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Anopheles gambiae
cluster # 8104 cluster # 8104       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8104#0 length = 1912 sequences # 7  
 consensus_8104#1 length = 705 sequences # 1  
consensus_8104#2 length = 641 sequences # 1  
consensusID : consensus_8104#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1912
fasta sequence 
                              [CCG-CAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTCTGCAAATGCGAAGGAATGCGTAAGTTTGCTGCAGCTTCTGCTCAGTGTTGCAACGACTGCATCGAGAGACAAACGGCTTACCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCTTTGTGCTCGGTGAGTGTATGTATGAGTCATCAGCAGGGGCACGCGAAACCGTGTAATCTTCTATTCTTAACCACGGCCGGACAAAAACGCTGTTAAAAGATAGCGGAAGGAAGGAAGTTCACTCGGTAGGGGCGTTGTGTCGTACAGTCGAAGTGGAAGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCTGCGATCAGCTGGGCACGGAAAATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGCCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATTCTGCTACATTGCCGATGTGACGGTGGAGAAAACTCGCGCGACCAAAATGGCTATCGTGGAGGCTGCCGTATTTACCGGGCTGCTGGCGGGTACGCTAAGCAGCAGCTACATACTTCGCTGGACGAACGGTACGACCGTGTTTGCGATCGCAGCCGGGGCCGTGTTTCTTGGCCTGATGTACATAATATTCTACATCGAGGAGAGCATCAAACCGAACGAGCTGAGCGAAACGAACAACCGGGCGCGGGAGCTGTTCCGGCTCGATTTGGTGTCGGAGCTGATGCAAACGTGCTTTAAACGGCGCCCGAACTATGATCGTTTGATCATTTGGTTGGTAATATTAGCCCTTGCGGCCAACATCTTCGCGATGGATGGCTCCCAAACGGT-GTTTCTGCTGTTTCTCCGGGAGCGTTTCGAGTGGACGGTGAAGGATTACTCGTACTACGATGCGTCGGCTATCGTATTTATGATTATTGGCAACACGGCGGGCCTGTACGTCATTCGCAAGCTGTTCAACCCGTCCGTCACTGTGCTGGCCGCCCTCGGGTACTGCTGCTACGCGATCAACAGCACCATTCAAGCGCTGGCCTCAGAACCATGGCATTTGTACATGGGCACAGCGATTTGCTTTATGAAAGGCATTGCGGGACCGATGAGCAGAGCCGTTATCTCAAACACGGCACCGCCCAATGATATTGGTAAGATTTTCTCTCTGACAACGTCGATTGAATCAATCACGCCGCTGTTCTCGGCCCCGCTGTACACGTTCGTATACAAGAGTACCCTCGCTTGGTACCCGGGCGCATTTAACCTAATCACTGCCACCGTCTACTTCACCTGCGCGTGCCTTATGATATTTGCCAAGATTTTCCAAAGTATGTATCAAACGACTA]

