cluster # 803

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Anopheles gambiae
cluster # 803 cluster # 803 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_803#0 length = 550 sequences # 1

consensus_803#1 length = 210 sequences # 1

consensusID : consensus_803#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 550
fasta sequence

                              [CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACACGATGAAATAATAGAAAGTGGCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGATGAACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGTGTTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAACTATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTTGTCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACTAGTTTATTACT]

[+] EMBL BM575304             [CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACACGATGAAATAATAGAAAGTGGCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGATGAACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGTGTTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAACTATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTTGTCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACTAGTTTATTACT]




>consensus_803#0
CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACAC
GATGAAATAATAGAAAGTGGCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTAT
TTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTG
AAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTA
AAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGATG
AACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGTG
TTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAACT
ATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTTG
TCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACTA
GTTTATTACT

consensusID : consensus_803#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 210
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACA]

[+] EMBL BM614579             [CCGCGGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTATTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTTAAAGTTATTATGATGAAAATGAAACA]




>consensus_803#1
CCGCGGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTA
TTTATTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAG
GTTTGAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAA
ATTTAAAGTTATTATGATGAAAATGAAACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_803#0      CCGATTCAAAAGTGAGTTAGAAAATTCTTTAAGATTGATGTGGATAAACATGTTGCACAC 60
consensus_803#1      --------------------------------------------------------CCGC 4
                                                                              * *

consensus_803#0      GATGAAATAATAGAAAGTG-GCTTGAAAACCCTGTAATTTTTATTATATTTATTTATTTA 119
consensus_803#1      GGACGCGTGGGCGGACGCGTGGGTGAAAACCCTGTAATTTTTATTATATTTATTTATTTA 64
                     *      *    * * * * *  *************************************

consensus_803#0      TTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTT 179
consensus_803#1      TTTAATATTTTATTTTCAACGCTTCAATGGGCTGCTGTCTTCGTTTTTTCACCAAGGTTT 124
                     ************************************************************

consensus_803#0      GAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTT 239
consensus_803#1      GAAGCCGGGTCGGATCGACCGTTGACAGTTTGAGTGTTGAAAATCATGCTGAAGAAATTT 184
                     ************************************************************

consensus_803#0      AAAGTTATTATGATGAAAATGAAACATCAGAATGATGTGGAATAACTTCTTGCACGCGAT 299
consensus_803#1      AAAGTTATTATGATGAAAATGAAACA---------------------------------- 210
                     **************************                                  

consensus_803#0      GAACAACAACATTTGCATTCGAAAGTGACTTAAAGAACTCTGTAATGAAATCGACGGAGT 359
consensus_803#1      ------------------------------------------------------------
                                                                                 

consensus_803#0      GTTTCAAAAATATACGACCAATGAATCGGGAGACGACATTTTGGAAAACAACCAAAAAAC 419
consensus_803#1      ------------------------------------------------------------
                                                                                 

consensus_803#0      TATAAGTAGCTCTGTAACACAGTTTGTTTGATTATTTTGCAGTTTATTTTAAGTTCCCTT 479
consensus_803#1      ------------------------------------------------------------
                                                                                 

consensus_803#0      GTCTCTTTACAAACAGTATTAAAAGGGTATTTTCGAGCAATATACTTCTAATTCAAAACT 539
consensus_803#1      ------------------------------------------------------------
                                                                                 

consensus_803#0      AGTTTATTACT 550
consensus_803#1      -----------