Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8178 cluster # 8178       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8178#0 length = 1287 sequences # 4  
consensus_8178#1 length = 881 sequences # 1  
consensus_8178#2 length = 691 sequences # 3  
consensus_8178#3 length = 610 sequences # 1  

consensusID : consensus_8178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1287
fasta sequence
                              [GCCCGAGGTTAGACGCTGCAGGATTGCTCGCCATCCGCTACAATCACAACTCGCTGCACATGGAATCGCTTACGATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTGTGAGTAACTGAGGAACCGCGAGCAGGAATTAATTAAATTGCTTCTAACAATACTTTTCTATGTTTTAGCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCGCGCAGCATCGGATCCCGTATCGGAAGCTTATACCACGCCAGCTGGAAGCCTTTGTACAGCTGCACTGTACACTGAAAAGCTAGAAGCTAGAGATGTTTCAATTACAATGCAACTTTGGTTAGTCTGCTGATCGGCCCCCCAGAGGCGCATGACAAGCCAGCCAGCGGAGCGTGATATAATCAAAATGTAATCCTCCCCAGCCCCCGTTCTACGCAATGGTTTTGGTGCTCCGTCTAACGTACATCTGTTCGAATGGATATGTATTAAATTTTC]

[+] EMBL AL931696             [GCCCGAGGTTAGACGCTGCAGGATTGCTCGCCATCCGCTACAATCACAACTCGCTGCACATGGAATCGCTTACGATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM613087             [                         ccgCGCCATCCGCTACAATCACAACTCGCTGCACATGGAATCGCTTACGATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX624164             [                                                                                                                                                                                                                                                                                             TACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTGTGAGTAACTGAGGAACCGCGAGCAGGAATTAATTAAATTGCTTCTAACAATACTTTTCTATGTTTTAGCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGCC                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM648023             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGGTTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAGAGCTACGAAACACGTGCCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCGCGCAGCATCGGATCCCGTATCGGAAGCTTATACCACGCCAGCTGGAAGCCTTTGTACAGCTGCACTGTACACTGAAAAGCTAGAAGCTAGAGATGTTTCAATTACAATGCAACTTTGGTTAGTCTGCTGATCGGCCCCCCAGAGGCGCATGACAAGCCAGCCAGCGGAGCGTGATATAATCAAAATGTAATCCTCCCCAGCCCCCGTTCTACGCAATGGTTTTGGTGCTCCGTCTAACGTACATCTGTTCGAATGGATATGTATTAAATTTTC]


>consensus_8178#0 GCCCGAGGTTAGACGCTGCAGGATTGCTCGCCATCCGCTACAATCACAACTCGCTGCACA TGGAATCGCTTACGATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCA TCGTCTTCCGCGGCGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCT GGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCC GCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTG TGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCA ACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGA CGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGA CGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGC GCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATG ACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGA AATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAA CTTCAACTGTGAGTAACTGAGGAACCGCGAGCAGGAATTAATTAAATTGCTTCTAACAAT ACTTTTCTATGTTTTAGCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAA CGGTAGTGAAAGAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTA ACGCGGACGGTTTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCA AAAGCTACGAAACACGTGCCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCGCGCAGC ATCGGATCCCGTATCGGAAGCTTATACCACGCCAGCTGGAAGCCTTTGTACAGCTGCACT GTACACTGAAAAGCTAGAAGCTAGAGATGTTTCAATTACAATGCAACTTTGGTTAGTCTG CTGATCGGCCCCCCAGAGGCGCATGACAAGCCAGCCAGCGGAGCGTGATATAATCAAAAT GTAATCCTCCCCAGCCCCCGTTCTACGCAATGGTTTTGGTGCTCCGTCTAACGTACATCT GTTCGAATGGATATGTATTAAATTTTC



consensusID : consensus_8178#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 881
fasta sequence
                              [CCCCGAGGTTAATTGCTACATCTACGGTGAACGGTGTTACGCCGGTGTGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGTGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAANGCAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTCTCTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGCTCGCGGCACGAGTGATCGCGGCAGCATCGGATCCGTACCGGAAGCTAATACCAGCCAGCTGGCAAGCCTATTGTACAGCTTGCACTGTACACCGAAAAGCTAGAAGCTAGAAACTGTTTCAATTACAATGCAACTTTGGTTTANTCTGCTGATCGGCCCCCAGANGGCGCATGACAAGCCAGCCAGCGNGACGCGTGACTATAATCAAAAGTGTAATCCAGCCCAGCCCCGTTCTACGCAATGGCTANNATGGGTGATCCGTNCTAACGTACATCTGTACGAACTGGCATATGTATTAACCTNACACAGCAAGCATTTAATTACACCAACTAATGCCCCAAGTACANTGGNTACAACACCNNCAACANANAAAACCACAACACNACAAACACCNACGNCGCCACTTGGCAGGACGAGGGCCCGTGCCAAACGGCCTCTANNTTTCCCCTTATCAATATGAAAGCGGGGCTANAGAGTCTATATAAACGCCCTATAGCGC]

