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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1359 fasta sequence
[GACCCACGCGTCCGCCCGCGTCCGTGCGGATTTGGCTCGTGTTTCTTCTACGGGAAAAACAGTTTCTACTTCCAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACCGGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAACAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGGCCGAGCTGAACTTCCTCGACAGCTCCTTTGGGCCGACGCCGCAAGAATCAGCTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACCCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAAATTCAAACACAATTCTCCGACAATGCGTCACTCAAGCTGGACGAAATCGACCCGAACGTGCGCGAGATGTACAAGGGCGTGCGGGATGTGCTGAAGCGCTACCGTAACGGCAAAA-TTCCGAAAGCGTTCAAGCTCATCCCCAAGCTGCGCAACTGTGAACAGTTTCTGTACATTACGGAACCGCAGCAGTGGAGTGCGGCTGCCATGTTTCAGGCGACGCGCCTGTTTTGCTCCGGCCTTACCCAGCACATGGCCCAGCGGTTCTACAATCTCGTGCTGCTGCCACGTGTGCGCGACGATTTGGCCGAGTACGGGCGGCTGAATTTCTATCTGTATCGTTCGCTGAAAAAGGCCCTGTTCAAACCGGCCGCCTTTATGAAGGGCATCGTGCTGCCTCTGCTCGAGGCAGGCGACTGCACGCTGCGCGAGGCAATCATCATCGGCAGCGTGATTAGCTGCACGTCCATCCCGGTGCTGCACACGGCCGCGTGTTTGCTGAAAATCTGCGAAATGGAATACTCCGGCGCGTGTTCCGTGTTTATCCGCATCATACTGGACAAACGGTACGCCCTGCCGTACCGTGTGGTCGATGCGGCCGTGTTTCATTTCCTCAAGTTTGAGCAGGATAAGCGGGAGCTGCCCACGCTGTGGCACAAAGCGCTGCTTACGTTTGCCCAGCGCTACAAGAACGACATTTCCTCCGAGCAGCGGGACGCTTTGCTGCATTTGCTGAAGAAAAAATCCCATCCCAAAATCACACCTGAAATTCGCCGCGAACTGCAGGCAGCCCAGTGTCGCGATGTANAAGTTGGC]
[+] EMBL BM631093 [GACCCACGCGTCCGCCCACG CGTCCGGATTTGGCTCGTGTTTCTTGTACGGGGAAAACAGTTTCTACTTACAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACCGGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAACAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACTACAGGCCGAGCTGAACTTCCTCGACAGCTCCTTTGGGCCGACGCCGCAAGAATCAACTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACTCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAGATTCAAACACAATTCTCCGACAACGCGTCTCTCAAGCTGGACGAAATCGACCCGAACGTGCGCGAGATGTAC ]
[+] EMBL BM598662 [ CGACC CACGCGTCCG GCGGATTTGGCTCGTGTTTCTTCTACGGGAAAAACAGTTTCTACTTCCAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACCGGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAACAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGGCCGAGCTGAACTTCCTCGACAGCTCCTTTGGGCCGACGCCGCAAGAATCAGCTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACCCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAA ]
[+] EMBL BM600049 [ CCGCGCCAGTGCGGATTTGGCTCGTGTTTCTTCTACGGGAAAAACAGTTTCTACTTCCAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACCGGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAACAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGGCCGAGCTGAACTTCCTCGACAGCTCCTTTGGGCCGACGCCGCAAGAATCAGCTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACCCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAAATTCAAACACAATTCTCCGACAATGCGTCACTCAAGCTGGACGAAATCGACCCGAACGTGCGCGAGATGTACAAGGGCGTGCGGGATGTGCTGAAGCGCT ]
[+] EMBL BM594166 [ ccgGGCTCGTGTTTCTTCTACGGGAAAAACAGTTTCTACTTCCAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACCGGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAACAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGGCCGAGCTGAACTTCCTCGACAGCTCCTTTGGGCCGACGCCGCAAGAATCAGCTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACCCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAAATTCAAACACAATTCTCCGACAATGCGTCACTCAAGCTGGACGAAATCGACCCGAACGTGCGCGAGATGTACAAGGGCGTGCGGGATGTGCTGAAGCGCTACCGTAACGGCAAAATTTCCGAAAGCGTTCAAGCTCATCCCCAA ]
