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Anopheles gambiae
cluster # 7956 cluster # 7956       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7956#0 length = 1273 sequences # 1  
consensus_7956#1 length = 863 sequences # 3  
consensus_7956#2 length = 601 sequences # 2  
consensus_7956#3 length = 561 sequences # 1  
consensus_7956#4 length = 361 sequences # 1  

consensusID : consensus_7956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1273
fasta sequence
                              [AGCAGAATGCCCAGGCTTTATTAAATAGTACTTCACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCTGTACTACAAAGATACCGACAGTTTCGGCGCCCTGTATGCTCAGCAAGCTCGGCTGGACTGGAGTGGCAAGGGGCTGGGACTGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTGGGCGGTAGGGACGACATGTAGGACGCAGCATGAGGCAGGCTTTACCTGAACTGCTCCGGCGCTTGAACCGGTGATGAGAGTGAACCGGCGAAGGTGCCCGGTGACGCCGTGATCGAACCCAAAAGCCAGGTGCAATCGCTCGANGGCAGCGGTCGGAAGCAAATCGCNGGCTGCCCGTGTTGCACTACACCCCGGTTCACCCCGGGGGCACAACGCATTCTGAGCACAGTGAACGAGAAAGATNTTGGCCCAACATCTCNTCCTGGGCACACAGCGTTCGCCTGACCCGANCAGCACGCAGNGCCCGNANGGGCACACNGACGCGAAGCGGATCGGGCCCCTTGCTCATCTANCNGCTATCCGGTCAACGGATTTAAGGGCCAAGCCATTGTTCGGAATGCCAGGACTTAATCTTCCAAGGGCACGAAACACACNTTGCACGAAACCAAGGTACGAAGCCNTTNGGCCCCGACCGGAGCTCCAAAACTTGGGGCACGTTAACGGCAACCCCTGGCGCTGCGCACGGGGCCAAAACCCGGGGCTTTCACAANNGACGGNACACCCGGGACCCAACGGCGCCGGGGCGGNATGAANGAGGCAACNTCGGCAACACACACTTTGGGGACTTCCAAAGCAGCCCGGTAANAAGNNAAGCANACNNGGCCAAAGTTGNACATNTGGGCGTTGGCNAACTGGGACAANACCAAGNNGCAAAACTTTATCAAAAAAAAACAACAAATANANAAAAGNAANAAGCTAACCAACAATCAAACACGCACNAGAACAAGAATNCCNAAAGAATGACAACCAAACAAANGACNCAACAAAACNACNAACCCACCCACNAACGNANGGCGNACCACAACTTTGGGTCATCTANGCNGCCAGCTGCGACGCCNCCCCTGGNTCCTAACAGCGCGTGCCGCCATNACAANAATTACCCCCCCCACTANCTTTTCTAATGAAGAGATNTTGGNATAANTNG]

[+] EMBL AL693873             [AGCAGAATGCCCAGGCTTTATTAAATAGTACTTCACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCTGTACTACAAAGATACCGACAGTTTCGGCGCCCTGTATGCTCAGCAAGCTCGGCTGGACTGGAGTGGCAAGGGGCTGGGACTGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTGGGCGGTAGGGACGACATGTAGGACGCAGCATGAGGCAGGCTTTACCTGAACTGCTCCGGCGCTTGAACCGGTGATGAGAGTGAACCGGCGAAGGTGCCCGGTGACGCCGTGATCGAACCCAAAAGCCAGGTGCAATCGCTCGANGGCAGCGGTCGGAAGCAAATCGCNGGCTGCCCGTGTTGCACTACACCCCGGTTCACCCCGGGGGCACAACGCATTCTGAGCACAGTGAACGAGAAAGATNTTGGCCCAACATCTCNTCCTGGGCACACAGCGTTCGCCTGACCCGANCAGCACGCAGNGCCCGNANGGGCACACNGACGCGAAGCGGATCGGGCCCCTTGCTCATCTANCNGCTATCCGGTCAACGGATTTAAGGGCCAAGCCATTGTTCGGAATGCCAGGACTTAATCTTCCAAGGGCACGAAACACACNTTGCACGAAACCAAGGTACGAAGCCNTTNGGCCCCGACCGGAGCTCCAAAACTTGGGGCACGTTAACGGCAACCCCTGGCGCTGCGCACGGGGCCAAAACCCGGGGCTTTCACAANNGACGGNACACCCGGGACCCAACGGCGCCGGGGCGGNATGAANGAGGCAACNTCGGCAACACACACTTTGGGGACTTCCAAAGCAGCCCGGTAANAAGNNAAGCANACNNGGCCAAAGTTGNACATNTGGGCGTTGGCNAACTGGGACAANACCAAGNNGCAAAACTTTATCAAAAAAAAACAACAAATANANAAAAGNAANAAGCTAACCAACAATCAAACACGCACNAGAACAAGAATNCCNAAAGAATGACAACCAAACAAANGACNCAACAAAACNACNAACCCACCCACNAACGNANGGCGNACCACAACTTTGGGTCATCTANGCNGCCAGCTGCGACGCCNCCCCTGGNTCCTAACAGCGCGTGCCGCCATNACAANAATTACCCCCCCCACTANCTTTTCTAATGAAGAGATNTTGGNATAANTNG]


