cluster # 8000

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Anopheles gambiae
cluster # 8000 cluster # 8000 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8000#0 length = 1375 sequences # 3

consensus_8000#1 length = 1370 sequences # 4
consensus_8000#2 length = 585 sequences # 1

consensusID : consensus_8000#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1375
fasta sequence

                              [TTCGTTTGTAGAATATCGCATTCTGTTAAGTTCACTTATCCACCCAAGGTTTTGGCTGGATAGAAAGGAAGCTTTGCGCACTGCAACGCTGTGGCCACTGATGCAGGTTCTTCTCGCTACAACAAAAAATATGAAGGCCACGACGACCAGTGCTGGACGGTGTACAAAGGATGTATGATAATTTAATTTGCTTCTCGGTCGTGCTCGCTCGGATGGAAGCACGGTAGAGCAGGGTAGGGTTTTGCGTGATTTTGGTGGGTGCGCCACAGTGGCAGCAGCAGCAGCAGCAGACGCGATGTCCCACAGTCCGCCCAACTACATGGACGGTGTTCCGGTGAAAATATCGGAACGGTTTAAACCGCCGCCGAAGATAGTGCTGCCGCAGGGGTTGTCAACCGTCTGAATCAATACGATGTCGGGCAGGTGCTGCATGACTCACGCTACGAGGGCGAACTGGAGGACACGGTACTTAAGCGCATCGCGGAATGCAAAGCGGTGCGGGAGCGCGAACGCTACGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGTACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCACCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCT-GGATGACGACGTGCAGGATTC-GGCGACGCGACGAACGCGGAACAATAGTCAAACGATTGCCGATCGTCAGACTGCGCGCGAACAAGATGCTGTATCGAGCAATGCCGGGGAGCGAAGCGGCGTGGACTACACTATCTACAATCAG-TAACGCAGCCGGATCAGAACACAGTGAAGCGCATCAGCTCCATGGGCTTTCCACTCGAACGGGTAGTGTGGGTGCTAAAACGAATTGGAAACGATGATAAGAAGATAATCGAACATCTTATACCGCTGAGTGAGCTGCTGGATCTGGGGTTCGAGGGAGAGAAAATCTCGGACGCACTGCTGAAGTTCGGCAACAATAAGCATAAAGCGCTTGATTATTTGATTTCGTAGGAGTGTTTTTCCTGTGCCCGCGGGATCGGCTTGTTGGTGAAATGGGTGATTCGGGTGAACTTTGCGGAGAGAAAACTTAAAG]

