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Anopheles gambiae
cluster # 8096 cluster # 8096       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8096#0 length = 1607 sequences # 5  
consensus_8096#1 length = 779 sequences # 1  
consensus_8096#2 length = 690 sequences # 2  
consensus_8096#3 length = 249 sequences # 1  

consensusID : consensus_8096#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1607
fasta sequence
                              [CCGCAGTCCTTTACCTCAAATAAGAGCCTCGAATGAAAATCAGATGTCACGCAGTTCCTCTGATTCAGATTCCGAACAAGAACAGTCATCGCCTGGTCGACGTTCGGCTCAAGCACGAATTAAGCGTGATAGCCAACAAAATCACGATGAGATGATACCGCAGGACGGCGACATTTGTGTAGGTTGTCTTGCAGCAGCGTTAAACAGGAAACAGAAAAACAGTGATACCTGTGCTATTACAGACGATGTGGACAGTGATTCTTACGCCGCTGAAACAAACGGTTCTAAAAGTCTACCAGCAACGCTAAAAAAATACAAGGGTAACCATTCAACCGGATCTTGTCGTGGTATGAATCCTCCAGACCATTATCATCCGTATCCTCATAGTAACAACCGTGGCAGCAAAGCTTACCAGACTCAAGATTCGCAACAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATTCAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAACTTAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCATAGCAGCCCAGAGCAGCTTCCAAAAGAAGCTTCTACATCCAAGTTGGATGCAATGGAATCCAATAAACAAATAGAGGACATA-CCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAAGCGACGTTGCTCGCTGTCACGCAATTCATCTTGCTCATCAGCTGATCGCAAGGACATAGTAACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGAAACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAAAGAAACTCGG-AAAATTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATGGCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGAATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTCCGTTAGATAAAGCATGTGTTTGTACGGACTTTTCCCGCAATGGGAATGGGTTTCTGCATTGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAACCTAA-AGGAAACATTTGTAG-GGCACGT-AATATTTTAATCCCGTTCTTTGATA-GAATACCAAACCACTACAATGGCGTTTCGCGT-TGTTGTTTAGCAATGACGAA-ATTTAA-ATAGTATAGATA-ATTCTAGTGAAA-TGTT-TCTAGCAATATCGCGCAGTCACTAAATCTT-GGTATTCTACTACAATGCA-ATAA-A-TCAGAAACTATTCCACAGTAAAAAAAAACTTTTTCCGAATTAAAGTCCTACGCAAATTAAATGATAGATGCTATGTTTTTTTTTTTTTAATTAGATAGGAGGAATATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAA]

