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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7952#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1056 fasta sequence
[AGGCAGAATCCCCGCGGTTTAGGATTGGCCATCTGCATTTCTGATGTCGTCTCATGAGACTTCATGAAATGCATCNATATGTTTCTCATCGAAGAACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATACGACGTGATTTGTGCCACATCTNGATTTCTAGATGTCGTCTCCATGCAGCTTCCATGCAACATGCCATCAAATATGTTAANCATCGCAAGATCTTCTTGTGGGTACCATNTGGCACCCGGGGAAGACCATCCCTGTGGGAATCGGTCATAGTCACAGNGTATAACCAGGCATTTGATAGAGACCGGGTATGGTACCAGCCGGAATACACCCTNGTACNANATTCTAAAAGACNATCATCCATTACGCAATCATGTACACCCGATTAACACACTAATAACATTGTACTATAACCACACACCAACTANAAAACCNCCAACGGAATCACTCNTAAAACACTTCAACCCCAAAGACCCCCGGCCNGNTATCNCCACACNGATCAACTTTCNTNACATGTCATCANCTCACTCCACGTATACACTNNTACTAAAATTCGCAGCCCACCCAAGCGCCNCATCTACANGNNGGGACGTCCCCACCTATGGGANACAACACGACGAATCAGCCACACNCATTAGGTTAAACCNCCCAGGGGGCCTCTNACAGGGGAGCAAAAAGGCGCANCANAGACTGNNGCCGGNACAACCCGCANTTACAAGCCCCTGGNGGGTCCCCCANCGTACGCACAANACGAACACTTAAAGNCCAACAAAANATTGGAACCCAGCGGCATAACNGAAGACACATAAACAAGCGGCGCAAGACAACNAACCCGGCGGAATCAACCACTANCAACACCNCACGGGCCCCCAAACACACCCGAATNGACTTGCCCNGAACNCACAGCCCCCCACCCGTGACACACTAGAACAACCGNNAANAACAAAACGAACCTTACCCGGCCCNGAGGNANCCCCACAAANGCGACCNGTCNCTACNCNACNCACATATGAGAACGCCAC]
[+] EMBL AL693382 [AGGCAGAATCCCCGCGGTTTAGGATTGGCCATCTGCATTTCTGATGTCGTCTCATGAGACTTCATGAAATGCATCNATATGTTTCTCATCGAAGAACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATACGACGTGATTTGTGCCACATCTNGATTTCTAGATGTCGTCTCCATGCAGCTTCCATGCAACATGCCATCAAATATGTTAANCATCGCAAGATCTTCTTGTGGGTACCATNTGGCACCCGGGGAAGACCATCCCTGTGGGAATCGGTCATAGTCACAGNGTATAACCAGGCATTTGATAGAGACCGGGTATGGTACCAGCCGGAATACACCCTNGTACNANATTCTAAAAGACNATCATCCATTACGCAATCATGTACACCCGATTAACACACTAATAACATTGTACTATAACCACACACCAACTANAAAACCNCCAACGGAATCACTCNTAAAACACTTCAACCCCAAAGACCCCCGGCCNGNTATCNCCACACNGATCAACTTTCNTNACATGTCATCANCTCACTCCACGTATACACTNNTACTAAAATTCGCAGCCCACCCAAGCGCCNCATCTACANGNNGGGACGTCCCCACCTATGGGANACAACACGACGAATCAGCCACACNCATTAGGTTAAACCNCCCAGGGGGCCTCTNACAGGGGAGCAAAAAGGCGCANCANAGACTGNNGCCGGNACAACCCGCANTTACAAGCCCCTGGNGGGTCCCCCANCGTACGCACAANACGAACACTTAAAGNCCAACAAAANATTGGAACCCAGCGGCATAACNGAAGACACATAAACAAGCGGCGCAAGACAACNAACCCGGCGGAATCAACCACTANCAACACCNCACGGGCCCCCAAACACACCCGAATNGACTTGCCCNGAACNCACAGCCCCCCACCCGTGACACACTAGAACAACCGNNAANAACAAAACGAACCTTACCCGGCCCNGAGGNANCCCCACAAANGCGACCNGTCNCTACNCNACNCACATATGAGAACGCCAC]
consensusID : consensus_7952#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 914 fasta sequence
[CCGAAGTAATGGCAATGCTCGGCCAGCATCACGATAAGATCGAATTTTTGGAACAAAGTGGCTTTTCGCGAAACAAGAGACCATAAACCGATGCCGCAGTGGCGCAACATAAAGCACAGTACAGATGGCAAGCAACATGCAAGTAAAAGACTGCATGCTGTGCCGTGACGAAATGGTTGAATCCACCGATAAAGCGATCTTAGCGTTAGTACAAGAGGCCACGCAATATTTTC------ATCCGG-TTGATCTCTATTTGATTCAGGATGATAATGATGTCTCATAACATAATGAATGAAGGAATAGCAATCTGATTTCTGATG--G-CTTACGAGCTTCA-AGAAATGCATAAACGCATTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAA------GCAATCTGATTTCTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTT]
