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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8063#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1113 fasta sequence
[CGACCCACGCGTCCGATAACAACAAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACAACCAGCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTGTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGA-TAAACAAACAGAACGATCTACAAATTGCAATGACCGGCGAAAAGAATGCTTTCTCCAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATCAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAAGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAAT-CGCTGGTTGCGAACAGTAAACGAACCCCACGGAAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGGGAG-CAGTGGAAGTGGTAATCAGCAATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGTCCCCCATTCTCCCCACCCC-TCGTTCGAAGACTAAAGACAGAGGCAGGAAGCAAGCAAGACTAATGATGATGCACTGCCCTCTCAACGAAGCAATCTTTTAACACAACAAAGCAACCATAGAACAAGTGGGATGGAATGGAAACGTATAGTGAG--AGCTGTTTGGAAGCGCTAAAAGGTCTCCGTTTTGCAACTTTGTTGCAAAAAAAAAACGAGTGTGTCAACCGTGCCTGAAGGAAGGGTCCATGATTGGTTGGAGTATGTCGTGTTTGTATGATTGCCACACCGATATTGCCAAAACTTAAAACAAAAAGAGGTAAAAACAAATCATAGACGAGTATAATATTTTAT-CTTCCAAAAAAACGTGGGAAAGTTGGGATTTTACCGGTACACTTGTTAAGAGCGCAGG-GAGCGCTAGTAC-GTGAACAATCAAAATAAAGTAAACA]
[+] EMBL BM650081 [CGACCCACGCGTCCGATAACAACAAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACAACCAGCAGCACAATTACGACATTCCAGGGCAATTATTCCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTGTCTGCTGGATTGCTACAGATTTATGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGA TAAACAAGCAGAACGATCTACAAATTGCAATGACCAGCGAAAAGAATGCTTTCTCCAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGACGCGCATTAAAATGCAAATGCATCAAATTCATCAACGAACAAAAAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAGGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAAT CGCTGGTTGCGAACAGTAAACGAACCCCACGGAAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGGGAG CAGTGGAAGTGGTAATCAGCAATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGTCCCCCATTCTCCCCACCCCTTGGTTGGAAGACTAAAGACAGAGG ]
[+] EMBL CNS08FLG [ AAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACAACCAGCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTGTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGA TAAACAAACAGAACGATCTACAAATTGCAATGACCGGCGAAAAGAAAAAATTCTCCAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATCAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAAGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAAT CGCTGGTTGCGAACAGTAAACGAACCCCACGGAAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGGGAG CAGTGGAAGTGGTAATCAGCAATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGT CCCCATTCTCCCCACCCC TCGTTCGAAGACTAAAGACAGAGGCAGGAAGCAAGCAAGACTAATGATGATGCACTGCCCTCTCAACGAAGCAATCTTTTAACACAACAAAGCAACCATAGAACAAGTGGGATGGAATGGAAACGTATAGTGAG AGCTGTTTGGAAGCGCTAAAAGGTCTCCGTTTTGCAACTTTGTTGCAAAAAAAAAACGAGTGTGTCAACCGTGCCTGAAGGAAGGGTCCATGATTGGTTGGAGTATGTCGTGTTTGTATGATTGCCACACCGATATTGCCAAAACTTAAAACAAAAAGAGGTAAAAACAAATCATAGACGAGTATAATATTTTAT CTTCCA ]
[+] EMBL CNS09QJ3 [ AAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACAACCAGCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAAC CGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTGTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGATTAAACAAACAGAACGATCTACAAATTGCAATGACCGGCGAAAAGAATGCTTTCTCCAGCCGGCAGATACAGGAA ]
[+] EMBL CNS09Q8P [ TGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACAACCAGCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTGTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGA TAAACAAACAGAACGATCTACAAATTGCAATGACCGGCGAAAAGAATGCTTTCTCCAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATCAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAAGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAATGCGCTGGTTGCGAACAGTAAACGAACCCCACGGAAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGGGAGCCAGTGGAAGTGGTAATCAGCAATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGT CCCCATTCTCCCCACCCC TCGTTCGAAGACTAAAGACAGAGGCAGGAAGCAAGCAAGACTAATGATGATGCACTGCCCTCTCAACGAAGCAATCTTTTAAAAAAAAAAAGCAACCATAGAACAAGTGGGATGGGATGGAAACGTATAGTGAG AGCTGTTTGGAAGCGCTA ]
