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Anopheles gambiae
cluster # 7989 cluster # 7989       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7989#0 length = 1482 sequences # 1  
consensus_7989#1 length = 1254 sequences # 4  
consensus_7989#2 length = 844 sequences # 3  

consensusID : consensus_7989#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1482
fasta sequence
                              [GCAGAATTGCCCCCGGATTACTTCAGTGAGCCACAACAAACTCAAGATCATCATACAAACAACAACTGCAAAAAGCTGAACAATATCAAATGTCGTCATATATGGTATGTTTTGTAACACTAACTACTTCTCATATCAAAAGTGTGCAAGCGGTTGAAGTCTTTTAGTTGAATTTGACATTACATACTTCACACAAGCACACGGTGTCTGTGAACAGCGCAAAACACTCTCTATCCCATGCCAAACTCTATCGTATCACCCACAGACACGCAATACTATNCTGACGCTATGTATTCTCTCGGCACATATAAACCAATTTGCTCAATCAACAACCGAAACTATGAACAGTATTTACACTTTCANACGGCATGTAAACACAAGTGTTGGNTTCATTACAACGCNGAAATTCTGGNCATGAGANGNACTGCTNTCGCAGCGGTTTCCGAGGCCGAGCAGCTTGGGAAGAAGCGCAAATCCGCAAGGTAGCAGTAANAAAGATCTTTAACAAAAGACCAGTTGAGTACCATGCGGCACACACATGGCGGGGAACCCGGCCCCAAGGAAGGCCGANTACAGCCCCCGNCAACNGCTTCACGCGGGNACACANGTNAACTTACTCGGCNGGCTCACCGCGCACCACAACCGGAAAAGGAACAGAAGCCCCCAATTGGCCGCACTACCACCACANCGGCTNGGAACNCCACGCTGGAGGNCGGACATTAAAAACANACCTTGATGCAAAGGCAAGCCCANACAGNACANGCTTNACGCCCTTTAACTCCCGAATCTACNTCTCNCCGGAACNTGCCTGGTCACATCACAAAACCCAAGCAGAACCCTTTAAATTATANCCAAACAACACCAACGCGACTTTCAAAAACACACACTTTCAAGAAACAATNNAGTACAAACGCTCNACCNCGCGNGGCAACGGGAGGAATTTCCCGGCCCTTAGGTCTNGGCCCCCAAAGNANGGGAGGCAGCCCCCANTGGGGACCACAGGGGCACAACAANGGGANGCAACACCCCGGCGGGACCCAAACCANCACACGGGGCAAATATGGCAGGAACACGACCGAGCAGACCCCACAACAGGCACACCAAAGGGGCAAAANACCACAAAAGAGGGGAACCACACCCCCACTANGGGGGACCACGCAACCGANAACAAAACACACAAACAAAACACTAGTGCGCCAAACCCGACAAACGCACCGGGACCACCCCNAGACNACCAGANACATNGTATGGGGCCACTGACATAGAAACACCANACCNAAAANCCCCAGCGCANNACCGCCCCAGACAGACAACTAANNACGTACAAACCCTNGNGGGCCGCACTCGTACCAACAGGCACACCAGACCCGGCGNATCACGGGACGGACACACNACCNAACCACGGNAANAANCCGCGCANCANAANACAGAGGACTNAGACNNACAANAACTGGGNNGNCAAACNCAAACCACGCAAAAAAA]

[+] EMBL AL694076             [GCAGAATTGCCCCCGGATTACTTCAGTGAGCCACAACAAACTCAAGATCATCATACAAACAACAACTGCAAAAAGCTGAACAATATCAAATGTCGTCATATATGGTATGTTTTGTAACACTAACTACTTCTCATATCAAAAGTGTGCAAGCGGTTGAAGTCTTTTAGTTGAATTTGACATTACATACTTCACACAAGCACACGGTGTCTGTGAACAGCGCAAAACACTCTCTATCCCATGCCAAACTCTATCGTATCACCCACAGACACGCAATACTATNCTGACGCTATGTATTCTCTCGGCACATATAAACCAATTTGCTCAATCAACAACCGAAACTATGAACAGTATTTACACTTTCANACGGCATGTAAACACAAGTGTTGGNTTCATTACAACGCNGAAATTCTGGNCATGAGANGNACTGCTNTCGCAGCGGTTTCCGAGGCCGAGCAGCTTGGGAAGAAGCGCAAATCCGCAAGGTAGCAGTAANAAAGATCTTTAACAAAAGACCAGTTGAGTACCATGCGGCACACACATGGCGGGGAACCCGGCCCCAAGGAAGGCCGANTACAGCCCCCGNCAACNGCTTCACGCGGGNACACANGTNAACTTACTCGGCNGGCTCACCGCGCACCACAACCGGAAAAGGAACAGAAGCCCCCAATTGGCCGCACTACCACCACANCGGCTNGGAACNCCACGCTGGAGGNCGGACATTAAAAACANACCTTGATGCAAAGGCAAGCCCANACAGNACANGCTTNACGCCCTTTAACTCCCGAATCTACNTCTCNCCGGAACNTGCCTGGTCACATCACAAAACCCAAGCAGAACCCTTTAAATTATANCCAAACAACACCAACGCGACTTTCAAAAACACACACTTTCAAGAAACAATNNAGTACAAACGCTCNACCNCGCGNGGCAACGGGAGGAATTTCCCGGCCCTTAGGTCTNGGCCCCCAAAGNANGGGAGGCAGCCCCCANTGGGGACCACAGGGGCACAACAANGGGANGCAACACCCCGGCGGGACCCAAACCANCACACGGGGCAAATATGGCAGGAACACGACCGAGCAGACCCCACAACAGGCACACCAAAGGGGCAAAANACCACAAAAGAGGGGAACCACACCCCCACTANGGGGGACCACGCAACCGANAACAAAACACACAAACAAAACACTAGTGCGCCAAACCCGACAAACGCACCGGGACCACCCCNAGACNACCAGANACATNGTATGGGGCCACTGACATAGAAACACCANACCNAAAANCCCCAGCGCANNACCGCCCCAGACAGACAACTAANNACGTACAAACCCTNGNGGGCCGCACTCGTACCAACAGGCACACCAGACCCGGCGNATCACGGGACGGACACACNACCNAACCACGGNAANAANCCGCGCANCANAANACAGAGGACTNAGACNNACAANAACTGGGNNGNCAAACNCAAACCACGCAAAAAAA]


