGTGCCGACGAGTGCTGTCGGTCGTATCATGTGCTCTCGGTAGCAGGGAACAGGGAAAAGTACGATTACAGCACCGACCGATCCTCCAAGTATTAGTGTAAATTAAATTTATTGTTACATATAGCGAAATACAACACCGTCTCAATCAACAACAATCGTGCGGCCTATCAGAGAATAAACAAAATAAAAAAAA]

[+] EMBL AL693810             [CCCCGAGGGTTGTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTG CCGCTGATGCGTGCCGTAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACGATATGCTCACGAGAAGATAAAGAAACTGCTCGAAAAACTATCCTAAAGCGTCCCCAAGCACACGAACAGCGCGGAGGCGTATAAGGTTAAAATTGGGGCGTATTTTTCATATAGTATCCGTTTTGTTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGAGGTTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTTTTTATCGATAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08KXF             [                                                                                                  ATACCTCATATGCATACCTGGTTCCCCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTGCCCGCTGATGCGTGCCGTAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACGATATGCTCACGAGAAGATAAAGAAACTGCTCGAAAAACTATCCTAAAGCGTCCCCAAGCACACGAACAGCGCGGAGGCGTATAAGGTTAAAATTGGGGCGTATTTTT ATATAGTATCCGTTTTGTTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGAGGTTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTTTTTATCGATAAAACTACTAACAACAATGATCTGCACTCATCGGATAAACGGAACATTCCGGAGGAATTTATTTGGTAGGATGTGAAGCAATCGTTTCGTTACTCTTTGGTAGCTTCATTATCTGTTACTTTTTGGATTTTATTTCGCTATACGCTATGCTTTTTTGTCCGTTTACCGTAAACTGCCAATTCACTCACCGTTTTTTTCCAAACAGGAAGATACGACGCGTTCCATCTTTTTGTATTGTGCGTATTCGCTATTCAGCTGAACAGAGAATATATAGAAATAGTAATCCGTTTTGATACGTTTTTATTGTGTTTAGTGCCGACGAGTGCTGTCGGTCGTATCATGTGCTCTCGGTAGCAGGGAACAGGGAAAAGTACGATTACAGCACCGACCGATCCTCCAAGTATTAGTGTAAATTAAATTTATTGTTACATATAGCGAAATACAACACCGTCTCAATCAACAACAATCGTGCGGCCTATCAGAGAATAAACAAAATAAAAAAAA]




>consensus_7946#2
CCCCGAGGGTTGTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCG
CTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGT
TCCGCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCT
CTGATCATCAAAAAATAATCCTCTGCCGCTGATGCGTGCCGTAACGTTGATGGACAACAA
CAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTT
GTACACCAAGATACGATATGCTCACGAGAAGATAAAGAAACTGCTCGAAAAACTATCCTA
AAGCGTCCCCAAGCACACGAACAGCGCGGAGGCGTATAAGGTTAAAATTGGGGCGTATTT
TTCATATAGTATCCGTTTTGTTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGA
TGAGGAGGTTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTTTTTATCGATAAAA
CTACTAACAACAATGATCTGCACTCATCGGATAAACGGAACATTCCGGAGGAATTTATTT
GGTAGGATGTGAAGCAATCGTTTCGTTACTCTTTGGTAGCTTCATTATCTGTTACTTTTT
GGATTTTATTTCGCTATACGCTATGCTTTTTTGTCCGTTTACCGTAAACTGCCAATTCAC
TCACCGTTTTTTTCCAAACAGGAAGATACGACGCGTTCCATCTTTTTGTATTGTGCGTAT
TCGCTATTCAGCTGAACAGAGAATATATAGAAATAGTAATCCGTTTTGATACGTTTTTAT
TGTGTTTAGTGCCGACGAGTGCTGTCGGTCGTATCATGTGCTCTCGGTAGCAGGGAACAG
GGAAAAGTACGATTACAGCACCGACCGATCCTCCAAGTATTAGTGTAAATTAAATTTATT
GTTACATATAGCGAAATACAACACCGTCTCAATCAACAACAATCGTGCGGCCTATCAGAG
AATAAACAAAATAAAAAAAA

consensusID : consensus_7946#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 704
fasta sequence

                              [AGAATCGCCCGAGGNTTATACTGGGATGTGAACAGTTTCCCGCCGTATTTGGTNAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTGCCCGCTGATGCGTGCCGTAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACGATATGCTCACGAGAAGATAAGGTTAAAATTGGGGCGTATTTTTATATAGTATCCGTAAGTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGAGGTTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTNTTTTATCGATAAAACTACTAACCAACAATGATCTGCACTCATCGGATAAACGGAACATACCGGAGGANATTTATTTGGTAGAGATGTGAAGCAATCGTATTCGATACTCTTTGGTAGCTTCATTATCTGTTANTTTAAGGATTTATTTCGCTATACGCTATGCTTATATGTACCGTTACGGTAAA]