[+] EMBL CNS08YJ0             [TTCGTTTGTAGAATATCGCATTCTGTTAAGTTCACTTATCCACCCAAGGTTTTGGCTGGATAGAAAGGAAGCTTTGCGCACTGCAACGCTGTGGCCACTGATGCAGGTTCTTCTCGCTACAACAAAAAATATGAAGGCCACGACGACCAGTGCTGGACGGTGTACAAAGGATGTATGATAATTTAATTTGCTTCTCGGTCGTGCTCGCTCGGATGGAAGCACGGTAGAGCAGGGTAGGGTTTTGCGTGATTTTGGTGGGTGCGCCACAGTGGCAGCAGCAGCAGCAGCAGACGCGATGTCCCACAGTCCGCCCAACTACATGGACGGTGTTCCGGTGAAAATATCGGAACGGTTTAAACCGCCGCCGAAGATAGTGCTGCCGCAGGGGTTGTCAACCGTCTGAATCAATACGATGTCGGGCAGGTGCTGCATGACTCACGCTACGAGGGCGAACTGGAGGACACGGTACTTAAGCGCATCGCGGAATGCAAAGCGGTGCGGGAGCGCGAACGCTACGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGTACTTTTACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCACCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCA CTGGGATGACGACGTGCAGGATTCGGGCGACGCGACGAACGCGGAACAATAGTCAAACGATTGCCGAT                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08YJ1             [                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGCAGGTGCTGCATTACTCACGCTACGAGGGCGAACTGGAGGACACGGTACTTAAGCGCATCGCGGAATGCAAAGCGGTGCGGGAGCGCGAACGCTACGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGTACGTCGAAAAATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCACCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCT GGATGACGACGTGCAGGATTC GGCGACGCGACGAACGCGGAACAATAGTCAAACGATTGCCGATCGTCAGACTGCGCGCGAACAAGATGCTGTATCGAGCAATGCCGGGGAGCGAAGCGGCGTGGACTACACTATCTACAATCAG TAACGCAGCCGGATCAGAACACAGTGAAGCGCATCAGCTCCATGGGCTTTCCACTCGAACGGGTAGTGTGGGTGCTAAAACGAATTGGAAACGATGATAAGAAGATAATCGAACATCTTATACCGCTGAGTGAGCTGCTGGATCTGGGGTTCGAGGGAGAGAAAATCTCGGACGCACTGCTGAAGTTCGGCAACAATAAGCATAAAGCGCTTGATTATTTGATTTCGTAGGAGTGTTTTTCCTGTGCCCGCGGGATCGGCTTGTTGGTGAAATGGGTGATTCGGGTGAACTTTGCGGAGAGAAAACTTAAAG]
[+] EMBL BX615465             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCT GGATGACGACGTGCAGGATTC GGCGACGCGACGAACGCGGAACAATAGTCAAACGATTGCCGATCGTCAGACTGCGCGCGAACAAGATGCTGTATCGAGCAATGCCGGGGAGCGAAGCGGCGTGGACTACACTATCTACAATCAGCTAACGCAGCCGGATCAGAACACAGTGAAGCGCATCAGCTCCATGGGCTTTCCACTCGAACGGGTAGTGTGGGTGCTAAAACGAATTGGAAACGATGATAAGAAGATAATCGAACATCTTATACCGCTGAGTGAGCTGCTGGATCTGGGGTTCGAGGGAGAGAAAATCTCGGACGCACTGCTGAAGTTCGGCAACAATAAGCATAAAGCGCTTGATTATTTGATTTCGT                                                                                    ]




>consensus_8000#0
TTCGTTTGTAGAATATCGCATTCTGTTAAGTTCACTTATCCACCCAAGGTTTTGGCTGGA
TAGAAAGGAAGCTTTGCGCACTGCAACGCTGTGGCCACTGATGCAGGTTCTTCTCGCTAC
AACAAAAAATATGAAGGCCACGACGACCAGTGCTGGACGGTGTACAAAGGATGTATGATA
ATTTAATTTGCTTCTCGGTCGTGCTCGCTCGGATGGAAGCACGGTAGAGCAGGGTAGGGT
TTTGCGTGATTTTGGTGGGTGCGCCACAGTGGCAGCAGCAGCAGCAGCAGACGCGATGTC
CCACAGTCCGCCCAACTACATGGACGGTGTTCCGGTGAAAATATCGGAACGGTTTAAACC
GCCGCCGAAGATAGTGCTGCCGCAGGGGTTGTCAACCGTCTGAATCAATACGATGTCGGG
CAGGTGCTGCATGACTCACGCTACGAGGGCGAACTGGAGGACACGGTACTTAAGCGCATC
GCGGAATGCAAAGCGGTGCGGGAGCGCGAACGCTACGAGCCCAACATACCATCATTCGGT
TCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACAC
GTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAG
CGGCACCAGCGGTGGTGGTGGTACGTCGACCTATGCGCCGAACTACGGTTACACCAGCAC
ACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGG
TACGGCACCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGG
CAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCC
GGACATTATGCGGCAGCTGGATGACGACGTGCAGGATTCGGCGACGCGACGAACGCGGAA
CAATAGTCAAACGATTGCCGATCGTCAGACTGCGCGCGAACAAGATGCTGTATCGAGCAA
TGCCGGGGAGCGAAGCGGCGTGGACTACACTATCTACAATCAGTAACGCAGCCGGATCAG
AACACAGTGAAGCGCATCAGCTCCATGGGCTTTCCACTCGAACGGGTAGTGTGGGTGCTA
AAACGAATTGGAAACGATGATAAGAAGATAATCGAACATCTTATACCGCTGAGTGAGCTG
CTGGATCTGGGGTTCGAGGGAGAGAAAATCTCGGACGCACTGCTGAAGTTCGGCAACAAT
AAGCATAAAGCGCTTGATTATTTGATTTCGTAGGAGTGTTTTTCCTGTGCCCGCGGGATC
GGCTTGTTGGTGAAATGGGTGATTCGGGTGAACTTTGCGGAGAGAAAACTTAAAG

consensusID : consensus_8000#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1370
fasta sequence