[+] EMBL BM597333             [CCG CAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTCTGCAAATGCGAAGGAATGCGTAAGTTTGCTGCAGCTTCTGCTCAGTGTTGCAACGACTGCATCGAGAGACAAACGGCTTACCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACCCCCACTTTTACCGTACTCGCTGGTGCTTCGACTCGCGTTATTGGAAAAGTTCTTTGTGCTCGGTGAGTGTATGTATGAGTCATCAGCAGGGGCACGCGAAACCGTGTAATCTTCTATTCTTAACCACGGCCGGACAAAAACGCTGTTAAAAGATAGCGGAAGGAAGGAAGTTCACTCGGTAGGGGCGTTGTGTCGTACAGTCGAAGTGGAAGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTCGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCCTCTGCTGTCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM602357             [CCGCCAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTCTGCAAATGCGAAGGAATGCGTAAGTTTGCTGCAGCTTCTGCTCAGTGTTGCAACAACTGCATCGAGAGACAAACGGCTTACCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCTTTGTGCTCGGTGAGTGTATGTATGACTCATCAGCAGGGGCACGCGAAACCGTGTAATCTTCTATTCTTAACCACGGCCGGACAAAAACGCTGTTAAAAGATAGCGGAAGGAAGGAAGTTCACTCGGTAGGGGCGTTGTGTCGTACAGTCGAAGTGGAAGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM655150             [                                                                                                                  ccgCTGCATCGAGAGACAAACGGCTTACCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCTTTGTGCTCGGTGAGTGTATGTATGAGTCATCAGCAGGGGCACGCGAAACCGTGTAATCTTCTATTCTTAACCACGGCCGGACAAAAACGCTGTTAAAAGATAGCGGAAGGAAGGAAGTTCACTCGGTAGGGGCGTTGTGTCGTACAGTCGAAGTGGAAGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCTGCGATCAGCTGGGCACGGAAAATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGCCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM614893             [                                                                                                                                                                                                                                                                                                                                                                                                                               ccgGGAAGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCTGCGATCAGCTGGGCACGGAAAATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGCCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATTCTGCTACATTGCCGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM634956             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgCTCGGCCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATTCTGCTACATTGCCGATGTGACGGTGGAGAAAACTCGCGCGACCAAAATGGCTATCGTGGAGGCTGCCGTATTTACCGGGCTGCTGGCGGGTACGCTAAGCAGCAGCTACATACTTCGCTGGACGAACGGTACGACCGTGTTTGCGATCGCAGCCGGGGCCGTGTTTCTTGGCCTGATGTACATAATATTCTACATCGAGGAGAGCATCAAACCGAACGAGCTGAGCGAAACGAACAACCGGGCGCGGGAGCTGTTCCGGCTCGATTTGGTGTCGGAGCTGATGCAAACGTGCTTTAAACGGCGCCCGAACTATGATCGTTTGATCATTTGGTTGGTAATATTAGCCCTTGCGGCCAACATCTTCGCGATGGATGGCTCCCAAACGGTGGTTTCTGCTGTTTCTCCGGGAGCGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX619054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATTCTGCTACATTGCCGATGTGACGGTGGAGAAAACTCGCGCCACCAAAATGGCTATCGTGGAGGCTGCCGTATTTACCGGGCTGCTGGCGGGTACGCTAAGCAGCAGCTACATACTTCGCTGGACGAACGGTACGACCGTGTTTGCGATCGCAGCCGGGGCTGTGTTTCTTGGCCTGATGTACATAATATTCTACATCGAGGAGAGCATCAAACCGAACGAGCTGAGCGAAACGAACAACCGGGCGCGGGAGCTGTTCCGGCTCGATTTGGTGTCGGAGTTGATGCAGACTTGCTTTAAACGGCGCCCGAACTATGATCGTTTGATCATTTGGTTGGTAATATTAGCCCTTGCGGCCAACATCTTCGCGATGGATGGCTCCCAAACGGT GTTTCTGCTGTTTCTGCGGGAGCGTTTCGAGTGGACGGTGAAGGATTACTCGTACTACGATGCGTCGGCTATCGTATTTATGATTATTGGCAACA                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX623173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACGAACAACCGGGCGCGGGAGCTGTTCCGGCTCGATTTGGTGTCGGAGCTGATGCAAACGTGCTTTAAACGGCGCCCGAACTATGATCGTTTGATCATTTGGTTGGTAATATTAGCCCTTGCGGCCAACATCTTCGCGATGGATGGCTCCCAAACGGT GTTTCTGCTGTTTCTCCGGGAGCGTTTCGAGTGGACGGTGAAGGATTACTCGTACTACGATGCGTCGGCTATCGTATTTATGATTATTGGCAACACGGCGGGCCTGTACGTCATTCGCAAGCTGTTCAACCCGTCCGTCACTGTGCTGGCCGCCCTCGGGTACTGCTGCTACGCGATCAACAGCACCATTCAAGCGCTGGCCTCAGAACCATGGCATTTGTACATGGGCACAGCGATTTGCTTTATGAAAGGCATTGCGGGACCGATGAGCAGAGCCGTTATCTCAAACACGGCACCGCCCAATGATATTGGTAAGATTTTCTCTCTGACAACGTCGATTGAATCAATCACGCCGCTGTTCTCGGCCCCGCTGTACACGTTCGTATACAAGAGTACCCTCGCTTGGTACCCGGGCGCATTTAACCTAATCACTGCCACCGTCTACTTCACCTGCGCGTGCCTTATGATATTTGCCAAGATTTTCCAAAGTATGTATCAAACGACTA]




