Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8169 cluster # 8169       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8169#0 length = 1948 sequences # 7  
consensus_8169#1 length = 711 sequences # 1  
consensus_8169#2 length = 667 sequences # 1  

consensusID : consensus_8169#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1948
fasta sequence
                              [CCGGCTCGAGAAGGAGCTGAAGAAGCGCATCATCGAGAACGGTATACTGCGGGGCAAGCTGACGGAGGTCGAGAGTGAGCCGCAGACACCGGAAGCGCAGGAGAAGCTGGACGAGCTGGTGCGCGGCCTGCAGCGCACCGAGAGTGTGGTGCTGCGCGAGAAGGTGAAGGAGCTGGAGGGTGACTCGGAAGCGTCCGAGCGCAACGGTGAGCTGGAGCGCGAGCTGAAGAAGAAGAACATTGAGAGCGATATACTGCGCTCGAAGCTGAAGCAGTTCGAAAACACGCCCTCGAACGCACAGGAAGCCAACGAGCGGATGCGCGATCTGGAGAAGCAGGTCAAGAAGTACCAGATCGAGGCGGACATTCTGC-GGGCGAAGGTGAGCCAGCTGGAGAGCGATGCGGCGACGCGCGAGGACGAAGAATCGACCGAGCGGATCGAGGAGCTGGAGAAGGGGCTGAAGAAAAGCACCACCGAGGGCAACATGCTGCGGGCGAAGATGCAGATGTTTGAGAAGGAGTCGACGGCCACGCAGGACTCGAACAGCGAGCAGATCGAGGAGCTGCGCAAGGGGCTGAAGAAGAGCACGACCGAGAGCCAAATACTGCGCTCGAAGC-TGACCGAGATGGAGAGCAAACAGGTGCACAGCGGGGCGAGCAGCTACAAGATCGAAACGCTCGAGCAGGAGCTCAAGAAGAAAAACATCGAGAACGACATCCTGCGGTCGAAGGTGGAGCAGCTAGAGCGCGTACCGCTGGCGGACAGCCCGGCCAACGAGAAGATCGAGGAGCTGCAGAAGGAGATCCGCAATCTGAAGATCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGGACGAACCGACCACCACGCAGGAATCGACCGATCGCATCAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGAGAGCGACATCCTGCGGGCGAAGGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGATAGAGGATCTGGAGAGCGAGCTGAAGAAGAAGACGCTCG-AGAACGACATCCTCAAGT-CGAAGGTGAGCCAGCTGGAGGGCGAAGTGAT-TGCGCACTCCGGTGGCAGCAAGGCGG--ACCCGAACGAGATCAAGA-AGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAGGAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCA-GATCCGGGCGCTGC-AGAAT-CA-GATCGA-AAACATCAAGGAGGTGGTGGCGGT-CACCAAGGAC-ATGCTGAACATCCGC-AACATGG-AGCA-CG-AGCAGCTGCAGACGCGGTTCGAGAACATTGACGGCAAGATGAAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATGTACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGAAAACGGCGGATCGAGCTGGGATTGATTTTCCATGCTTGAAAAAAACTGCACATACAAAGAAATGATTCAAACCACTGACCAAACTATATCAACGGACGTGTGTGTGTGTGTCACTCTCTCTCTCTCTATTATCACCCGTGCGCCCACTAAATCATTCTTGCACTACTCGCTTACGTTCTTAATATCTTATTATATAGTTTTAGTACAATATCTTACGATAACAACACTCCACACACGCAAAGAAAGTGAGGAAATCCAGAAAAATTACGCCGAAAAGATCGAACTCATCAAGGAGGAAATCGAATCCGTCCGGAATGGTGCCAAAAATTGATACATCCTCCTCCTCCTCCTACCGGCAGGACCAGCAGCTGCCGACCGTAACCGTGGAAGATCACTTGCGGAGCGAGCTGGGAAGGGCGATCGTGCTGCTGCATTGTGCAATAGCAACAGCAACAGCAACAACAAGCTTCCTTCCCCTA]