>consensus_7956#0 AGCAGAATGCCCAGGCTTTATTAAATAGTACTTCACGATGGGTGATGGTGATTTCAGCTC GGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGA CCCGGTGAAGAAACCTGTACTACAAAGATACCGACAGTTTCGGCGCCCTGTATGCTCAGC AAGCTCGGCTGGACTGGAGTGGCAAGGGGCTGGGACTGGGATGAGAACGGAATCACCATT CCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTGGGCGGTAGGGAC GACATGTAGGACGCAGCATGAGGCAGGCTTTACCTGAACTGCTCCGGCGCTTGAACCGGT GATGAGAGTGAACCGGCGAAGGTGCCCGGTGACGCCGTGATCGAACCCAAAAGCCAGGTG CAATCGCTCGANGGCAGCGGTCGGAAGCAAATCGCNGGCTGCCCGTGTTGCACTACACCC CGGTTCACCCCGGGGGCACAACGCATTCTGAGCACAGTGAACGAGAAAGATNTTGGCCCA ACATCTCNTCCTGGGCACACAGCGTTCGCCTGACCCGANCAGCACGCAGNGCCCGNANGG GCACACNGACGCGAAGCGGATCGGGCCCCTTGCTCATCTANCNGCTATCCGGTCAACGGA TTTAAGGGCCAAGCCATTGTTCGGAATGCCAGGACTTAATCTTCCAAGGGCACGAAACAC ACNTTGCACGAAACCAAGGTACGAAGCCNTTNGGCCCCGACCGGAGCTCCAAAACTTGGG GCACGTTAACGGCAACCCCTGGCGCTGCGCACGGGGCCAAAACCCGGGGCTTTCACAANN GACGGNACACCCGGGACCCAACGGCGCCGGGGCGGNATGAANGAGGCAACNTCGGCAACA CACACTTTGGGGACTTCCAAAGCAGCCCGGTAANAAGNNAAGCANACNNGGCCAAAGTTG NACATNTGGGCGTTGGCNAACTGGGACAANACCAAGNNGCAAAACTTTATCAAAAAAAAA CAACAAATANANAAAAGNAANAAGCTAACCAACAATCAAACACGCACNAGAACAAGAATN CCNAAAGAATGACAACCAAACAAANGACNCAACAAAACNACNAACCCACCCACNAACGNA NGGCGNACCACAACTTTGGGTCATCTANGCNGCCAGCTGCGACGCCNCCCCTGGNTCCTA ACAGCGCGTGCCGCCATNACAANAATTACCCCCCCCACTANCTTTTCTAATGAAGAGATN TTGGNATAANTNG



consensusID : consensus_7956#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 863
fasta sequence
                              [AGGCCAAGAATTCCCCCCGCGAGGTTTTACGTTGTGCTGCACAGTGAACACTTTAATCTCAATCCTTTTTTCCCGTAAAATAGTACATTAACTTATTAAAATAGTACCTTCACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGACGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTGGGCGGTAGGGACGACATGTGGACGCAGCATGAGGCAGGCTTTA-CCGAACTGCTCCGGCGCTTGAACGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTTGGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCCGGCTTCGAGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGTTTGTCAACGATTAAGGCAAGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCNGGGCAATGGAGTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAATGGTCACCGAAGACACGCATGATG]