[+] EMBL BM649772             [CCGCAGTCCTTTACCTCAAATAAGAGCCTCGAATGAAAATCAGATGTCACGCAGTTCCTCTGATTCAGATTCCGAACAAGAACAGTCATCGCCTGGTCGACGTTCGGCTCAAGCACGAATTAAGCGTGATAGCCAACAAAATCACGATGAGATGATACCGCAGGACGGCGACATTTGTGTAGGTTGTCTTGCAGCAGCGTTAAACAGGAAACAGAAAAACAGTGATACCTGTGCTATTACAGACGATGTGGACAGTGATTCTTACGCCGCTGAAACAAACGGTTCTAAAAGTCTACCAGCAACGCTAAAAAAATACAAGGGTAACCATTCAACCGGATCTTGTCGTGGTATGAATCCTCCAGACCATTATCATCCGTATCCTCATAGTAACAACCGTGGCAGCAAAGCTTACCAGACTCAAGATTCGCAACAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATTCAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAACTTAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCATAGCAGCCCAGAGCAGCTTCCAAAAGAGGCTTCTACATCCAAGTTGGATGCAATGGAATCCAATAAACAAATAGAGGACGTACCCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM600517             [                                                                                                                                                                                                                  ccgGAAAAACAGTGATACCTGTGCTATTACAGACGATGTGGACAGTGATTCTTACGCCGCTGAAACAAACGGTTCTAAAAGTCTACCAGCAACGCTAAAAAAATACAAGGGTAACCATTCAACCGGATCTTGTCGTGGTATGAATCCTCCAGACCATTATCATCCGTATCCTCATAGTAACAACCGTGGCAGCAAAGCTTACCAGACTCAAGATTCGCAACAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATTCAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAACTTAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCATAGCAGCCCAGAGCAGCTTCCAAAAGAAGCTTCTACATCCAAGTTGGATGCAATGGAATCCAATAAACAAATAGAGGACATA CCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAAGCGACGTTGCTCGCTGTCACGCAATTCATCTTGCTCATCAGCTGATCGCAAGGACATAGTAACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGAAACGGAACCAAACAGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX612965             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCATAGCAGCCCAGAGCAGCTTCCAAAAGAAGCTTCTACATCCAAGTTGGATGCAATGGAATCCAATAAACAAATAGAGGACATA CCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAAGCGACGTTGCTCGCTGTCACGCAATTCATCTTGCTCATCAGCTGATTGCAAGGACATAGTAACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGAAACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAAAGAAACTCGG AAAATTGATTAAATCGATGGTATCGTTTAAAACCTTCGGGTAATCCATGGCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGAATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTCCGTTAGATAAAGCATGTGTTTGTACGGACTTTTCCCGCAATGGGAATGGGTTTCTGCATTGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAACCTAA AGGAAACATTTGTAG GGCACGT AATATTTTAATCCCGTTCTTTGATA GAATACCAAACCACTACAATGGCGTTTCGCGT TGTTGTTTAGCAATGACGAA ATTTAA ATAGTATAGATA ATTCTAGTGAAA TGT                                                                                                                                                                                                                 ]
[+] EMBL BX615655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAAAGAAACTCGGAAAAAGTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATGGCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGAATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTCCGTTAGATAAAGCATGTGTTTGTACGGACTTTTCCCGCAATGGGAATGGGTTTCTGCGTTGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAACCTAA AGGAAACATTTGTAG GGCACGT AATATTTTAATCCCGTTCTTTGATA GAATACCAAACCACTACAATGGCGTTTCGCGT TGTTGTTTAGCAATGACGAA ATTTAA ATAGTATAGATA ATTCTAGTGAAA TGTT TCTAGCAATATCGCGCAGTCACTAAATCTT GGTATTCTACTACAATGCA ATAA A TCAGAAACTATTCCACAGTAAAAAAAAACTTTTTCCGAATTAAAGTCCTACGCAAATTAAATGATAGATGCTATGTTTTTTTTTTTTTAATTAGATAGGAGGAATATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAA]
[+] EMBL AL929956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aggTTAAA  CATCGGGT AT CATGGCACGATGATAGATAATGATCGCTTTTCTGCTAACAACCAAGAAACACGGTTGATGACGAATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTCCGTTAGATAAAGCATGTG TTGTACGGACTTTTCCCGCAATGGGAATGGGTTTCTGCATTGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAACCTAACAGGAAACATTTGTAGCGGCACGTAAATATTTTAATCCCGTTCTTTGATAGGAATACCAAA CACTACAATGGCGTTTCGCGTACGTAGTNTAGCAATGACGAANATTTAACATAGTATAGATACATTCTAGTGAAACTGTTCTCTAGCAATATCGCGCAGTCACTAAATCTTGGGTATTCCACTACAATGCACATAACACTCAGAAACTATTCCACcaggtc                                                                                                                               ]