[+] EMBL BM648228 [ ccgGGCTCGTGTTTCTTCTACGGGAAAAACAGTTTCTACTTCCAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACCGGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAACAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGGCCGAGCTGAACTTCCTCGACAGCTCCTTTGGGCCGACGCCGCAAGAATCAGCTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACCCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAAATTCAAACACAATTCTCCGACAATGCGTCACTCAAGCTGGACGAAATCGACCCGAA ]
[+] EMBL BM647057 [ ccgGCTGCGGTGAAGAAACGGCAACGATTGGACGACAGAGGATCCTCCGACGAGTCTGATCTGGAGGAGCACGATGAAGGCGACATTGATGGAGACAATTTGTTTGACGATATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCCAAAACAAAGATGGCACCAAAACACGCACTCTGGCCGATATCATCTTGGAGAAAATGACTGAGAAGCAAACCGAGATTCAAACACAATTCTCCGACAACGCGTCTCTCAAGCTGGACGAAATCGACCCGAACGTGCGCGAGATGTACAAGGGCGTGCGGGATGTGCTGAAGCGCTACCGTAACGGCAAAA TTCCGAAAGCGTTCAAGCTCATCCCCAAGCTGCGCAACTGTGAACAGTTTCTGTACATTACGGAACCGCAGCAGTGGAGTGCGGCTGCCATGTTTCAGGCGACGCGCCTGTTTTGCTCCGGCCTTACCCAGCACATGGCCCAGCGGTTCTACAATCTCGTGCTGCTGCCACGTGTGCGCGACGATTTGGCCGAGTACGGGCGGCTGAATTTCTATCTGTATCGTTCGCTGAAAAAGGCCCTGTTCAAACCGGCCGCCTTTATGAAGGGCATCGTGCTGCCTCTGCTCGAGGCAGGCGACTGCACGCTGCGCGAGGCAATCATCATCGGCAGCGTGATTAGCTGCACGTCCATCCCGG ]
[+] EMBL BX625927 [ GAACGTGCGCGAGATGTACAAGGGCGTGCGGGATGTGCTGAAGCGCTACCGTAACGGCAAAA TTCCGAAAGCGTTCAAGCTCATCCCCAAGCTGCGCAACTGGGAACAGTTTCTGTACATTACGGAACCGCAGCAGTGGAGTGCGGCTGCCATGTTTCAGGCGACGCGCCTGTTTTGCTCCGGCCTTACCCAGCACATGGCCCAGCGGTTCTACAATCTCGTGCTGCTGCCACGTGTGCGCGACGATTTGGCCGAGTACGGGCGGCTGAATTTCTATCTGTATCGCTCGCTGAAAAAGGCCCTGTTCAAACCGGCCGCCTTTATGAAGGGAATCGTGCTGCCTCTGCTCGAGGCAGGTGATTGCACGCTGCGCGAGGCAATCATCATCGGCAGCGTGATTAGCTGCACGTCCATCCCGGTGCTGCACACGGCCGCGTGTTTGCTGAAAATCTGCGAAATGGAATACTCCGGCGCGTGTTCCGTGTTTATCCGCATCATACTGGACAAACGGTACGCCCTGCCGTACCGTGTGGTCGATGCGGCCGTGTTTCATTTCCTCAAGTTTGAGCAGGATAAGCGGGAGCTGCCCACGCTGTGGCACAAAGCGCTGCTTACGTTTGCCCAGCGCTACAAGAACGACATTTCCTCCGAGCAGCGGGACGCTTTGCTGCATTTGCTGAAGAAAAAATCCCATCCCAAAATCACACCTGAAATTCGCCGCGAACTGCAGGCAGCCCAGTGTCGCGATGTANAAGTTGGC]
consensusID : consensus_7950#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 496 fasta sequence
[TACGGACAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCAAGAAAGCAAAACAGCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGTGCCGAGCTGAACTTCCTCGACAGCTCCTTATGGGCCTGACGCCGCAAGAATCAGCTTGCGGTGAAGAAACGGCAACGGTTGGACGACCAGAGGATCCTCCGACGAGCTCTGATCCTGGCAGGAGGCCACCGATGCAACGGCGACATCGCACTGCGCAGAACAAATATTCTGCTCANTNGAACGCACTACTTCACGCACATCAGCCGAAGGAAANGCACTGAGCCGTTGCNGCCTGCAACATTGTTTCCAAACACAAACAGGCATTGGGCACCAAANAACCACGGCACCCCTGNNGCCCGACTATCACTCGTATGCGAAGNNAAAACTGACTGCACGCACACGCCG]
[+] EMBL AL696082 [TACGGACAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCAAGAAAGCAAAACAGCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAGAGAATTCTTGCGGTAGCTCGCAAACAACAGTGCCGAGCTGAACTTCCTCGACAGCTCCTTATGGGCCTGACGCCGCAAGAATCAGCTTGCGGTGAAGAAACGGCAACGGTTGGACGACCAGAGGATCCTCCGACGAGCTCTGATCCTGGCAGGAGGCCACCGATGCAACGGCGACATCGCACTGCGCAGAACAAATATTCTGCTCANTNGAACGCACTACTTCACGCACATCAGCCGAAGGAAANGCACTGAGCCGTTGCNGCCTGCAACATTGTTTCCAAACACAAACAGGCATTGGGCACCAAANAACCACGGCACCCCTGNNGCCCGACTATCACTCGTATGCGAAGNNAAAACTGACTGCACGCACACGCCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7950#0 GACCCACGCGTCCGCCCGCGTCCGTGCGGATTTGGCTCGTGTTTCTTCTACGGGAAAAAC 60
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 AGTTTCTACTTCCAATAAAAGATGGGCAAATCAAAGGCACACCGTATAAAGAAACTCACC 120
consensus_7950#1 ---------------------------------------------------------TAC 3
*
