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Anopheles gambiae
cluster # 8041 cluster # 8041       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8041#0 length = 1484 sequences # 6  
consensus_8041#1 length = 728 sequences # 1  
consensus_8041#2 length = 501 sequences # 1  
consensus_8041#3 length = 91 sequences # 1  

consensusID : consensus_8041#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1484
fasta sequence
                              [TGAGCTGCTGGAGAATGTGCGCGTCGATCTGGAGCTGCCGGAAGGGTTCGTGTCGCGTGCCGTCATACCGTGTGCGAAGTGCCGTACGGTGACAAAGAATCGACCTACGTTATCGTTCAATTCCCCGAAGACGTGCCCAGCTCGATCGCCACACTGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAAT-GGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAACCACACACACCCACACACATACATGCGAGACATACGACAGCCTCTAGACAGTCTGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCCCTTTTCCAACACGTGTGGGGCTTTTAC-GGGGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATTACTTCATTCCGTGCATTATAATATCCCAAAACGCGTGAGCCTTCGCGCATGAAACTAGCAGCAAACG-AAACACAAACAAGCAAGGAAACAAAAGTGTGGAATATATTTTTAACGTACGTTACATCTAGCGACATAAACGAAGCAGGCATTGAAGTGGTGCGCGATGCAGGAAGCGTGTGTTATCGTACGAATTTCGTTACGTCATTTTTTTTTTAAAGAAACTGAATAGCAAACGCTTGCTTCAAGCATCCCTTTCTCGAACCACATCCACGCATCGAGAACAGTTATTTTTTTATCCGGCACTTTTGCTTTCAACAAACAACACCAAAACGAAAGAGAGCGGCACGGAGGCATCGTGAACATACATATATTTTGTGAACAAAGTGCTTTGTTTGTTAAGGCGCATTTGCCGCGGCCGGGTTGGATCTGGAGCTCACTTACACTTAAGCTGGTCCATTCGGCCGGATCATACACCTTAGCTCTCCTCCGTTTCGCACCATCTCCCATTGTCCCGGGCCAGCAATTTCCACGGCTTTCTTTTTTTTCTTCCCGCAAAAGGGGCGCACGTGTATGTGAATATGTATTAATTAGAATAATCTGA-GAAACCCAACAACGAGGACAAATA]