>consensus_8096#0 CCGCAGTCCTTTACCTCAAATAAGAGCCTCGAATGAAAATCAGATGTCACGCAGTTCCTC TGATTCAGATTCCGAACAAGAACAGTCATCGCCTGGTCGACGTTCGGCTCAAGCACGAAT TAAGCGTGATAGCCAACAAAATCACGATGAGATGATACCGCAGGACGGCGACATTTGTGT AGGTTGTCTTGCAGCAGCGTTAAACAGGAAACAGAAAAACAGTGATACCTGTGCTATTAC AGACGATGTGGACAGTGATTCTTACGCCGCTGAAACAAACGGTTCTAAAAGTCTACCAGC AACGCTAAAAAAATACAAGGGTAACCATTCAACCGGATCTTGTCGTGGTATGAATCCTCC AGACCATTATCATCCGTATCCTCATAGTAACAACCGTGGCAGCAAAGCTTACCAGACTCA AGATTCGCAACAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATT CAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAACTT AATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCA TAGCAGCCCAGAGCAGCTTCCAAAAGAAGCTTCTACATCCAAGTTGGATGCAATGGAATC CAATAAACAAATAGAGGACATACCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAA GCGACGTTGCTCGCTGTCACGCAATTCATCTTGCTCATCAGCTGATCGCAAGGACATAGT AACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGA AACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAA AGAAACTCGGAAAATTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATGG CACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGAA TCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTC CGTTAGATAAAGCATGTGTTTGTACGGACTTTTCCCGCAATGGGAATGGGTTTCTGCATT GATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAG CAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGC GAGCAACCTAAAGGAAACATTTGTAGGGCACGTAATATTTTAATCCCGTTCTTTGATAGA ATACCAAACCACTACAATGGCGTTTCGCGTTGTTGTTTAGCAATGACGAAATTTAAATAG TATAGATAATTCTAGTGAAATGTTTCTAGCAATATCGCGCAGTCACTAAATCTTGGTATT CTACTACAATGCAATAAATCAGAAACTATTCCACAGTAAAAAAAAACTTTTTCCGAATTA AAGTCCTACGCAAATTAAATGATAGATGCTATGTTTTTTTTTTTTTAATTAGATAGGAGG AATATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAA



consensusID : consensus_8096#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 779
fasta sequence
                              [AGGCCAAGAATCGGCACGAGGGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAACCTAAAGGAAACATTTGTAGGGCACGTAATATTTTAATCCCGTTCTTTGATAGAATACCAAACCACTACAATGGCGTTTCGCGTTGTTGTTTAGCAATGACGAAATTTAAATAGTATAGATAATTCTAGTGAAATGTTTCTAGCAATATCGCGCAGTCACTAAATCTTGGTATTCCACTACAATGCAATAAATCAGAAACTATTCCACAGTAAGAGAAAGAACTTTGTTCCGAATTAAAGTCCTACGCAAATTAAATGATAGATACTATGTTNGTGGTTGTAANTTAGATAGGAGGAATATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAAGAACTATTTGCAAAAAGGAAGAAAAGCGCTTTATCGTTTGATGGTGCATGATTGGCTATAGGGATTNNGTNTATNATTCAAAGCCCAGCAATACGCTTAGATATGCTCATGTATGATTGAAAACGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATTGAAGGGTAGCAAACTAACCAAAAAATAATTGCACATGGGCTTTAACATGGACCTTTGGTCCAAGTTTACNNTCGGAACTNAAGAGAAAAACCGTATTNAGGCCAAAAGNANTNCCGGGAAATTTGGA]

[+] EMBL BX467955             [AGGCCAAGAATCGGCACGAGGGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAACCTAAAGGAAACATTTGTAGGGCACGTAATATTTTAATCCCGTTCTTTGATAGAATACCAAACCACTACAATGGCGTTTCGCGTTGTTGTTTAGCAATGACGAAATTTAAATAGTATAGATAATTCTAGTGAAATGTTTCTAGCAATATCGCGCAGTCACTAAATCTTGGTATTCCACTACAATGCAATAAATCAGAAACTATTCCACAGTAAGAGAAAGAACTTTGTTCCGAATTAAAGTCCTACGCAAATTAAATGATAGATACTATGTTNGTGGTTGTAANTTAGATAGGAGGAATATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAAGAACTATTTGCAAAAAGGAAGAAAAGCGCTTTATCGTTTGATGGTGCATGATTGGCTATAGGGATTNNGTNTATNATTCAAAGCCCAGCAATACGCTTAGATATGCTCATGTATGATTGAAAACGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATTGAAGGGTAGCAAACTAACCAAAAAATAATTGCACATGGGCTTTAACATGGACCTTTGGTCCAAGTTTACNNTCGGAACTNAAGAGAAAAACCGTATTNAGGCCAAAAGNANTNCCGGGAAATTTGGA]


