cluster # 8053

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Anopheles gambiae
cluster # 8053 cluster # 8053 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8053#0 length = 1242 sequences # 5

consensus_8053#1 length = 958 sequences # 3
consensus_8053#2 length = 693 sequences # 1

consensusID : consensus_8053#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1242
fasta sequence

                              [ATCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCAGCATCATCAACGTCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTGTACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGTCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCAGCCCGC-GGATGATCAACATCCTCAAGCTGATCCTTTGGGCGCAAACCGAGCTGGACAAGAAGAATGTAAAGTACCCGAAGATGATGGGTTTTGCTTCCGCCACGATCGAACCGAAGTGAACCGAATATGTGTGTGTGTGTGTGTGT--GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAAGTCGAACGTGATATTTTGGGCGAGCGATGGGCGCGATTGTGAGTTTGTANGAGCATGGNCGATTTGCCAGCCCAACTAACAGCTGAAAAAGTAATGGTGACGCGATTTTTAG]

[+] EMBL CNS08E59             [ATCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCAGCATCATCAACGTCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTGTACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGTCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATTCTTTTGATGGAGCAGCAGGAACAGTCCAGCCCGC GGATGAACAACATCCTCAAGCTGATCCTTTGGGCGCAAACCGAG                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08WVK             [ TCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGA CCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTGTACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAA CAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGTCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCAGCCCGCGGGATGATCAACA                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX613587             [                                                                                                                                                                                                                                                                                                                                                           TACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGCCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCAGCCCGC GGATGATCAACATCCTCAAGCTGATCCTTTGGGCGCAAACCGAGCTGGACAAG                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08WVL             [                                                                                                                                                                                                                                                                                                                                                                                                                      GAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAAAAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCAACGTCACACCGTCGGTCGATCTCTACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTTATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGGGCTGCTGGACAACGATCGCTATCTGTACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGGGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGGGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGAACAGTCCGTTCGCGGACCTGTTCGGCAACTCCCCCCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCAGCCCGC GGATGATCAACATCCTCAAGCTGATCCTTTGGGCGCAAACCGAGCTGGACAAGAAGAATGTAAAGTACCCGAAGATGATGGGTTTTGCTTCCGCCACGATCGAACCGAAGTGAACCGAATATGTGTGTGTGTGTGTGTGT  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT                                                                                                                     ]
[+] EMBL BX626988             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGCCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCAGCCCGC GGATGATCAACATCCTCAAGCTGATCCTTTGGGCGCAAACCGAGCTGGACAAGAAGAATGTAAAGTACCCGAAGATGATGGATCTGGCTTCCGCCACGATCGAACCGAAGTGAGCCGCATATGTGTGAGTGGGTGTGTGTACGTGTGTGTACCTGTGTGTGTGTGTGTGTGAGTGGGTGCTTCTGCGTGTATGTAGAAAGTCGAACGTGATATTTTGGGCGAGCGATGGGCGCGATTGTGAGTTTGTANGAGCATGGNCGATTTGCCAGCCCAACTAACAGCTGAAAAAGTAATGGTGACGCGATTTTTAG]




>consensus_8053#0
ATCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTCGCGCCAGAGTCA
AACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTT
TATTGCGTGAAATCCCAGCATCATCAACGTCACTCCCGCCGTACCCCTCGCTGGAAAACT
CTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAA
CAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACG
TAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGA
TGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAA
CTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGG
GTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATC
TCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGG
AGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTGT
ACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAG
CGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGA
ACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGTCCGTTCG
CGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCC
TGAAGATGGAGCAGCAGGAACAGTCCAGCCCGCGGATGATCAACATCCTCAAGCTGATCC
TTTGGGCGCAAACCGAGCTGGACAAGAAGAATGTAAAGTACCCGAAGATGATGGGTTTTG
CTTCCGCCACGATCGAACCGAAGTGAACCGAATATGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAAAGTCGAACGTG
ATATTTTGGGCGAGCGATGGGCGCGATTGTGAGTTTGTANGAGCATGGNCGATTTGCCAG
CCCAACTAACAGCTGAAAAAGTAATGGTGACGCGATTTTTAG

consensusID : consensus_8053#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 958
fasta sequence

                              [CCGAAAACAAATCGTGCGATCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCG--AAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCG-TTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAG-GGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGCCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCA]

[+] EMBL BM584806             [CCGAAAACAAATCGTGCGATCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX603563             [                                                                                                                                                                                                                                               GCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCCACGGTTGAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCG  AAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCG TTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAG GGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAAACGCCGCAGCACAGCCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCA]
[+] EMBL AL932902             [                                                                                                                                                                                                                                                                                                                                                                                           cCCAGGGTTAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGCTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGCGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCA                                                                                                                                                                                         ]




>consensus_8053#1
CCGAAAACAAATCGTGCGATCGAACGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCT
CACTTCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGC
GACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGC
CGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAG
CCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACT
CCATATTCCACGGTTGAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGCAAACC
CCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATC
TCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAAC
AAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAA
GCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATC
CGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCAC
CCGGAGCTGCTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATC
GAGCTGATCCGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCC
GAAGCGGGCGAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTC
GCGTTCGAAACGCCGCAGCACAGCCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAG
AAGGTGGCGAGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCA

consensusID : consensus_8053#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 693
fasta sequence

                              [CCGCGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTGTAAGCCAAGTGTTCCTTCCTCGATCGATGAACAGCAGCAGCAACGCATCTTAACGCGCTACTATCTTTCAGCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATC]

[+] EMBL BM616726             [CCGCGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTGTAAGCCAAGTGTTCCTTCCTCGATCGATGAACAGCAGCAGCAACGCATCTTAACGCGCTACTATCTTTCAGCGCGCCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCTGCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCTCGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGCTCACGCTCCAAACAACACGCCAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTGCTGGACAACGATCGCTATC]




>consensus_8053#2
CCGCGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTGTAAGCCAAGTGTTCC
TTCCTCGATCGATGAACAGCAGCAGCAACGCATCTTAACGCGCTACTATCTTTCAGCGCG
CCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCT
GCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCT
CGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGC
TCACGCTCCAAACAACACGCCAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGC
AAACCCCCTGCGTAACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACG
GCATCTCGAAGGAGGAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACA
TCAACAAGCTGATCATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGT
TCCAAGCCGAGTCCGGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATAC
AGATCCGGGAGGCGGTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGC
TGCACCCGGAGCTGCTGGACAACGATCGCTATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8053#0      ------------------------------------------------------------
consensus_8053#1      -------------------------------------------------CCGAAAACAAA 11
consensus_8053#2      CCGCGTAATTAACAACAAAGCGCTTCCGAGTTGTTTTCTCACTTGTAAGCCAAGTGTTCC 60
                                                                                  

consensus_8053#0      -------ATCGAACGTAATTAACAACAAAGCGCTTC--CGAGTTGTTTTCTCACTTCGCG 51
consensus_8053#1      TCGTGCGATCGAACGTAATTAACAACAAAGCGCTTC--CGAGTTGTTTTCTCACTTCGCG 69
consensus_8053#2      TTCCTCGATCGATGAACAGCAGCAGCAACGCATCTTAACGCGCTACTATCTTTCAGCGCG 120
                             *****     *  * ** *** **   *   ** * *  * ***  *  ****

consensus_8053#0      CCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCT 111
consensus_8053#1      CCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCT 129
consensus_8053#2      CCAGAGTCAAACGGACGTCCCCGAAGTGGTAAAAACGGGCATCTTGTCTGCGACGCAGCT 180
                      ************************************************************

consensus_8053#0      GCAGCTCTTTATTGCGTGAAATCCCAGCATCATCAACGTCAC---TCCCGCCGTACCCCT 168
consensus_8053#1      GCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCT 189
consensus_8053#2      GCAGCTCTTTATTGCGTGAAATCCCACCATCATCAACGTCACCACTCCCGCCGTACCCCT 240
                      ************************** ***************   ***************

consensus_8053#0      CGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGC 228
consensus_8053#1      CGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGC 249
consensus_8053#2      CGCTGGAAAACTCTACCGTCTCACAGTGGGAGGGGGTTAAAAGAAAAACAGCCTTGTTGC 300
                      ************************************************************