>consensus_8104#0
CCGCAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTC
TGCAAATGCGAAGGAATGCGTAAGTTTGCTGCAGCTTCTGCTCAGTGTTGCAACGACTGC
ATCGAGAGACAAACGGCTTACCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTT
CAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCG
ACTCGCGTTATTGAAAAAGTTCTTTGTGCTCGGTGAGTGTATGTATGAGTCATCAGCAGG
GGCACGCGAAACCGTGTAATCTTCTATTCTTAACCACGGCCGGACAAAAACGCTGTTAAA
AGATAGCGGAAGGAAGGAAGTTCACTCGGTAGGGGCGTTGTGTCGTACAGTCGAAGTGGA
AGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAA
AGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCG
CCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTC
TTCGCCTGGAACGTTTCTTCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACT
GGCGCGTTCGGGAAAAACAAATCGCTCTGCGATCAGCTGGGCACGGAAAATGAAACGGAA
GAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGCCAACATCCTGATGGCAAAA
TCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGAC
CGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTAACGTACGCG
ATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTG
CTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATTC
TGCTACATTGCCGATGTGACGGTGGAGAAAACTCGCGCGACCAAAATGGCTATCGTGGAG
GCTGCCGTATTTACCGGGCTGCTGGCGGGTACGCTAAGCAGCAGCTACATACTTCGCTGG
ACGAACGGTACGACCGTGTTTGCGATCGCAGCCGGGGCCGTGTTTCTTGGCCTGATGTAC
ATAATATTCTACATCGAGGAGAGCATCAAACCGAACGAGCTGAGCGAAACGAACAACCGG
GCGCGGGAGCTGTTCCGGCTCGATTTGGTGTCGGAGCTGATGCAAACGTGCTTTAAACGG
CGCCCGAACTATGATCGTTTGATCATTTGGTTGGTAATATTAGCCCTTGCGGCCAACATC
TTCGCGATGGATGGCTCCCAAACGGTGTTTCTGCTGTTTCTCCGGGAGCGTTTCGAGTGG
ACGGTGAAGGATTACTCGTACTACGATGCGTCGGCTATCGTATTTATGATTATTGGCAAC
ACGGCGGGCCTGTACGTCATTCGCAAGCTGTTCAACCCGTCCGTCACTGTGCTGGCCGCC
CTCGGGTACTGCTGCTACGCGATCAACAGCACCATTCAAGCGCTGGCCTCAGAACCATGG
CATTTGTACATGGGCACAGCGATTTGCTTTATGAAAGGCATTGCGGGACCGATGAGCAGA
GCCGTTATCTCAAACACGGCACCGCCCAATGATATTGGTAAGATTTTCTCTCTGACAACG
TCGATTGAATCAATCACGCCGCTGTTCTCGGCCCCGCTGTACACGTTCGTATACAAGAGT
ACCCTCGCTTGGTACCCGGGCGCATTTAACCTAATCACTGCCACCGTCTACTTCACCTGC
GCGTGCCTTATGATATTTGCCAAGATTTTCCAAAGTATGTATCAAACGACTA

consensusID : consensus_8104#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 705
fasta sequence 
                              [TGTGGCGGCCAGTGTGTATGGTGCAGCGCTGTTGTTGATGTTGTAAGTGGTAAGATGCCTTTATAGACGGTCTATTGTATTAATGCATTTTGTTTGTTTGTCTTTTTTGTAATTTCAGCATCATAACGCATCTCATTAGACGGTTTTATCAGCCAGAATTGTTATTATAGATGCAAACCAAAAGAGTTTTTGGGGCCAATTATATTAAAAAAATCGTTTAATTCTCTTTTTTTTAATATTTTTCAAATGAAACATTCATACAATCAAATAAAAATTAAATAATTATTTTTTTTAATTACGCTCGCTTAATCTTACGGATACCACTGTACGCCGATCAGCTGAAGGCTGTCAAAAGGGATTACACTTTGTTTAGCGTTTGTTTTGGTCGTCCCTATTTCAGCGGGTGAAGTGGTATTGTTTTCCTTTGGTGGTAGTGGTGGTGGTGGTTGGTGGTAGTCGTAGTACTGGTCTTGGCGATGATAACAGTGTACAGCGCAAAAATATTACCACCAGCAACAGTATCGCCAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCCGG]