[+] EMBL BM620131 [CCGAAGTAATGGCAATGCTCGGCCAGCATCACGATAAGATCGAATTTTTGGAACAAAGTGGCTTTTCGCGAAACAAGAGACCATAAACCGATGCCGCAGTGGCGCAACATAAAGCACAGTACAGATGGCAAGCAACATGCAAGTAAAAGACTGCATGCTGTGCCGTGACGAAATGGTTGAATCCACCGATAAAGCGATCTTAGCGTTAGTACAAGAGGCCACGCAATATTTTC ATCCGG TTGATCTCTATTTGATTCAGGATGATAATGATGTCTCATAACATAATGAATGAAGGAATAGCAATCTGATTTCTGATG G CTTACGAGCTTCA AGAAATGCATAAACGCATTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAA GCAATCTGATTTCTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCT ]
[+] EMBL CNS09GV4 [ GGCAATGC CGGTCAGCATCACGATAAGATCGAATTTTTGGAACAAAGTGGCTTTTCGCGAAACAAGAGACCATAAACCGATGCCGCAGTGGCGCAACATAAAGCACAGTACAGATGGCAAGCAACATGCAAGTAAAAGACTGCATGCTGTGCCGTGACGAAATGGTTGAATCCACCGATAAAGCGATCTTAGCGTTAGTACAAGAGGCCACGCAATATTTTCCTGGTAAACAGGATCGATCTCTATTTGATTCAGGATGATAATGATGTCTCATAACATAATGAATGAAGGAATAGCAATCTGATTCCTGATGTCGTCTTACAAGCTTCATAAAAATGCACCAACGTGTATTCATCGAAGGATTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTT]
consensusID : consensus_7952#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 850 fasta sequence
[ATTTTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGAACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGTATGCAAAGGAAAACCCAAATTGATTTTTTAACAGGATTGGCAATTTGATTCCTGATGTCGTCTTACAAGCTTCAATATGTTAGCATTCATATGTTTTCATCAAAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTTAAAT]
[-] EMBL CNS09GV5 [ATTTTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGAACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGTATGCAAAGGAAAACCCAAATTGATTTTTTAACAGGATTGGCAATTTGATTCCTGATGTCGTCTTACAAGCTTCAATATGTTAGCATTCATATGTTTTCATCAAAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTTAAAT]
consensusID : consensus_7952#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 745 fasta sequence
[GCATCAATATGTTTTCATCGAAGCAATCTGATTTCTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGAATAGCAATCTGATTTCTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGAACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTTAAATACCACCCGCGTTCAAGTATTTAATTTCATTTAGTTTATTTAATTCGACACAGCAATAGGCTCCCTTGAAAGCAACACATGTACACAGGCTTAGGAAGCAATTGCGGAACATACCGTGTTCATGAAGATAGCAAATGACGG]
[+] EMBL BX621293 [GCATCAATATGTTTTCATCGAAGCAATCTGATTTCTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGGAATAGCAATCTGATTTCTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGAACTGGCAATCTGATTTCTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTTAAATACCACCCGCGTTCAAGTATTTAATTTCATTTAGTTTATTTAATTCGACACAGCAATAGGCTCCCTTGAAAGCAACACATGTACACAGGCTTAGGAAGCAATTGCGGAACATACCGTGTTCATGAAGATAGCAAATGACGG]
consensusID : consensus_7952#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence
[CCGTACTTATTGTACAATTGCTTGAATTTCTTCAACCGATGGTGTATTAACCAGTGGGGAATTTTTGTTCTCTGATAGCAACAAAGCACAAATCATTTGACTTACAATTTAGTATGCAAAGGAAAACCCAAATTGATTTTTTAACAGGATTGGCAATTTGATTCCTGATGTCGTCTTACAAGCTTCAATATGTTAGCATTCATATGTTTTCATCAAAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTTAAATACCACCCGCGTTCAAGTATTTAATTTCATTTAGTTTATTTAATTCGACACAGCAATAGGCTCCCTTGAAAGCAACACATGTACACAGGCTTAGGAAGCAATTGCGGAACATACCGTGTTCATGAAGATAGCAAATGACGGTAGAATAAGGTAGAACGGTTCTAAACAGGCCAAACGTGTGCGACAGTCTTTGATGGCGATTAGATCGCGGATACAAAGTCTTCTAGTTGGAGCATATAAAATTGATTTTGGATAGAAGAAAGGGAAAACCACTACGTTAGTTTAGGA]
[+] EMBL BM609472 [CCGTACTTATTGTACAATTGCTTGAATTTCTTCAACCGATGGTGTATTAACCAGTGGGGAATTTTTGTTCTCTGATAGCAACAAAGCACAAATCATTTGACTTACAATTTAGTATGCAAAGGAAAACCCAAATTGATTTTTTAACAGGATTGGCAATTTGATTCCTGATGTCGTCTTACAAGCTTCAATATGTTAGCATTCATATGTTTTCATCAAAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTTAAATACCACCCGCGTTCAAGTATTTAATTTCATTTAGTTTATTTAATTCGACACAGCAATAGGCTCCCTTGAAAGCAACACATGTACACAGGCTTAGGAAGCAATTGCGGAACATACCGTGTTCATGAAGATAGCAAATGACGGTAGAATAAGGTAGAACGGTTCTAAACAGGCCAAACGTGTGCGACAGTCTTTGATGGCGATTAGATCGCGGATACAAAGTCTTCTAGTTGGAGCATATAAAATTGATTTTGGATAGAAGAAAGGGAAAACCACTACGTTAGTTTAGGA]
consensusID : consensus_7952#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 578 fasta sequence
[CCAAGAATCGGCACCAGGTGATTCCTGATGTCGTCTTACAAGCTTCAAATATGTTAGCATTCATATGTTTTCATCAAAGGTAAATCACGAATTCAATGATATTGCACTAACAAGATTCGTTGTTGCTATACGATGAGTTACTTATTGTACTATTGCTTGAATTTCTTCAACCGATAGTTTGTTAACCTGTAAGGAATTTTTGTTCACTGATAGTAACAAACAATAATGCAAAGCAAAACAATAATTAATTTTATTTTATGTTTGACGAACTGGTGATTGCATGAAAAAAAAAATCCAAGAGGAAGATTTATTCTTTAACTGCAACAAACCATTTAAAATGTTCACTTTAAATATGGTGTGTGTCTTTTCGTACAGTAATATTATGTATTTCCTTTTTTCTTTTGGTCATGATATCCCTACTTAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCT]
[+] EMBL BX466441 [CCAAGAATCGGCACCAGGTGATTCCTGATGTCGTCTTACAAGCTTCAAATATGTTAGCATTCATATGTTTTCATCAAAGGTAAATCACGAATTCAATGATATTGCACTAACAAGATTCGTTGTTGCTATACGATGAGTTACTTATTGTACTATTGCTTGAATTTCTTCAACCGATAGTTTGTTAACCTGTAAGGAATTTTTGTTCACTGATAGTAACAAACAATAATGCAAAGCAAAACAATAATTAATTTTATTTTATGTTTGACGAACTGGTGATTGCATGAAAAAAAAAATCCAAGAGGAAGATTTATTCTTTAACTGCAACAAACCATTTAAAATGTTCACTTTAAATATGGTGTGTGTCTTTTCGTACAGTAATATTATGTATTTCCTTTTTTCTTTTGGTCATGATATCCCTACTTAGATCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGTTGTTACAGCATTGTGGACCGGGTTGTCAGCGATACACCTGACAATTCTAAAGACATCATCATCGAATCATGTCACCGCTTTTCACTAATAATGTCT]
consensusID : consensus_7952#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 474 fasta sequence
[CCGAGGTTATTGTNGCATATGATGAGTCACTTATTGTACACTTGCTTGAATTTCTTCAACCGATGGTGTATTAACCAGTGGGGAATTNTTTGTTCTCTGACTAGCAACAAAGCGACAAATCATTTGATATACAATTGTGTCATTGCCACNAGGCAAAACCACATAATNTNGCATTTGTCATTTNNATAGTTTATCACATTTTACCAGGCATTGGCCAATCTAGATTTCTGATGTCTATACGAGCTTCAAGCACACATGCCATNANAACGCCNTTTTCCATCGCACAGGGATATAGGCAATCTAGATATATCTNGATGTCACGTCTCCATGGAGCTATCATGCAAATGCATCGCACATCATAGTAAATATCCATCCGCACAGGTAACTTGGGCCACATCNTAGATATATCTTGCATTGTCTATAACGAGCTATCGAAGATATTGCNATTAAACGCCATTTCTCNATCGCAGGATA]