>consensus_7989#0 GCAGAATTGCCCCCGGATTACTTCAGTGAGCCACAACAAACTCAAGATCATCATACAAAC AACAACTGCAAAAAGCTGAACAATATCAAATGTCGTCATATATGGTATGTTTTGTAACAC TAACTACTTCTCATATCAAAAGTGTGCAAGCGGTTGAAGTCTTTTAGTTGAATTTGACAT TACATACTTCACACAAGCACACGGTGTCTGTGAACAGCGCAAAACACTCTCTATCCCATG CCAAACTCTATCGTATCACCCACAGACACGCAATACTATNCTGACGCTATGTATTCTCTC GGCACATATAAACCAATTTGCTCAATCAACAACCGAAACTATGAACAGTATTTACACTTT CANACGGCATGTAAACACAAGTGTTGGNTTCATTACAACGCNGAAATTCTGGNCATGAGA NGNACTGCTNTCGCAGCGGTTTCCGAGGCCGAGCAGCTTGGGAAGAAGCGCAAATCCGCA AGGTAGCAGTAANAAAGATCTTTAACAAAAGACCAGTTGAGTACCATGCGGCACACACAT GGCGGGGAACCCGGCCCCAAGGAAGGCCGANTACAGCCCCCGNCAACNGCTTCACGCGGG NACACANGTNAACTTACTCGGCNGGCTCACCGCGCACCACAACCGGAAAAGGAACAGAAG CCCCCAATTGGCCGCACTACCACCACANCGGCTNGGAACNCCACGCTGGAGGNCGGACAT TAAAAACANACCTTGATGCAAAGGCAAGCCCANACAGNACANGCTTNACGCCCTTTAACT CCCGAATCTACNTCTCNCCGGAACNTGCCTGGTCACATCACAAAACCCAAGCAGAACCCT TTAAATTATANCCAAACAACACCAACGCGACTTTCAAAAACACACACTTTCAAGAAACAA TNNAGTACAAACGCTCNACCNCGCGNGGCAACGGGAGGAATTTCCCGGCCCTTAGGTCTN GGCCCCCAAAGNANGGGAGGCAGCCCCCANTGGGGACCACAGGGGCACAACAANGGGANG CAACACCCCGGCGGGACCCAAACCANCACACGGGGCAAATATGGCAGGAACACGACCGAG CAGACCCCACAACAGGCACACCAAAGGGGCAAAANACCACAAAAGAGGGGAACCACACCC CCACTANGGGGGACCACGCAACCGANAACAAAACACACAAACAAAACACTAGTGCGCCAA ACCCGACAAACGCACCGGGACCACCCCNAGACNACCAGANACATNGTATGGGGCCACTGA CATAGAAACACCANACCNAAAANCCCCAGCGCANNACCGCCCCAGACAGACAACTAANNA CGTACAAACCCTNGNGGGCCGCACTCGTACCAACAGGCACACCAGACCCGGCGNATCACG GGACGGACACACNACCNAACCACGGNAANAANCCGCGCANCANAANACAGAGGACTNAGA CNNACAANAACTGGGNNGNCAAACNCAAACCACGCAAAAAAA