[+] EMBL BM576742             [CCGGCTCGAGAAGGAGCTGAAGAAGCGCATCATCGAGAACGGTATACTGCGGGGCAAGCTGACGGAGGTCGAGAGTGAGCCGCAGACACCGGAAGCGCAGGAGAAGCTGGACGAGCTGGTGCGCGGCCTGCAGCGCACCGAGAGTGTGGTGCTGCGCGAGAAGGTGAAGGAGCTGGAGGGTGACTCGGAAGCGTCCGAGCGCAACGGTGAGCTGGAGCGCGAGCTGAAGAAGAAGAACATTGAGAGCGATATACTGCGCTCGAAGCTGAAGCAGTTCGAAAACACGCCCTCGAACGCACAGGAAGCCAACGAGCGGATGCGCGATCTGGAGAAGCAGGTCAAGAAGTACCAGATCGAGGCGGACATTCTGC GGGCGAAGGTGAGCCAGCTGGAGAGCGATGCGGCGACGCGCGAGGACGAAGAATCGACCGAGCGGATCGAGGAGCTGGAGAAGGGGCTGAAGAAAAGCACCACCGAGGGCAACATGCTGCGGGCGAAGATGCAGATGTTTGAGAAGGAGTCGACGGCCACGCAGGACTCGAACAGCGAGCAGATCGAGGAGCTGCGCAAGGGGCTGAAGAAGAGCACGACCGAGAGCCAAATACTGCGCTCGAAGCTTGACCGAGATGGAGAGCAAACAGGTGCACAGCGGGGCGAGCAGCTACAAGATCGAAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM624800             [                           CATCATCGAGAACGGTATACTGCGGGGCAAGCTGACGGAGGTCGAGAGTGAGCCGCACACACCGGAAGCGCAGGAGAAGCTCGACGAGCTGGTGCGCGGCCTGCAGCGCACCGAGAGTGTGGTGCTGCCCTAGAAGGTGAAGGAGCTGGAGGGTGACTCGGAAGCGTCCGAGCGCAACGGTGAGCTGGAGCGTGAGCTGAAGAAGAAAAACATTGAGAGCGATATACTGCGCTCTAAGCTGAAGCAGTTCGAAAACACGCCCTCGAACGCACAGGAAGCCAACGAGCGGATGCGCGATCTGGAGAAGCAGGTCAAGAAGTACCAGATCGAGGCGGACATTCTGCGGGGCGAAGGTGAGCCATCTGGAGAGCGATGCGGCGACGCGCGAGGACCAACAATCGACCGAGCGGATCTAGGAGCTGGATAAGGGGCTGAAGAAAAGCACCACCGAGGGCAATATGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM598743             [                                                                                                                                                                                                                                                                                                                                                        ccgACCAGATCGAGGCGGACATTCTGC GGGCGAAGGTGAGCCAGCTAGAGAGCGATGCGGCGACGCGCGAGGACGAAGAATCGACCGAGCGGATCGAGGAGCTGGAGAAGGGGCTGAAGAAAAGCACCACCGAGGGCAACATGCTGCGGGCGAAGATGCAGATGTTTGAGAAGGAGTCGACGGCCACGCAGGACTCGAACAGCGAGCAGATCGAGGAGCTGCGCAAGGGGCTGAAGAAGAGCACGACCGAGAGCCAAATACTGCGCTCGAAGC TGACCGAGATGGAGAGCAAACAGGTGCACAGCGGGGCGAGCAGCTACAAGATCGAAACGCTCGAGCAGGAGCTCAAGAAGAAAAACATCGAGAACGACATCCTGCGGTCGAAGGTGGAGCAGCTAGAGCGCGTACCGCTGGCGGACAGCCCGGCCAACGAGAAGATCGAGGAGCTGCAGAAGGAGATCCGCAATCTGAAGATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM627419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cCGAAACGCTCGAGCAGGAGCTCAAGAAGAAAAACATCGAGAACGACATCCTGCGGTCGAAGGTGGAGCAGCTAGAGCGCGTACCGCTGGCGGACAGCCCGGCCAACGAGAAGATCGAGGAGCTGCAGAAGGAGATCCGCAATCTGAAGATCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGGACGAACCGACCACCACGCAGGAATCGACCGATCGCATCAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGAGAGCGACATCCTGCGGGCGAAGGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGATAGAGGATCTGGAGAGCGAGCTGAAGAAGAAGACGCTCG