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Anopheles gambiae
cluster # 8108 cluster # 8108       Sequences # 9       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8108#0 length = 980 sequences # 1  
consensus_8108#1 length = 919 sequences # 2  
consensus_8108#2 length = 804 sequences # 4  
consensus_8108#3 length = 607 sequences # 1  
consensus_8108#4 length = 510 sequences # 1  

consensusID : consensus_8108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 980
fasta sequence
                              [GGCAGAATTCGGCACGATGGTCAAATCGATCCTCAAAAATGGCCCCATCTCACGCGCCTTACTCGGTTAACAAAAGCCCCAAGGAGTATGACGAGTACAAGTTCACCCTACCAGCTCTGTACCGTGAGCTGGCCAAAGAGGAGCTCCGAGAAGATGATGTCGTGCGTGAGAAAGCCCTAACGGAGATGCGCCACTGGATCGCGGTAAACCCTTACATCTTCAAGTGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTTCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAGCGCTATCTAACCGTTCGCGAGCTGTATCCAAGTTGGTTCAAAAATCTCGACTGCAATGAATCGACCATGAAGGAAATTTTCCACAGCGGCACGTTCACGTTGCTCGGCTGGGACGCTGCCGGACGGATGGTGGGATTTTCGCGCTTCAGTCGCTTCGATGGTGAAAAGCACAGCCCCGCACAGGATGCACGCTTTATGGCGCTGGTCATGGAGACGATGCTCGAGTGCGAGGAGTTCCAGGTAGGCGGATGTCACGTGCTGATCGACTTTGAGGGCAGCACGGTGGCCAACTTTTGAGAAAGTGGAGTACGACCGGATTGAAAGGATCATTGATTGGATGCGTTACCAGGGCCACACGGTACCCCACCTTCCGGGTATNGCGGGAACATTCANTTCCGGCCAGGGGTCTGCCNAAAGGTTATGGGTAAGCTCCGTTATACGNAAAGGTTTCTAGTCAGTTCGGGAAACCCCGGAAGNATTNCGGGGNAAAAAATTAGNTGCTTTTCAACGGGTGCTGAAANTTGGGCCAAGNNTTTCTGGAAGGCTCCTTTTAAAGGCCTGGACTTGTAACCGGGGGAAACGGGTCACAATCTTGAGGCGCTGGCGAAATCTCGGGGTCTCGGGAAACACGTTTGAGGACACACGNAGNNGCACCGGGCTGTGATACAGANTGAG]

[+] EMBL BX467779             [GGCAGAATTCGGCACGATGGTCAAATCGATCCTCAAAAATGGCCCCATCTCACGCGCCTTACTCGGTTAACAAAAGCCCCAAGGAGTATGACGAGTACAAGTTCACCCTACCAGCTCTGTACCGTGAGCTGGCCAAAGAGGAGCTCCGAGAAGATGATGTCGTGCGTGAGAAAGCCCTAACGGAGATGCGCCACTGGATCGCGGTAAACCCTTACATCTTCAAGTGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTTCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAGCGCTATCTAACCGTTCGCGAGCTGTATCCAAGTTGGTTCAAAAATCTCGACTGCAATGAATCGACCATGAAGGAAATTTTCCACAGCGGCACGTTCACGTTGCTCGGCTGGGACGCTGCCGGACGGATGGTGGGATTTTCGCGCTTCAGTCGCTTCGATGGTGAAAAGCACAGCCCCGCACAGGATGCACGCTTTATGGCGCTGGTCATGGAGACGATGCTCGAGTGCGAGGAGTTCCAGGTAGGCGGATGTCACGTGCTGATCGACTTTGAGGGCAGCACGGTGGCCAACTTTTGAGAAAGTGGAGTACGACCGGATTGAAAGGATCATTGATTGGATGCGTTACCAGGGCCACACGGTACCCCACCTTCCGGGTATNGCGGGAACATTCANTTCCGGCCAGGGGTCTGCCNAAAGGTTATGGGTAAGCTCCGTTATACGNAAAGGTTTCTAGTCAGTTCGGGAAACCCCGGAAGNATTNCGGGGNAAAAAATTAGNTGCTTTTCAACGGGTGCTGAAANTTGGGCCAAGNNTTTCTGGAAGGCTCCTTTTAAAGGCCTGGACTTGTAACCGGGGGAAACGGGTCACAATCTTGAGGCGCTGGCGAAATCTCGGGGTCTCGGGAAACACGTTTGAGGACACACGNAGNNGCACCGGGCTGTGATACAGANTGAG]