consensusID : consensus_7989#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1254
fasta sequence
                              [AAGATCTTAAAAGACAGTGATACAGCGAAATGCGGACGCCAGAGCGATAGCAGAAGTAGGAAAGTATTGTGTAGGCAACGTTGTCGCCCATGCTTTCAAGTGATAGTGGGGATAACACTTAGACAAAAGTAGCTACCATTTTGAGCGAAAACAAACTATTCAACACATAACACTAAATTAGTAGGGAGGATCGCTGTGCCAGGGGCTGTTGATGGACGGCATTGATGGGCGGCAGTTGTTCTTGCTCTGGCACGTTTTTATGTAGAGCGCCGCATTGCTTTAATATCGCACCAATATACTGCTTTAGAGCGTTGGTTTAGAGGTTTGTGTTTGGTTCGAAGCTGGCGAAACACGTGACAGGCAGCCGGTTAGGTTGACCATCGTTGACGCCGGATTGGGCGCTTACCGTGTCGATCTTATATTACTCAATTCAACAAACACAACGTCACATACTCTCATCCTCATATCACATCATATCTTAAAACAAGCTGTTGTACTATAACTATTCGTTTCGCGTATTCGACTGTTAAAGCCTGTGCAGCTGAGCATAGCTATTCCTTTT--TCGCAATCTTAACTAAACGTAGACAGAATCTTACGAATTAATCATACGTGTGTGTGTGTGTGTGTGTGTTGTTTCCTAGAATAATTTTCCTTCTGTAAGGTATATCACGCTAGCTAACTAGTGCCGAAACTATGTGTTTGCCCAGTAGGAACGACCATTATTAGACGATCACACCCTAAAACCGCCAAACTCAACATGAACTTAACTTCCTGAACCGAACGTCGTGTCGTCTCTCTGTTTGAGGCCGTGGTAGTTGTCATTTTGTGAGACAGTGTAACTAAAAGGAAAACGGAATTTAATTGCACCAAGTTTGCCACATCCGATTCATCCCACA--GTGTGTGTATTTGTGTGGCAAGCATTAACGACACAGGCACAGTTGCCAAATTGTGCCATTATGTTTCCATAATGGAAGGAACGATCTTGTAGCAAACGGACACTTTTACTCGAACTCGTACTCGTGCACTGTCTTCGGATGTGTTGCATTCCTTTTCGTTTCAATTGCATTATCTCAGTGGATTATTCTATAGTTTCTTCTGAAACACGATAGCCAGCCAACCCGACCCTATTTGACGAATAAAGATCATCGTGCATCATCATTAGTTGCAGCTAGCAACTGACCCGTGTTAGCGAATAAAGGGCGCCACATCATATGCTTTAAGCTCCTACATGTGAGATGCCGTCTCCGCATGAGA]