[+] EMBL AL697602             [AGAATCGCCCGAGGNTTATACTGGGATGTGAACAGTTTCCCGCCGTATTTGGTNAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCTGGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTGCCCGCTGATGCGTGCCGTAACGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACGATATGCTCACGAGAAGATAAGGTTAAAATTGGGGCGTATTTTTATATAGTATCCGTAAGTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGAGGTTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTNTTTTATCGATAAAACTACTAACCAACAATGATCTGCACTCATCGGATAAACGGAACATACCGGAGGANATTTATTTGGTAGAGATGTGAAGCAATCGTATTCGATACTCTTTGGTAGCTTCATTATCTGTTANTTTAAGGATTTATTTCGCTATACGCTATGCTTATATGTACCGTTACGGTAAA]




>consensus_7946#3
AGAATCGCCCGAGGNTTATACTGGGATGTGAACAGTTTCCCGCCGTATTTGGTNAAAAAG
ATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAAGGCTGGCGCT
GGTGTAATGAACGTTGAAAGCGATCAAATCTCCCGTATACCTCATATGCATACCTGGTTC
CGCACGATGTGCGCGGTCGTAATGCACCTAACCAACGGCACTGTTCAGCTTAATTTCTCT
GATCATCAAAAAATAATCCTCTGCCCGCTGATGCGTGCCGTAACGTTGATGGACAACAAC
AAAAACTTCCGCACGTACCGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTG
TACACCAAGATACGATATGCTCACGAGAAGATAAGGTTAAAATTGGGGCGTATTTTTATA
TAGTATCCGTAAGTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGAGG
TTCTTTCTTGGTGGTTTGACCAGGATCCACACGGTCTTNTTTTATCGATAAAACTACTAA
CCAACAATGATCTGCACTCATCGGATAAACGGAACATACCGGAGGANATTTATTTGGTAG
AGATGTGAAGCAATCGTATTCGATACTCTTTGGTAGCTTCATTATCTGTTANTTTAAGGA
TTTATTTCGCTATACGCTATGCTTATATGTACCGTTACGGTAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7946#2      ------------------------------------------------------------
consensus_7946#3      -------AGAATCGCCCGAGGNTTATACTGGGATGTGAACAGTTTCCC-GCCGTATTTGG 52
consensus_7946#0      CCGATGATGAGCTGCACGTCAAGATTGGTGACTTTGGGCTAGCGACCAAGATAGAGTTCG 60
consensus_7946#1      ------------GAGGCAAGAATCGCCACGAGGTGTCACAGTTTCCCGCCGGTATTTGCG 48
                                                                                  

consensus_7946#2      ------CCCCGAGGGTTGTGACCTACTTCAAGC---GCTACATGATG----GAGCATCTG 47
consensus_7946#3      TNAAAAAGATGAAGCTGCTGACCTACTTCAAGC---GCTACATGATG----GAGCATCTG 105
consensus_7946#0      ACGGTGAGCGGAAGAAGACGCTCTGCGGCACGCCGAACTACATTGCGCCGGAAATACTGA 120
consensus_7946#1      AGAAAAAGATGAAGCTGCTGACCTACTTCAAGC---GCTACATGATG----GAGCATCTG 101
                                ** *     *  ** *  ** **    ******   *     *  *    

consensus_7946#2      GTAAAGGCTGGCGCTGGTGTAA--TGAACGTTGAAAGCGATCAAATCTCC--CGTATACC 103
consensus_7946#3      GTAAAGGCTGGCGCTGGTGTAA--TGAACGTTGAAAGCGATCAAATCTCC--CGTATACC 161
consensus_7946#0      ACAAAAAGGGGCACAGCTACGAGGTGGACATTTGGT-CGATTGGCTGCGTAATGTACACG 179
consensus_7946#1      GTAAAGGCTGGCGCTGGTGTAA--TGAACGTTGAAAGCGATCAAATCTCC--CGTATACC 157
                        ***    *** * * *   *  ** ** **     ****    *       *** ** 

consensus_7946#2      TCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGT-AA---TGCACCTAACCAA-- 157
consensus_7946#3      TCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGT-AA---TGCACCTAACCAA-- 215
consensus_7946#0      CTGCTGGTCGGTCAGCCACCGTTCGAGACGAAGAGCCTG-AAGGATACGTACAATCGGAT 238
consensus_7946#1      TCATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTTAAATGCCAGCTTAACCCAAC 217
                            *     * *   ***  ***   *    * *   **          ** *    