[+] EMBL AL933159 [CCGAGGTTATTGTNGCATATGATGAGTCACTTATTGTACACTTGCTTGAATTTCTTCAACCGATGGTGTATTAACCAGTGGGGAATTNTTTGTTCTCTGACTAGCAACAAAGCGACAAATCATTTGATATACAATTGTGTCATTGCCACNAGGCAAAACCACATAATNTNGCATTTGTCATTTNNATAGTTTATCACATTTTACCAGGCATTGGCCAATCTAGATTTCTGATGTCTATACGAGCTTCAAGCACACATGCCATNANAACGCCNTTTTCCATCGCACAGGGATATAGGCAATCTAGATATATCTNGATGTCACGTCTCCATGGAGCTATCATGCAAATGCATCGCACATCATAGTAAATATCCATCCGCACAGGTAACTTGGGCCACATCNTAGATATATCTTGCATTGTCTATAACGAGCTATCGAAGATATTGCNATTAAACGCCATTTCTCNATCGCAGGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7952#0 ----AGGCAGAATCCCCGCGGTTTAGGATTGGCCATCTGCATTTCTGATGTCGTCTCATG 56
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 CCGAAGTAATGGCAATGCTCGGCCAGCATCACGATAAGATCGAATTTTTGGAACAAAGTG 60
consensus_7952#2 ------------------------------------------------------------
consensus_7952#3 ------------------------------------------------------------
consensus_7952#4 ------------------------------------------------------------
consensus_7952#5 ------------------------------------------------------------
consensus_7952#0 AGACTTCATGAAATGCATCNATATGTTTCTCATCGAAGAACTGGCAATCTGATTTCTGAT 116
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 GCTTTTCGCGAAACAAGAGACCATAAACCGATGCCGCAGTGGCGCAACATAAAGCACAGT 120
consensus_7952#2 ------------------------------------------------------------
consensus_7952#3 ------------------------------------------------------------
consensus_7952#4 ------------------------------------------------------------
consensus_7952#5 ------------------------------------------------------------
consensus_7952#0 GTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATACGACGTGATTTGTGCCACAT 176
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 ACAGATGGCAAGCAACATGCAAGTAAAAGACTG-CATGCTGTGCCGTGACGAAATGGTTG 179
consensus_7952#2 -------------ATTTTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTC----TTA 43
consensus_7952#3 ------------------------------------------------------------
consensus_7952#4 ------------------------------------------------------------
consensus_7952#5 ------------------------------------------------------------
consensus_7952#0 CTNGATTTCTAGATGTCGTCTCCATGCAGCTTCCATGCAACATGCCATCAAATATGTTAA 236
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 AATCCACCGATAAAGCGATCTTAGCGTTAGTACAAGAGGCCACGCAATATTTTCATCCGG 239
consensus_7952#2 CGAGCTTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATT-TCTGA 102
consensus_7952#3 ------------------------------------------------------------
consensus_7952#4 -------------------------------------CCGTACTTATTGTACAATTGCTT 23