>consensus_8096#1 AGGCCAAGAATCGGCACGAGGGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTT GGAATCCTCCTACGAAACCAGCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTC AATAATAATTCTAGCAAAAGCGAGCAACCTAAAGGAAACATTTGTAGGGCACGTAATATT TTAATCCCGTTCTTTGATAGAATACCAAACCACTACAATGGCGTTTCGCGTTGTTGTTTA GCAATGACGAAATTTAAATAGTATAGATAATTCTAGTGAAATGTTTCTAGCAATATCGCG CAGTCACTAAATCTTGGTATTCCACTACAATGCAATAAATCAGAAACTATTCCACAGTAA GAGAAAGAACTTTGTTCCGAATTAAAGTCCTACGCAAATTAAATGATAGATACTATGTTN GTGGTTGTAANTTAGATAGGAGGAATATAGCAGTTACTCATTTTGCAATTTAGACTCTTA AACTACATAAGAACTATTTGCAAAAAGGAAGAAAAGCGCTTTATCGTTTGATGGTGCATG ATTGGCTATAGGGATTNNGTNTATNATTCAAAGCCCAGCAATACGCTTAGATATGCTCAT GTATGATTGAAAACGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATTGAAGGGTA GCAAACTAACCAAAAAATAATTGCACATGGGCTTTAACATGGACCTTTGGTCCAAGTTTA CNNTCGGAACTNAAGAGAAAAACCGTATTNAGGCCAAAAGNANTNCCGGGAAATTTGGA



consensusID : consensus_8096#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 690
fasta sequence
                              [CCGCCCACGCGTCCGCAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATTCAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCATAGCAGCCCAGAGCAGCTTCCAAAAGAGGCTTCTACATCCAAGTTGGATGCAATGGAATCCAATAAACAAATAGAGGACGTACCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAAGCGACGTTGCTCGCTGTCACGCAATTCATCTTGTTCATCAGCTGATCGCAAGGACATAGTAACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGAAACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAAAGAAACTCGGAAAAAGTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATGGCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGAATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTCCGTAAGATAAAGCAGGTGTTTGGACGGA]

[+] EMBL BM635918             [CCGCCCACGCGTCCGCAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATTCAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCATAGCAGCCCAGAGCAGCTTCCAAAAGAGGCTTCTACATCCAAGTTGGATGCAATGGAATCCAATAAACAAATAGAGGACGTACCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAAGCGACGTTGCTCGCTGTCACGCAATTCATCTTGTTCATCAGCTGATCGCAAGGACATAGTAACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGAAACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAAAGAAACTCGGAAAAAGTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATGGCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGAATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTTC                            ]
[+] EMBL BX614456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATAAGTATCGCTTTTCGGCTACCACCCAAGAAACACGGTTGAAGACGAATCGAAACACGTAAGGGGATAGAGTGAGACGGTACAGGCGAGACATATGTGAGTCAGTTTCCGTAAGATAAAGCAGGTGTTTGGACGGA]


>consensus_8096#2 CCGCCCACGCGTCCGCAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATT CCATTCAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGC AAATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCC ATAGCAGCCCAGAGCAGCTTCCAAAAGAGGCTTCTACATCCAAGTTGGATGCAATGGAAT CCAATAAACAAATAGAGGACGTACCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCA AGCGACGTTGCTCGCTGTCACGCAATTCATCTTGTTCATCAGCTGATCGCAAGGACATAG TAACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATG AAACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAA AAGAAACTCGGAAAAAGTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCAT GGCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACG AATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTT TCCGTAAGATAAAGCAGGTGTTTGGACGGA



consensusID : consensus_8096#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 249
fasta sequence
                              [ATAGGGATTTGTTTTATTCAAACCCACAATACGCTTAGATATGCTCATGTATGATTGAAAACGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATGAAGGTAGCAACTACCAAAATAATGAATGGCTTAACATGACTTTGTCAATTTACTCGACTAAGAAAACTATAGCCAACATCCGCAACTAGACATTTGGCTTTAAAATTGAGCTAGAAATAGTGTGCTGATAGGACATTGAAATAAAATAA]

[+] EMBL BX608921             [ATAGGGATTTGTTTTATTCAAACCCACAATACGCTTAGATATGCTCATGTATGATTGAAAACGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATGAAGGTAGCAACTACCAAAATAATGAATGGCTTAACATGACTTTGTCAATTTACTCGACTAAGAAAACTATAGCCAACATCCGCAACTAGACATTTGGCTTTAAAATTGAGCTAGAAATAGTGTGCTGATAGGACATTGAAATAAAATAA]