[+] EMBL BM648212 [ ccGCAACTTTTTCGTGTTTTCTGTACGACCAGCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGTACTGTCGGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACATGAAGGAACTGA TAAACAAGCAGAACGATCTACAAATTGCAATGACCAGCGAAAAGAATGCTTTCTCCAGTCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATTAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAGGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAAT CGCTGGTTGCGAACAGTAAACGAACCCCACGGAAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGAGAG CAGTGGAAGTGGTAATCAGCAATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGTCCCCCATTCTCCCCACCCC TCGTTCGAAGACTAAAGACAGAGGCAGGAAGCAAGCAAGACTAATGATGATGCAC ]
[-] EMBL CNS08FLH [ AAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTGTCTGCCGGATTGCTACAGATTTACGAGCCAAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGA TAAACAAACAGAACGATCTACAAATTGCAATGACCGGCGAAAAGAATGCTTTCTCCAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATCAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAAGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAAT CGCTGGTTGCGAACAGTAAACGAACCCCACGGAAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGGGAG CAGTGGAAGTGGTAATCAGCAATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGTCCCCCATTCTCCCCACCCC TCGTTCGAAGACTAAAGACAGAGGCAGGAAGCAAGCAAGACTAATGATGATGCACTGCCCTCTCAACGAAGCAATCTTTTAACACAACAAAGCAACCATAGAACAAGTGGGATGGAATGGAAACGTATAGTGAGTTTTTTGTTTGGAAGCGCTAAAAGGTCTCCGTTTTGCAACTTTGTTGCAAAAAAAAAACGAGTGTGTCAACCGTGCCTGAAGGAAGGGTCCATGATTGGTTGGAGTATGTCGTGTTTGTATGATTGCCACACCGATATTGCCAAAACTTAAAACAAAAAGAGGTAAAAACAAATCATAGACGAGTATAATATTTTAT CTTCCAAAAAAACGTGGGAAAGTTGGGATTTTACCGGTACACTTGTTAAGAGCGCAGG GAGCGCTAGTAC GTGAACAATCAAAATAAA ]
[-] EMBL CNS09Q8Q [ AACACAAATCGCATTTAATTAACGACATTGATCGGGGGACTTTTGTCCCCCATTCTCCCCACCCC TCGTTCGAAGACTAAAGACAGAGGCAGGAAGCAAGCAAGACTAATGATGATGCACTGCCCTCTCAACGAAGCAATCTTTTAACACAACAAAGCAACCATAGAACAAGTGGGATGGGATGGAAACGTATAGTGAG AGCTGTTTGGAAGCGCTAAAAGGTCTCCGTTTTGCAACTTTGTTGCAAAAAAAAAACGAGTGTGTCAACCGTGCCTGAAGGAAGGGTCCATGATTGGTTGGAGTATGTCGTGTTTGTATGATTGCCACACCGATATTGCCAAAACTTAAAACAAAAAGAGGTAAAAACAAATCATAGACGAGTATAATATTTTAT CTTCCAAAAAAACGTGGGAAAGTTGGGATTTTACCGGTACACTTGTTAAGAGCGCAGGCGAGCGCTA ]
[-] EMBL CNS09QJ4 [ GATGGAATGGAAACGTATAGTGAG AGCTGTTTGGAAGCGCTAAAAGGTCTCCGTTTTGCAACTTTGTTGCAAAAAAAAAACGAGTGTGTCAACCGTGCCTGAAGGAAGGGTCCATGATTGGTTGGAGTATGTCGTGTTTGTATGATTGCCACACCGATATTGCCAAAACTTAAAACAAAAAGAGGTAAAAACAAATCATAGACGAGTATAATATTTTATACTTCCAAAAAAACGTGGGAAAGTTGGGATTTTACCGGTACACTTGTTAAGAGCGCAGG GAGCGCTAGTACGGTGAACAATCAAAATAAAGTAAACA]
consensusID : consensus_8063#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 523 fasta sequence
[GTAATGTATGTAAATAACAACAAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACGACCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTTTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGATAAACAAACAGAACGATCTACAAATTGCTATGACCAGCGAAAAGAATGCTTTCTCTAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATTAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAGGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAATCGCTGGTTGCGAACAGTAAAC]