consensus_7952#5 ------------------------------------------------------------
consensus_7952#0 NCATCGCAAGATCTTCTTGTGGGTACCATNTGGCACCCGGGGAAGACCATCCCTGTGGGA 296
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 TTGATCTCTATTTGATTCAGGATGATAATGATGTCTCATAACATAATGAATGAAGGAATA 299
consensus_7952#2 TGTCGTCTCATGAGCTTCATGA-------AATGCATCAATATGTTTTCATCGAAGGATTG 155
consensus_7952#3 --------------------------------GCATCAATATGTTTTCATCGAAG----- 23
consensus_7952#4 GAATTTCTTCAACCGATGGTGTATTAACCAGTGGGGAATTTTTGTTCTCTGATAGCAACA 83
consensus_7952#5 ------------------------------------------------------------
consensus_7952#0 ATCGGTCATAGTCACAGNGTATAACCAGGCATTTGATAGAGACCGGGTATGGTACCAGCC 356
consensus_7952#6 ----------------------------------------------------------CC 2
consensus_7952#1 GCAATCTGATTTCTGATGGC---TTACGAGCTTCAAGAAATGCATAAACGCATTTTCATC 356
consensus_7952#2 GCAATCTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATC 215
consensus_7952#3 -CAATCTGATTTCTGATGGC---TTACGAGCTTCAAGAAATGCATAAACGCATTTTCATC 79
consensus_7952#4 AAGCACAAATCATTTGACTTACAATTTAGTATGCAAAGGAAAACCCAAATTGATTTTTTA 143
consensus_7952#5 -----------------------------------------------------------C 1
consensus_7952#0 GGAATACACCCTNGTACNANATTCTAAAAGACN-ATCATCCA-TTACGCAATCATGTACA 414
consensus_7952#6 GAGGT----TATTGTNGCATATGATGAGTCACTTATTGTACACTTGCTTGAATTTCTTCA 58
consensus_7952#1 GAAGTAC-TGGCA--ATCTGATTTCTGATGTC---TTACGAGCTT-CAA-GATAT--GCA 406
consensus_7952#2 GAAGGAT-TGGCA--ATCTGATTTCTGATGTCGTCTCATGAGCTT-CAT-GAAAT--GCA 268
consensus_7952#3 GAAGGAT-TGGCA--ATCTGATTTCTGATGTCGTCTCATGAGCTT-CAT-GAAAT--GCA 132
consensus_7952#4 ACAGGAT-TGGCA--ATTTGATTCCTGATGTCGTCTTACAAGCTT-CAA-TATGTTAGCA 198
consensus_7952#5 CAAGAAT-CGGCACCAGGTGATTCCTGATGTCGTCTTACAAGCTT-CAAATATGTTAGCA 59
** * * ** * * **
consensus_7952#0 CCCGATTAACACACTAATAACATTGTACTATAACCACACACCAACTAN---AAAACCNCC 471
consensus_7952#6 ACCGAT-GGTGTATTAACCA-GTGGGGAATTNTTTGTTCTCTGACTAG---CAACAAAGC 113
consensus_7952#1 -TAAAC--GCATTTTCATCGAAGTACTGGCAATCTGATTTCTGATGTC----TTACGAGC 459
consensus_7952#2 -TCAAT--ATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGT-CTCATGAGC 324
consensus_7952#3 -TCAAT--ATGTTTTCATCGAAGGAATAGCAATCTGATTTCTGATGGC----TTACGAGC 185
consensus_7952#4 -TTCAT--ATGTTTTCATCAAAG-ATCTTCTGTGGGT-CATTGGCACCGGGAAGACCATC 253
consensus_7952#5 -TTCAT--ATGTTTTCATCAAAG-GTAAATCACGAATTCAATGATATTGCACTAACAAGA 115
* * *
consensus_7952#0 AACGGAATCACTCNTAAAACACTTCAACCCCAAAGACCCCCGGCCNGNTATC-NCCACAC 530
consensus_7952#6 GACA-AATCATTTGATATACAATT--GTGTCATTGCCACNAGGCAAAACCAC-ATAATNT 169
consensus_7952#1 TTCAAGATATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGT 519
consensus_7952#2 TTCATGAAATGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGT 384
consensus_7952#3 TTCAAGAAATGCATAAACGCATTTTCATCGAAGGATTGGCAATCTGATTTCTGATGTCGT 245