>consensus_8108#0 GGCAGAATTCGGCACGATGGTCAAATCGATCCTCAAAAATGGCCCCATCTCACGCGCCTT ACTCGGTTAACAAAAGCCCCAAGGAGTATGACGAGTACAAGTTCACCCTACCAGCTCTGT ACCGTGAGCTGGCCAAAGAGGAGCTCCGAGAAGATGATGTCGTGCGTGAGAAAGCCCTAA CGGAGATGCGCCACTGGATCGCGGTAAACCCTTACATCTTCAAGTGCCGCACGGATGCCA AGTTCTTGCTCCGATTCCTTCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGC TGGAGCGCTATCTAACCGTTCGCGAGCTGTATCCAAGTTGGTTCAAAAATCTCGACTGCA ATGAATCGACCATGAAGGAAATTTTCCACAGCGGCACGTTCACGTTGCTCGGCTGGGACG CTGCCGGACGGATGGTGGGATTTTCGCGCTTCAGTCGCTTCGATGGTGAAAAGCACAGCC CCGCACAGGATGCACGCTTTATGGCGCTGGTCATGGAGACGATGCTCGAGTGCGAGGAGT TCCAGGTAGGCGGATGTCACGTGCTGATCGACTTTGAGGGCAGCACGGTGGCCAACTTTT GAGAAAGTGGAGTACGACCGGATTGAAAGGATCATTGATTGGATGCGTTACCAGGGCCAC ACGGTACCCCACCTTCCGGGTATNGCGGGAACATTCANTTCCGGCCAGGGGTCTGCCNAA AGGTTATGGGTAAGCTCCGTTATACGNAAAGGTTTCTAGTCAGTTCGGGAAACCCCGGAA GNATTNCGGGGNAAAAAATTAGNTGCTTTTCAACGGGTGCTGAAANTTGGGCCAAGNNTT TCTGGAAGGCTCCTTTTAAAGGCCTGGACTTGTAACCGGGGGAAACGGGTCACAATCTTG AGGCGCTGGCGAAATCTCGGGGTCTCGGGAAACACGTTTGAGGACACACGNAGNNGCACC GGGCTGTGATACAGANTGAG



consensusID : consensus_8108#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 919
fasta sequence
                              [AGAATCCGCACGAGNGATGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCGACTATCGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACGAGCGAGCTGAAGATCATGATGGACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCGAAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCAAAGCTACGAGAAAAGATCAACTGCGTATCCAACGATCGAGGAGCTTGAGAAGCGTTTAGAGCCTGCCTGCGAAACCGACCACTTACGGCGGCACGGTAGACTTCGAGGAGCTTAACCGTTCGTTCCGCAAGCGCATCGAAGAGCAGCGAGAGATCGTGCTCGGGCTCGATGGCATGGCGATTGATGTGGACCATTATACGTCGGTTTGGGATGCGGAGGAAGTTTTGCCTGAGGCGGCAGCTGCAGGAACTATGTTGGAACAATTGAACATCAAATGAGACAATTTCCAAAGCATTGCTTCAGAGGTTTATATTCGAAATTGAGAAATTAAACATGACAACACTTTCGATAGGAATTTATAAATAAAGATGTTCTGAATTATTTGGTGTCTCACTCTGAGGAATCTTTTTGGAGAAGCATTTTATTTAAAAAAAATAAATGTATTGTTTCG]

[+] EMBL BX466246             [AGAATCCGCACGAGNGATGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCGACTATCGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACGAGCGAGCTGAAGATCATGATGGACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCGAAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCAAAGCTACGAGAAAAGATCAACTGCGTATCCAACGATCGAGGAGCTTGAGAAGCGTTTAGAGCCTGCCTGCGAAACCGACCACTTACGGCG                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX623534             [                                                                                                                                                                                                                                                                                                                                                                  ATGATGGACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCGAAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCAAAGCTACGAGAAAAGATCAACTGC TATCCAACGATCGAGGAGCTTGAGAAGCGTTTAGAGCCTGCCTGC AAACCGACCACTTACGGCGGCACGGTAGACTTCGAGGAGCTTAACCGTTCGTTCCGCAAGCGCATCGAAGAGCAGCGAGAGATCGTGCTCGGGCTCGATGGCATGGCGATTGATGTGGACCATTATACGTCGGTTTGGGATGCGGAGGAAGTTTTGCCTGAGGCGGCAGCTGCAGGAACTATGTTGGAACAATTGAACATCAAATGAGACAATTTCCAAAGCATTGCTTCAGAGGTTTATATTCGAAATTGAGAAATTAAACATGACAACACTTTCGATAGGAATTTATAAATAAAGATGTTCTGAATTATTTGGTGTCTCACTCTGAGGAATCTTTTTGGAGAAGCATTTTATTTAAAAAAAATAAATGTATTGTTTCG]