[+] EMBL AL692843             [CCCCGAGGTTAATTGCTACATCTACGGTGAACGGTGTTACGCCGGTGTGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGTGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAANGCAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTCTCTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGCTCGCGGCACGAGTGATCGCGGCAGCATCGGATCCGTACCGGAAGCTAATACCAGCCAGCTGGCAAGCCTATTGTACAGCTTGCACTGTACACCGAAAAGCTAGAAGCTAGAAACTGTTTCAATTACAATGCAACTTTGGTTTANTCTGCTGATCGGCCCCCAGANGGCGCATGACAAGCCAGCCAGCGNGACGCGTGACTATAATCAAAAGTGTAATCCAGCCCAGCCCCGTTCTACGCAATGGCTANNATGGGTGATCCGTNCTAACGTACATCTGTACGAACTGGCATATGTATTAACCTNACACAGCAAGCATTTAATTACACCAACTAATGCCCCAAGTACANTGGNTACAACACCNNCAACANANAAAACCACAACACNACAAACACCNACGNCGCCACTTGGCAGGACGAGGGCCCGTGCCAAACGGCCTCTANNTTTCCCCTTATCAATATGAAAGCGGGGCTANAGAGTCTATATAAACGCCCTATAGCGC]


>consensus_8178#1 CCCCGAGGTTAATTGCTACATCTACGGTGAACGGTGTTACGCCGGTGTGATGACTTTCAC ACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGTGCTGCTGCTGAAATGTGG TGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAAC TCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAANGCAAA TCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTCTCT GAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAAC ACGTGCCATCAATCTGCGCTGCTCGCGGCACGAGTGATCGCGGCAGCATCGGATCCGTAC CGGAAGCTAATACCAGCCAGCTGGCAAGCCTATTGTACAGCTTGCACTGTACACCGAAAA GCTAGAAGCTAGAAACTGTTTCAATTACAATGCAACTTTGGTTTANTCTGCTGATCGGCC CCCAGANGGCGCATGACAAGCCAGCCAGCGNGACGCGTGACTATAATCAAAAGTGTAATC CAGCCCAGCCCCGTTCTACGCAATGGCTANNATGGGTGATCCGTNCTAACGTACATCTGT ACGAACTGGCATATGTATTAACCTNACACAGCAAGCATTTAATTACACCAACTAATGCCC CAAGTACANTGGNTACAACACCNNCAACANANAAAACCACAACACNACAAACACCNACGN CGCCACTTGGCAGGACGAGGGCCCGTGCCAAACGGCCTCTANNTTTCCCCTTATCAATAT GAAAGCGGGGCTANAGAGTCTATATAAACGCCCTATAGCGC



consensusID : consensus_8178#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 691
fasta sequence
                              [GATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGGTACGAATGGTTGCTGGAGTTGGTGAGAGAGCAAGCGGTGCTTAGTGTTATCCTTTCTTTGAAATAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGACGG]

[-] EMBL BM602179             [GATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGGTACGAATGGTTGCTGGAGTTGGTGAGAGAGCAAGCGGTGCTTAGTGTTATCCTTTCTTTGAAATAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGACGG]
[+] EMBL BX622822             [                    GTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGGCGCAATCNGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX621595             [                                                                                                                                                                                                                                                                                                                                        TATGAGATGAATATCGTGACGGTGNTGTACCTGATTACGAT                                                                                                                                                                                                                                                                                                                                  ]


>consensus_8178#2 GATCCGTGAGCGCATTCTCGGTCAAAATCCGGAGGTAGCACATGCCATCGTCTTCCGCGG CGCAATCTGTGCCGACAATGGGCGGTTCGATCGGTGTGAAAGCCTCTGGCTGCATGCACT TCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGATCTGCTCCGCTTCGTGCAACT GTTCTCGCAAGAGTATTCGATCAACGAAACGATACGATTCGACAGTGTGATCGCGGTGCT TGGTGCGTGTGTCGATGAGCTGCGGTACAATCAGCAAAAGATGGCCAACCCTGGTCCGCG GGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCT GATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGAC GCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGA TCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGA TGACGTTTGCAGGTACGAATGGTTGCTGGAGTTGGTGAGAGAGCAAGCGGTGCTTAGTGT TATCCTTTCTTTGAAATAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTG GTGCTTCTGTCGATGTGGTCGACAACGACGG



consensusID : consensus_8178#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 610
fasta sequence
                              [CGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCCCGCAGCATCGGATCCCGTACCGGAAGCTAATACA]