AGAACGACATCCTCAAGT CGAAGGTGAGCCAGCTGGAGGGCGAAGTGAT TGCGCACTCCGGTGGCAGCAAGGCGG  ACCCGAACGAGATCAAGA AGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAGGAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCA GATCCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AL694362             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgaggtttAAGATCGAGGAGCTGCAGAAGGAGAT CGCAATCTGAAGATCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGGACGAACCGACCACCACGCAGGAATCGACCGATCGCATCAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGAGAGCGACATCCTGCGGGCGAAGGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGATAGAGGATCTGGAGACCGAGCTGAAGAAGAAGACGCTCGCAGAACGACATCCTCAAGTCCGAAGGTGAGCCAGCTGGAGGGCGAAGTGATNTGCGCACTCCGGTGG AGCAAGGCGGANACCCGAACGAGATCAAGACAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAGGAGCTGNTG TCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCACGATCCGGGCGCTGCGAGAATCCAGGATCGACAAACATCAAGGAGGTGGTGGCGGTCCACCAAGGACNNTGCTGAACATCCGCGAACATGGCAGCACCGCAGCAGCctg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX613279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAGA AGCTGAAGGAAAAGCACGAGGAGGGGATGAACAAGGCGAAGGAGCTGCTGTTCGAGCGCACCAAGACGGGCAAGACGCAGGACATGCA GACCCGGGCGCCGC AGAAT CA GAACGA AAACATCAAGGAGGGGGTGGCGGT CACCAAGGAC AGGCTGAACATCCGC AACATGG AGCA CG AGCAGCTGCAGACGCGGTTCGAGAACATTGACGGCAAGATGAAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX625388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCA GATCCGGGCGCTGC AGAAT CA GATCGA AAACATCAAGGAGGTGGTGGCGGT CACCAAGGAC ATGCTGAACATCCGC AACATGG AGCA CG AGCAGCTGCAGACGCGGTTCGAGAACATTGACTGCAAGATGAAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATGTACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGAAAACGGCGGATCGAGCTGGGATTGATTTTCCATGCTTGAAAAAAACTGCACATACAAAGAAATGATTCAAACCACTGACCAAACTATATCAACGGACGTGTGTGTGTGTGTCACTCTCTCTCTCTCTATTATCACCCGTGCGCCCACTAAATCATTCTTGCACTACTCGCTTACGTTCTTAATATCTTATTATATAGTTTTAGTACAATATCTTACGATAACAACACTCCACACACGCAAAGAAAGTGAGGAAATCCAGAAAAATTACGCCGAAAAGATCGAACTCATCAAGGAGGAAATCGAATCCGTCCGGAATGGTGCCAAAAATTGATACATCCTCCTCCTCCTCCTACCGGCAGGACCAGCAGCTGCCGACCGTAACCGTGGAAGATCACTTGCGGAGCGAGCTGGGAAGGGCGATCGTGCTGCTGCATTGTGCAATAGCAACAGCAACAGCAACAACAAGCTTCCTTCCCCTA]