                              [CCGGACGAGCTGTCCAGCGCGAGCGATGATAACGATGCGGATGGTGAGCGGCCCGCCCGAGCTGCCCGAATGATCGCGAACGGGTCCGACGAAGACGACTACGAGGAGGAGAACGATGAATCTGCCCCGTCCGGGTCGTCGGACGAGCGCACCACCACCGCTCAAGCGAAACCGTTCGACCATATGAGCCAGCTAAGCTCGATACTGGTACCGACTGTGATACGGGACACAGTACCCAGTGCTGTGGCCGCGCCCGCTGCTAACCCAAATGTACTCGCGAAAGCCACCAGCACCACTATCATTCCAAAGACCGAAATGGCCGCCTCGCCGAATGCCACATTTGGGAGCAACAACAACAACAATAATAATAATAACAATAATAATTATAATAAAATCAATTACTCGGACTTTGAGAACGATACCTCGAGCCCGTTCGACAACATGGAGCTGCGTACGATCAACGATTTGGATATTTTGGCGCAAGTGCTGAAGCAAAACACTACGCTTTCCAGCCCAGCGGAGTGAAGCGGTTCGGCCGGACACGGGCGAAACTCCGAAAGAGCAGGTGGAAGATACGAATCGGCAACCGGTGGCCAATGTGCAGTCACCGGCTTTACCAGCCACGGAACAGCGGCAGCTACCGCCACAACAACAATCGCATCCGCAACAACAGCAACAACCGGTAATTCAAAATCCAACTCCAATTGCGACCAATCCGTATGGTACGGCGTACGGCACGAATCAACAGTATTCGATGTATCCGGCCCA-GTACCAGCAACCGCCAGGCGCCGCTCAA-A-AATCGATTGCCGGTGTGGCCGACTATCTTCCTTCGCCCTACAGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATAC-GAAACTCCACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCG-AACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATG]

[+] EMBL BM635958             [CCGGACGAGCTGTCCAGCGCGAGCGATGATAACGATGCGGATGGTGAGCGGCCCGCCCGAGCTGCCCGAATGATCGCGAACGGGTCCGACGAAGACGACTACGAGGAGGAGAACGATGAATCTGCCCCGTCCGGGTCGTCGGACGAGCGCACCACCACCGCTCAAGCGAAACCGTTCGACCATATGAGCCAGCTAAGCTCGATACTGGTACCGACTGTGATACGGGACACAGTACCCAGTGCTGTGGCCGCGCCCGCTGCTAACCCAAATGTACTCGCGAAAGCCACCAGCACCACTATCATTCCAAAGACCGAAATGGCCGCCTCGCCGAATGCCACATTTGGGAGCAACAACAACAACAATAATAATAATAACAATAATAATTATAATAAAATCAATTACTCGGACTTTGAGAACGATACCTCGAGCCCGTTCGACAACATGGAGCTGCGTACGATCAACGATTTGGATATTTTGGCGCAAGTGCTGAAGCAAAACACTACGCTTTCCAGCCCAGCGGAGTGAAGCGGTTCGGCCGGACACGGGCGAAACTCCGAAAGAGCAGGTGGAAGATACGAATCGGCAACCGGTGGCCAATGTGCAGTCACCGGCTTTACCAGCCACGGAACAGCGGCAGCTACCGCCACAACAACAATCGCATCCGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX618986             [                                                                                                                                                                                                                                                                                                                                                                                                                                 GATACCTCGAGCCCGTTCGACAACATGGAGTTGCGTACGATCAACGATTTGGATATTTTGGCGCAAGTGCTGAAGCAAAACACTACGCTCACCAGCCCAGC GAGTGAAGCGGTTAGGCCGGACACGGGCGAAACCCCGAAAGAGCAGGTGGAAGATACGAATCGGCAACCGGTGGCCAATGTGCAGTCACCGGCTTTACCAGCCACGGAACAGCGGCAGCTACCGCCACAACAACAATCGCATCCGCAACAACAGCAACAACCGGTAATTCAAAATCCAACTCCAATTGCGACCAATCCGTATGGTACGGCGTACGGCACGAATCAACAGTATTCGATGTATCCGGCCCA GTACCAGCAACCGCCAGGCGCCGCTCAA A AATCGATTGCCGGTGTGGCCGACTATCTTCCTTCGCCCTACAGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATAC GAAACTACACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCG AACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGG                                                                                                                                                                                               ]
[+] EMBL BX619851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACGGCACG    AGGAGTATTCGATGTATCCGGCCCAGGTACCAGCAACCGCCAGGTGCCGCTCAAGAGAATCGATTGCCGCTGTGGCCGACTATCTTCCTTCGCCCTACAGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACGGAAACTCCACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCGCAACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCA                                                                                                                                  ]
[+] EMBL BX627205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGCCGACTATCTTCCTTCGCCCTACAGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATAC GAAACTCCACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCG AACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATG]