[+] EMBL CNS08K3W             [TGAGCTGCTGGAGAATGTGCGCGTCGATCTGGAGCTGCCGGAAGGGTTCGTGTCGCGTGCCGTCATACCGTGTGCGAAGTGCCGTACGGTGACAAAGAATCGACCTACGTTATCGTTCAATTCCCCGAAGACGTGCCCAGCTCGATCGCCACACTGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAAT GGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAACCACACACACCCACACACATACATGCGAGACATACGACAGCCTCTAGACAGTCTGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCCCTTTTCCAACACGTGTGGGGCTTTTACGGGGGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08U1K             [           AGAATGTGCGCGTCGATCTGGAGCTGCCGGAAGGGTTCGTGTCGCGTGCCGTCATACCGTGTGCGACGTGCCGTACGGTGACAAAGAATCGACCTACGTTATCGTTCAATTCCCCGAAGACGTGCCCAGCTCGATCGCCACACTGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAAT GGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAACCACACACACCCACACACATACATGCGAGACATACGACAGCCTCTAGACAGTCTGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCCCTTTTCCAACACGTGTGGGGCTTTTAC GGGGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATTACTTCATTCCGTGCATTATAATATCCCAAAACGCGTGACCCTTCGCGCATGAAACTAGCAGCAAACG AAACACAAACAAGCAAGGAAACAAAAGTGTGGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM634484             [                                                                                                                                                                                                                                    ccgGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAAT GGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAACCACACACACCCACACACATACATGCGAGACATACGACAGCCTCTAGACAGTCTGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCCCTTTTCCAACACGTGTGGGGCTTTTAC GGGGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATTACTTCATTCCGTGCATTATAATATCCCAAAACGCGTGAGCCTTCGCGCATGAAACTAGCAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM610952             [                                                                                                                                                                                                                                                                                                                                     ccgCGGACGCGTGGGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAACCACACACACCCACACACATACATGCGAGACATACGACAGCCTCTAGACAGTCTGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCCCTTTTCCAACACGTGTGGGGCTTTTAC GGGGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATTACTTCATTCCGTGCATTATAATATCCCAAAACGCGTGAGCCTTCGCGCATGAAACTAGCAGCAAACGAAAACACCAACAAGCAAGGAAACCAAAGTGTGGAATATATTTTTAACGTACGTTACATCTAGCGACATAAACGAAGCAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08U1L             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCGGAACTAATTACATCCGCAGTAGGCTAAGCAAACAACACACACCCACAAACAAACATGCGAGACATACGACAGCCTCTAGACAGTATGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCCCTTTTCCAACACGTGTGGGGCTTTTAC GGGGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATTACTTCATTCCGTGCATTATAATATCCCAAAACGCGTGAGCCTTCGCGCATGAAACTAGCAGCAAACG AAACACAAACAAGCAAGGAAACAAAAGTGTGGAATATATTTTTAACGTACGTT CATCTAGCGACATAAACGAAGCAGGCATTGAAGTGGTGCGCGATGCAGGAAGCGTGTGTTATCGTACGAATTTCGTTACGTCATTTTTTTTTTAAAGAAACTGAATAGCAAACGCTTGCTTCAAGCATCCCTTTCTCGAACCACATCCACGCATCGAGAACAGTTATTTTTTTATCCGGCACTTTTGCTTTCAACAAACAACACCAAAACGAAAGAGAGCGGCACGGAGGCATCGTGAACATACATATATTTTGTGAACAAAGTGCTTTGTTTGTTAAGGCGCATTTGCCGCGGCCGGGTTGGATCTGGAGCTCACTTACACTTAAGCTGGTCCATTCGGCCGGATCATACACCTTAGCTCTCCTCCGTTTCGCACCATCTCCCATTGTCCCGGGCCAGCAATTTCCACGGCTTTCTTTTTTTTCTTCCCGCAAAAGGGGCGCACGTGTATGTGAATATGTATTAATTAGAATAATCTGA GAAACCCA                ]
[-] EMBL CNS08K3X             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGAAACAAAAGTGTGGAATATATTTTTAACGTACGTTACATCTAGCGACATAAACGAAGCAGGCATTGAAGTGGTGCGCGATGCCGGAAGCGTGTGTTATCGTACGAATTTCGTTACGTCATTTTTTTTTTAAAGAAACTGAATAGCAAACGCTTGCTTCAAGCATCCCTTTCTCGAACCACATCCACGCATCGAGAACAGTTATTTTTTTATCCGGCACTTTTGCTTTCAACAAACAACACCAAAACGAAAGAGAGCGGCACGGAGGCATCGTGAACATACATATATTTTGTGAACAAAGTGCTTTGTTTGTTAAGGCGCATTTGCCGCGGCCGGGTTGGATCTGGAGCTCACTTACACTTAAGCTGGTCCATTCGGCCGGATCATACACCTTAGCTCTCCTCCGTTTCGCACCATCTCCCATTGTCCCGGGCCAGCAATTTCCACGGCTTTCTTTTTTTTCTTCCCGCAAAAGGGGCGCACGTGTATGTGAATATGTATTAATTAGAATAATCTGAGGAAACCCAACAACGAGGACAAATA]


>consensus_8041#0 TGAGCTGCTGGAGAATGTGCGCGTCGATCTGGAGCTGCCGGAAGGGTTCGTGTCGCGTGC CGTCATACCGTGTGCGAAGTGCCGTACGGTGACAAAGAATCGACCTACGTTATCGTTCAA TTCCCCGAAGACGTGCCCAGCTCGATCGCCACACTGGGTGCCACATTACGCTTTTTGGTA AAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTAC ATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAAC TTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAATGGGTCGAAGCGGAAGACACGTTC GAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGC CTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTC TGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCT GACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATT ACATCCGCAGTAGGCTAAGCAAACCACACACACCCACACACATACATGCGAGACATACGA CAGCCTCTAGACAGTCTGACACGATACAGAACCCCCCCTCTCCACAGGGCCCCCCACCCC CTTTTCCAACACGTGTGGGGCTTTTACGGGGGGGGTCATTAGACATTAAACGGTTGTAGA AAACGCGCACGAAAAGAAAAGGGACACGCATTTCGTCCCACGTGCTCTGTGTTGTTGCCG GCTGTCGACGGCTCTTATTACTTCATTCCGTGCATTATAATATCCCAAAACGCGTGAGCC TTCGCGCATGAAACTAGCAGCAAACGAAACACAAACAAGCAAGGAAACAAAAGTGTGGAA TATATTTTTAACGTACGTTACATCTAGCGACATAAACGAAGCAGGCATTGAAGTGGTGCG CGATGCAGGAAGCGTGTGTTATCGTACGAATTTCGTTACGTCATTTTTTTTTTAAAGAAA CTGAATAGCAAACGCTTGCTTCAAGCATCCCTTTCTCGAACCACATCCACGCATCGAGAA CAGTTATTTTTTTATCCGGCACTTTTGCTTTCAACAAACAACACCAAAACGAAAGAGAGC GGCACGGAGGCATCGTGAACATACATATATTTTGTGAACAAAGTGCTTTGTTTGTTAAGG CGCATTTGCCGCGGCCGGGTTGGATCTGGAGCTCACTTACACTTAAGCTGGTCCATTCGG CCGGATCATACACCTTAGCTCTCCTCCGTTTCGCACCATCTCCCATTGTCCCGGGCCAGC AATTTCCACGGCTTTCTTTTTTTTCTTCCCGCAAAAGGGGCGCACGTGTATGTGAATATG TATTAATTAGAATAATCTGAGAAACCCAACAACGAGGACAAATA