>consensus_8169#0 CCGGCTCGAGAAGGAGCTGAAGAAGCGCATCATCGAGAACGGTATACTGCGGGGCAAGCT GACGGAGGTCGAGAGTGAGCCGCAGACACCGGAAGCGCAGGAGAAGCTGGACGAGCTGGT GCGCGGCCTGCAGCGCACCGAGAGTGTGGTGCTGCGCGAGAAGGTGAAGGAGCTGGAGGG TGACTCGGAAGCGTCCGAGCGCAACGGTGAGCTGGAGCGCGAGCTGAAGAAGAAGAACAT TGAGAGCGATATACTGCGCTCGAAGCTGAAGCAGTTCGAAAACACGCCCTCGAACGCACA GGAAGCCAACGAGCGGATGCGCGATCTGGAGAAGCAGGTCAAGAAGTACCAGATCGAGGC GGACATTCTGCGGGCGAAGGTGAGCCAGCTGGAGAGCGATGCGGCGACGCGCGAGGACGA AGAATCGACCGAGCGGATCGAGGAGCTGGAGAAGGGGCTGAAGAAAAGCACCACCGAGGG CAACATGCTGCGGGCGAAGATGCAGATGTTTGAGAAGGAGTCGACGGCCACGCAGGACTC GAACAGCGAGCAGATCGAGGAGCTGCGCAAGGGGCTGAAGAAGAGCACGACCGAGAGCCA AATACTGCGCTCGAAGCTGACCGAGATGGAGAGCAAACAGGTGCACAGCGGGGCGAGCAG CTACAAGATCGAAACGCTCGAGCAGGAGCTCAAGAAGAAAAACATCGAGAACGACATCCT GCGGTCGAAGGTGGAGCAGCTAGAGCGCGTACCGCTGGCGGACAGCCCGGCCAACGAGAA GATCGAGGAGCTGCAGAAGGAGATCCGCAATCTGAAGATCCAGAACGACATTCTCAAATC GAAGCTGAACCAGGCGGAGGACGAACCGACCACCACGCAGGAATCGACCGATCGCATCAG CGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGAGAGCGACATCCTGCGGGCGAAGGT GACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGATAGAGGATCT GGAGAGCGAGCTGAAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGAAGGTGAGCCA GCTGGAGGGCGAAGTGATTGCGCACTCCGGTGGCAGCAAGGCGGACCCGAACGAGATCAA GAAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAGGAGCTGCTGTTCGAGCG CACCAAGACGGTCAAGACGCAGGACATGCAGATCCGGGCGCTGCAGAATCAGATCGAAAA CATCAAGGAGGTGGTGGCGGTCACCAAGGACATGCTGAACATCCGCAACATGGAGCACGA GCAGCTGCAGACGCGGTTCGAGAACATTGACGGCAAGATGAAGGCGGAGCGGGAGCGGCA GACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATGTACAATGATCTGCGGGAAGA GTACACGACACAGCTCGAGCTCTTCAAGAAAACGGCGGATCGAGCTGGGATTGATTTTCC ATGCTTGAAAAAAACTGCACATACAAAGAAATGATTCAAACCACTGACCAAACTATATCA ACGGACGTGTGTGTGTGTGTCACTCTCTCTCTCTCTATTATCACCCGTGCGCCCACTAAA TCATTCTTGCACTACTCGCTTACGTTCTTAATATCTTATTATATAGTTTTAGTACAATAT CTTACGATAACAACACTCCACACACGCAAAGAAAGTGAGGAAATCCAGAAAAATTACGCC GAAAAGATCGAACTCATCAAGGAGGAAATCGAATCCGTCCGGAATGGTGCCAAAAATTGA TACATCCTCCTCCTCCTCCTACCGGCAGGACCAGCAGCTGCCGACCGTAACCGTGGAAGA TCACTTGCGGAGCGAGCTGGGAAGGGCGATCGTGCTGCTGCATTGTGCAATAGCAACAGC AACAGCAACAACAAGCTTCCTTCCCCTA