[-] EMBL BM648145             [TGTGGCGGCCAGTGTGTATGGTGCAGCGCTGTTGTTGATGTTGTAAGTGGTAAGATGCCTTTATAGACGGTCTATTGTATTAATGCATTTTGTTTGTTTGTCTTTTTTGTAATTTCAGCATCATAACGCATCTCATTAGACGGTTTTATCAGCCAGAATTGTTATTATAGATGCAAACCAAAAGAGTTTTTGGGGCCAATTATATTAAAAAAATCGTTTAATTCTCTTTTTTTTAATATTTTTCAAATGAAACATTCATACAATCAAATAAAAATTAAATAATTATTTTTTTTAATTACGCTCGCTTAATCTTACGGATACCACTGTACGCCGATCAGCTGAAGGCTGTCAAAAGGGATTACACTTTGTTTAGCGTTTGTTTTGGTCGTCCCTATTTCAGCGGGTGAAGTGGTATTGTTTTCCTTTGGTGGTAGTGGTGGTGGTGGTTGGTGGTAGTCGTAGTACTGGTCTTGGCGATGATAACAGTGTACAGCGCAAAAATATTACCACCAGCAACAGTATCGCCAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCCGG]




>consensus_8104#1
TGTGGCGGCCAGTGTGTATGGTGCAGCGCTGTTGTTGATGTTGTAAGTGGTAAGATGCCT
TTATAGACGGTCTATTGTATTAATGCATTTTGTTTGTTTGTCTTTTTTGTAATTTCAGCA
TCATAACGCATCTCATTAGACGGTTTTATCAGCCAGAATTGTTATTATAGATGCAAACCA
AAAGAGTTTTTGGGGCCAATTATATTAAAAAAATCGTTTAATTCTCTTTTTTTTAATATT
TTTCAAATGAAACATTCATACAATCAAATAAAAATTAAATAATTATTTTTTTTAATTACG
CTCGCTTAATCTTACGGATACCACTGTACGCCGATCAGCTGAAGGCTGTCAAAAGGGATT
ACACTTTGTTTAGCGTTTGTTTTGGTCGTCCCTATTTCAGCGGGTGAAGTGGTATTGTTT
TCCTTTGGTGGTAGTGGTGGTGGTGGTTGGTGGTAGTCGTAGTACTGGTCTTGGCGATGA
TAACAGTGTACAGCGCAAAAATATTACCACCAGCAACAGTATCGCCAGCCTCCTCCGCGA
AGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTCCTATCTCCAGCCAAGATC
GGATTAGTCGTAAAACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTA
CCGTACTCGCTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCCGG

consensusID : consensus_8104#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence 
                              [GCAGAAATCGGCCACGAGGTTGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTGTAAGTATTACTAGCAAGGCGTTGTCAAGGTTACGCGCATCTAGTAACTGTTTCCATCATTGTAGCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCTGCGATCAGCTGGGCACGGAAAATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATACTGGTACATTGGC]

[+] EMBL BX469738             [GCAGAAATCGGCCACGAGGTTGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTGTAAGTATTACTAGCAAGGCGTTGTCAAGGTTACGCGCATCTAGTAACTGTTTCCATCATTGTAGCTGCTGTCTTCGCTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCTGCGATCAGCTGGGCACGGAAAATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTTTACGGGTGCCTTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGTACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTGGTACCTGTGCGCTGATTACGGGTGTATACTGGTACATTGGC]




>consensus_8104#2
GCAGAAATCGGCCACGAGGTTGAAAGAGAGGCAACGGATGATCGGCTTCCGGTGGTTGAC
CTTGGGCCAGAACCAACCCAACCGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTG
GAACCCGCCGTACTGCTGATATTCTTCGCCTGGAACGTTTCTTGTAAGTATTACTAGCAA
GGCGTTGTCAAGGTTACGCGCATCTAGTAACTGTTTCCATCATTGTAGCTGCTGTCTTCG
CTAATCAAATCGTATACCAGACCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCTGCG
ATCAGCTGGGCACGGAAAATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAAC
CGTACTCGGCAACATCCTGATGGCAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGG
CAGCATGTTCATCGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTG
CTTTACGGGTGCCTTTTTTAACGTACGCGATCGTGGCATTGATCAGCTTGCTGTCCATGT
ACTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGATCACGACGGCGCTGTCCGGTG
GTACCTGTGCGCTGATTACGGGTGTATACTGGTACATTGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8104#0      CCGCAGCCTCCTCCGCGAAGGGTTGTTTTTATTAGCGCACTATCTCGCGCTGCGTCGTTC 60
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      TGCAAATGCGAAGGAATGCGTAAGTTTGCTGCAGCTTCTGCTCAGTGTTGCAACGACTGC 120
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      ATCGAGAGACAAACGGCTTACCCTATCTCCAGCCAAGATCGGATTAGTCGTAAAACTGTT 180
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTTTTACCGTACTCGCTGGTGCTTCG 240
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      ACTCGCGTTATTGAAAAAGTTCTTTGTGCTCGGTGAGTGTATGTATGAGTCATCAGCAGG 300
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      GGCACGCGAAACCGTGTAATCTTCTATTCTTAACCACGGCCGGACAAAAACGCTGTTAAA 360
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      AGATAGCGGAAGGAAGGAAGTTCACTCGGTAGGGGCGTTGTGTCGTACAGTCGAAGTGGA 420
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------TGTGGCGGCCAGTGTGTA 18
                                                                                  