consensus_7950#0 GGACCAAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTCCAAGAAAGCAAAA 180
consensus_7950#1 GGAC-AAAATCGTCCTTTGACGAACAGCCGAACGAAGGCCGCGTGTC-AAGAAAGCAAAA 61
**** ****************************************** ************
consensus_7950#0 CAGCCGAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAG 240
consensus_7950#1 CAGC-GAAAATCCGACTGCGCGCCGAGGAAGGCAACTATGTTGACTCGAAAACGTCGAAG 120
**** *******************************************************
consensus_7950#0 AGAATTCTTGCGGTAGCTCGCAAACAACAG-GCCGAGCTGAACTTCCTCGACAGCTCCTT 299
consensus_7950#1 AGAATTCTTGCGGTAGCTCGCAAACAACAGTGCCGAGCTGAACTTCCTCGACAGCTCCTT 180
****************************** *****************************
consensus_7950#0 -TGGGCC-GACGCCGCAAGAATCAGCT-GCGGTGAAGAAACGGCAACGATTGGACGAC-A 355
consensus_7950#1 ATGGGCCTGACGCCGCAAGAATCAGCTTGCGGTGAAGAAACGGCAACGGTTGGACGACCA 240
****** ******************* ******************** ********* *
consensus_7950#0 GAGGATCCTCCGACGAG-TCTGATC-TGGAGGAGCACGATGAAGGCGACATTGATGGAGA 413
consensus_7950#1 GAGGATCCTCCGACGAGCTCTGATCCTGGCAGGAGGCCACCGATGCAACGGCGACATCG- 299
***************** ******* *** * * * * ** ** ** *
consensus_7950#0 CAATTTGTTTGACGA-TATTAAAATCAGCGAGGAAGATGAGCGTGCGCTGCAAATGTTCC 472
consensus_7950#1 CACTGCGCAGAACAAATATTCTGCTCANTNGAACGCACTACTTCACGC---ACATCAGCC 356
** * * ** * **** *** * * *** * ** **
consensus_7950#0 AAAACAAAGATGGCACCAAAACAC-GCACCCTGGCCGATATCATCTTGGAGAAAATGACT 531
consensus_7950#1 GAAGGAAAN---GCACTGAGCCGTTGCNGCCTG--CAACATTGTTTCCAAACACAAACAG 411
** *** **** * * ** **** * * ** * * * * *
consensus_7950#0 GAGAAGCAAACCGAAATTCAAACACAATTCTCCGACAATGC-GTCACTC--AAGCTGGAC 588
consensus_7950#1 GCATTGGGCACCAAANAACCACGGCACCCCTGNNGCCCGACTATCACTCGTATGCGAAGN 471
* * *** ** * * ** ** * * ****** * **
consensus_7950#0 GAAATCGACCCGAACGTGCGCGAGATGTACAAGGGCGTGCGGGATGTGCTGAAGCGCTAC 648
consensus_7950#1 NAAAACTGACTGCACGCACACGCCG----------------------------------- 496
*** * * * *** * **
consensus_7950#0 CGTAACGGCAAAATTCCGAAAGCGTTCAAGCTCATCCCCAAGCTGCGCAACTGTGAACAG 708
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 TTTCTGTACATTACGGAACCGCAGCAGTGGAGTGCGGCTGCCATGTTTCAGGCGACGCGC 768
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 CTGTTTTGCTCCGGCCTTACCCAGCACATGGCCCAGCGGTTCTACAATCTCGTGCTGCTG 828
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 CCACGTGTGCGCGACGATTTGGCCGAGTACGGGCGGCTGAATTTCTATCTGTATCGTTCG 888
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 CTGAAAAAGGCCCTGTTCAAACCGGCCGCCTTTATGAAGGGCATCGTGCTGCCTCTGCTC 948
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 GAGGCAGGCGACTGCACGCTGCGCGAGGCAATCATCATCGGCAGCGTGATTAGCTGCACG 1008
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 TCCATCCCGGTGCTGCACACGGCCGCGTGTTTGCTGAAAATCTGCGAAATGGAATACTCC 1068
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 GGCGCGTGTTCCGTGTTTATCCGCATCATACTGGACAAACGGTACGCCCTGCCGTACCGT 1128
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 GTGGTCGATGCGGCCGTGTTTCATTTCCTCAAGTTTGAGCAGGATAAGCGGGAGCTGCCC 1188
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 ACGCTGTGGCACAAAGCGCTGCTTACGTTTGCCCAGCGCTACAAGAACGACATTTCCTCC 1248
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 GAGCAGCGGGACGCTTTGCTGCATTTGCTGAAGAAAAAATCCCATCCCAAAATCACACCT 1308
consensus_7950#1 ------------------------------------------------------------
consensus_7950#0 GAAATTCGCCGCGAACTGCAGGCAGCCCAGTGTCGCGATGTANAAGTTGGC 1359
consensus_7950#1 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||