consensusID : consensus_8169#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 711
fasta sequence
                              [AATCCCCGAGGTTTAATCTGAAGATCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGNGACGAACCGACCACCACGCAGGAATCGACCGATCGCATACAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATACGAGAGCGACATACCTGCGGGCGAATGTGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGACTAGAGGATCTGGAGAGCGAGCTGACAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGANNGGTGAGCCAGCTGGAGGGCGAAGTGACTNTGCGCACTCCGCGTGGCAGCAAGGCCGGGACCCGAANCGAGATCAANGCAAGCTGACACGCGGAAACAACGCACGCACGCACCGCTGCACTGCACACCAAAGGGCCGCACACACGGANGCCTGCTGCTACCGGAAGCCGCCAACCAAAGAACGGGGTCCAAAGGAACCGGGCCAAGGTGGGNAACNAATTTTGGGCCACGAATTACCCGGGGGCCCGGCCTNAGGGCCAAGGAACACTCACCCACANGCAAATTCCGAAACACCANAAACCCAAANTCCCACAACGGGGGAAACCGGNNTNNACGNGCATCACGGCGCCCNCGNGCACCCAACCCCACAAACNGGGCANCCAACCTGGGCCAAGCACAACACCAATACCCCGCCACACCCCCTCTG]

[+] EMBL AL693001             [AATCCCCGAGGTTTAATCTGAAGATCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGNGACGAACCGACCACCACGCAGGAATCGACCGATCGCATACAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATACGAGAGCGACATACCTGCGGGCGAATGTGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGACTAGAGGATCTGGAGAGCGAGCTGACAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGANNGGTGAGCCAGCTGGAGGGCGAAGTGACTNTGCGCACTCCGCGTGGCAGCAAGGCCGGGACCCGAANCGAGATCAANGCAAGCTGACACGCGGAAACAACGCACGCACGCACCGCTGCACTGCACACCAAAGGGCCGCACACACGGANGCCTGCTGCTACCGGAAGCCGCCAACCAAAGAACGGGGTCCAAAGGAACCGGGCCAAGGTGGGNAACNAATTTTGGGCCACGAATTACCCGGGGGCCCGGCCTNAGGGCCAAGGAACACTCACCCACANGCAAATTCCGAAACACCANAAACCCAAANTCCCACAACGGGGGAAACCGGNNTNNACGNGCATCACGGCGCCCNCGNGCACCCAACCCCACAAACNGGGCANCCAACCTGGGCCAAGCACAACACCAATACCCCGCCACACCCCCTCTG]


>consensus_8169#1 AATCCCCGAGGTTTAATCTGAAGATCCAGAACGACATTCTCAAATCGAAGCTGAACCAGG CGGAGNGACGAACCGACCACCACGCAGGAATCGACCGATCGCATACAGCGAGCTGGAGAA CGAGCTGAAGAAGCGCGTGATACGAGAGCGACATACCTGCGGGCGAATGTGTGACCCAGC TGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGACTAGAGGATCTGGAGAGC GAGCTGACAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGANNGGTGAGCCAGCTGG AGGGCGAAGTGACTNTGCGCACTCCGCGTGGCAGCAAGGCCGGGACCCGAANCGAGATCA ANGCAAGCTGACACGCGGAAACAACGCACGCACGCACCGCTGCACTGCACACCAAAGGGC CGCACACACGGANGCCTGCTGCTACCGGAAGCCGCCAACCAAAGAACGGGGTCCAAAGGA ACCGGGCCAAGGTGGGNAACNAATTTTGGGCCACGAATTACCCGGGGGCCCGGCCTNAGG GCCAAGGAACACTCACCCACANGCAAATTCCGAAACACCANAAACCCAAANTCCCACAAC GGGGGAAACCGGNNTNNACGNGCATCACGGCGCCCNCGNGCACCCAACCCCACAAACNGG GCANCCAACCTGGGCCAAGCACAACACCAATACCCCGCCACACCCCCTCTG