>consensus_8000#1
CCGGACGAGCTGTCCAGCGCGAGCGATGATAACGATGCGGATGGTGAGCGGCCCGCCCGA
GCTGCCCGAATGATCGCGAACGGGTCCGACGAAGACGACTACGAGGAGGAGAACGATGAA
TCTGCCCCGTCCGGGTCGTCGGACGAGCGCACCACCACCGCTCAAGCGAAACCGTTCGAC
CATATGAGCCAGCTAAGCTCGATACTGGTACCGACTGTGATACGGGACACAGTACCCAGT
GCTGTGGCCGCGCCCGCTGCTAACCCAAATGTACTCGCGAAAGCCACCAGCACCACTATC
ATTCCAAAGACCGAAATGGCCGCCTCGCCGAATGCCACATTTGGGAGCAACAACAACAAC
AATAATAATAATAACAATAATAATTATAATAAAATCAATTACTCGGACTTTGAGAACGAT
ACCTCGAGCCCGTTCGACAACATGGAGCTGCGTACGATCAACGATTTGGATATTTTGGCG
CAAGTGCTGAAGCAAAACACTACGCTTTCCAGCCCAGCGGAGTGAAGCGGTTCGGCCGGA
CACGGGCGAAACTCCGAAAGAGCAGGTGGAAGATACGAATCGGCAACCGGTGGCCAATGT
GCAGTCACCGGCTTTACCAGCCACGGAACAGCGGCAGCTACCGCCACAACAACAATCGCA
TCCGCAACAACAGCAACAACCGGTAATTCAAAATCCAACTCCAATTGCGACCAATCCGTA
TGGTACGGCGTACGGCACGAATCAACAGTATTCGATGTATCCGGCCCAGTACCAGCAACC
GCCAGGCGCCGCTCAAAAATCGATTGCCGGTGTGGCCGACTATCTTCCTTCGCCCTACAG
CACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACGAAACTCCACCGCTGGC
AGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCGAACTA
TGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGC
TTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGT
TACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTA
TGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGC
GCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTTC
CATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGG
CCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATG

consensusID : consensus_8000#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 585
fasta sequence

                              [CCGCCCACGCGTCCGGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACGAAACTACACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCGAACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATGACGACGTGCAGGATTCGGCGACGCGACGAACGCGGAACA]

[+] EMBL BM651978             [CCGCCCACGCGTCCGGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACGAAACTACACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCGAACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATGACGACGTGCAGGATTCGGCGACGCGACGAACGCGGAACA]