[+] EMBL AL696073             [AGGCCAAGAATTCCCCCCGCGAGGTTTTACGTTGTGCTGCACAGTGAACACTTTAATCTCAATCCTTTTTTCCCGTAAAATAGTACATTAACTTATTAAAATAGTACCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX621313             [                          gTACGTTGTGCTGCACAGTGAA A  TTAATCTC AT CTTTTTTCCCGTAAAATAGTACATTAACTTATTAAAATAGTACCTTCACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGACGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTGGGCGGTAGGGACGACATGTGGACGCAGCATGAGGCAGGCTTTA CCGAACTGCTCCGGCGCTTGAACGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTTGGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCCGGCTTCGAGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGTTTGTCAACGATTAAGGCAAGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCNGGGCAATGGAGTAG                                                                           ]
[+] EMBL CNS09QD3             [                                                            tcatCTTTTTTCCCGTAAAATAGTACATTAACTTATTAAAATAGTACCTTCACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGACGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTGGGCGGTAGGGACGACATGTGGACGCAGCATGAGGCAGGCTTTACCCGAACTGCTCCGGCGCTTGAACGGTGATGAGAGTGAACCGGCCGAA GTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTTGGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCCGGCTTCGAGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGTTTGTCAACGATTAAGGCAAGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGC GGGCAATGGAGTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAATGGTCACCGAAGACACGCATGATG]


>consensus_7956#1 AGGCCAAGAATTCCCCCCGCGAGGTTTTACGTTGTGCTGCACAGTGAACACTTTAATCTC AATCCTTTTTTCCCGTAAAATAGTACATTAACTTATTAAAATAGTACCTTCACGATGGGT GATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGC ACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGC GCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGACGGGATGAGAAC GGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTG GGCGGTAGGGACGACATGTGGACGCAGCATGAGGCAGGCTTTACCGAACTGCTCCGGCGC TTGAACGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAA AGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACC CGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTT GGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCCGGCTTCG AGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGTTTGTCAACGATTAAGGCA AGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCNGGGCAA TGGAGTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAAT GGTCACCGAAGACACGCATGATG



consensusID : consensus_7956#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 601
fasta sequence
                              [CCGGAAGGCTGAGCCGTACGTTGTGCTGCACCGTAAAATTAATCTCATCTTTTTCCCGTAAAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGGCGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGGCGGTAGGGACGACATGTGGACGCAGCATGAGGCAGGCTTTACCGAACTGCTCCGGCGCTTGAATGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTTGGCAAACGTTCGCTGAC]

[+] EMBL BM656200             [CCGGAAGGCTGAGCCGTACGTTGTGCTGCACCGTAAAATTAATCTCATCTTTTTCCCGTAAAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGGCGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGGCGGTAGGGACGACATGTGGACGCAGCATGAGGCAGGCTTTACCGAACTGCTCCGGCGCTTGAATGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTTGGCAAACGTTCGCTGAC]
[+] EMBL BX620201             [                                                                                                                                 TTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCNNCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACNGAGGGCAAGGGGCTGGGACGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGG                                                                                                                                                                                                                                                               ]


>consensus_7956#2 CCGGAAGGCTGAGCCGTACGTTGTGCTGCACCGTAAAATTAATCTCATCTTTTTCCCGTA AAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGGTGATGGTGATTTCAGCT CGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACG ACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCA AGCTCGGCTGGACGGAGGGCAAGGGGCTGGGGCGGGATGAGAACGGAATCACCATTCCCA TCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGGCGGTAGGGACGACA TGTGGACGCAGCATGAGGCAGGCTTTACCGAACTGCTCCGGCGCTTGAATGGTGATGAGA GTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGC TCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCA AAGATTTGAGCAGAGTGAACGAGAAAGATTTGGCCAACATTTTTGGCAAACGTTCGCTGA C



consensusID : consensus_7956#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 561
fasta sequence
                              [CCGCCCACGCGTCCGTGCACCGTAAAATTAATCTCATCTTTTTCCCGTAAAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCTAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGGCGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGGCGGGAGGGACGACATGTGGACGCAGCATGAGGCAGGGTTTACCGAACTGCTCCGGCGCTTGAATGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTG]

[+] EMBL BM586843             [CCGCCCACGCGTCCGTGCACCGTAAAATTAATCTCATCTTTTTCCCGTAAAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTTTCTAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAGAAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGGACGGAGGGCAAGGGGCTGGGGCGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGGGTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGGCGGGAGGGACGACATGTGGACGCAGCATGAGGCAGGGTTTACCGAACTGCTCCGGCGCTTGAATGGTGATGAGAGTGAACCGGCCGAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGGTCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGCAGAGTGAACGAGAAAGATTTG]