consensus_8053#0      TCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCC 288
consensus_8053#1      TCACGCTCCAAACAACACGCCAAACGGTGCAAAGAGAAACTTTCCACAACTCCATATTCC 309
consensus_8053#2      TCACGCTCCAAACAACACGCCAAACGGTGGACACAG------------------------ 336
                      ***************************** * * **                        

consensus_8053#0      ACGGTTGAAACG----------TAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTA 338
consensus_8053#1      ACGGTTGAAACGGTGGACACAGTAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTA 369
consensus_8053#2      ----------------------TAAGTGCCGTCGTTTAGCGAAAGCAAACCCCCTGCGTA 374
                                            **************************************

consensus_8053#0      ACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAG 398
consensus_8053#1      ACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAG 429
consensus_8053#2      ACGAGCTCCTACCAGCGAAAGATGAGCTGCAACGATAAGAACGACGGCATCTCGAAGGAG 434
                      ************************************************************

consensus_8053#0      GAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATC 458
consensus_8053#1      GAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATC 489
consensus_8053#2      GAATGGCAGAGCCGTCTCGAAACTTTTCCGTTCAAGCAGGACGACATCAACAAGCTGATC 494
                      ************************************************************

consensus_8053#0      ATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCC 518
consensus_8053#1      ATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCC 549
consensus_8053#2      ATGAACTACCTGGTCACGGAGGGTTTTAAGGAGGCGGCGGAAAAGTTCCAAGCCGAGTCC 554
                      ************************************************************

consensus_8053#0      GGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCG 578
consensus_8053#1      GGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCG 609
consensus_8053#2      GGCGTCACACCGTCGGTCGATCTCAACTCGCTCGACAACAGGATACAGATCCGGGAGGCG 614
                      ************************************************************

consensus_8053#0      GTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTG 638
consensus_8053#1      GTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTG 669
consensus_8053#2      GTCCAGAACGGTTTCATTCAGGAGGCGACGCATCTCGTCAACCAGCTGCACCCGGAGCTG 674
                      ************************************************************

consensus_8053#0      CTGGACAACGATCGCTATCTGTACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATC 698
consensus_8053#1      CTGGACAACGATCGCTATCTATACTTTCACCTGCAGCAACTGCACCTTATCGAGCTGATC 729
consensus_8053#2      CTGGACAACGATCGCTATC----------------------------------------- 693
                      *******************                                         

consensus_8053#0      CGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGC 758
consensus_8053#1      CGTGCGGGCAAGATCGAGGAAGCGCTCACCTTTGCCCAGACGCAAATTTCCGAAGCGGGC 789
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      GAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAA 818
consensus_8053#1      GAAAGCAACCCGGAGGTACTGAACGAACTCGAGCGCACGCTGGCCCTGCTCGCGTTCGAA 849
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      ACGCCGCAGCACAGTCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCG 878
consensus_8053#1      ACGCCGCAGCACAGCCCGTTCGCGGACCTGCTCGGCCACTCCCACCGGCAGAAGGTGGCG 909
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      AGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCAGCCCGCGGATG 938
consensus_8053#1      AGCGAGCTCAACGCGGCCATCCTGAAGATGGAGCAGCAGGAACAGTCCA----------- 958
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      ATCAACATCCTCAAGCTGATCCTTTGGGCGCAAACCGAGCTGGACAAGAAGAATGTAAAG 998
consensus_8053#1      ------------------------------------------------------------
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      TACCCGAAGATGATGGGTTTTGCTTCCGCCACGATCGAACCGAAGTGAACCGAATATGTG 1058
consensus_8053#1      ------------------------------------------------------------
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 1118
consensus_8053#1      ------------------------------------------------------------
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      TGTGTGTAGAAAGTCGAACGTGATATTTTGGGCGAGCGATGGGCGCGATTGTGAGTTTGT 1178
consensus_8053#1      ------------------------------------------------------------
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      ANGAGCATGGNCGATTTGCCAGCCCAACTAACAGCTGAAAAAGTAATGGTGACGCGATTT 1238
consensus_8053#1      ------------------------------------------------------------
consensus_8053#2      ------------------------------------------------------------
                                                                                  

consensus_8053#0      TTAG 1242
consensus_8053#1      ----
consensus_8053#2      ----