>consensus_8108#1 AGAATCCGCACGAGNGATGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCG GGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAA CCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGT CGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTG GAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCGACTAT CGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACGAGCGAGCTGAAGATCATGATG GACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCG AAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCAAAGCTACGAGAA AAGATCAACTGCGTATCCAACGATCGAGGAGCTTGAGAAGCGTTTAGAGCCTGCCTGCGA AACCGACCACTTACGGCGGCACGGTAGACTTCGAGGAGCTTAACCGTTCGTTCCGCAAGC GCATCGAAGAGCAGCGAGAGATCGTGCTCGGGCTCGATGGCATGGCGATTGATGTGGACC ATTATACGTCGGTTTGGGATGCGGAGGAAGTTTTGCCTGAGGCGGCAGCTGCAGGAACTA TGTTGGAACAATTGAACATCAAATGAGACAATTTCCAAAGCATTGCTTCAGAGGTTTATA TTCGAAATTGAGAAATTAAACATGACAACACTTTCGATAGGAATTTATAAATAAAGATGT TCTGAATTATTTGGTGTCTCACTCTGAGGAATCTTTTTGGAGAAGCATTTTATTTAAAAA AAATAAATGTATTGTTTCG



consensusID : consensus_8108#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 804
fasta sequence
                              [CCGGTGTTCACTTGTCCCGAAGCCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCGACTATCGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACGAGCGAGCTGAAGATCATGATGGACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCGAAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCNAAGCTACGAGAAAAGATCAACTGCTATCCAACGATCGANGAGCTTGAGAAGCGTTTANAGCCTGCCTGCAAACCG]

[+] EMBL BM637104             [CCGGTGTTCACTTGTCCCGAAGCCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCACTGTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCGTGAAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAGCGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTCACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCG                                                                                                                                                                                                                                                        ]
[+] EMBL BX628118             [           TTGTCCCGAAGCCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCGACTATCGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACGAGCGAGCTGAAGATCATGATG                                                                                                                                                                                       ]
[+] EMBL BX628126             [              TCCCGAAGCCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAANAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX628075             [                                                         AAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGTTTGTCGACTATCGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACGAGCGAGCTGAAGATCATGATGGACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCGAAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCNAAGCTACGAGAAAAGATCAACTGCTATCCAACGATCGANGAGCTTGAGAAGCGTTTANAGCCTGCCTGCAAACCG]


>consensus_8108#2 CCGGTGTTCACTTGTCCCGAAGCCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAG TGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCC AAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCAC TGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGA TTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTA ACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATG CAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCGGGCCGGGCG GCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCT CGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGC TGTCAGGTGTTTGTCGACTATCGGGGCTGCACCGTCGGACACTTTGACAAGTGGAGCACG AGCGAGCTGAAGATCATGATGGACGTGTTCAGCCGCTCGTACCCTTTGCGGTATGGTGAA ATTCACGGAGCAAAGCTACCGAAGCAGGCCGTGCCAATTATTGAGACGTTTCTTTCGTTC GCTAACCCNAAGCTACGAGAAAAGATCAACTGCTATCCAACGATCGANGAGCTTGAGAAG CGTTTANAGCCTGCCTGCAAACCG



consensusID : consensus_8108#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 607
fasta sequence
                              [GAATTGCCACGAGGNGATTGCGGAAAACCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCTGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGGTTTGTCGCACTACTCGCGCGGCCTGCACCGCTCGGNACACCTTCTGCACACACGCCTGGCACGCACGCACNCGAGCCCTGANANCATCACTGACTGCGACCCGCCTGCTTCCAAGCCCCCGCCCTCCGCNTTACCCCCCCTCTCTGNCCCGCGCCACCTGCGCTCGCACACACCTTCCACCGCGCCACGCCCACACAACGNCCCTCAACCCCGCACAACCCCAC]