>consensus_7956#3 CCGCCCACGCGTCCGTGCACCGTAAAATTAATCTCATCTTTTTCCCGTAAAATAGTACAT TAACTTCGTAAAATAGTAACGGCAACGATGGGTGATGGTGATTTCAGCTCGGTGACGCTT TCTAGCGCAAAAGCTCGCCAGAAGAAACTTTGCACGATGCGGCTAAACGACCCGGTGAAG AAACCGTACTACAAAGATACCGACAGTTTCGGCGCCCGTATGCTCAGCAAGCTCGGCTGG ACGGAGGGCAAGGGGCTGGGGCGGGATGAGAACGGAATCACCATTCCCATCTCGAACCGG GTGAAGCTGGACACGGAAGGGGTTGGTTTCGTCGGCGGGAGGGACGACATGTGGACGCAG CATGAGGCAGGGTTTACCGAACTGCTCCGGCGCTTGAATGGTGATGAGAGTGAACCGGCC GAAGGTGCCGGTGACGCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGGAGCGG TCGAAGCAATCGCGCGCCCGTGTGCACTACACCCGGTTCACCCGGGGCAAAGATTTGAGC AGAGTGAACGAGAAAGATTTG



consensusID : consensus_7956#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 361
fasta sequence
                              [CCGCGGACGCGTGGGTTTTGGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCTGGCTTCGAGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGGTTGTCAACGATTAAGGCGAGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCGGGCAATGGAGTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAATGGTCACCGAAGAGACGCATGATGGTGAGAAGATTAAAAAGAAGAAGAGTAAGAAAAAAGCGAAGGAAAACGAACAAACGGTGGAACCGATGGAGGAAAGTGTA]

[+] EMBL BM632616             [CCGCGGACGCGTGGGTTTTGGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCTGGCTTCGAGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGGTTGTCAACGATTAAGGCGAGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCGGGCAATGGAGTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAATGGTCACCGAAGAGACGCATGATGGTGAGAAGATTAAAAAGAAGAAGAGTAAGAAAAAAGCGAAGGAAAACGAACAAACGGTGGAACCGATGGAGGAAAGTGTA]


>consensus_7956#4 CCGCGGACGCGTGGGTTTTGGCAAACGTTCGCTGACCGAGAGCAGCAGGCCGAGGGAAGA GGAGGAGCAGCTGGCTTCGAGCGGGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGG GTTGTCAACGATTAAGGCGAGCATGTCGATGCAGGATTATTTCAAGGAGAAAATGAAACA GAGAGCTGCCGCGGGCAATGGAGTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACA GGGCGGTGAGGAGGAAATGGTCACCGAAGAGACGCATGATGGTGAGAAGATTAAAAAGAA GAAGAGTAAGAAAAAAGCGAAGGAAAACGAACAAACGGTGGAACCGATGGAGGAAAGTGT A



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7956#0      ------------------------------------------------------------
consensus_7956#2      -----------CCGGAAGGCTGAGCCGTACGTTGTGCTGCACCGTAAAA---TTAATCTC 46
consensus_7956#3      ----------------------CCGCCCACGCGTCCGTGCACCGTAAAA---TTAATCTC 35
consensus_7956#1      AGGCCAAGAATTCCCCCCGCGAGGTTTTACGTTGTGCTGCACAGTGAACACTTTAATCTC 60
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      ----------------AGCAGAATGCCCAGGCTTTATTAAATAGTACT--TCACGATGGG 42
consensus_7956#2      A---TCTTTTTCCCGTAAAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGG 103
consensus_7956#3      A---TCTTTTTCCCGTAAAATAGTACATTAACTTCGTAAAATAGTAACGGCAACGATGGG 92
consensus_7956#1      AATCCTTTTTTCCCGTAAAATAGTACATTAACTTATTAAAATAGTACCT-TCACGATGGG 119
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      TGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTG 102
consensus_7956#2      TGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTG 163
consensus_7956#3      TGATGGTGATTTCAGCTCGGTGACGCTTTCTAGCGCAAAAGCTCGCCAGAAGAAACTTTG 152
consensus_7956#1      TGATGGTGATTTCAGCTCGGTGACGCTTTCGAGCGCAAAAGCTCGCCAGAAGAAACTTTG 179
consensus_7956#4      --------------------------CCGCGGACGCGTGGGTT---TTGGCAAACGTTCG 31
                                                   *   ***    * *     *   **  ** *