[+] EMBL BX609588             [AAGATCTTAAAAGACAGTGATACAGCGAAATGCGGACGCCAGAGCGATAGCAGAAGTAGGAAAGTATTGTGTAGGCAACGTTGTCGCCCATGCTTTCAAGTGATAGTGGGGATAACACTTAGACAAAAGTAGCTACCATTTTGAGCGAAAACAAACTATTCAACACATAACACTAAATTAGTAGGGAGGATCGCTGTGCCAGGGGCTGTTGATGGACGGCATTGATGGGCGGCAGTTGTTCTTGCTCTGGCACGTTTTTATGTAGAGCGCCGCATTGCTTTAATATCGCACCAATATACTGCTTTAGAGCGTTGGTTTAGAGGTTTGTGTTTGGTTCGAAGCTGGCGAAACACGTGACAGGCAGCCGGTTAGGTTGACCATCGTTGACGCCGGATTGGGCGCTTACCGTGTCGATCTTATATTACTCAATTCAACAAACACAACGTCACATACTCTCATCCTCATATCACATCATATCTTAAAACAAGCTGTTGTACTATAACTATTCGTTTCGCGTATTCGACTGTTAAAGCCTGTGCAGCTGAGCATAGCTATTCCTTTT  TCGCAATCTTAACTAAACGTAGACAGAATCTTACGAATTAATCATACCTGTGTGTGTGTGTGTGTGTGTTGTTTCCTAGAATAATTTTCCTTCTGTAAGGTATATCACGCTAGCTAACTAGTGCCGAAACTATGTGTTTGCCCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08INA             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CACATCATATCTTAAAAAAAGCTGTTGTACTATAACTATTCGTTTCGCGTATTCGACTGTTAAAGCCTGTGCAGCTGAGCATAGCTATTCCTTTTTCTCGCAATCTTAACTAAACGTAGACAGAATCTTACGAATTAATCATAC    GTGTGTATGTGTGTGTGTTGTTTCCTAGAATAATTTTCCTTCTGTAAGGTATATCACGCTAGCTAACTAGTGCCGGAACTATGTGTTTGCCCAGTAGGAACGACCATTATTAGACGATCACACCCTAAAACCGCCAAACTCAACGTGAACTTAACTACCTGAACCGAACGTCGTGTCGTATCTCTGTTTGAGGCCGTGGTAGTTGTCATTTTGTGAGACAGTGTAACTAAAAGGAAAACGGAATTTAATTGCACCAAGTTTGCCACATCCGATTCATCCCACAGTGTGTGTGTATGTGTGTGGCAAGCATTAACGACACAGGCACAGTTGCCAAATTGTGCCATTATGTTTCCATAATGGAAGGAACGATCTTGTAGCAAACGGACACTTTTACTCGAACTCGTACTCGTGCACTGTCTTCGGATGTGTTGCATTCCTTTTCGTTTCAATTGCATTATCTCAGTGGATTATTCTATAGTTTCTTCTGAAACACGGTAGCCAGCCAACCCGACCCTATTTGACGAATAAAGATCATCGTGCATCATttg                                                                                               ]
[+] EMBL BX610069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTGCAGCTGAGCATAGCTATTCCTTTT  TCGCAATCTTAACTAAACGTAGACAGAATCTTACGAATTAATCATACGTGTGTGTGTGTGTGTGTGTGTTGTTTCCTAGAATAATTTTCCTTCTGTAAGGTATATCACGCTAGCTAACTAGTGCCGAAACTATGTGTTTGCCCAGTAGGAACGACCATTATTAGACGATCACACCCTAAAACCGCCAAACTCAACATGAACTTAACTTCCTGAAACGAACGTCGTGTCGTCTCTCTGTTTGAGGCCGTGGTAGTTGTCATTTTGTGAGACAGTGTAACTAAAAGGAAAACGGAATTTAATTGCACCAAGTTTGCCACATCCGATTCATCCCACA  GTGTGTGTATTTGTGTGGCAAGCATTAACGACACAGGCACAGTTGCCAAATTGTGCCATTATGTTTCCATAATGGAAGGAACGATCTTGTAGCAAACGGACACTTTTACTCGAACTCGTACTCGTGCACTGTCTTCGGATGTGTTGCATTCCTTTTCGTTTCAATTGCATTATCTCAGTGGATTATTCTATAGTTTCTTCTGAAACACGATAGCCAGCCAACCCGACCCTATTTGACGAATAAAGATCATCGTGCATCATCATTAGTTGCAGCTAGCAACTGACCCGTGTTAGCGAATAAAGGGCGCCACATCATATGCTTTAAGCTCCTACATGTGAGATGCCGTCTCCGCATGAGA]
[+] EMBL BX625298             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTTTT  TCGCCATCTTAACTAAACGTAGACAGAATCTTACGAATTAATCATACGTGTGTGTGTGTGTGTGTGTGTTGTTTCCTAGAATAATTTTCCTTCTGTAAGGTATATCACGCTAGCTAACTAGTGCCGAAACTATGTGTTTGCCCAGTAGGAACGACCATTATTAGACGATCACACCCTAAAACCGCCAAACTCAACATGAACTTAACTTCCTGAACCGAACGTCGTGTCGTCTCTCTGTTTGAGGCCGTGGTAGTTGTCATTTTGTGAGACAGTGTAACTAAAAGGAAAACGGAATTTAATTGCACCAAGTTTGCCACATCCGATTCATCCCACA  GTGTGTGTATTTGTGTGGCAAGCATTAACGACACAGGCACAGTTGCCAAATTGTGCCATTATGTTTCCATAATGGAAGGAACGATCTTGTAGCAAACGGACACTTTTACTCGAACTCGTACTCGTGCACTGTCTTCGGATGTGTTGCATTCCTTTTCGTTTCAATTGCATTATCTCAGTGGATTATTCTATAGTTTCTTCTGAAACACGATAGCCAGCCAACCCGACCCTATTTGACGAATAAAGATCATCGTGCATCATCATTAGTTGCAGCTAGCAACTGACCCGTGTTAGCGAATAAAGGGCGCCACATCATATGCTTTAAGCTC                              ]


>consensus_7989#1 AAGATCTTAAAAGACAGTGATACAGCGAAATGCGGACGCCAGAGCGATAGCAGAAGTAGG AAAGTATTGTGTAGGCAACGTTGTCGCCCATGCTTTCAAGTGATAGTGGGGATAACACTT AGACAAAAGTAGCTACCATTTTGAGCGAAAACAAACTATTCAACACATAACACTAAATTA GTAGGGAGGATCGCTGTGCCAGGGGCTGTTGATGGACGGCATTGATGGGCGGCAGTTGTT CTTGCTCTGGCACGTTTTTATGTAGAGCGCCGCATTGCTTTAATATCGCACCAATATACT GCTTTAGAGCGTTGGTTTAGAGGTTTGTGTTTGGTTCGAAGCTGGCGAAACACGTGACAG GCAGCCGGTTAGGTTGACCATCGTTGACGCCGGATTGGGCGCTTACCGTGTCGATCTTAT ATTACTCAATTCAACAAACACAACGTCACATACTCTCATCCTCATATCACATCATATCTT AAAACAAGCTGTTGTACTATAACTATTCGTTTCGCGTATTCGACTGTTAAAGCCTGTGCA GCTGAGCATAGCTATTCCTTTTTCGCAATCTTAACTAAACGTAGACAGAATCTTACGAAT TAATCATACGTGTGTGTGTGTGTGTGTGTGTTGTTTCCTAGAATAATTTTCCTTCTGTAA GGTATATCACGCTAGCTAACTAGTGCCGAAACTATGTGTTTGCCCAGTAGGAACGACCAT TATTAGACGATCACACCCTAAAACCGCCAAACTCAACATGAACTTAACTTCCTGAACCGA ACGTCGTGTCGTCTCTCTGTTTGAGGCCGTGGTAGTTGTCATTTTGTGAGACAGTGTAAC TAAAAGGAAAACGGAATTTAATTGCACCAAGTTTGCCACATCCGATTCATCCCACAGTGT GTGTATTTGTGTGGCAAGCATTAACGACACAGGCACAGTTGCCAAATTGTGCCATTATGT TTCCATAATGGAAGGAACGATCTTGTAGCAAACGGACACTTTTACTCGAACTCGTACTCG TGCACTGTCTTCGGATGTGTTGCATTCCTTTTCGTTTCAATTGCATTATCTCAGTGGATT ATTCTATAGTTTCTTCTGAAACACGATAGCCAGCCAACCCGACCCTATTTGACGAATAAA GATCATCGTGCATCATCATTAGTTGCAGCTAGCAACTGACCCGTGTTAGCGAATAAAGGG CGCCACATCATATGCTTTAAGCTCCTACATGTGAGATGCCGTCTCCGCATGAGA