consensusID : consensus_8169#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence
                              [CCGCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGGACGAACCGACCACTACGCAGGAATCGACCGATCGCATCAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGAGAGCGACATCCTGCGGGCGAAGGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGATAGAGGATCTGGAGAGCGAGCTGAAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGAAGGTGAGCCAGCTGGAGGGCGAAGTGATTGCGCACTCCGGTGGCAGCAAGGCGGACCCGAACGAGATCAAGAAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAGGAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCAGATCCGGGCGCTGCAGAATCAGATCGAAAACATCAAGGAGGTGGTGGCGGTCACCAAGGACATGCTGAACATCCGCAACATGGAGCACGAGCAGCTGCAGACGCGGTTCGAGAACATTGACTGCAAGATGAAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATGTACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGGAAATCCAGAAAAAT]

[+] EMBL BM622136             [CCGCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGGACGAACCGACCACTACGCAGGAATCGACCGATCGCATCAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGAGAGCGACATCCTGCGGGCGAAGGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGATAGAGGATCTGGAGAGCGAGCTGAAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGAAGGTGAGCCAGCTGGAGGGCGAAGTGATTGCGCACTCCGGTGGCAGCAAGGCGGACCCGAACGAGATCAAGAAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAGGAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCAGATCCGGGCGCTGCAGAATCAGATCGAAAACATCAAGGAGGTGGTGGCGGTCACCAAGGACATGCTGAACATCCGCAACATGGAGCACGAGCAGCTGCAGACGCGGTTCGAGAACATTGACTGCAAGATGAAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATGTACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGGAAATCCAGAAAAAT]


>consensus_8169#2 CCGCCAGAACGACATTCTCAAATCGAAGCTGAACCAGGCGGAGGACGAACCGACCACTAC GCAGGAATCGACCGATCGCATCAGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATCGA GAGCGACATCCTGCGGGCGAAGGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAA CTCGAACGAGCGGATAGAGGATCTGGAGAGCGAGCTGAAGAAGAAGACGCTCGAGAACGA CATCCTCAAGTCGAAGGTGAGCCAGCTGGAGGGCGAAGTGATTGCGCACTCCGGTGGCAG CAAGGCGGACCCGAACGAGATCAAGAAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAA GGCGAAGGAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGACATGCAGATCCG GGCGCTGCAGAATCAGATCGAAAACATCAAGGAGGTGGTGGCGGTCACCAAGGACATGCT GAACATCCGCAACATGGAGCACGAGCAGCTGCAGACGCGGTTCGAGAACATTGACTGCAA GATGAAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAA GATGTACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGGAAATCCA GAAAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8169#0      CCGGCTCGAGAAGGAGCTGAAGAAGCGCATCATCGAGAACGGTATACTGCGGGGCAAGCT 60
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GACGGAGGTCGAGAGTGAGCCGCAGACACCGGAAGCGCAGGAGAAGCTGGACGAGCTGGT 120
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GCGCGGCCTGCAGCGCACCGAGAGTGTGGTGCTGCGCGAGAAGGTGAAGGAGCTGGAGGG 180
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      TGACTCGGAAGCGTCCGAGCGCAACGGTGAGCTGGAGCGCGAGCTGAAGAAGAAGAACAT 240
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      TGAGAGCGATATACTGCGCTCGAAGCTGAAGCAGTTCGAAAACACGCCCTCGAACGCACA 300
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GGAAGCCAACGAGCGGATGCGCGATCTGGAGAAGCAGGTCAAGAAGTACCAGATCGAGGC 360
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GGACATTCTGCGGGCGAAGGTGAGCCAGCTGGAGAGCGATGCGGCGACGCGCGAGGACGA 420
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      AGAATCGACCGAGCGGATCGAGGAGCTGGAGAAGGGGCTGAAGAAAAGCACCACCGAGGG 480
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      CAACATGCTGCGGGCGAAGATGCAGATGTTTGAGAAGGAGTCGACGGCCACGCAGGACTC 540
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GAACAGCGAGCAGATCGAGGAGCTGCGCAAGGGGCTGAAGAAGAGCACGACCGAGAGCCA 600
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      AATACTGCGCTCGAAGCTGACCGAGATGGAGAGCAAACAGGTGCACAGCGGGGCGAGCAG 660
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      CTACAAGATCGAAACGCTCGAGCAGGAGCTCAAGAAGAAAAACATCGAGAACGACATCCT 720
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GCGGTCGAAGGTGGAGCAGCTAGAGCGCGTACCGCTGGCGGACAGCCCGGCCAACGAGAA 780
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GATCGAGGAGCTGCAGAAGGAGATCCGCAATCTGAAGATCCAGAACGACATTCTCAAATC 840
consensus_8169#2      ------------------------------------CCGCCAGAACGACATTCTCAAATC 24
consensus_8169#1      --------------AATCCCCGAGGTTTAATCTGAAGATCCAGAACGACATTCTCAAATC 46
                                                             *********************