>consensus_8096#3 ATAGGGATTTGTTTTATTCAAACCCACAATACGCTTAGATATGCTCATGTATGATTGAAA ACGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATGAAGGTAGCAACTACCAAAAT AATGAATGGCTTAACATGACTTTGTCAATTTACTCGACTAAGAAAACTATAGCCAACATC CGCAACTAGACATTTGGCTTTAAAATTGAGCTAGAAATAGTGTGCTGATAGGACATTGAA ATAAAATAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      CCGCAGTCCTTTACCTCAAATAAGAGCCTCGAATGAAAATCAGATGTCACGCAGTTCCTC 60
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      TGATTCAGATTCCGAACAAGAACAGTCATCGCCTGGTCGACGTTCGGCTCAAGCACGAAT 120
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      TAAGCGTGATAGCCAACAAAATCACGATGAGATGATACCGCAGGACGGCGACATTTGTGT 180
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AGGTTGTCTTGCAGCAGCGTTAAACAGGAAACAGAAAAACAGTGATACCTGTGCTATTAC 240
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ---------------------------------AGGCCAAGAATCGGCACGAGGGATGTA 27
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AGACGATGTGGACAGTGATTCTTACGCCGCTGAAACAAACGGTTCTAAAAGTCTACCAGC 300
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      GGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCAGCAGAGC 87
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AACGCTAAAAAAATACAAGGGTAACCATTCAACCGGATCTTGTCGTGGTATGAATCCTCC 360
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      TTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAGCGAGCAA 147
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AGACCATTATCATCCGTATCCTCATAGTAACAACCGTGGCAGCAAAGCTTACCAGACTCA 420
consensus_8096#2      ----------------------------------------------------CCGCCCAC 8
                                                                                  

consensus_8096#1      CCTAAAGGAAACATTTGTAGGGCACGTAATATTTTAATCCCGTTCTTTGATAGAATACCA 207
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AGATTCGCAACAAACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATT 480
consensus_8096#2      GCGTCCGCA---AACCGCTCGTGATGATGCAAACGCGCCACATTCATCGAAAATTCCATT 65
                                                                                  

consensus_8096#1      AACCACTACAATGGCGTTTCGCGTTGTTGTTTAGCAATGACGAAATTTAAATAGTATAGA 267
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      CAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAACTT 540
consensus_8096#2      CAAGTTTTACAAAACTGATCGCGGTCAGCCACGTAAAACGCGAACACCGCTCCGCAA--- 122
                                                                                  

consensus_8096#1      TAATTCTAGTGAAATGTTTCTAGCAATATCGCGCAGTCACTAAATCTTGGTATTCCACTA 327
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCA 600
consensus_8096#2      -ATTCCTCAATCGATTTCAGCACCCTGTGATACTGACAGCTCGTTGCGCGTATGCATCCA 181
                                                                                  

consensus_8096#1      CAATGCAATAAATCAGAAACTATTCCACAGTAAGAGAAAGAACTTTGTTCCGAATTAAAG 387
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      TAGCAGCCCAGAGCAGCTTCCAAAAGAAGCTTCTACATCCAAGTTGGATGCAATGGAATC 660
consensus_8096#2      TAGCAGCCCAGAGCAGCTTCCAAAAGAGGCTTCTACATCCAAGTTGGATGCAATGGAATC 241
                                                                                  

consensus_8096#1      TCCTACGCAAATTAAATG-ATAGATACTATGTTNGTGGTTGTAANTTAGATAGGAGGAAT 446
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      CAATAAACAAATAGAGGACATACCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAA 720
consensus_8096#2      CAATAAACAAATAGAGGACGTACCTCAAGTGCATATAAGTCTACATCCGGTCGATGTCAA 301
                                                                                  

consensus_8096#1      ATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAAGAACTATTTGCAAAAA 506
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      GCGACGTTGCTCGCTGTCACGCAATTCATCTTGCTCATCAGCTGATCGCAAGGACATAGT 780
consensus_8096#2      GCGACGTTGCTCGCTGTCACGCAATTCATCTTGTTCATCAGCTGATCGCAAGGACATAGT 361
                                                                                  

consensus_8096#1      GGAAGAAAAGCGCTTTATCGTTTGATGGTGCATGATTGGCTATAGGGATTNNGTNTATNA 566
consensus_8096#3      -----------------------------------------ATAGGGATTTGTTTTATT- 18
consensus_8096#0      AACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGA 840
consensus_8096#2      AACATGCGAAGATTTGAAAATGGCAATGGATTACTCCAACGAGGAGGATGTTTCAGATGA 421
                                                               *   ****       **  