[+] EMBL BM643013 [GTAATGTATGTAAATAACAACAAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTTTCGTGTTTTCTGTACGACCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGCACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACGGTACGGGCACTTTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAGGAAAACCTGAAGGAACTGATAAACAAACAGAACGATCTACAAATTGCTATGACCAGCGAAAAGAATGCTTTCTCTAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAAGCCTACAAAGATAAGGTGGCGCGCATTAAAATGCAAATGCATCAAATTCATCAACGAACAAAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAGGTGAACCAATGTGCAACGAAGCTGCAACAGCTGCATTACGAAGAATCGCTGGTTGCGAACAGTAAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8063#0 -CGACCCACGCGTCCGATAACAACAAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTT 59
consensus_8063#1 GTAATGTATGTA---AATAACAACAAAGCTCGTCCTGCGTGCCGATAATCTGCAACTTTT 57
* * * ********************************************
consensus_8063#0 TCGTGTTTTCTGTACAACCAGCAGCACAATTACGACATTCCAGGGCAATTATTGCAAAGC 119
consensus_8063#1 TCGTGTTTTCTGTACGACCAGCA---CAATTACGACATTCCAGGGCAATTATTGCAAAGC 114
*************** ******* **********************************
consensus_8063#0 ACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACG 179
consensus_8063#1 ACCATGTCTGAGGAAACCTCCGACAGCGAAAGTCAAGACATTCAGGAGCACAATGAAACG 174
************************************************************
consensus_8063#0 GTACGGGCACTGTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAG 239
consensus_8063#1 GTACGGGCACTTTCTGCCGGATTGCTACAGATTTACGAGCCCAAGCTCAGGGAAGTTAAG 234
*********** ************************************************
consensus_8063#0 GAAAACCTGAAGGAACTGATAAACAAACAGAACGATCTACAAATTGCAATGACCGGCGAA 299
consensus_8063#1 GAAAACCTGAAGGAACTGATAAACAAACAGAACGATCTACAAATTGCTATGACCAGCGAA 294
*********************************************** ****** *****
consensus_8063#0 AAGAATGCTTTCTCCAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAA 359
consensus_8063#1 AAGAATGCTTTCTCTAGCCGGCAGATACAGGAAGTCAACGAAATGGTGCTCAAGACGAAA 354
************** *********************************************
consensus_8063#0 GCCTACAAAGATAAGGTGGCGCGCATCAAAATGCAAATGCATCAAATTCATCAACGAACA 419
consensus_8063#1 GCCTACAAAGATAAGGTGGCGCGCATTAAAATGCAAATGCATCAAATTCATCAACGAACA 414
************************** *********************************
consensus_8063#0 AAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAAGTGAACCAATGTGCAACG 479
consensus_8063#1 AAGAATCTCAGGGCAAAAGCGTTGGAAATCCAGGAACTCAAGGTGAACCAATGTGCAACG 474
***************************************** ******************
consensus_8063#0 AAGCTGCAACAGCTGCATTACGAAGAATCGCTGGTTGCGAACAGTAAACGAACCCCACGG 539
consensus_8063#1 AAGCTGCAACAGCTGCATTACGAAGAATCGCTGGTTGCGAACAGTAAAC----------- 523
*************************************************
consensus_8063#0 AAATCTTAATCCCGTTTCCCGCTCAAGGCCAGCAGGGAGCAGTGGAAGTGGTAATCAGCA 599
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 ATCCCAACCCGATTACTGTTTGAAAAACACAAATCGCATTTAATTAACGACATTGATCGG 659
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 GGGACTTTTGTCCCCCATTCTCCCCACCCCTCGTTCGAAGACTAAAGACAGAGGCAGGAA 719
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 GCAAGCAAGACTAATGATGATGCACTGCCCTCTCAACGAAGCAATCTTTTAACACAACAA 779
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 AGCAACCATAGAACAAGTGGGATGGAATGGAAACGTATAGTGAGAGCTGTTTGGAAGCGC 839
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 TAAAAGGTCTCCGTTTTGCAACTTTGTTGCAAAAAAAAAACGAGTGTGTCAACCGTGCCT 899
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 GAAGGAAGGGTCCATGATTGGTTGGAGTATGTCGTGTTTGTATGATTGCCACACCGATAT 959
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 TGCCAAAACTTAAAACAAAAAGAGGTAAAAACAAATCATAGACGAGTATAATATTTTATC 1019
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 TTCCAAAAAAACGTGGGAAAGTTGGGATTTTACCGGTACACTTGTTAAGAGCGCAGGGAG 1079
consensus_8063#1 ------------------------------------------------------------
consensus_8063#0 CGCTAGTACGTGAACAATCAAAATAAAGTAAACA 1113
consensus_8063#1 ----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||