[+] EMBL AL931214             [GAATTGCCACGAGGNGATTGCGGAAAACCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGTGCTGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTTCCAGATCGGTAGCTGTCAGGTGGTTTGTCGCACTACTCGCGCGGCCTGCACCGCTCGGNACACCTTCTGCACACACGCCTGGCACGCACGCACNCGAGCCCTGANANCATCACTGACTGCGACCCGCCTGCTTCCAAGCCCCCGCCCTCCGCNTTACCCCCCCTCTCTGNCCCGCGCCACCTGCGCTCGCACACACCTTCCACCGCGCCACGCCCACACAACGNCCCTCAACCCCGCACAACCCCAC]


>consensus_8108#3 GAATTGCCACGAGGNGATTGCGGAAAACCTTACATCTTCAAATGCCGCACGGATGCCAAG TTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTG GAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGTAAC GATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGACAGT GCTGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCC GTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGAGTGGGAAGAGTT CCAGATCGGTAGCTGTCAGGTGGTTTGTCGCACTACTCGCGCGGCCTGCACCGCTCGGNA CACCTTCTGCACACACGCCTGGCACGCACGCACNCGAGCCCTGANANCATCACTGACTGC GACCCGCCTGCTTCCAAGCCCCCGCCCTCCGCNTTACCCCCCCTCTCTGNCCCGCGCCAC CTGCGCTCGCACACACCTTCCACCGCGCCACGCCCACACAACGNCCCTCAACCCCGCACA ACCCCAC



consensusID : consensus_8108#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 510
fasta sequence
                              [CAGGAATNTGTCACTTGTCCGAAGCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGACGTGGGAAGAGTTCCAGA]

[+] EMBL AL697459             [CAGGAATNTGTCACTTGTCCGAAGCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCTAACCGTTCGCGAGCTGTACCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGACGTGGGAAGAGTTCCAGA]


>consensus_8108#4 CAGGAATNTGTCACTTGTCCGAAGCATGGCAGCTAATCAACTTCCCTTTGCGGTGGACAA GTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTTACCGTGAAGTAGC CAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCACCGAGATGCGCCA CTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCCAAGTTCTTGCTCCG ATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCGCTGGAACGCTATCT AACCGTTCGCGAGCTGTACCGGGCTGGTTCAAGAAGCTGGACTGTAACGATCCCATCATG CAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCGTTCCTTATCCGATTCGGTCG GTTCAACATCGAAAAGCATAGCCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGA GACGGTGCTCGACGTGGGAAGAGTTCCAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8108#0      GGCAGAATTCGGCACGATGGTCAAATCGATCCTCAAAAATGGCCCCATCTCACGCGCCTT 60
consensus_8108#4      ------------CAGGAATNTGTCACTTGTCCG-AAGCATGGCAGCTAATCAACTTCCCT 47
consensus_8108#2      -------------CCGGTGTTCAC-TTGTCCCGAAGCCATGGCAGCTAATCAACTTCCCT 46
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      ------------------------------------------------------------
                                                                                  

consensus_8108#0      ACTCGGTTAACAAAAGCCCCAAGGAGTATGACGAGTACAAGTTCACCCTACCAGCTCTGT 120
consensus_8108#4      TTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTT 107
consensus_8108#2      TTGCGGTGGACAAGTGTCCCAAGGAGTATGACGAGTACAAGTTCACTCTGCCAGCTCTTT 106
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      ------------------------------------------------------------
                                                                                  

consensus_8108#0      ACCGTGAGCTGGCCAAAGAGGAGCTCCGAGAAGATGATGTCGTGCGTGAGAAAGCCCTAA 180
consensus_8108#4      ACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCA 167
consensus_8108#2      ACCGTGAAGTAGCCAAAGAGGAGCTCCGGGAAGATGATCTCGTGCTTGTAAAGGCCCTCA 166
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      ------------------------------------------------------------
                                                                                  