consensus_8169#0      GAAGCTGAACCAGGCGGAGG-ACGAACCGACCACCACGCAGGAATCGACCGATCGCAT-C 898
consensus_8169#2      GAAGCTGAACCAGGCGGAGG-ACGAACCGACCACTACGCAGGAATCGACCGATCGCAT-C 82
consensus_8169#1      GAAGCTGAACCAGGCGGAGNGACGAACCGACCACCACGCAGGAATCGACCGATCGCATAC 106
                      *******************  ************* *********************** *

consensus_8169#0      AGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGAT-CGAGAGCGACAT-CCTGCGGGCGA 956
consensus_8169#2      AGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGAT-CGAGAGCGACAT-CCTGCGGGCGA 140
consensus_8169#1      AGCGAGCTGGAGAACGAGCTGAAGAAGCGCGTGATACGAGAGCGACATACCTGCGGGCGA 166
                      *********************************** ************ ***********

consensus_8169#0      AGGTG--ACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGA-TAG 1013
consensus_8169#2      AGGTG--ACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGA-TAG 197
consensus_8169#1      ATGTGTGACCCAGCTGGAGTGTGAGCTGTCGCCGACCAAGAACTCGAACGAGCGGACTAG 226
                      * ***  ************************************************* ***

consensus_8169#0      AGGATCTGGAGAGCGAGCTGA-AGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGAAG 1072
consensus_8169#2      AGGATCTGGAGAGCGAGCTGA-AGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGAAG 256
consensus_8169#1      AGGATCTGGAGAGCGAGCTGACAGAAGAAGACGCTCGAGAACGACATCCTCAAGTCGANN 286
                      ********************* ************************************  

consensus_8169#0      G-TGAGCCAGCTGGAGGGCGAAGTGA--TTGCGCACTCCG-GTGGCAGCAAGGC--GGAC 1126
consensus_8169#2      G-TGAGCCAGCTGGAGGGCGAAGTGA--TTGCGCACTCCG-GTGGCAGCAAGGC--GGAC 310
consensus_8169#1      GGTGAGCCAGCTGGAGGGCGAAGTGACTNTGCGCACTCCGCGTGGCAGCAAGGCCGGGAC 346
                      * ************************   *********** *************  ****

consensus_8169#0      CCGAAC-GAGATCAAG--AAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAG 1183
consensus_8169#2      CCGAAC-GAGATCAAG--AAGCTGAAGGAAAAGCACGAGGAGGTGATGAACAAGGCGAAG 367
consensus_8169#1      CCGAANCGAGATCAANGCAAGCTGA--------CACGCGGAAACAACGCA-----CGCAC 393
                      *****  ********   *******        **** ***    * * *     ** * 

consensus_8169#0      GAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGA-CATGCAGAT-CCGGGCGC 1241
consensus_8169#2      GAGCTGCTGTTCGAGCGCACCAAGACGGTCAAGACGCAGGA-CATGCAGAT-CCGGGCGC 425
consensus_8169#1      GCACCGCTGCACT-GCACACCAAAGGGCCGCACACACGGANGCCTGCTGCTACCGGAAGC 452
                      *  * ****  *  ** ******   *    * ** * *   * *** * * ****  **