consensusID : consensus_7989#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 844
fasta sequence
                              [ATAATAATGATCATAGACGAAGAATGAAGCAGTAGGAAACAGAATACAAATTATGATGTAAGTTTAAACATAGAAATTATAACCGTAATTCGTTTTTGTATTTGGTTTAAGTTTACATCTAGCATTTAGTTGACAAAGGTTGTTAAGGAAAACTTTATTTTTTTTTACTATAAGATTATCTCACTCGAGTTTTAAACCTTCAAAGCAAACAACAACAATAACAACCACAACGGCAAAAACAAATGCAAACGATCCGACAATTTTTAATGTTACACTGCCAATTATAAGACCTTCAGGAGCCACAACAAACTCAAGATCATCATACAAACAACAACTGCA--AAAAGCTGAACAATATCAATGTCGTCATATTGGTTGTTTTGTAACACTAACTCTTCTCATTCAAAAGTGGCAAGCGGTTGAAGTC-TTTTAGTTGAATTTGAATTACATACTTCACACAAGCACACGGTGTCTATGAACAGCGCAAAACACTCTCTATCCCATGCAAACTCTGTCGTATCACC--CACAGCACACGCAATACTATCTGACGCTTGTATTTTGCAAATAGAACAATTGCTCAATCAACAAAGAAACTATGAAAGTATTACACTTCAAGGATGTAAAAAGTGTTGATTATACAAGCGAAATTTGGTTGATTGTTGCTTCGAGGTTCGAGGCGAGCAGCGGAGAGCGCAATCGAAGTAGAGTAAAGATCTTAAAAGACACAGTG-ATACAGCGGACGCCAGAACGATAGCAGAAGTAGGAAAGAATTGTGTAGGCAACGTTGTCGCCCATGCTTTCAGGTGATAGTGGAGATAACACTTAGACAAAAGTAGCTACCATTTTG]

