These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence [CCGACTGCACCAGTGAATGGTGGCTTCGCAGTGAACCCCTGAGTGTTGGGAATGGCGTATTTTTAGCGTGCAAACCCCGTTACGCCTCTTCCCCGTGTTATATAATTAGCAGAGCGTACTTCGCGTCCTGCTGCAGTGGTGCAAAGTGCAGCATGCATCATGCATCCGTAACTGAGGCGACCTTTACGGAGAGGTTGTTGTTTGTGTGTGTGTGCGGCAGCAGTTGCATCTCGCCACGGTGCATACCATTTCGGCACGCTTCGTAATGGTTCGCTAAACTGCGTCGCTAAATCTTGTTTTGTCAGCTTGCCCGCACGCTATACCAACTGGTGGGCGCGGAATGGCGTAGTTGGTGTGATGGTCCTTCACCGTTTTCGTTTGTTTTTTTTTTTGTTTTGCTTTTCTGGTTGCTCGTTTACAAGATGTGATGGGTGTGAAGAATGGCTTGCTGAGAATGTCTGAGGAAGAGAGAAGGAGCCGGTAGGAGAATATTTCATGCACTGCCAAAACCGCTAGGAAAAACAATAACAAACCAGAGCAATCTCCCGAACAACTGGAACAAACACAAATAAACAAACAAACAAACGTTACAATAAGCTTTAAAAACTAATTCTGAAAAGGAAATGACTTAATTATACTATAGA] [+] EMBL BM617625 [CCGACTGCACCAGTGAATGGTGGCTTCGCAGTGAACCCCTGAGTGTTGGGAATGGCGTATTTTTAGCGTGCAAACCCCGTTACGCCTCTTCCCCGTGTTATATAATTAGCAGAGCGTACTTCGCGTCCTGCTGCAGTGGTGCAAAGTGCAGCATGCATCATGCATCCGTAACTGAGGCGACCTTTACGGAGAGGTTGTTGTTTGTGTGTGTGTGCGGCAGCAGTTGCATCTCGCCACGGTGCATACCATTTCGGCACGCTTCGTAATGGTTCGCTAAACTGCGTCGCTAAATCTTGTTTTGTCAGCTTGCCCGCACGCTATACCAACTGGTGGGCGCGGAATGGCGTAGTTGGTGTGATGGTCCTTCACCGTTTTCGTTTGTTTTTTTTTTTGTTTTGCTTTTCTGGTTGCTCGTTTACAAGATGTGATGGGTGTGAAGAATGGCTTGCTGAGAATGTCTGAGGAAGAGAGAAGGAGCCGGTAGGAGAATATTTCATGCACTGCCAAAACCGCTAGGAAAAACAATAACAAACCAGAGCAATCTCCCGAACAACTGGAACAAACACAAATAAACAAACAAACAAACGTTACAATAAGCTTTAAAAACTAATTCTGAAAAGGAAATGACTTAATTATACTATAGA] consensusID : consensus_796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGTATTTTTAGCGTGCAAACCCCGTTACGCCTCTTCCCCGTGTTATATAATTAGCAGAGCGTACTTCGCGTCCTGCTGCAGTGGTGCAAAGTGCAGCATGCATCATGCATCCGTAACTGAGGCGACCTTTACGGGGAGGTTGTTGTTTGTGTGTGTGTATGTGCGGCAGCAGTTGCATCTCGCCACGGTGCATACCATTTCGGCACGCTTCGTAATGGTTCGCTAAACTGCGTCGCTAAATCTTGTTTTGTCAGCTTGCCCGCACTCTATACCAACTGGTGGGCGCGGAATGGCGTAGTTGGTGTGATGGTCCTTCACCGTTTTCGGTTGTTTTTTTTTTGTTTTTGCTTTTCTGGTTGCTCGTTTACAAGATGTGATGGGTGTGAAGAATGGCTTGCTGAGAATGTCTGAGGAAAAGAGAAGAAGCCGGTAGGAGAATATTTCATGCACTGCCAAAACCGCTAGGAAAAACAATAACAAACCAGAGCAATCTCCCGAACAACTGGAACAAACACAAATAAACAAACAAACAAACGTTACAATAAGCTTTAAAAACTAATTCTGAAAAGGAAATGACTTAATTATACTATAGAAG] [+] EMBL BM647530 [CCGCCCACGCGTCCGCCCACGCGTCCGCGTATTTTTAGCGTGCAAACCCCGTTACGCCTCTTCCCCGTGTTATATAATTAGCAGAGCGTACTTCGCGTCCTGCTGCAGTGGTGCAAAGTGCAGCATGCATCATGCATCCGTAACTGAGGCGACCTTTACGGGGAGGTTGTTGTTTGTGTGTGTGTATGTGCGGCAGCAGTTGCATCTCGCCACGGTGCATACCATTTCGGCACGCTTCGTAATGGTTCGCTAAACTGCGTCGCTAAATCTTGTTTTGTCAGCTTGCCCGCACTCTATACCAACTGGTGGGCGCGGAATGGCGTAGTTGGTGTGATGGTCCTTCACCGTTTTCGGTTGTTTTTTTTTTGTTTTTGCTTTTCTGGTTGCTCGTTTACAAGATGTGATGGGTGTGAAGAATGGCTTGCTGAGAATGTCTGAGGAAAAGAGAAGAAGCCGGTAGGAGAATATTTCATGCACTGCCAAAACCGCTAGGAAAAACAATAACAAACCAGAGCAATCTCCCGAACAACTGGAACAAACACAAATAAACAAACAAACAAACGTTACAATAAGCTTTAAAAACTAATTCTGAAAAGGAAATGACTTAATTATACTATAGAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_796#0 