consensus_8104#0      AGATCTTCTGTGGACAAAGGCAACACTTGATGTAGTACGGCCGGACCGAAAATGGACGAA 480
consensus_8104#2      ----------------------------------GCAGAAATCGGCCACGA--GGTTGAA 24
consensus_8104#1      TGGTGCAGCGCTGTTGTTGATGTTGTAAGTGGTAAGATGCCTTTATAGACGGTCTATTGT 78
                                                          *                       

consensus_8104#0      AGAGAGGCAAC--GGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAAC 538
consensus_8104#2      AGAGAGGCAAC--GGATGATCGGCTTCCGGTGGTTGACCTTGGGCCAGAACCAACCCAAC 82
consensus_8104#1      ATTAATGCATTTTGTTTGTTTGTCTTTT--TTGTAATTTCAGCATCATAACGCATCTCAT 136
                      *   * ***    *  ** * * ***    * **       *   ** ***  * *  * 

consensus_8104#0      CGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATAT 598
consensus_8104#2      CGCCCAGGCTGGAGCGAAAGTATCGATATTTAATCCTGGAACCCGCCGTACTGCTGATAT 142
consensus_8104#1      TAGACGGTTTTATCAGCCAGAATTGTTATTATAGATGCAAACCAAAAGAGTTTTTGGGGC 196
                          * *  *     *  ** ** * ****  *      ****    *   *  **    

consensus_8104#0      TCTTCGCCTGGAACGTTTCTT--------------------------------------- 619
consensus_8104#2      TCTTCGCCTGGAACGTTTCTTGTAAGTATTACTAGCAAGGCGTTGTCAAGGTTACGCGCA 202
consensus_8104#1      CAATTATATTAAAAAAATCGTTTA------------------------------------ 220
                         *    *  **    ** *                                       

consensus_8104#0      --------------------------CTGCTGTCTTCGCTAAT-CAAATCGTATACCAGA 652
consensus_8104#2      TCTAGTAACTGTTTCCATCATTGTAGCTGCTGTCTTCGCTAAT-CAAATCGTATACCAGA 261
consensus_8104#1      --------------------------ATTCTCTTTTTTTTAATATTTTTCAAATGAAACA 254
                                                 * ** * **   ****     **  **   * *

consensus_8104#0      CCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCT-------GCGATCAGCTGGGC--A 703
consensus_8104#2      CCTGTACTGGCGCGTTCGGGAAAAACAAATCGCTCT-------GCGATCAGCTGGGC--A 312
consensus_8104#1      TTCATACAATCAAATAAAAATTAAATAATTATTTTTTTTAATTACGCTCGCTTAATCTTA 314
                          ***   *   *       *** ** *   * *        ** **   *   *  *

consensus_8104#0      CGGAAA--ATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGC 761
consensus_8104#2      CGGAAA--ATGAAACGGAAGAGATCCAACAGCTGGAAAAAGCGATCCAACCGTACTCGGC 370
consensus_8104#1      CGGATACCACTGTACGCCGATCAGCTGAAGGCTGTCAAAAGGGATTACACTTTGTTTAGC 374
                      **** *  *    ***      * *  *  ****  ***** ***   **  *  *  **

consensus_8104#0      CAACATCCTGATGG---CAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCA- 817
consensus_8104#2      -AACATCCTGATGG---CAAAATCGCTGGTCGAATCGATCATCCCGGCACTGGGCAGCA- 425
consensus_8104#1      GTTTGTTTTGGTCGTCCCTATTTCAGCGGGTGAAGTGGTATTGTTTTCCTTTGGTGGTAG 434
                           *  ** * *   * *  **   **  ***  * *  *     *  * **  * * 