[+] EMBL BM623316             [ATAATAATGATCATAGACGAAGAATGAAGCAGTAGGAAACAGAATACAAATTATGATGTAAGTTTAAACATAGAAATTATAACCGTAATTCGTTTTTGTATTTGGTTTAAGTTTACATCTAGCATTTAGTTGACAAAGGTTGTTAAGGAAAACTTTATTTTTTTTTACTATAAGATTATCTCACTCGAGTTTTAAACCTTCAAAGCAAACAACAACAATAACAACCACAACGGCAAAAACAAATGCAAACGATCCGACAATTTTTAATGTTACACTGCCAATTATAAGACCTTCAGGAGCCACAACAAACTCAAGATCATCATACAAACAACAACTGCA  AAAAGCTGAACAATATCAATGTCGTCATATTGGTTGTTTTGTAACACTAACTCTTCTCATTCAAAAGTGGCAAGCGGTTGAAGTC TTTTAGTTGAATTTGAATTACATACTTCACACAAGCACACGGTGTCTGTGAACAGCGCAAAACACTCTCTATCCCATGCAAACTCTATCGTATCACC  CACAGCACACGCAATACTATCTGACGCTTGTATTTTGCAAATATAACAATTGCTCAATCAACAAAGAAACTATGAAAGTATTAC                                                                                                                                                                                                                                                ]
[+] EMBL BM623326             [                                                                                                                                                                     TACTTTAAGATTATCTCACTCGAGTTTTAAACCTTCAAAGCAAACAACAACAATAACAACCACAACGGCAAAAACAAATGCAAACGATCCGACAATTTTTAATGTTACACTGCCAATTATAAGACCTTCAGGAGCCACAACAAACTCAAGATCATCATACAAACAACAACAACAACAAAAACTGAACAATATCAATGTCGTCATATTGATTGTTTTGTAACACTAACTCTTCTCATTCAAAAGTGGCAAGCGGTTGAAGTCTTTTTAGTTGAATTTGAATTACATACTTCACACAAGCACACGGTGTCTATGAACGGCGCAACACACTCTCTATCCCATGCAAACTCTGTCGTATCACC  CACAACAAACGCAATACTATCTGACGCTTGTATTTTGCAAATAGAACAATTGCTCAATCAACAAAGAAACTATGAAAGTATTACACTTCAAGGATGTAAAAAGTGTTGATTATACAAGCGAAATTTGGTTGATTGTTGCTTCGAGGTTCGAGGCGAGCAGCGGAGAGCGCAATCGAAGTAGAGTAAAGATCTTAAAAGACACAGTG ATACAGCGGACGCCAGAACGATAGCAGAAGTAGGAAAGAATTGTGTAGGCAACGTTGTCGCCCATGCTTTCAGGTGATAGTGGAGATAACACTTAGACAAAAGTAGCTACCATTTTG]
[+] EMBL CNS08IN9             [                                                                                                                                                                                                                                                                                                                                                           TGAACAATATCAGTGTCGTCATATTGGTTGTTTTGTAACACTAACTCTTCTCATTCAAAAGTGACAAGCGGTTGAAGTC TTTTAGTTGAATTTGAATTACATACTTCACACAAGCACACGGTGTCTATGAACAGCGCAATACACTCTCTATCCCATGCAAACTCTGTCGTATCACCAGCACAGCACACGCAATACTATCTGACGCTTGTATTTTGCAAATAGAACAATTGCTCAATCAACAAAGAAACTATGAAAGTATTACACTTCAAGGATGTAAAAAGTGTTGATTATACAAGCGAAATTTGGTTGATTGTTGCTTCGAGGTT    GCGAGCAGCGGAGAGCGCAATCGAAGTAGACTAAAGATCTTAAAAGACACAGTGTATACAG                                                                                                               ]


>consensus_7989#2 ATAATAATGATCATAGACGAAGAATGAAGCAGTAGGAAACAGAATACAAATTATGATGTA AGTTTAAACATAGAAATTATAACCGTAATTCGTTTTTGTATTTGGTTTAAGTTTACATCT AGCATTTAGTTGACAAAGGTTGTTAAGGAAAACTTTATTTTTTTTTACTATAAGATTATC TCACTCGAGTTTTAAACCTTCAAAGCAAACAACAACAATAACAACCACAACGGCAAAAAC AAATGCAAACGATCCGACAATTTTTAATGTTACACTGCCAATTATAAGACCTTCAGGAGC CACAACAAACTCAAGATCATCATACAAACAACAACTGCAAAAAGCTGAACAATATCAATG TCGTCATATTGGTTGTTTTGTAACACTAACTCTTCTCATTCAAAAGTGGCAAGCGGTTGA AGTCTTTTAGTTGAATTTGAATTACATACTTCACACAAGCACACGGTGTCTATGAACAGC GCAAAACACTCTCTATCCCATGCAAACTCTGTCGTATCACCCACAGCACACGCAATACTA TCTGACGCTTGTATTTTGCAAATAGAACAATTGCTCAATCAACAAAGAAACTATGAAAGT ATTACACTTCAAGGATGTAAAAAGTGTTGATTATACAAGCGAAATTTGGTTGATTGTTGC TTCGAGGTTCGAGGCGAGCAGCGGAGAGCGCAATCGAAGTAGAGTAAAGATCTTAAAAGA CACAGTGATACAGCGGACGCCAGAACGATAGCAGAAGTAGGAAAGAATTGTGTAGGCAAC GTTGTCGCCCATGCTTTCAGGTGATAGTGGAGATAACACTTAGACAAAAGTAGCTACCAT TTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7989#0      GCAGAATTGCCCCCGGATTACTTCAGTGAGCCACAACAAACTCAAGATCATCATACAAAC 60
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      ------------------------------------------------------------
                                                                                  

consensus_7989#0      AACAACTGCAAAAAGCTGAACAATATCAAATGTCGTCATATATGGTATGTTTTGTAACAC 120
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      ------------------------------------------------------------
                                                                                  

consensus_7989#0      TAACTACTTCTCATATCAAAAGTGTGCAAGCGGTTGAAGTCTTTTAGTTGAATTTGACAT 180
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      ------------------------------------------------------------
                                                                                  

consensus_7989#0      TACATACTTCACACAAGCACACGGTGTCTGTGAACAGCGCAAAACACTCTCTATCCCATG 240
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      ------------------------------------------------------------
                                                                                  

consensus_7989#0      CCAAACTCTATCGTATCACCCACAGACACGCAATACTATNCTGACGCTATGTATTCTCTC 300
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      -----------------------------------------------------AAGATCT 7
                                                                                  