CCGACTGCACCAGTGAATGGTGGCTTCGCAGTGAACCCCTGAGTGTTGGGAATGGCGTAT 60 consensus_796#1 ----------------------------CCGCCCACGCGTCCGCCCACGCGTCCGCGTAT 32 * * ** * * * * ****** consensus_796#0 TTTTAGCGTGCAAACCCCGTTACGCCTCTTCCCCGTGTTATATAATTAGCAGAGCGTACT 120 consensus_796#1 TTTTAGCGTGCAAACCCCGTTACGCCTCTTCCCCGTGTTATATAATTAGCAGAGCGTACT 92 ************************************************************ consensus_796#0 TCGCGTCCTGCTGCAGTGGTGCAAAGTGCAGCATGCATCATGCATCCGTAACTGAGGCGA 180 consensus_796#1 TCGCGTCCTGCTGCAGTGGTGCAAAGTGCAGCATGCATCATGCATCCGTAACTGAGGCGA 152 ************************************************************ consensus_796#0 CCTTTACGGAGAGGTTGTTGTTTGTGTGTGTGT----GCGGCAGCAGTTGCATCTCGCCA 236 consensus_796#1 CCTTTACGGGGAGGTTGTTGTTTGTGTGTGTGTATGTGCGGCAGCAGTTGCATCTCGCCA 212 ********* *********************** *********************** consensus_796#0 CGGTGCATACCATTTCGGCACGCTTCGTAATGGTTCGCTAAACTGCGTCGCTAAATCTTG 296 consensus_796#1 CGGTGCATACCATTTCGGCACGCTTCGTAATGGTTCGCTAAACTGCGTCGCTAAATCTTG 272 ************************************************************ consensus_796#0 TTTTGTCAGCTTGCCCGCACGCTATACCAACTGGTGGGCGCGGAATGGCGTAGTTGGTGT 356 consensus_796#1 TTTTGTCAGCTTGCCCGCACTCTATACCAACTGGTGGGCGCGGAATGGCGTAGTTGGTGT 332 ******************** *************************************** consensus_796#0 GATGGTCCTTCACCGTTTTCGTTTGTTTTTTTTTTTGTTTTGCTTTTCTGGTTGCTCGTT 416 consensus_796#1 GATGGTCCTTCACCGTTTTCGGTTGTTTTTTTTTTGTTTTTGCTTTTCTGGTTGCTCGTT 392 ********************* ************* *********************** consensus_796#0 TACAAGATGTGATGGGTGTGAAGAATGGCTTGCTGAGAATGTCTGAGGAAGAGAGAAGGA 476 consensus_796#1 TACAAGATGTGATGGGTGTGAAGAATGGCTTGCTGAGAATGTCTGAGGAAAAGAGAAGAA 452 ************************************************** ******* * consensus_796#0 GCCGGTAGGAGAATATTTCATGCACTGCCAAAACCGCTAGGAAAAACAATAACAAACCAG 536 consensus_796#1 GCCGGTAGGAGAATATTTCATGCACTGCCAAAACCGCTAGGAAAAACAATAACAAACCAG 512 ************************************************************ consensus_796#0 AGCAATCTCCCGAACAACTGGAACAAACACAAATAAACAAACAAACAAACGTTACAATAA 596 consensus_796#1 AGCAATCTCCCGAACAACTGGAACAAACACAAATAAACAAACAAACAAACGTTACAATAA 572 ************************************************************ consensus_796#0 GCTTTAAAAACTAATTCTGAAAAGGAAATGACTTAATTATACTATAGA-- 644 consensus_796#1 GCTTTAAAAACTAATTCTGAAAAGGAAATGACTTAATTATACTATAGAAG 622 ************************************************ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||