consensus_7956#0      CACGATGCGGCTAAACGACCCGGTGAAGAAACCTGTACTACAAAGATACCGACAGTTTCG 162
consensus_7956#2      CACGATGCGGCTAAACGACCCGGTGAAGAAACC-GTACTACAAAGATACCGACAGTTTCG 222
consensus_7956#3      CACGATGCGGCTAAACGACCCGGTGAAGAAACC-GTACTACAAAGATACCGACAGTTTCG 211
consensus_7956#1      CACGATGCGGCTAAACGACCCGGTGAAGAAACC-GTACTACAAAGATACCGACAGTTTCG 238
consensus_7956#4      CTGACCGAGAGCAGCAGGCCGAGGGAAGAGGAG-GAGCAGC--TGGCTTCGA-----GCG 83
                      *     * *   *   * **  * *****     *  *  *   *    ***      **

consensus_7956#0      GCGCCCTGTATGCTCAGCAAGCTCGGCTGGACT-GGAGTGGCAAGGGGCTGGGACTGGGA 221
consensus_7956#2      GCGCCC-GTATGCTCAGCAAGCTCGGCTGGAC--GGAG-GGCAAGGGGCTGGGGC-GGGA 277
consensus_7956#3      GCGCCC-GTATGCTCAGCAAGCTCGGCTGGAC--GGAG-GGCAAGGGGCTGGGGC-GGGA 266
consensus_7956#1      GCGCCC-GTATGCTCAGCAAGCTCGGCTGGAC--GGAG-GGCAAGGGGCTGGGAC-GGGA 293
consensus_7956#4      GGGGTGAGAGTGCCGAGGAGGATCGGCCTGTTTTAGGGTTGTCAACGATTAAGGCGAGCA 143
                      * *    *  ***  ** * * *****  *     * *  *  *  *  *  * *  * *

consensus_7956#0      TGAGAACGGAATCACCATTCCCATCTCGAACCGGGT--GAAGCTGGACACGG--AAGGGG 277
consensus_7956#2      TGAGAACGGAATCACCATTCCCATCTCGAACCGGGT--GAAGCTGGACACGG--AAGGGG 333
consensus_7956#3      TGAGAACGGAATCACCATTCCCATCTCGAACCGGGT--GAAGCTGGACACGG--AAGGGG 322
consensus_7956#1      TGAGAACGGAATCACCATTCCCATCTCGAACCGGGT--GAAGCTGGACACGG--AAGGGG 349
consensus_7956#4      TGTCGATGCAGG-ATTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCGGGCAATGGA 202
                      **   * * *   *  *** * *     **  *     **     * * ***  ** ** 

consensus_7956#0      TTGGTTTCGTGGGCGGTAG-GGACGACATGTA-GGACGCAGCA-TGAGGCAGGCTTTACC 334
consensus_7956#2      TTGGTTTCGTCGGCGGTAG-GGACGACATGT--GGACGCAGCA-TGAGGCAGGCTTTACC 389
consensus_7956#3      TTGGTTTCGTCGGCGGGAG-GGACGACATGT--GGACGCAGCA-TGAGGCAGGGTTTACC 378
consensus_7956#1      TTGGTTTCGTGGGCGGTAG-GGACGACATGT--GGACGCAGCA-TGAGGCAGGCTTTACC 405
consensus_7956#4      GTAGCACCGGTGGAGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAATGGTC 262
                       * *   **  ** ** *  **   * * *   ****   **  *****  *   *   *

consensus_7956#0      TGAACTGCTCCGGCGCTTGAACCGGTGATGAGAGTGAACCGGC-GAAGGTGCCCGGTGAC 393
consensus_7956#2      -GAACTGCTCCGGCGCTTGAAT-GGTGATGAGAGTGAACCGGCCGAAGGTGCC-GGTGAC 446
consensus_7956#3      -GAACTGCTCCGGCGCTTGAAT-GGTGATGAGAGTGAACCGGCCGAAGGTGCC-GGTGAC 435
consensus_7956#1      -GAACTGCTCCGGCGCTTGAAC-GGTGATGAGAGTGAACCGGCCGAAGGTGCC-GGTGAC 462
consensus_7956#4      ---ACCGAAGAGACGCATGAT--GGTGAGAAGATTAAAAAGAAGAAGAGTAAG----AAA 313
                         ** *    * *** ***   *****  *** * **  *    *  **        * 

consensus_7956#0      GCCGTGATCGAACCCAAAAGCCAGGTGCAATCGCTCGANGGCAGCGGTCGGAAGCAAATC 453
consensus_7956#2      GCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGG--AGCGGTCG-AAGCAA-TC 502
consensus_7956#3      GCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGG--AGCGGTCG-AAGCAA-TC 491
consensus_7956#1      GCCGTGATCGACCCCAAAAGCCAGGTGCAATCGCTCGAGG--AGCGGTCG-AAGCAA-TC 518
consensus_7956#4      AAAGCGAAGGAAAACGAACAAACGGTGGAACCGATGGAGGAAAGTGTA------------ 361
                         * **  **   * **     **** ** ** * ** *  ** *              