consensus_8096#1      TTCAAAGCCCAGCAAT----ACGCTTAGATATGCTCATGTATG---------ATTGAAAA 613
consensus_8096#3      --CAAACCC--ACAAT----ACGCTTAGATATGCTCATGTATG---------ATTGAAAA 61
consensus_8096#0      AACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAA 900
consensus_8096#2      AACGGAACCAAACAGTGATAATGATCTGATAGTTAGACGATCGGAGCGGGGTAGCGAAAA 481
                        *  * **   ** *    * * *  ****     * *   *         *  *****

consensus_8096#1      CGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATTGAAG--GGTAGCAAACTAACC 671
consensus_8096#3      CGATGTTTGAAAACACGAAATGAATAAGCTAAATTAATGAAGGT-AGCAACTACCAAAAT 120
consensus_8096#0      AGAAACTCGGAAAAT-TGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATG 959
consensus_8096#2      AGAAACTCGGAAAAAGTGATTAAATCGATGGTATCGTTTAAAACCATCGGGTAATCCATG 541
                       **   * * ***     * * ***       **   *  *           *    *  

consensus_8096#1      AAAAAATAATTGCACATGGGCTT-----------TAAC--ATGGA-CCTTTGGTCCAAGT 717
consensus_8096#3      AATGAATGGCTTAACATGACTTTGTCAATTTACTCGACTAAGAAA-ACTATAGCCAACAT 179
consensus_8096#0      GCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGA 1019
consensus_8096#2      GCACGATGATAGATAATGATCGCTTTTCTGCTACCACCCAAGAAACACGGTTGATGACGA 601
                           **        ***                   *  *   *  *  * *   *   

consensus_8096#1      TTACNNTCGGAACTNAAGAGAAAAACCGTATTNAGGCCAAAAGNANTNCCGGGAAA-TTT 776
consensus_8096#3      CCGCAACTAGACATTTGGCTTTAAAATTGAGCTAGAAATAGTGTGCTGATAGGACA-TTG 238
consensus_8096#0      ATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTT 1079
consensus_8096#2      ATCGAAACACGTAATGTGATAGAGTGAGACTGTACAGGCGAGACATATGTGAGTCAGTTT 661
                                       *    *          *                  *  * ** 

consensus_8096#1      GGA--------------------------------------------------------- 779
consensus_8096#3      AAATAAAATAA------------------------------------------------- 249
consensus_8096#0      CCGTTAGATAAAGCATGTGTTTGTACGGACTTTTCCCGCAATGGGAATGGGTTTCTGCAT 1139
consensus_8096#2      CCGTAAGATAAAGCAGGTGTTTGGACGGA------------------------------- 690
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      TGATGTAGGTGGACTTATTACGATAAATAATCCCTCCTTTGGAATCCTCCTACGAAACCA 1199
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      GCAGAGCTTTCAGCTTAGACAGTAGTTCTTGAACACTTTCAATAATAATTCTAGCAAAAG 1259
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      CGAGCAACCTAAAGGAAACATTTGTAGGGCACGTAATATTTTAATCCCGTTCTTTGATAG 1319
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AATACCAAACCACTACAATGGCGTTTCGCGTTGTTGTTTAGCAATGACGAAATTTAAATA 1379
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      GTATAGATAATTCTAGTGAAATGTTTCTAGCAATATCGCGCAGTCACTAAATCTTGGTAT 1439
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      TCTACTACAATGCAATAAATCAGAAACTATTCCACAGTAAAAAAAAACTTTTTCCGAATT 1499
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------------------
consensus_8096#3      ------------------------------------------------------------
consensus_8096#0      AAAGTCCTACGCAAATTAAATGATAGATGCTATGTTTTTTTTTTTTTAATTAGATAGGAG 1559
consensus_8096#2      ------------------------------------------------------------
                                                                                  

consensus_8096#1      ------------------------------------------------
consensus_8096#3      ------------------------------------------------
consensus_8096#0      GAATATAGCAGTTACTCATTTTGCAATTTAGACTCTTAAACTACATAA 1607
consensus_8096#2      ------------------------------------------------
                                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)