consensus_8169#0      TGCAGAATCAGATCGAAAACATCAAGGAGGTGGTGGCGGTCACCAAGGACATGCTGAACA 1301
consensus_8169#2      TGCAGAATCAGATCGAAAACATCAAGGAGGTGGTGGCGGTCACCAAGGACATGCTGAACA 485
consensus_8169#1      CGCC-AACCAAAGAACGGGGTCCAAAGGAACCG----GGCCAAGGTGGGNA-ACNAATTT 506
                       **  ** ** *          *** *     *    ** **    **  *  *  *   

consensus_8169#0      TCCGCAACATGGAGCACGAGCAGCTGCAGACGCGGTTCGAGAACATTGACG-GCAAGATG 1360
consensus_8169#2      TCCGCAACATGGAGCACGAGCAGCTGCAGACGCGGTTCGAGAACATTGACT-GCAAGATG 544
consensus_8169#1      TGGGCCACGAATTACCCGGGGGCCCGGCCTNAGGGCCAAGGAACACTCACCCACANGCAA 566
                      *  ** **      * ** *   * *       **     ***** * **   ** *   

consensus_8169#0      AAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATG 1420
consensus_8169#2      AAGGCGGAGCGGGAGCGGCAGACGCTGCTCGAGAAGAAGCTGAGCGTCTCGCAAAAGATG 604
consensus_8169#1      ATTCCGAAACACCANAAACCCAAANT-CCCACAACGGGGGAAACCGGNNTNNACGNGCAT 625
                      *   ** * *   *    *  *   * * *   * *  *   * **      *   *   

consensus_8169#0      TACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGAAAACGGCGGAT 1480
consensus_8169#2      TACAATGATCTGCGGGAAGAGTACACGACACAGCTCGAGCTCTTCAAGGAAATC-CAGAA 663
consensus_8169#1      CACGGCG-CCCNCGNGCACCCAACCCCACAAACNGGGCANCCAACCTGGGCCAAGCACAA 684
                       **   *  *  ** * *    ** * *** *    *    *  *  *       *  * 

consensus_8169#0      CGAGCTGGGATTGATTTTCCATGCTTGAAAAAAACTGCACATACAAAGAAATGATTCAAA 1540
consensus_8169#2      AAAT-------------------------------------------------------- 667
consensus_8169#1      CACCAATACCCCGCCACACCCCCTCTG--------------------------------- 711
                                                                                  

consensus_8169#0      CCACTGACCAAACTATATCAACGGACGTGTGTGTGTGTGTCACTCTCTCTCTCTCTATTA 1600
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      TCACCCGTGCGCCCACTAAATCATTCTTGCACTACTCGCTTACGTTCTTAATATCTTATT 1660
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      ATATAGTTTTAGTACAATATCTTACGATAACAACACTCCACACACGCAAAGAAAGTGAGG 1720
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      AAATCCAGAAAAATTACGCCGAAAAGATCGAACTCATCAAGGAGGAAATCGAATCCGTCC 1780
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      GGAATGGTGCCAAAAATTGATACATCCTCCTCCTCCTCCTACCGGCAGGACCAGCAGCTG 1840
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      CCGACCGTAACCGTGGAAGATCACTTGCGGAGCGAGCTGGGAAGGGCGATCGTGCTGCTG 1900
consensus_8169#2      ------------------------------------------------------------
consensus_8169#1      ------------------------------------------------------------
                                                                                  

consensus_8169#0      CATTGTGCAATAGCAACAGCAACAGCAACAACAAGCTTCCTTCCCCTA 1948
consensus_8169#2      ------------------------------------------------
consensus_8169#1      ------------------------------------------------
                                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)