[+] EMBL BX616424             [CGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGTACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTTGAAAGCATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCCCGCAGCATCGGATCCCGTACCGGAAGCTAATACA]


>consensus_8178#3 CGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGT ACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGC AGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGG ATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTGGATGACTTTCACA CTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGGCTGCTGCTGAAATGTGGTG CTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAACTC TACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCA CGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTTGAAAG CATCGCAAGTGTGTGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTG CCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCCCGCAGCATCGGATCCCGTACCGGA AGCTAATACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      CGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGATGAATATCGTGACGGTGCTGT 60
consensus_8178#0      ------------------------------------------------------------
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      ACCTGATTACGATCATTACGAAGCTGCTGCGCAAGGAGCAGTTCGTGCGGACGGAGGAGC 120
consensus_8178#0      ------------------------------------------------------------
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ----------------------------------------------------CCCCGAGG 8
consensus_8178#3      AGACGCTGCAGATGTACCAGATGGTGTACCAGCTGAACTTGATGATGGTGCGCTTGAGGG 180
consensus_8178#0      GCCCGAGGTTAGACGCTGCAGGATTGCTCGCCATCCGCTACAATCACAACTCGCTGCACA 60
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      TTAAT-------TGCTACATCTA-CGGTGAACGGTGTTACGCCGGTGTGATGACTTTCAC 60
consensus_8178#3      ATGATCAGACGTTGCTACATCTAGCGGTGAACGGTGTTACGCCGGTG-GATGACTTTCAC 239
consensus_8178#0      TGGAATCGCTTACGATCCGTGAGCGCATTCTCGGTCAAAATCCGGAG--GTAGCA--CAT 116
consensus_8178#2      -------------GATCCGTGAGCGCATTCTCGGTCAAAATCCGGAG--GTAGCA--CAT 43
                                   * * * *       *   ****   *  **** *   *  *   ** 

consensus_8178#1      ACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAGTGCTGCTGCTGAAATGTGG 120
consensus_8178#3      ACTGATGACGTTTGCAGATTCCCCTGTGCGGACACTGTTAG-GCTGCTGCTGAAATGTGG 298
consensus_8178#0      GCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATG--GGCGGTTCGATCGGTGTG-AA 173
consensus_8178#2      GCCATCGTCTTCCGCGGCGCAATCTGTGCCGACAATG--GGCGGTTCGATCGGTGTG-AA 100
                       *    * * *  ** *      ****** **** **   * * * *    *   **   

consensus_8178#1      TGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAAC 180
consensus_8178#3      TGCTTCTGTCGATGTGGTCGACAACGATCGAAATACGCCTTTACACACGCTAACTTCAAC 358
consensus_8178#0      AGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGA- 232
consensus_8178#2      AGCCTCTGGCTGCATGCACTTCGTCTGCGCCAGCAGAACGGGCTGCAGGTGCAGCGCGA- 159
                       ** **** *    **  *  *  *      *  *   *      ** *   *   * * 

consensus_8178#1      TCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAANGCAAA 240
consensus_8178#3      TCTACAATCGGCTGTGCTGCGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAG-AAA 417
consensus_8178#0      TCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGA-TACGAT 291
consensus_8178#2      TCTGCTCCGCTTCGTGCAACTGTTCTCGCAAGAGTATTCGATCAACGAAACGA-TACGAT 218
                      *** *        ****  *   *  ** * * * **   *  *  * *  **     * 

consensus_8178#1      TCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTCTCT 300
consensus_8178#3      TCACGGAAATGTTAATAGAAGCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTT-- 475
consensus_8178#0      TCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCT--GCG-GTACAATCAGC 348
consensus_8178#2      TCGACAGTGTGATCGCGGTGCTTGGTGCGTGTGTCGATGAGCT--GCG-GTACAATCAGC 275
                      **       ** *    *    ***      * ****** * *   ** * **  *    

consensus_8178#1      GAAAGCATCGCAAGTGTG-TGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAA 359
consensus_8178#3      GAAAGCATCGCAAGTGTG-TGTGCAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAA 534
consensus_8178#0      AAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGA 408
consensus_8178#2      AAAAGATGGCCAACCCTGGTCCGCGGGAAGATCTGGAAGCGGTGGCAGATAATTATGAGA 335
                       ****     ***   ** *  **       * * *  *** *     * *  ** ** *

consensus_8178#1      CACGTGCCATCAATCTGCGCTGC-TCGCGGCACGAGTGATCGCGGCAGCATCGGATCC-G 417
consensus_8178#3      CACGTGCCATCAATCTGCGCTGCCTCGCGGCACGAGTGATCCCG-CAGCATCGGATCCCG 593
consensus_8178#0      TGAATATCGTGA--CGGTGCTGTACCTGATTACGA-TCATTACG----AAGCTGCTGCGC 461
consensus_8178#2      TGAATATCGTGA--CGGTGCTGTACCTGATTACGA-TCATTACG----AAGCTGCTGCGC 388
                          *  * * *  * * ****   *     **** * **  **     * * * * *  