consensus_7946#2      -CGGCACTGT-----TCAGCTTAA-TTTCTCTGATCATCAAAAAAT------AATCCTCT 204
consensus_7946#3      -CGGCACTGT-----TCAGCTTAA-TTTCTCTGATCATCAAAAAAT------AATCCTCT 262
consensus_7946#0      CCGGAAGTGTGACTACCGGCTGCC-TCCCACGCTTCGCAACACAGCGGCCGAAATGATCT 297
consensus_7946#1      AGGCGACTTGTTCCAGCGTCTCAAATTTCTCCTGAATCCATCCAACGAAACAAATTAAAT 277
                        *  * *        *  **    *  * *        *   *        ***    *

consensus_7946#2      GCC-GCTGATGCGTGCCGTAACGTTGATG-GACAACAA---CAAAAACTTCCGCACGTAC 259
consensus_7946#3      GCCCGCTGATGCGTGCCGTAACGTTGATG-GACAACAA---CAAAAACTTCCGCACGTAC 318
consensus_7946#0      GCGCCATGCTGCAGTCGGATCCGATGAAGCGGCCCCGAATTCACAAGCTGTTTGAGTTTG 357
consensus_7946#1      CCTTCTGACCCCGGCTNGAATTGCGGTTGCCCCGTAACCGGTTGGAACTTGGGACCAACA 337
                       *         *     *    *  *  *   *            * **           

consensus_7946#2      CGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACG--AT 317
consensus_7946#3      CGTTTCCAGACGATAATAGAGCATGGCTGTTCGCATGATTTGTACACCAAGATACG--AT 376
consensus_7946#0      AGTTTCTGTCCGGCAGTC--ACATT-CCGAACTCGTTGCCAATCTCCTGCCTTACG--AT 412
consensus_7946#1      AAGCNACAAGAAACTTTCC-CCGCGAACGGTTACCCGGTTTCTTCCCCAGCGACCGGAAT 396
                                      *    *      *    *        *   *       **  **

consensus_7946#2      ATGCTCACGAGAAGATAAAGAAACTGCTCGAAAAACTATCCTAAAGCGTCCCCAAGCACA 377
consensus_7946#3      ATGCTCACGAGAAGATAA------------------------------------------ 394
consensus_7946#0      GGCACCGCGAGCTGATCAGCTGGAGCAGGCGGAGCGTATGAACAGGAAGCCGCTATCGGA 472
consensus_7946#1      CAACTCACGGAGCCATTGGCTTGTTTCCGCCATTGGAATTCTTGGGTAAGCACCAAAGGA 456
                           * **     **                                            

consensus_7946#2      CGAACAGCGCGGAGGCGTATAAGGTTAAAATTGGGGCGTATTTTTCATATAGTATCCGTT 437
consensus_7946#3      ----------------------GGTTAAAATTGGGGCGTATTTTT-ATATAGTATCCGTA 431
consensus_7946#0      AATGAACGGCGCCGGAG-ATGAAACGCGGTTCGAATCGTCATTCTTGAAGAACAATCTAC 531
consensus_7946#1      T--------TACCGGAA----TAATTGGCCTTCCACCGGAN-----GCAAAGGAATAAAG 499
                                                    *     **          * *  *      

consensus_7946#2      TTGTTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGA---GGTTCTTT 494
consensus_7946#3      --AGTTTCATAAGGCACAAAAGTGGTGCAGCACAGGATAATGATGAGGA---GGTTCTTT 486
consensus_7946#0      ATGATCCCATCACTGCCAGCGGTATGATTTCGCGCCACAACGATACGTACCGGGCGGATA 591
consensus_7946#1      AAGGAAAACTTGGGTCCGGAAAACAAACTTAATCCCGTAACGAGGCGGTCACCCCCCTAA 559
                               *      *                     ** **   *             

consensus_7946#2      CTTGGTGGTTTGACCAGGATCCACACGGTCTTTTTT-ATCGATAAAACTACTAAC-AACA 552
consensus_7946#3      CTTGGTGGTTTGACCAGGATCCACACGGTCTTNTTTTATCGATAAAACTACTAACCAACA 546
consensus_7946#0      TTGAAACGTTGCACCGGGAACTAACGAAGCTGTTCCTGGCCAAACCAGCACGGCTAGCAA 651
consensus_7946#1      AGGGACGATNCAACCGAAAAGCCAAGCCGCCGCGCGATGCGGTCCGGTNAC--ATTACAC 617
                              *   ***   *          *         *         **         

consensus_7946#2      ATGATCTGCACTCATCGGATAAACGGAACAT--TCCGG--AGGAA-TTTAT-TTGGTAG- 605
consensus_7946#3      ATGATCTGCACTCATCGGATAAACGGAACAT--ACCGG--AGGANATTTAT-TTGGTAGA 601
consensus_7946#0      GTAATCTGGA--TGACGAAAATACGGATCCG--GCCGTCCAGCCACTGTTC-TGGGTGTC 706
consensus_7946#1      GCGGTTCTCAAACA-CAAATTCTCGGAGGNGTGGCCGGTTCACTATCATCTGCTAATTTC 676
                          *    *     *  *    ****       ***           *       *   