consensusID : consensus_8041#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence
                              [GAATCGGCACGAGGTGCGAAGACGTGCCCAGCTCGATCGCCACACTGGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGTCTCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGAGTACGGAGGAATGGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCGTCTGGCACGTTCCGTGGGTGGTGTTGGAGGTGCTCGTACCGNTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAAGCAGACAGAGNCCAGACNAGCATACATGCGAGACATACAGACAGNCTCTAGGACCANGGTCTGACACGAATACAGAACAACACCAGGTACTCACAAGAGGGGGCCCNCCAGACCCGCGTTTGCAAGCACGTGTAGGGGGGCTATATAACGGGGGCGGGGGTCCAGTTACGNACAGTTGAAAACGGGTCGGCAGGAANAGACCGCGC]

[+] EMBL BX469162             [GAATCGGCACGAGGTGCGAAGACGTGCCCAGCTCGATCGCCACACTGGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGTCTCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGAGTACGGAGGAATGGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCGTCTGGCACGTTCCGTGGGTGGTGTTGGAGGTGCTCGTACCGNTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAAGCAGACAGAGNCCAGACNAGCATACATGCGAGACATACAGACAGNCTCTAGGACCANGGTCTGACACGAATACAGAACAACACCAGGTACTCACAAGAGGGGGCCCNCCAGACCCGCGTTTGCAAGCACGTGTAGGGGGGCTATATAACGGGGGCGGGGGTCCAGTTACGNACAGTTGAAAACGGGTCGGCAGGAANAGACCGCGC]


>consensus_8041#1 GAATCGGCACGAGGTGCGAAGACGTGCCCAGCTCGATCGCCACACTGGGGTGCCACATTA CGCTTTTTGGTAAAGGATTGCGTCTCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTA CAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATC CAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGAGTACGGAGGAATGGGTCGAAG CGGAAGACACGTTCGAGCTGTCGTCGGGTGACCAGTTTGCAGGATGCCGTCAACACGATC CTTAAATTCCTTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCAT ACCCATACGTTACTCTGCGTCTGGCACGTTCCGTGGGTGGTGTTGGAGGTGCTCGTACCG NTCCAAGCTGGCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATAT GGACGTGGCGGAACTAATTACATCCGCAGTAGGCTAAGCAAAGCAGACAGAGNCCAGACN AGCATACATGCGAGACATACAGACAGNCTCTAGGACCANGGTCTGACACGAATACAGAAC AACACCAGGTACTCACAAGAGGGGGCCCNCCAGACCCGCGTTTGCAAGCACGTGTAGGGG GGCTATATAACGGGGGCGGGGGTCCAGTTACGNACAGTTGAAAACGGGTCGGCAGGAANA GACCGCGC



consensusID : consensus_8041#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 501
fasta sequence
                              [GAATCGCCCGAGNNCTGCGTCATACGTGTGCGAAGCTGCCGTACGGTGACAAGAATCGACCTACGTTATCGTTCAATTCCCCNAAGATGTGCCCAGCTCGATCGCCACACTGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAATGGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTACGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGT]

[+] EMBL AL933781             [GAATCGCCCGAGNNCTGCGTCATACGTGTGCGAAGCTGCCGTACGGTGACAAGAATCGACCTACGTTATCGTTCAATTCCCCNAAGATGTGCCCAGCTCGATCGCCACACTGGGTGCCACATTACGCTTTTTGGTAAAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAATGGGTCGAAGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCCTTGGCCTACGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCCAAGCTGGCTGTGGCTGACGGT]