consensus_7952#4 CTGTGGATCGTCATAGTCACAGTTG--TTACAGCATTGTGGACCGGTTGTC----AGCGA 307
consensus_7952#5 TTCGTTGTTGCTATACGATGAGTTAC-TTATTGTACTATTGCTTGAATTTCTTCAACCGA 174
**
consensus_7952#0 NG-ATCAACTT--TCNTNACATGTCATCANCTCACTCCACGTATACACTNNTACTAAAAT 587
consensus_7952#6 NGCATTTGTCA--TTTNNATAGTTTATCACATTTTACCAGGCATTGGCCAATCTAGATTT 227
consensus_7952#1 CTCATGAGCTT-CATGAAATGCATCAATATGTTTTCATCGAAG------CAATCTGATTT 572
consensus_7952#2 CTCATGAGCTT-CATGAAATGCATCAATATGTTTTCATCGAAGAACTGGCAATCTGATTT 443
consensus_7952#3 CTCATGAGCTT-CATGAAATGCATCAATATGTTTTCATCGAAGAACTGGCAATCTGATTT 304
consensus_7952#4 TACACCTGACAATTCTAAAGACATCATCATCGAATCAT-GTCACCGCTTTTCACTAATAA 366
consensus_7952#5 TA-GTTTGTTAACCTGTAAGGAATTTTTGTTCACTGATAGTAACAAACAATAATGCAAAG 233
* * *
consensus_7952#0 TCGCAGCCCACCCAAGCGCCNCATCTACANGNNGGGACGTCCCCACCT----ATGGGANA 643
consensus_7952#6 CTGATGTCTATACGAGCTTCAAGCACACATGCCATNANAACGCCNTTT----TC----CA 279
consensus_7952#1 CTGATGGCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAA-GGATTGGCAAT 631
consensus_7952#2 CTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAA-GGATTGGCAAT 502
consensus_7952#3 CTGATGTCTTACGAGCTTCAAGAAATGCATAAACGCATTTTCATCGAA-GGATTGGCAAT 363
consensus_7952#4 TGTCTTACCAAACAACTTAAACCCAGATCTTAAATACCACCCGC-GTTCAAGTATTTAAT 425
consensus_7952#5 CAAAACAATAATTAATTTTATTTTATGTTTGACGAACTGGTGATTGCATGAAAAAAAAAA 293
consensus_7952#0 CAACACGACGAATCAGCCACACNCATTAGGTTAAACCNCCCAGGGGGCCTCTNACAGGGG 703
consensus_7952#6 TCGCACAGGGATATAGGCAATCTAGATATATCTNGATGTC----ACGTCTCCATGGAGCT 335
consensus_7952#1 CTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAG- 690
consensus_7952#2 CTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGT 562
consensus_7952#3 CTGATTTCTGATGTCGTCTCATGAGCTTCATGAAATGCATCAATATGTTTTCATCGAAGA 423
consensus_7952#4 TTCATTTAGTTTATTTAATTCGACACAGCAATAGGCTCCCTTGAAAGCAACACATGTAC- 484
consensus_7952#5 TCCAAGAGGAAGATTTATTCTTTAACTGCAACAAACCATTTAAAATGTTCACTTTAAAT- 352
*
consensus_7952#0 AGCAAAAAGGCGCANCANAGACTGNNGCCG----GNACAACCCGCANTTACAAGCCCCTG 759
consensus_7952#6 ATCATGCAAATGCATCGCACATCATAGT-------AAATATCCATCCGCACAGGTAACTT 388
consensus_7952#1 ---------------------------------------GATTGGCAATCTGATTTC-TG 710
consensus_7952#2 ATGCAAAGGAA-----AACCCAAATTGATTTTTTAACAGGATTGGCAATTTGATTCC-TG 616
consensus_7952#3 TCTTCTGTGGGTCATTGGCACCGGGAAGACCATCCTGTGGATCGTCATAGTCACAGT-TG 482
consensus_7952#4 ----------------------------------------ACAGGCTTAGGAAGCAATTG 504
consensus_7952#5 ----------------------------------------ATGGTGTGTGTCTTTTCGTA 372
*
consensus_7952#0 GNGGGTCCCCCANCGTACGCACAANACGAACACTTAAAGNCCAACAAA--ANATTGGAAC 817
consensus_7952#6 GGGCCACATCNTAGATATATCTTGCATTGTCTATAACGAGCTATCGAAG-ATATTGCNAT 447
consensus_7952#1 ATGTCGTCTCATGAGCTTCATGAAAT--GC-ATCAATATGTTTTCATCGAAGGATT---- 763