consensus_7989#0      GGCACATATAAACCAATTTGCTCAATCAACAACCGAAACTATGAACAGTATTTACACTTT 360
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      TAAAAGACAGTGATACAGCGAAATGCGGACGCCAGAGCGATAGCAGAAGTAGGAAAGTAT 67
                                                                                  

consensus_7989#0      CANACGGCATGTAAACACAAGTGTTGGNTTCATTACAACGCNGAAATTCTGGNCATGAGA 420
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      TGTGTAGGCAACGTTGTCGCCCATGCTTTCAAGTGATAGTGGGGATAACACTTAGACAAA 127
                                                                                  

consensus_7989#0      NGNACTGCTNTCGCAGCGGTTTCCGAGGCCGAGCAGCTTGGGAAGAAGCGCAAATCCGCA 480
consensus_7989#2      ------------------------------------------------------------
consensus_7989#1      AGTAGCTACCATTTTGAGCGAAAACAAACTATTCAACACATAACACTAAATTAGTAGGGA 187
                                                                                  

consensus_7989#0      AGGTAGCAGTAANAAAGATCTTTAACAAAAGACCAGTTGAGTACCATGCGGCACACACAT 540
consensus_7989#2      --------ATAATAATGATCATAGACGAAGAATGAAGC-AGTAGGAAACAGAATACAAAT 51
consensus_7989#1      GGATCGCTGTGCCAGGGGCTGTTGATGGACGGCATTGATGGGCGGCAGTTGTTCTTGCTC 247
                               *   *  *    *  *   *           *         *         

consensus_7989#0      GGCGGGGAACCCGGCCCCAAGGAAGGCCGANTACAGC--CCCCGNCAACNGCTTCACGCG 598
consensus_7989#2      TATGATGTA---AGTTTAAACATAGA--AATTATAAC--C---GTAATTCGTTTTT---- 97
consensus_7989#1      TGGCACGTTTTTATGTAGAGCGCCGCATTGCTTTAATATCGCACCAATATACTGCTTTAG 307
                            *           *     *      *  *    *      *     *       

consensus_7989#0      GGNACACANGTNAACTTACTCGGCNGGCTCACCGCGCACCACAACCGGAAAAGGAAC--- 655
consensus_7989#2      -GTATTTGGTTTAAGTT-TACATCTAGCATTTAGTTGACAAAGGTTGTTAA-GGAAA--- 151
consensus_7989#1      AGCGTTGGTTTAGAGGTTTGTGTTTGGTTCGAAGCTGGCGAAACACGTGACAGGCAGCCG 367
                       *        *  *  *         *      *    * *     *  *  ** *    

consensus_7989#0      ---AGAAGCCCCCAATTGGCCGCACTACCAC---CACAN-----CGGCTNGGAACNCCAC 704
consensus_7989#2      ---ACTTTATTTTTTTTTACTATAAGATTAT---CTCACT----CGAGTTTTAAACCTTC 201
consensus_7989#1      GTTAGGTTGACCATCGTTGACGCCGGATTGGGCGCTTACCGTGTCGATCTTATATTACTC 427
                         *            *         *       *  *      **       *     *

consensus_7989#0      GC---TGGAGGNCGGACATTA-AAAA---CANACCTT----GATGCAAAGGCAAGCCCAN 753
consensus_7989#2      AA---AGCAAAC--AACAACA-ATAA---CAACCACA----ACGGCAAAAACAAATGCAA 248
consensus_7989#1      AATTCAACAAACACAACGTCACATACTCTCATCCTCATATCACATCATATCTTAAAACAA 487
                              *      **   * * *    **  *           ** *    *   ** 

consensus_7989#0      ACAGNA---C-ANGCTTNACGCCCTTTAACTCCCGAATCTACNTCTCNCCGGAAC----N 805
consensus_7989#2      ACGATC---CGACAATTTTTAATGTTACACTGCCAATTATAAGACCTTCAGGAGC----C 301
consensus_7989#1      GCTGTTGTACTATAACTATTCGTTTCGCGTATTCGACTGTTAAAGCCTGTGCAGCTGAGC 547
                       *       * *    *       *        * * * *          * * *     

consensus_7989#0      TGCCTGGTCACATCA-CAAAACCCAAGCAGAACCCTTTAAATTATANCCAAACAACACCA 864
consensus_7989#2      ACAACAAACTCAAGATCATCATACAAACAACAACTGCAAAA----AGCTGAACAATATCA 357
consensus_7989#1      ATAGCTATTCCTTTTTCGCAATCTTAACTAAACGTAGACAGAATCTTACGAATTAATCAT 607
                                *     *   *    * *   *       *          **  *     

consensus_7989#0      ACGC-GACTTTCAAAAACACACACTTTCAAGAAACAATNNAGTACAAACGCTCNACCNCG 923
consensus_7989#2      ATGT-CGTC-------ATATTGGTTGTTTTGTAACA-CTAACTCTTCTCATTCAAAAGTG 408
consensus_7989#1      ACGTGTGTGTGTGTGTGTGTGTGTTGTTTCCTAGAA--TAATTTTCCTT-CTGTAAGGTA 664
                      * *                     * *     *  *    * *        *  *     