consensus_8104#0      TGTTCAT--CGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTT 875
consensus_8104#2      TGTTCAT--CGGTCCGTGGTCGGACCGGTACGGCCGCAAGCCGGTGATAGTGTCGTGCTT 483
consensus_8104#1      TGGTGGTGGTGGTTGGTGGTAGTCGTAGTACTGGT-CTTGGCGATGATAACAGTGTACAG 493
                      ** *  *   ***  ***** *     **** *   *  * ** *****     ** *  

consensus_8104#0      TACGGGTGCCTTTTT-AACGTA-CGCGATCGTGGCATTGATCAGCTTGCTGTC-CATGTA 932
consensus_8104#2      TACGGGTGCCTTTTTTAACGTA-CGCGATCGTGGCATTGATCAGCTTGCTGTC-CATGTA 541
consensus_8104#1      CGCAAAAATATTACCACCAGCAACAGTATCGCCAGCCTCCTCCGCGAAGGGTTGTTTTTA 553
                        *       **       * * *   ****      *  ** **     **    * **

consensus_8104#0      CTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGA-TCACGACGGCGCTGTCCGGTG 991
consensus_8104#2      CTACACCATCAACCCGTGGTACTATGTGCTTGCCTCGA-TCACGACGGCGCTGTCCGGTG 600
consensus_8104#1      TTAGCGCACTATCTCGCGCTGCGTCGTTCCTATCTCCAGCCAAGATCGGATTAGTCGTAA 613
                       **   **  * * ** * * *   ** * *  *** *  ** **  *   *   **   

consensus_8104#0      GTACCTGTGCGCTGATTACGGGTGTATTCTGCTACATTGCCGATGTGACGGTGGAGAAAA 1051
consensus_8104#2      GTACCTGTGCGCTGATTACGGGTGTATACTGGTACATTGGC------------------- 641
consensus_8104#1      --AACTGTTCAATAGTTGCGGAGCTAAACAGTACTAACTCCCACTT--TTACCGTACTCG 669
                        * **** *  *  ** ***   **  * *    *    *                   

consensus_8104#0      CTCGCGCGACCAAAATGGCTATCGTGGAGGCTGCCGTATTTACCGGGCTGCTGGCGGGTA 1111
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      CTGGTGCTTCGACTCGCGTTATTGAAAAAGTTCCGG------------------------ 705
                                                                                  

consensus_8104#0      CGCTAAGCAGCAGCTACATACTTCGCTGGACGAACGGTACGACCGTGTTTGCGATCGCAG 1171
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CCGGGGCCGTGTTTCTTGGCCTGATGTACATAATATTCTACATCGAGGAGAGCATCAAAC 1231
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CGAACGAGCTGAGCGAAACGAACAACCGGGCGCGGGAGCTGTTCCGGCTCGATTTGGTGT 1291
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CGGAGCTGATGCAAACGTGCTTTAAACGGCGCCCGAACTATGATCGTTTGATCATTTGGT 1351
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      TGGTAATATTAGCCCTTGCGGCCAACATCTTCGCGATGGATGGCTCCCAAACGGTGTTTC 1411
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      TGCTGTTTCTCCGGGAGCGTTTCGAGTGGACGGTGAAGGATTACTCGTACTACGATGCGT 1471
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CGGCTATCGTATTTATGATTATTGGCAACACGGCGGGCCTGTACGTCATTCGCAAGCTGT 1531
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      TCAACCCGTCCGTCACTGTGCTGGCCGCCCTCGGGTACTGCTGCTACGCGATCAACAGCA 1591
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CCATTCAAGCGCTGGCCTCAGAACCATGGCATTTGTACATGGGCACAGCGATTTGCTTTA 1651
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      TGAAAGGCATTGCGGGACCGATGAGCAGAGCCGTTATCTCAAACACGGCACCGCCCAATG 1711
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      ATATTGGTAAGATTTTCTCTCTGACAACGTCGATTGAATCAATCACGCCGCTGTTCTCGG 1771
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      CCCCGCTGTACACGTTCGTATACAAGAGTACCCTCGCTTGGTACCCGGGCGCATTTAACC 1831
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      TAATCACTGCCACCGTCTACTTCACCTGCGCGTGCCTTATGATATTTGCCAAGATTTTCC 1891
consensus_8104#2      ------------------------------------------------------------
consensus_8104#1      ------------------------------------------------------------
                                                                                  

consensus_8104#0      AAAGTATGTATCAAACGACTA 1912
consensus_8104#2      ---------------------
consensus_8104#1      ---------------------


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)