consensus_7946#2      GATGTGAAGCAATCGT-TTCGTTACTCT----TTGGTAGCTTCATTATCTGTTACTTTTT 660
consensus_7946#3      GATGTGAAGCAATCGTATTCGATACTCT----TTGGTAGCTTCATTATCTGTTANTTTAA 657
consensus_7946#0      GAAATGGGTCGACTACAGTGACAAGTATGGGTTTGGGTATCAGCTCAGCGATGAGGGAAT 766
consensus_7946#1      NATTAAGGATTATTACCCCGGATNNANC-----NGGCNTCTCGCACATTTA--AACTCGT 729
                       *         *                      **          *      *      

consensus_7946#2      GGATTTTATTT----------CGCTATAC--GCTATGCTTTTTTGTCCGTTTACCGTAAA 708
consensus_7946#3      GGATTT-ATTT----------CGCTATAC--GCTATGCTTATATGTACCGTTACGGTAAA 704
consensus_7946#0      GGGTGTTATGTTCAACGACACCACCAAACTGATTATGCTTGCCAATGGACACAACGTGCA 826
consensus_7946#1      GGGNCGANCAA-----------ACAAAAAGTTNGAGGTTGGNCACAAGGCGCAACCAAGG 778
                      **                     * * *      * * *             *       

consensus_7946#2      CTGCCAATTCACTCACCGTTTTTTTCCAAACAGGAAGATACGACGCGTTCCATCTTTTTG 768
consensus_7946#3      ------------------------------------------------------------
consensus_7946#0      CTTCATTGACAAGGAGGGCCAAGAATCGTACTGGGATGTGAACAGTTTCCCGCCGTATTT 886
consensus_7946#1      GCGCACTTAAACATTCGGG-AATTTCTGCGAAACGGGGCAACGCGGGTCATCCCTCNTAG 837
                                                                                  

consensus_7946#2      TATTGTGCGTATTCGCTATTCAGCTGAACAGAGAATATATAGAAATAGTAATCCGTTTTG 828
consensus_7946#3      ------------------------------------------------------------
consensus_7946#0      GGAGAAAAAGATGAAGCTGCTGACCTACTTCAAGCGCTACATGATGGAGCATCTGGTAAA 946
consensus_7946#1      ACCTATACAGGCCGGACTGCTAGACGAGTTC-----CTATTGGGAACAACCCCCAACGAN 892
                                                                                  

consensus_7946#2      ATACGTTTTTATTGTGTTTAGTGCCGACGAGTGCTGTCGGTCGTATCATGTGCTCTCGGT 888
consensus_7946#3      ------------------------------------------------------------
consensus_7946#0      GGCTGGCGCTGGTGTAATGAACGTTGAAAG-------CGATCAAATCTCCCGTATACCTC 999
consensus_7946#1      GAAAATCACCCCCACACACAAAAANACGCG--------GGGCTGACCTTCTCNACGCATN 944
                                                                                  

consensus_7946#2      AGCAGGGAACAGGGAAAAGTACGATTACAGCACCGACCGATCCTCCAAGTATTAGTGTAA 948
consensus_7946#3      ------------------------------------------------------------
consensus_7946#0      ATATGCATACCTGGTTCCGCACGATGTGCGCGGTCGTAATGCACCTTACCAACGGCACTG 1059
consensus_7946#1      GAATTCACNGNGGCAGTTCAGCAACAGAAACCCTTCAAACACTCTTNACACGCGAAAAGA 1004
                                                                                  

consensus_7946#2      ATTAAATTTATTGTTACATATAGCGAAATACAACACCGTCTCAATCAACAACAATCGTGC 1008
consensus_7946#3      ------------------------------------------------------------
consensus_7946#0      TTCAGCTTAATTTCTCTGATCATCAAAAAATAATCCTCTGCCCGCTGATGCGTGCCGTAA 1119
consensus_7946#1      CAAATTTGGGAGATCCCGTTTGGGCCACGCTTTCCACACANTCACCGGGGCATTCAACAA 1064
                                                                                  

consensus_7946#2      GGCCTATCAGAGAATAAACAAAATAAAAAAAA------------------------- 1040
consensus_7946#3      ---------------------------------------------------------
consensus_7946#0      CGTTGATGGACAACAACAAAAACTTCCGCACGTACCGTTTCCAGACGATAATAAGAG 1176
consensus_7946#1      CACCCGGGGCAACAGCACGCTTCTTCNTTACCCGGCGGAACTCGCGCACAN------ 1115