>consensus_8041#2 GAATCGCCCGAGNNCTGCGTCATACGTGTGCGAAGCTGCCGTACGGTGACAAGAATCGAC CTACGTTATCGTTCAATTCCCCNAAGATGTGCCCAGCTCGATCGCCACACTGGGTGCCAC ATTACGCTTTTTGGTAAAGGATTGCGATCCGGCCACCGGTCAGCCCGATTCGGACGAAGG CTACAACGATGAGTACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAA ATCCAAGAAGCAAAACTTCCTCGCCGCGTGGGAAAGTGCCGATACGGAGGAATGGGTCGA AGCGGAAGACACGTTCGAGCTGTCGTCGGTGACCAGTTTGCAGGATGCCGTCAACACGAT CCTTAAATTCCTTGGCCTACGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCAT ACCCATACGTTACTCTGCTCTGGCACGTTCCGTGGTGGTGTTGAGGTGCTCGTCCGCTCC AAGCTGGCTGTGGCTGACGGT



consensusID : consensus_8041#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 91
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAATCATATCCACACATCTAGAACAGTTATTTTTTTATCCGGCACTTTTGCTTTCAACAAACAAC]

[+] EMBL BM590151             [CCGCCCACGCGTCCGCCCACGCGTCCGAATCATATCCACACATCTAGAACAGTTATTTTTTTATCCGGCACTTTTGCTTTCAACAAACAAC]


>consensus_8041#3 CCGCCCACGCGTCCGCCCACGCGTCCGAATCATATCCACACATCTAGAACAGTTATTTTT TTATCCGGCACTTTTGCTTTCAACAAACAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      -------------------------------------------GAATCGCCCGAGNNCTG 17
consensus_8041#0      TGAGCTGCTGGAGAATGTGCGCGTCGATCTGGAGCTGCCGGAAGGGTTCGTGTCGCGTGC 60
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      -------------------------------------------------GAATCGGCACG 11
consensus_8041#2      CGTCATACGTGTGCGAAGCTGCCGTACGGTGACAA-GAATCGACCTACGTTATCGTTCAA 76
consensus_8041#0      CGTCATACCGTGTGCGAAGTGCCGTACGGTGACAAAGAATCGACCTACGTTATCGTTCAA 120
consensus_8041#3      ----------------------------------------------------CCGCCCAC 8
                                                                           **     

consensus_8041#1      AGGTGCGAAGACGTGCCCAGCTCG-ATCGCCACACTGGGGTGCCACATTACGCTTTTTGG 70
consensus_8041#2      TTCCCCNAAGATGTGCCCAGCTCG-ATCGCCACACTGGG-TGCCACATTACGCTTTTTGG 134
consensus_8041#0      TTCCCCGAAGACGTGCCCAGCTCG-ATCGCCACACTGGG-TGCCACATTACGCTTTTTGG 178
consensus_8041#3      GCGTCCGCCCACGCGTCCGAATCATATCCACACATCTAG----AACAGTTATTTTTTTAT 64
                           *    * * * **   **  ***  ****    *     *** *    *****  

consensus_8041#1      TAAAGGATTGCGTCTCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAG 130
consensus_8041#2      TAAAGGATTGCGA-TCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAG 193
consensus_8041#0      TAAAGGATTGCGA-TCCGGCCACCGGTCAGCCCGATTCGGACGAAGGCTACAACGATGAG 237
consensus_8041#3      CCGGCACTTTTGCTTTCAACAAACAAC--------------------------------- 91
                             **  *  * *  * * *                                    