>consensus_8000#2
CCGCCCACGCGTCCGGCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACG
AAACTACACCGCTGGCAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGT
ACGGAATGTCGAACTATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCA
GTAGCAACCCGAGCGCTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGC
CGCACGCGTACGTCGTTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTG
GTGGCACGTCGACCTATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGA
CCGGTGGCTACTACGCGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAA
CAACAGCGTACTCTTCCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTC
CGGATGCAGTGGCGGGCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGC
TGGATGACGACGTGCAGGATTCGGCGACGCGACGAACGCGGAACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8000#1      CCGGACGAGCTGTCCAGCGCGAGCGATGATAACGATGCGGATGGTGAGCGGCCCGCCCGA 60
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ------------------------------------------------------------
                                                                                  

consensus_8000#1      GCTGCCCGAATGATCGCGAACGGGTCCGACGAAGACGACTACGAGGAGGAGAACGATGAA 120
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ------------------------------------------------------------
                                                                                  

consensus_8000#1      TCTGCCCCGTCCGGGTCGTCGGACGAGCGCACCACCACCGCTCAAGCGAAACCGTTCGAC 180
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ------------------------------------------------------------
                                                                                  

consensus_8000#1      CATATGAGCCAGCTAAGCTCGATACTGGTACCGACTGTGATACGGGACACAGTACCCAGT 240
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ------------------------------------------------------------
                                                                                  

consensus_8000#1      GCTGTGGCCGCGCCCGCTGCTAACCCAAATGTACTCGCGAAAGCCACCAGCACCACTATC 300
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ------------------------------------------------------------
                                                                                  

consensus_8000#1      ATTCCAAAGACCGAAATGGCCGCCTCGCCGAATGCCACATTTGGGAGCAACAACAACAAC 360
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ------------------------------------------------------------
                                                                                  

consensus_8000#1      AATAATAATAATAACAATAATAATTATAATAAAATCAATTACTCGGACTTTGAGAACGAT 420
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      --------------------------TTCGTTTGTAGAATA-TCGCATTCTGTTAAGTTC 33
                                                                                  

consensus_8000#1      ACCTCGAGCCCGTTCGACAACATGGAGCTGCGTACGATCAACGATTTGGATATTTTGGCG 480
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ACTT---ATCCACCCAAGGTTTTGG--CTGGATAGAAAGGAAGCTTTGCGCACTGCAACG 88
                                                                                  

consensus_8000#1      CAAGTGCTGAAGCAAAACACTACGCTTTCCAGCCCAGCGGAGTGAAGCGGTTCGGCCGGA 540
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      CTGTGGCCACTGATGCAGGTTCTTCTCGCTACAACAA-AAAATATGAAGGCCACGACGAC 147
                                                                                  

consensus_8000#1      CACGGGCGAAACTCCGAAAGAGCAGGTG-GAAGATACGAATCGGCAACCGGTGGCCAATG 599
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      CAGTGCTGGACGGTGTACAAAGGATGTATGATAATTTAATTTGCTTCTCGGTCGTGCTCG 207
                                                                                  

consensus_8000#1      TGCAGTCACCGGCTTTACCAGCCACGGAACAGCGGCAGCTACCGCCACAACAACAATCGC 659
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      CTCGGATGGAAGCACGGTAGAGCAGGGTAGGGTTTTGCGTGATTTTGGTGGGTGCGCCAC 267
                                                                                  

consensus_8000#1      ATCCGCAACAACAGCAACAACCGGTAATTCAAAATCCAACTCCAATTGCGACCAATCCGT 719
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      AGTGGCAGCAGCAGCAGCAGCAG---ACGCGATGTCCCAC----AGTCCGCCCAA-CTAC 319
                                                                                  

consensus_8000#1      ATGGTACGGCGTACGGCACGAATCAACAGTATTCGATGTATCCGGCCCAGTACCAGCAAC 779
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      ATGG-ACGGTGTTCCG-GTGAA-----AATATCGGAA-----CGGTTTA--------AAC 359
                                                                                  

consensus_8000#1      CGCCAGGCGCCGCTCAAAAATCGATTGCCGGTGTGGCCGACTATCTTCCTTCGCCCTACA 839
consensus_8000#2      --------------------------------------------CCGCCCACGCGTC-CG 15
consensus_8000#0      CGC----CGCCGAAGATAGTGCTGCCGCAGGGGTTGTCAACCGTCTGAAT--------CA 407
                                                                  *             * 

consensus_8000#1      GCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACGAAACTCCACCGCTGG 899
consensus_8000#2      GCACCACTTACCAGCAGCCGTACAGTAACTATAGCAACCAATACGAAACTACACCGCTGG 75
consensus_8000#0      ATACGATGT-CGGGCAGGTGCTGCATGACTCACGCTACGAGGGCGAA---------CTGG 457
                        ** *  * *  ****  *     * ***   ** ** *   ****         ****