consensus_7989#0      CGNGGCAACGGGAGGAATTTCCCGGCCCTTAGGTCTNGGCCCCCAAAGNANGGGAGGCAG 983
consensus_7989#2      GCAAGCGGTTGAAGTCTTTTAGTTGAATTTGAATTACATACTTCACACAAGCACACGGTG 468
consensus_7989#1      TATCACGCTAGCTAACTAGTGCCGAAACT--ATGTGTTTGCCCAGTAGGAACGACCATTA 722
                           *    *        *        *           *     *  *          

consensus_7989#0      CCCCCANTGGGGACCACAGGGGCACAACAANGGGANGCAACACCCCGGCGGGACCCAAAC 1043
consensus_7989#2      TCT---ATGAACAGCGCAAAACACTCTCTATCCCATGCAA-ACTCTGTCGTATCACCCAC 524
consensus_7989#1      TTA--GACGATCACACCCTAAAACCGCCAAACTCAACATGAACTTAACTTCCTGAACCGA 780
                              *   *   *          * *    *      **                 

consensus_7989#0      CANCACACGGGGCAAATATGGCAGGAAC--ACG-ACCGAGCAGACCCCACAACAGGCACA 1100
consensus_7989#2      -AGCACACG---CAATACTATCTGACGC--TTGTATTTTGCAAATAGAACAATTGCTCAA 578
consensus_7989#1      -ACGTCGTGTCGTCTCTCTGTTTGAGGCCGTGGTAGTTGTCATTTTGTGAGACAGTGTAA 839
                       *   *  *         *    *   *    * *     **         *  *    *

consensus_7989#0      CCAAAGGGGCAAAANACCACAAAAGAGGGGAACC----ACACCCCCACTANGGGGGACCA 1156
consensus_7989#2      TCAACA----AAGAAACTATGAAAGT-----ATT----ACACTTCAAGGATGTAAAA--- 622
consensus_7989#1      CTAAAAGGAAAACGGAATTTAATTGCACCAAGTTTGCCACATCCGATTCATCCCACAGTG 899
                        **      **   *     *  *             ***        *      *   

consensus_7989#0      CGCAACCGANAACAAAACACACAAACAAAACACTAGTGCGCCAAACCCGACAAACGCACC 1216
consensus_7989#2      --------AGTGTTGATTATACAAGCGAAAT-TTGGT----------TGATTGTTGCTTC 663
consensus_7989#1      TGTGTATTTGTGTGGCAAGCATTAACGACAC--AGGCACAGTTG-CCAAATTGTGCCATT 956
                                          *  * * * *     *             *      *   

consensus_7989#0      GGGACCACCC--CNAGACNACCAGANACATNGTATG-GGGCCACTGACATAGAAACACCA 1273
consensus_7989#2      GAGGTT------CGAGGCGAGCAG------CGGAGA-GCGCAATCGAAGTAGAG-TAAAG 709
consensus_7989#1      ATGTTTCCATAATGGAAGGAACGATCTTGTAGCAAACGGACACTTTTACTCGAACTCGTA 1016
                        *                * *         * *   *  *        * **       

consensus_7989#0      NACCNAAAANCCCCA-----GCGCANNACCG--CCCCAGACAGACAACTAANNA--CGTA 1324
consensus_7989#2      ATCTTAAAAGACACA-----GTGATACAGCGGACGCCAGAACGATAGCAGAAGT--AGGA 762
consensus_7989#1      CTCGTGCACTGTCTTCGGATGTGTTGCATTCCTTTTCGTTTCAATTGCATTATCTCAGTG 1076
                        *    *            * *    *        *      *   *         *  

consensus_7989#0      CAAACCCTNGNGG--------GCCGCACTCGTACCAACAGGCACA-CCAGACCCGGCGNA 1375
consensus_7989#2      AAGAATTGTGTAG--------GCAACGTTGTCGCC------CATG-CT---TTCAGGTGA 804
consensus_7989#1      GATTATTCTATAGTTTCTTCTGAAACACGATAGCCAGCCAACCCGACCCTATTTGACGAA 1136
                       *          *        *   *       **      *    *            *

consensus_7989#0      TCACGGGACGGACACACNACCNAACCA---CGGNAANAANCCGCGCANCANAANACAGAG 1432
consensus_7989#2      TAGTGGAGATAACACTTAGACAAAAGT---AGCTACCATTTTG----------------- 844
consensus_7989#1      TAAAGATCATCGTGCATCATCATTAGTTGCAGCTAGCAACTGACCCGTGTTAGCGAATAA 1196
                      *   *         *     *          *  *  *                      

consensus_7989#0      GACTNAGACNNACAANAACTGGGNNGNCAAACNCAAACCACGCAAAAAAA-------- 1482
consensus_7989#2      ----------------------------------------------------------
consensus_7989#1      AGGGCGCCACATCATATGCTTTAAGCTCCTACATGTGAGATGCCGTCTCCGCATGAGA 1254
                                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)