consensus_8041#1      TACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAA 190
consensus_8041#2      TACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAA 253
consensus_8041#0      TACATACTGGAGGACATTGAGGTCACCGTGGCGGATCAGATGCAGAAATCCAAGAAGCAA 297
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      AACTTCCTCGCCGCGTGGGAAAGTGCCGAGTACGGAGGAATGGGTCGAAGCGGAAGACAC 250
consensus_8041#2      AACTTCCTCGCCGCGTGGGAAAGTGCCGA-TACGGAGGAATGGGTCGAAGCGGAAGACAC 312
consensus_8041#0      AACTTCCTCGCCGCGTGGGAAAGTGCCGA-TACGGAGGAATGGGTCGAAGCGGAAGACAC 356
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      GTTCGAGCTGTCGTCGGGTGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCC 310
consensus_8041#2      GTTCGAGCTGTCGTCGG-TGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCC 371
consensus_8041#0      GTTCGAGCTGTCGTCGG-TGACCAGTTTGCAGGATGCCGTCAACACGATCCTTAAATTCC 415
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      TTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGT 370
consensus_8041#2      TTGGCCTA-CGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGT 430
consensus_8041#0      TTGGCCTAGCGCCGGCGAACCTGTCCGAGAACGTGCCGGATGGTGCTCATACCCATACGT 475
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      TACTCTGCGTCTGGCACGTTCCGTGGGTGGTGTTGGAGGTGCTCGTACCGNTCCAAGCTG 430
consensus_8041#2      TACTCTGC-TCTGGCACGTTCCGTGG-TGGTGTTG-AGGTGCTCGT-CCGCTCCAAGCTG 486
consensus_8041#0      TACTCTGC-TCTGGCACGTTCCGTGG-TGGTGTTG-AGGTGCTCGT-CCGCTCCAAGCTG 531
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      GCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCG 490
consensus_8041#2      GCTGTGGCTGACGGT--------------------------------------------- 501
consensus_8041#0      GCTGTGGCTGACGGTGTCACAATGCAGCTGACAGTTCGGTCGACGGATATGGACGTGGCG 591
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      GAACTAATTACATCCGCAGTAGGCTAAGCAAAGCAGACAGAGNCCAGACNAGCATACATG 550
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      GAACTAATTACATCCGCAGTAGGCTAAGCAAACCACACACACCC---ACACACATACATG 648
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      CGAGACATACAGACAGNCTCTAGGACCANGGTCTGACACGAATACAGAACAACACCAGGT 610
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      CGAGACATAC-GACAGCCTCTAG----ACAGTCTGACACGA-TACAGAACCCCCCC---T 699
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ACTCACAAGAGGGGGCCCNCCAGACCCGCGTTTGCAAGCACGTGTAGGGGGGCTATATAA 670
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      CTCCACA-----GGGCCCCCCACCCCC---TTTTCCAACACGTGT--GGGGCTTTTACGG 749
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      CGGGGGCGGGGGTCCAGTTACGNACAGTTGAAAACGGGTCGGCAGGAANAGACCGCGC-- 728
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      GGGGGGTCATTAGACATTAAACGGTTGTAGAAAACGCGCACGAAAAGAAAAGGGACACGC 809
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      ATTTCGTCCCACGTGCTCTGTGTTGTTGCCGGCTGTCGACGGCTCTTATTACTTCATTCC 869
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      GTGCATTATAATATCCCAAAACGCGTGAGCCTTCGCGCATGAAACTAGCAGCAAACGAAA 929
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      CACAAACAAGCAAGGAAACAAAAGTGTGGAATATATTTTTAACGTACGTTACATCTAGCG 989
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      ACATAAACGAAGCAGGCATTGAAGTGGTGCGCGATGCAGGAAGCGTGTGTTATCGTACGA 1049
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      ATTTCGTTACGTCATTTTTTTTTTAAAGAAACTGAATAGCAAACGCTTGCTTCAAGCATC 1109
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      CCTTTCTCGAACCACATCCACGCATCGAGAACAGTTATTTTTTTATCCGGCACTTTTGCT 1169
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      TTCAACAAACAACACCAAAACGAAAGAGAGCGGCACGGAGGCATCGTGAACATACATATA 1229
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      TTTTGTGAACAAAGTGCTTTGTTTGTTAAGGCGCATTTGCCGCGGCCGGGTTGGATCTGG 1289
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      AGCTCACTTACACTTAAGCTGGTCCATTCGGCCGGATCATACACCTTAGCTCTCCTCCGT 1349
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      TTCGCACCATCTCCCATTGTCCCGGGCCAGCAATTTCCACGGCTTTCTTTTTTTTCTTCC 1409
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ------------------------------------------------------------
consensus_8041#2      ------------------------------------------------------------
consensus_8041#0      CGCAAAAGGGGCGCACGTGTATGTGAATATGTATTAATTAGAATAATCTGAGAAACCCAA 1469
consensus_8041#3      ------------------------------------------------------------
                                                                                  

consensus_8041#1      ---------------
consensus_8041#2      ---------------
consensus_8041#0      CAACGAGGACAAATA 1484
consensus_8041#3      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)