consensus_8108#0      CGGAGATGC-GCCACTGGATCGCGGTAAACCCTTACATCTTCAAGTGCCGCACGGATGCC 239
consensus_8108#4      CCGAGATGC-GCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCC 226
consensus_8108#2      CCGAGATGC-GCCACTGGATTGCGGAAAACCCTTACATCTTCAAATGCCGCACGGATGCC 225
consensus_8108#3      --GAATTGCCACGAGGNGATTGCGGAAAACC-TTACATCTTCAAATGCCGCACGGATGCC 57
consensus_8108#1      ------------------------------------------------------------
                                                                                  

consensus_8108#0      AAGTTCTTGCTCCGATTCCTTCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCG 299
consensus_8108#4      AAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCG 286
consensus_8108#2      AAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCG 285
consensus_8108#3      AAGTTCTTGCTCCGATTCCTGCGCTTCCGTCAGTTCTCCGTACCGATGGCGTGTGAGGCG 117
consensus_8108#1      --------------------------------AGAATCCGCACGAGNGA----TGAGGCG 24
                                                          **** **    *     *******

consensus_8108#0      CTGGAGCGCTATCTAACCGTTCGCGAGCTGTATCCAAGTTGGTTCAAAAATCTCGACTGC 359
consensus_8108#4      CTGGAACGCTATCTAACCGTTCGCGAGCTGTA-CCGGGCTGGTTCAAGAAGCTGGACTGT 345
consensus_8108#2      CTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGT 345
consensus_8108#3      CTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGT 177
consensus_8108#1      CTGGAACGCTATCTAACCGTTCGCGAGCTGTACCCGGGCTGGTTCAAGAAGCTGGACTGT 84
                      ***** ************************** **  * ******** ** ** ***** 

consensus_8108#0      AATGAATCGACCATGAAGGAAATTTTCCACAGCGGCACGTTCACGTTGCTCGGCTGGGAC 419
consensus_8108#4      AACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGC------ 399
consensus_8108#2      AACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGAC 405
consensus_8108#3      AACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGAC 237
consensus_8108#1      AACGATCCCATCATGCAGGAAATATTGGACTACGAACCGTTTACCTACATCGGCCAGGAC 144
                      ** **  * * **** ******* **  **  **   **** ** *   *****      

consensus_8108#0      GCTGCCGGAC-GGATGGTGGGATTTTCGCGCTTCAGTCGCTTCGATGGTGAAAAGCACAG 478
consensus_8108#4      GTTCC------------------TTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAG 441
consensus_8108#2      AGTGCGGGCC-GGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAG 464
consensus_8108#3      AGTGCTGGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAG 297
consensus_8108#1      AGTGC-GGGCCGGGCGGCGTTCCTTATCCGATTCGGTCGGTTCAACATCGAAAAGCATAG 203
                        * *                  **   ** *** **** *** *    ******** **

consensus_8108#0      CCCCGCACAGGATGCACGCTTTATGGCGCTGGTCATGGAGACGATGCTCGA-GTGCGAGG 537
consensus_8108#4      CCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGACGTGGGAAG 501
consensus_8108#2      CCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGA-GTGGGAAG 523
consensus_8108#3      CCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGA-GTGGGAAG 356
consensus_8108#1      CCCGTCGCAGGACGCTCGGTACATGGCACTGATACTGGAGACGGTGCTCGA-GTGGGAAG 262
                      ***  * ***** ** ** *  ***** *** *  ******** ******* *** ** *

consensus_8108#0      AGTTCCAGGTAGGCGGATGTCACGTG-CTGATCG----ACTT-TGAGGGCAGCACGG-TG 590
consensus_8108#4      AGTTCCAGA--------------------------------------------------- 510
consensus_8108#2      AGTTCCAGATCGGTAGCTGTCAGGTG-TTTGTCG----ACTA-TCGGGGCTGCACCG-TC 576
consensus_8108#3      AGTTCCAGATCGGTAGCTGTCAGGTGGTTTGTCGCACTACTCGCGCGGCCTGCACCGCTC 416
consensus_8108#1      AGTTCCAGATCGGTAGCTGTCAGGTG-TTTGTCG----ACTA-TCGGGGCTGCACCGTCG 316
                      ********                                                    

consensus_8108#0      GCCAACTTTTGAGAAAGTGGAGTACGACCGGATTGAAAGGATCATTGATTGGATGCGTTA 650
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      GGACACTTT--GACAAGTGGAGCACGAGCGAGCTGAA--GATCATGA--TGGACGTGTTC 630
consensus_8108#3      GGNACACCTTCTGCACACACGCCTGGCACGCACGCACNCGAGCCCTGANANCATCACTGA 476
consensus_8108#1      GACACTTTG---ACAAGTGGAGCACGAGCGAGCTGAA--GATCATGA--TGGACGTGTTC 369
                                                                                  