consensus_7952#2 ATGTCGTCTTACAAGCTTCAATATGTTAGC-ATTCATATGTTTTCATCAAAGATCTTCTG 675
consensus_7952#3 TTACAGCATTGTGGACCGGTTGTCAGCGAT-ACACCTGACAATTCTAAAGACATCATCAT 541
consensus_7952#4 CGG-AACATACCGTGTT-CATGAAGATAGCAAATGACGGTAGAATAAGGTAGAACGGTTC 562
consensus_7952#5 CAGTAATATTATGTATTTCCTTTTTTCTTTTGGTCATGATATCCCTACTTAGATCTTCTG 432
*
consensus_7952#0 CCAGCGGCATAACNGAAGACACATAAACAAGCGGCGCAAGACAACNAACCCGGCGGAATC 877
consensus_7952#6 TAAACGCCATTTCTCNAT-CGCA-GGATA------------------------------- 474
consensus_7952#1 --GGCAAT----CTGATTTCTGATG-T--CGTCTCATGAGCT-TCATGAAATGCATCAAT 813
consensus_7952#2 TGGGTCAT----TGGCACCGGGAAGAC--CATCCTGTGGATCGTCATAGTCACAGTTGTT 729
consensus_7952#3 CGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATCTT 601
consensus_7952#4 TAAACAGG----CCAAACGTGTGCGAC--AGTCTTTGATGGCGATTAGATCGCGGATACA 616
consensus_7952#5 TGGGTCAT----TGGCACCGGGAAGAC--CATCCTGTGGATCGTCATAGTCACAGTTGTT 486
consensus_7952#0 A---ACCACTANCAACACCNCACGGGCCCCCAAACACACCCGAATNGACTTGCCCNGAAC 934
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 A--TGTTTTCATCGAAGG-ATTGGCA-------ATCTGAT--TTCTGAT--GTCGTCTCA 859
consensus_7952#2 A--CAGCATTGTGGACCG-GTTGTCAGCGATACACCTGACAATTCTAAA--GACATCATC 784
consensus_7952#3 AAATACCACCCGCGTTCA-AGTATTTA-ATTTCATTTAGTTTATTTAATTCGACACAGCA 659
consensus_7952#4 A---AGTCTTCTAGTTGGAGCATATAAAATTGATTTTGGATAGAAGAAA--GGGAAAACC 671
consensus_7952#5 A--CAGCATTGTGGACCGGGTTGTCAGCGATACACCTGACAATTCTAAA--GACATCATC 542
consensus_7952#0 NCACAGCCCCCCACCCGTGACACACTAGAACAACCGNNAANAACAAAACGAACCTTACCC 994
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 TGAGCTTCATGAAA------TGCATCAATATGTTTTCATCGAAGGATTGGCAATCTGATT 913
consensus_7952#2 ATCGAATCATGTCACCGCTTTTCACTAATAATGTCTTACCAAACAACTTAAACCCAGATC 844
consensus_7952#3 ATAGGCTCCCTTGAAAGCAACACATGTACACAGGCTTAGGAAGCAATTGCGGAACATACC 719
consensus_7952#4 ACTACGTTAGTTTAGGA------------------------------------------- 688
consensus_7952#5 ATCGAATCATGTCACCGCTTTTCACTAATAATGTCT------------------------ 578
consensus_7952#0 GGCCCNGAGGNANCCCCACAAANGCGACCNGTCNCTACNCNACNCACATATGAGAACGCC 1054
consensus_7952#6 ------------------------------------------------------------
consensus_7952#1 T----------------------------------------------------------- 914
consensus_7952#2 TTAAAT------------------------------------------------------ 850
consensus_7952#3 GTGTTCATGAAGATAGCAAATGACGG---------------------------------- 745
consensus_7952#4 ------------------------------------------------------------
consensus_7952#5 ------------------------------------------------------------
consensus_7952#0 AC 1056
consensus_7952#6 --
consensus_7952#1 --
consensus_7952#2 --
consensus_7952#3 --
consensus_7952#4 --
consensus_7952#5 --
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||