cluster # 809

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Anopheles gambiae
cluster # 809 cluster # 809 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_809#0 length = 348 sequences # 1

consensus_809#1 length = 290 sequences # 1

consensusID : consensus_809#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 348
fasta sequence

                              [GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCATACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGGTAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAAGGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGATGGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCGGCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG]

[+] EMBL AGA281196            [GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCATACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGGTAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAAGGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGATGGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCGGCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG]




>consensus_809#0
GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCAT
ACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGG
TAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAA
GGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGAT
GGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCG
GCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG

consensusID : consensus_809#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 290
fasta sequence

                              [CCGAGGNTNATGGCGACGTGTGTGCGGCTCGATGGCGCTGATGGATGCGGGCGTCCGGTACAGGAAGCGGCGCCGGTGTAGCGATCGGGTTGATAAAACAAAGTACGAAAAAACCAACGGACACAAAAACAACCCCTGGCAGGGGAAACTAACTGCATACCCTGGAACCCCGGGAAATCTGGCTCGGCATCGAGGACTACATGGGCGATATGTGACATNAAGGTGGCGGGTACAAGGCGCGGCATGTACGGCGATACAGGCGGATATAAGGTGCCTGGCATACCGCTGAA]

[+] EMBL AL932567             [CCGAGGNTNATGGCGACGTGTGTGCGGCTCGATGGCGCTGATGGATGCGGGCGTCCGGTACAGGAAGCGGCGCCGGTGTAGCGATCGGGTTGATAAAACAAAGTACGAAAAAACCAACGGACACAAAAACAACCCCTGGCAGGGGAAACTAACTGCATACCCTGGAACCCCGGGAAATCTGGCTCGGCATCGAGGACTACATGGGCGATATGTGACATNAAGGTGGCGGGTACAAGGCGCGGCATGTACGGCGATACAGGCGGATATAAGGTGCCTGGCATACCGCTGAA]




>consensus_809#1
CCGAGGNTNATGGCGACGTGTGTGCGGCTCGATGGCGCTGATGGATGCGGGCGTCCGGTA
CAGGAAGCGGCGCCGGTGTAGCGATCGGGTTGATAAAACAAAGTACGAAAAAACCAACGG
ACACAAAAACAACCCCTGGCAGGGGAAACTAACTGCATACCCTGGAACCCCGGGAAATCT
GGCTCGGCATCGAGGACTACATGGGCGATATGTGACATNAAGGTGGCGGGTACAAGGCGC
GGCATGTACGGCGATACAGGCGGATATAAGGTGCCTGGCATACCGCTGAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_809#0      GATCGGGTTGATAACAAAGTACGAAAACAACGTCACGAAACACCTGCAGGACTACTGCAT 60
consensus_809#1      --------------------CCGAGGNTNATG--GCGACGTGTGTGCGGCTCGATGGCG- 37
                                          ***     * *   ***      *** *  * *  **  

consensus_809#0      ACTGACCGATCTGCTCGGCATCGAGGACTACATGGGCGATATGGACATGAAGGTGGCGGG 120
consensus_809#1      -CTGATGGATGCG---GGCGTCCGGTACAGGA--AGCGGCGCCGGTGTAGCGAT--CGGG 89
                      ****  ***  *   *** **  * **   *   ***     *   *   * *  ****

consensus_809#0      TAGAAGGCGCGGCATGACGGCGATACAGGCGGATATAAAGGTGCCTGGCATACCGCTGAA 180
consensus_809#1      TTGATAAAACAAAGT-ACGAAAAAACCAACGGACACAAAAACA--------ACCCCTGGC 140
                     * **     *    * ***   * **   **** * ***            *** ***  

consensus_809#0      GGTGGTGATGGAAGCGCTGCAGAAATCGATGGAAGCTCGCTTTAAAATACTCGACCTGAT 240
consensus_809#1      AGGGGAAACTAA----CTGCATA---CCCTGGAACCCCGGGAAATCTGGCTCGGCATCGA 193
                      * **  *   *    ***** *   *  ***** * **    *     **** * *   

consensus_809#0      GGACGAAACGATCGGTGCGTCGCGCACCGTGCGGAAAGATTGTTGGCCCGTAACGGATCG 300
consensus_809#1      GGACTACATGGGCGATATGTGAC--ATNAAGGTGGCGGGTACAAGGCGCGGCATGTACGG 251
                     **** * * *  ** *  **  *  *    *  *   * *    *** **  * * *  *

consensus_809#0      -GCTGGTGATCGAGGCACATCAGCGGGCGAAACTGCTCGGACCGGGTGG 348
consensus_809#1      CGATACAGGCGGATATAAGGTGCCTGGC-ATACCGCTGAA--------- 290
                      * *   *   **   *      * *** * ** ***