consensus_8108#0      CCAGGGCCACACGGTACCCCACCTTCCGGGTATNGCGGGAACATTCANTTCCGGCCAGGG 710
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ----AGCCGCTCG-TACC----CTTTGCGGTATGGTGA--------AATTCACGGAGCAA 673
consensus_8108#3      CTGCGACCCGCCTGCTTCCAAGCCCCCGCCCTCCGCNTTACCCCCCCTCTCTGNCCCGCG 536
consensus_8108#1      AGCCGCTCGTACCCTTTGCGGTATGGTGAAATTCACGGAGCAAAGCTACCGAAGCAGGCC 429
                                                                                  

consensus_8108#0      --GTCTGCCNAAAGGTTATGGGTAAGCTCCGTTATACGNAAAGGTTTCTAG----TCAGT 764
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      --AGCTACCGAA---------GCAGGCCGTGCCAATTATTGAGACGTTTCT----TTCGT 718
consensus_8108#3      CCACCTGCGCTCGCACACACCTTCCACCGCGCCACGCCCACACAACGNCCC----TCAAC 592
consensus_8108#1      GTGCCAATTATTGAGACGTTTCTTTCGTTCGCTAACCCAAAGCTACGAGAAAAGATCAAC 489
                                                                                  

consensus_8108#0      TCGGGAAACCCCGGAAGNATTNCGGGGNAAAAAATTAGNTGCTTTTC-----AACGGGTG 819
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      TCGCTAACCCNAAG-------CTACGAGAAAAGATCAACTGCTATCC-----AACGATCG 766
consensus_8108#3      CCCGCACAACCCCAC--------------------------------------------- 607
consensus_8108#1      TGCGTATCCAACGATCGAGGAGCTTGAGAAGCGTTTAGAGCCTGCCTGCGAAACCGACCA 549
                                                                                  

consensus_8108#0      CTGAAANTTGGGCCAAGNNTTTCTGGAAGGCT------CCTTTTAAAGGCCTGGACTTGT 873
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ANGAGCTTGAG---AAGCGTTT---ANAGCCT------GCCTGCAAACCG---------- 804
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      CTTACGGCGGCACGGTAGACTTCGAGGAGCTTAACCGTTCGTTCCGCAAGCGCATCGAAG 609
                                                                                  

consensus_8108#0      AACCGGGGGAAACGGGTCACAATCTTGAGGCGCTGGCGAAATCTCGGGGTCTCGGGAAAC 933
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ------------------------------------------------------------
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      AGCAGCGAGAGATCGTGCTCGGGCTCGATGGCATGGCGATTGATGTGGACCATTATACGT 669
                                                                                  

consensus_8108#0      ACGTTTGAGG-ACACACGNAGNNGCACCGGGCTGTGATACAGANTGAG------------ 980
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ------------------------------------------------------------
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      CGGTTTGGGATGCGGAGGAAGTTTTGCCTGAGGCGGCAGCTGCAGGAACTATGTTGGAAC 729
                                                                                  

consensus_8108#0      ------------------------------------------------------------
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ------------------------------------------------------------
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      AATTGAACATCAAATGAGACAATTTCCAAAGCATTGCTTCAGAGGTTTATATTCGAAATT 789
                                                                                  

consensus_8108#0      ------------------------------------------------------------
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ------------------------------------------------------------
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      GAGAAATTAAACATGACAACACTTTCGATAGGAATTTATAAATAAAGATGTTCTGAATTA 849
                                                                                  

consensus_8108#0      ------------------------------------------------------------
consensus_8108#4      ------------------------------------------------------------
consensus_8108#2      ------------------------------------------------------------
consensus_8108#3      ------------------------------------------------------------
consensus_8108#1      TTTGGTGTCTCACTCTGAGGAATCTTTTTGGAGAAGCATTTTATTTAAAAAAAATAAATG 909
                                                                                  

consensus_8108#0      ----------
consensus_8108#4      ----------
consensus_8108#2      ----------
consensus_8108#3      ----------
consensus_8108#1      TATTGTTTCG 919
                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)