consensus_8178#1      TACCGGAAGCTAATACCAGCCAGCTGGCAAGCCTATTGTACAGCTTGCACTGTACACCGA 477
consensus_8178#3      TACCGGAAGCTAATACA------------------------------------------- 610
consensus_8178#0      AAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAG 521
consensus_8178#2      AAGGAGCAGTTCGTGCGGACGGAGGAGCAGACGCTGCAGATGTACCAGATGGTGTACCAG 448
                       *   * ** *  * *                                            

consensus_8178#1      A-AAGCTAGAAGCTAGAAACTGTTTCAATTACAATGCAACTTTGGTTTANTCTGC--TGA 534
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      CTGAACTTGATGATGGTG--CGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGA 579
consensus_8178#2      CTGAACTTGATGATGGTG--CGCTTGAGGGATGATCAGACGTTGCTACATCTAGCGGTGA 506
                                                                                  

consensus_8178#1      TCGGCCCCCAGANGGCGCATGACAAGCCAGCCAGCGNGACGCGTGACTATAATCAAAAGT 594
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      ACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGATTCCCCTGTGCGG 639
consensus_8178#2      ACGGTGTTACGCCGGTGGATGACTTTCACACTGATGACGTTTGCAGGTAC----GAATGG 562
                                                                                  

consensus_8178#1      GTAATCC-AGCCCAGCCCCGTTCTACGCAATGGCTANNATGGGTGATCCGTNCTAACGTA 653
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      ACACTGTTAGGCTGCTGCTGAAATGTGGTGCTTCTGTCGATG-TGGTCGACAACGATCGA 698
consensus_8178#2      TTGCTG--GAGTTGGTGAGAGAGCAAGCGGTGCTTAGTGTTA-TCCTTT-CTTTGAAATA 618
                                                                                  

consensus_8178#1      CATCTGTACGAACTGGCATATGTATTAACCTNACA----CAGCAAGCATTTAATTACACC 709
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      AATACGCCTTTACACACGC-TAACTTCAACTGTGAGTAACTGAGGAACCGCGA--GCAGG 755
consensus_8178#2      GATTCCCCTGTGCGGACAC-TG--TTAGGCTG-------CTGCTGAAATGTGGT-GCTTC 667
                                                                                  

consensus_8178#1      AACTAATGCC-CCAAGTACANTGGNTACAACACCNNCAACANANAAAACCACAACACNAC 768
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      AATTAATTAAATTGCTTCTAACAATACTTTTCTATGTTTTAGCTACAATCGGCTGTGCTG 815
consensus_8178#2      TGTCGATGTGGTCGACAACGACGG------------------------------------ 691
                                                                                  

consensus_8178#1      AAACACCNACGNCGCCACTTGGCAGGACGAGGGCCCGTGCCAAACGGCCTCTANNTTTCC 828
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      CGTATGCCGGACGCGAATGTAAAAACGGTAGTGAAAGAAATCACGGAAATGTTAATAGAA 875
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      CCTTATCAATATGAAAGCGGGGCTANAGAGTCTATATAAACGCCCTATAGCGC------- 881
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      GCTGGCATTCATCTCGATGCGGTTAACGCGGACGGTTTGAAAGCATCGCAAGTGTGTGTG 935
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      CAAAGCTGTGTTGCCGCGTTCATCAAAAGCTACGAAACACGTGCCATCAATCTGCGCTGC 995
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      CTCGCGGCACGAGTGATCGCGCAGCATCGGATCCCGTATCGGAAGCTTATACCACGCCAG 1055
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      CTGGAAGCCTTTGTACAGCTGCACTGTACACTGAAAAGCTAGAAGCTAGAGATGTTTCAA 1115
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      TTACAATGCAACTTTGGTTAGTCTGCTGATCGGCCCCCCAGAGGCGCATGACAAGCCAGC 1175
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ------------------------------------------------------------
consensus_8178#3      ------------------------------------------------------------
consensus_8178#0      CAGCGGAGCGTGATATAATCAAAATGTAATCCTCCCCAGCCCCCGTTCTACGCAATGGTT 1235
consensus_8178#2      ------------------------------------------------------------
                                                                                  

consensus_8178#1      ----------------------------------------------------
consensus_8178#3      ----------------------------------------------------
consensus_8178#0      TTGGTGCTCCGTCTAACGTACATCTGTTCGAATGGATATGTATTAAATTTTC 1287
consensus_8178#2      ----------------------------------------------------
                                                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)