consensus_8000#1      CAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCGAACT 959
consensus_8000#2      CAGCTTCCGGCTACTCAGCGGCAAACACCGTCGATACGAGTCGGTACGGAATGTCGAACT 135
consensus_8000#0      AGGACACGG--TACTTAAGCGCAT-CGCGG--AATGCAAAGCGGTGCGGGAGCGCGAACG 512
                        *   * *  **** *   ***  * * *   ** * *  **** *** *   ***** 

consensus_8000#1      ATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCG 1019
consensus_8000#2      ATGCGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCG 195
consensus_8000#0      CTACGAGCCCAACATACCATCATTCGGTTCCGGCCGTTAGCAGCAGTAGCAACCCGAGCG 572
                       * *********************************************************

consensus_8000#1      CTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCG 1079
consensus_8000#2      CTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCG 255
consensus_8000#0      CTTACACACCAACCGTCACCAACTACACGTACGGATATCAGCAGCCGCACGCGTACGTCG 632
                      ************************************************************

consensus_8000#1      TTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCT 1139
consensus_8000#2      TTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGCACGTCGACCT 315
consensus_8000#0      TTACTGCACCGTCCACTTCCATGGCGAGCGGCACCAGCGGTGGTGGTGGTACGTCGACCT 692
                      ************************************************* **********

consensus_8000#1      ATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACG 1199
consensus_8000#2      ATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACG 375
consensus_8000#0      ATGCGCCGAACTACGGTTACACCAGCACACCGGCGACGGGCACGACCGGTGGCTACTACG 752
                      ************************************************************

consensus_8000#1      CGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTT 1259
consensus_8000#2      CGCACTATCCTCACCAATCATCGGACGGTACGGCAGCTGCAGCAACAACAGCGTACTCTT 435
consensus_8000#0      CGCACTATCCTCACCAATCATCGGACGGTACGGCACCTGCAGCAACAACAGCGTACTCTT 812
                      *********************************** ************************

consensus_8000#1      CCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGG 1319
consensus_8000#2      CCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGG 495
consensus_8000#0      CCATCTATACTACCGCTGTCACCGCCGGCAGCTTTGCAGCTGGTCCGGATGCAGTGGCGG 872
                      ************************************************************

consensus_8000#1      GCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATG--------- 1370
consensus_8000#2      GCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATGACGACGTGC 555
consensus_8000#0      GCCTCAAATCGAAGTCTAGAAGCGTCCCGGACATTATGCGGCAGCTGGATGACGACGTGC 932
                      ***************************************************         

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      AGGATTCGGCGACGCGACGAACGCGGAACA------------------------------ 585
consensus_8000#0      AGGATTCGGCGACGCGACGAACGCGGAACAATAGTCAAACGATTGCCGATCGTCAGACTG 992
                                                                                  

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      CGCGCGAACAAGATGCTGTATCGAGCAATGCCGGGGAGCGAAGCGGCGTGGACTACACTA 1052
                                                                                  

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      TCTACAATCAGTAACGCAGCCGGATCAGAACACAGTGAAGCGCATCAGCTCCATGGGCTT 1112
                                                                                  

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      TCCACTCGAACGGGTAGTGTGGGTGCTAAAACGAATTGGAAACGATGATAAGAAGATAAT 1172
                                                                                  

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      CGAACATCTTATACCGCTGAGTGAGCTGCTGGATCTGGGGTTCGAGGGAGAGAAAATCTC 1232
                                                                                  

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      GGACGCACTGCTGAAGTTCGGCAACAATAAGCATAAAGCGCTTGATTATTTGATTTCGTA 1292
                                                                                  

consensus_8000#1      ------------------------------------------------------------
consensus_8000#2      ------------------------------------------------------------
consensus_8000#0      GGAGTGTTTTTCCTGTGCCCGCGGGATCGGCTTGTTGGTGAAATGGGTGATTCGGGTGAA 1352
                                                                                  

consensus_8000#1      -----------------------
consensus_8000#2      -----------------------
consensus_8000#0      CTTTGCGGAGAGAAAACTTAAAG 1375