consensus_7956#0      GCNGGCTGCCCGTGTTGCACTACACCCCGGTTCACCCCGGGGGCACAACGCATTCTGAGC 513
consensus_7956#2      GCG---CGCCCGTGT-GCACTACACCC-GGTTCACCC--GGGGCAAAGA----TTTGAGC 551
consensus_7956#3      GCG---CGCCCGTGT-GCACTACACCC-GGTTCACCC--GGGGCAAAGA----TTTGAGC 540
consensus_7956#1      GCG---CGCCCGTGT-GCACTACACCC-GGTTCACCC--GGGGCAAAGA----TTTGAGC 567
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      ACAGTGAACGAGAAAGATNTTGGCCCAACATCTCNTCCTGGGCACACAGCGTTCGCCTGA 573
consensus_7956#2      AGAGTGAACGAGAAAGATTT--GGCCAACATTTTT-----GGCA---AACGTTCGC-TGA 600
consensus_7956#3      AGAGTGAACGAGAAAGATTTG--------------------------------------- 561
consensus_7956#1      AGAGTGAACGAGAAAGATTT--GGCCAACATTTTT-----GGCA---AACGTTCGCTGAC 617
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      CCCGANCAGCACGCAGNGCCCGNANGGGCACACNGACGCGAAGCGGATCGGGCCCCTTGC 633
consensus_7956#2      C----------------------------------------------------------- 601
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      CGAGAGCAGCAGGCCGAGGGAAGAGGAGGAGCAGCCGGCTTCGAGCGGGGGTGAGAGTGC 677
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      TCATCTANCNGCTATCCGGTCAACGGATTTAAGGGCCAAGCCATTGTTCGGAATGCCAGG 693
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      CGAGGAGGATCGGCCTGTTTTAGGTTTGTCAACGATTAAGGCAAGCATGTCGATGCAGGA 737
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      ACTTAATCTTCCAAGGGCACGAAACACACNTTGCACGAAACCAAGGTACGAAGCCNTTNG 753
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      TTATTTCAAGGAGAAAATGAAACAGAGAGCTGCCGCNGGGCAATGGAGTAGCACCGGTGG 797
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      --GCCCCGACCGGAGCTCCAAAACTTGG-GGCACGTTAACGGCAACCCCTGGCGCTGCGC 810
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      AGGCAACGGTTAAGACGAACGGACAGGGCGGTGAGGAGGAAATGGTCACCGAAGACACGC 857
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      ACGGGGCCAAAACCCGGGGCTTTCACAANNGACGGNACACCCGGGACCCAACGGCGCCGG 870
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ATGATG------------------------------------------------------ 863
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      GGCGGNATGAANGAGGCAACNTCGGCAACACACACTTTGGGGACTTCCAAAGCAGCCCGG 930
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ------------------------------------------------------------
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      TAANAAGNNAAGCANACNNGGCCAAAGTTGNACATNTGGGCGTTGGCNAACTGGGACAAN 990
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ------------------------------------------------------------
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      ACCAAGNNGCAAAACTTTATCAAAAAAAAACAACAAATANANAAAAGNAANAAGCTAACC 1050
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ------------------------------------------------------------
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      AACAATCAAACACGCACNAGAACAAGAATNCCNAAAGAATGACAACCAAACAAANGACNC 1110
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ------------------------------------------------------------
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      AACAAAACNACNAACCCACCCACNAACGNANGGCGNACCACAACTTTGGGTCATCTANGC 1170
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ------------------------------------------------------------
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      NGCCAGCTGCGACGCCNCCCCTGGNTCCTAACAGCGCGTGCCGCCATNACAANAATTACC 1230
consensus_7956#2      ------------------------------------------------------------
consensus_7956#3      ------------------------------------------------------------
consensus_7956#1      ------------------------------------------------------------
consensus_7956#4      ------------------------------------------------------------
                                                                                  

consensus_7956#0      CCCCCCACTANCTTTTCTAATGAAGAGATNTTGGNATAANTNG 1273
consensus_7956#2      -------------------------------------------
consensus_7956#3      -------------------------------------------
consensus_7956#1      -------------------------------------------
consensus_7956#4      -------------------------------------------
                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)