cluster # 8223

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Anopheles gambiae
cluster # 8223 cluster # 8223 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8223#0 length = 1220 sequences # 3
consensus_8223#1 length = 695 sequences # 1

consensus_8223#2 length = 640 sequences # 2
consensus_8223#3 length = 604 sequences # 2
consensus_8223#4 length = 586 sequences # 1

consensusID : consensus_8223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1220
fasta sequence

                              [ACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAACAAGGCAGCAAAGGTTTACTGCAAGCAGGCAAATAGCATTAGCGAGATCGAGGGACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGCAGCCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGATTCACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCACATTTAATTAAACGCACAGCGATCGAAGGCAAACGGGTGGCGTGTAAAACCTCCCCAGTGCCAGTAAAGCCCCAAGACCGGGCTGCAGAGGAACGGGACGACCCCAGGGAGAAACCACCGTACCAAACCAGGGACAGGTAGCGCTGCCGACCCCGTCGAAGTAGTAGACCGCATTGGCCCCTGCTTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCAACAAAAGAAACCAAAAATCCCACCACCACCAACCCGCCGCCCTATCAACCGAGCCGTAAGAAAGCGCGTAATCAAACCTTTCGAGCACGCACACACGCGCTAAGCAATAGCAACAAGCAACAAGTTCGATAACAGCAAGAGCCGCAGCCGAACCCAGCCTGCTTAGAGGGAAGAAACAAAACATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGCTACCTGCACATACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAGGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGAT]

[+] EMBL CNS08VSJ             [ACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAACAAGGCAGCAAAGGTTTACTGCAAGCAGGCAAATAGCATTAGCGAGATCGAGGGACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGCAGCCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGATTCACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCACATTTAATTAAACGCACAGCGATCGAAGGCAAACGGGTGGCGTGTAAAACCTCCCCAGTGCCAGTAAAGCCCCAAGACCGGGCTGCAGAGGAACGGGACGACCCCAGGGAGAAACCACCGTACCAAACCAGGGACAGGTAGCGCTGCCGACCCCGTCGAAGTAGTAGACCGCATTGGCCCCTGCTTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCAACAAAAGAAACCAAAAATCCCACCACCACCAACCCGCCGCCCTATCAACCGAGCCGTAAGAAAGCGCGTAATCAAACCTTTCGAGCACGCACACACGCGCTAAGCAATAGCAACAAGCAACAAGTTCGATAACAGCAAGAGCCGCAGCCGAACCCAGCCTGCTTAGAGGGAAGAAACAAAACATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGCTACCTGCACATACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAAAAAAAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGT                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS08VSK             [                                                                                                                                                                                                                                                                                                                                                                                                   CAGGGACAGGTAGCGCTGCCGACCCCGTCGAAGTAGTAGACCGCATTGGCCCCTGCTTCGAAGTCAACCCCCCCCGATTGAAGTGCAAAACCAACAAAAGAAACCAAAAATCCCACCATTTCCAACCCGCCGCCCTCTCAACCGAGCCGTAAGAAAGCGCGTAATCAAACCTTTCGAGCACGAACAAACGCGCTAAGCAATAGCAACAAGCAACAAGTTCGATAACAGCAAGAGCCGCAGCCGAACCCAGCCTGCTTAGAGGGAAGAAACAAAACATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGCTACCTGAACAAACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAGGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTG        ]
[+] EMBL AGA282908            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTGGTGCTACCTGCACATACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGAT]




>consensus_8223#0
ACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAACAAGGCAGCAAAGGTTTACTGC
AAGCAGGCAAATAGCATTAGCGAGATCGAGGGACGCCCGCCAACAGCAGAAGGGAGCAAC
CAACACGGTGTACATTAGCCAGCAAAAGCAGCCGAGCCGAGCCGAGCCGCCACCCCAAAA
CCCACGTCAAAGCAAGTGTGTGTCCGTGATTCACGTGAAGCGACGGAAGCTTTGCCACCC
TCAAACACAAACGGGCGCACATTTAATTAAACGCACAGCGATCGAAGGCAAACGGGTGGC
GTGTAAAACCTCCCCAGTGCCAGTAAAGCCCCAAGACCGGGCTGCAGAGGAACGGGACGA
CCCCAGGGAGAAACCACCGTACCAAACCAGGGACAGGTAGCGCTGCCGACCCCGTCGAAG
TAGTAGACCGCATTGGCCCCTGCTTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCA
ACAAAAGAAACCAAAAATCCCACCACCACCAACCCGCCGCCCTATCAACCGAGCCGTAAG
AAAGCGCGTAATCAAACCTTTCGAGCACGCACACACGCGCTAAGCAATAGCAACAAGCAA
CAAGTTCGATAACAGCAAGAGCCGCAGCCGAACCCAGCCTGCTTAGAGGGAAGAAACAAA
ACATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGCTACCTGCACATACCCG
CTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGA
ACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAG
TGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGC
AGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAG
AATCGTTTAAAAGGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGA
TGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACT
TTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGC
ACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAG
AGATTGTGTGTGTGTGTGAT

consensusID : consensus_8223#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence

                              [CCGAAGAAAACCCATAACAAGCGAGAGTTTGTGTTGTGCTCAACCGATTCAACCCTAGCGTGTGGACGCTGCGACAAAGCCACAAAACATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGGTGCTACCTGTACATACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGTGTGAAATAAAATAAATCGTTCCATATCGACGCTGTGCAGTAGGCTAC]

[+] EMBL BM643443             [CCGAAGAAAACCCATAACAAGCGAGAGTTTGTGTTGTGCTCAACCGATTCAACCCTAGCGTGTGGACGCTGCGACAAAGCCACAAAACATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGGTGCTACCTGTACATACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGTGTGAAATAAAATAAATCGTTCCATATCGACGCTGTGCAGTAGGCTAC]




>consensus_8223#1
CCGAAGAAAACCCATAACAAGCGAGAGTTTGTGTTGTGCTCAACCGATTCAACCCTAGCG
TGTGGACGCTGCGACAAAGCCACAAAACATCTTCGTTCGTAATACAACAGCTGTGCGGTG
GTGGTGGTGGTGCTACCTGTACATACCCGCTTTGCCTACCATGGCCGACGAGTATCAGTA
TGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAAAGCACAAGAA
AAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAA
GGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGC
CTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCA
AAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAA
CATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTA
GATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACA
GATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGTGTGAAATAAAAT
AAATCGTTCCATATCGACGCTGTGCAGTAGGCTAC

consensusID : consensus_8223#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 640
fasta sequence

                              [AGCATCTTACCAGCCACAGCTGCAGCTTCGTCTTAGTCACATATTTAACTCCAGCACACTAACCAGCAACCAACAGAATACAATGGCCGCGTTCAAAGTGCTCGGTAGCTTGATTGTCGTCCTGCTGGTCGTTCTCGCCCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGAATAAAATAAATCGTTCCAT]

[+] EMBL BX613948             [AGCATCTTACCAGCCACAGCTGCAGCTTCGTCTTAGTCACATATTTAACTCCAGCACACTAACCAGCAACCAACAGAATACAATGGCCGCGTTCAAAGTGCTCGGTAGCTTGATTGTCGTCCTGCTGGTCGTTCTCGCCCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCA                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX613947             [                                                                                                                                          CCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGAATAAAATAAATCGTTCCAT]




>consensus_8223#2
AGCATCTTACCAGCCACAGCTGCAGCTTCGTCTTAGTCACATATTTAACTCCAGCACACT
AACCAGCAACCAACAGAATACAATGGCCGCGTTCAAAGTGCTCGGTAGCTTGATTGTCGT
CCTGCTGGTCGTTCTCGCCCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTT
CAACGATTCCGACACGAAGAAAAAGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAA
AGTGTTCCGGGCCGTGCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCA
GCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGA
AGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACA
GATGACCCACAAGCAGCGGGTAGAATTGTTCAACATGCATCTCGACAGCCTGACCGAACA
CTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACT
GCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTGATGATGTGA
AGAGATTGTGTGTGTGTGTGAATAAAATAAATCGTTCCAT

consensusID : consensus_8223#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 604
fasta sequence

                              [CCGCGGACGCGTGGGTTCCAATCCGGCAACACAGCATCTTACCAGCCACAG-TGCAGCTTCGTCTTAGTCACATATTTAACTCCAGTAAACCAAACCACCAACCAAAAGCATACGATGGCTTCGTTCAAAGTGCTCGGTAGCTTGATTGTCGTCCTGCTGGTCGTTCTCGCCCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGGTAGCATCTTCGGCAAGCGCAACGGCAACTCTGTCGATTACGAGGGAAATGCGAAGGTCCTGTCCACCATGTGCGAGATTGCGGCCGAAGCCTGCCAGAGCTGGTTTACGCAAGAGCAGAAGTAAGG---A---CCCACCTTCGC-CAGACAGACCGGACAGAGACCGCCCGCTCAACGATTTGATGTGCTTCTACGACTACTTGCAACATA----ACAGCTACAGCGAATTTTGGATTTGAACACACGTGGTTTTGCGTACGAGGACCAAGAACAAGTTTGAAAACAACCCAAAAAAAAAAAAAATGATCAAAAACAGTTTGTGCCACGTGTGCAGAGCAGGGCTGCGAGAAGGCCTTGGTTTCATGTAAACGTTCTATTCCGGAATAAAATGTTTT]

[+] EMBL BM616674             [CCGCGGACGCGTGGGTTCCAATCCGGCAACACAGCATCTTACCAGCCACAG TGCAGCTTCGTCTTAGTCACATATTTAACTCCAGTAAACCAAACCACCAACCAAAAGCATACGATGGCTTCGTTCAAAGTGCTCGGTAGCTTGATTGTCGTCCTGCTGGTCGTTCTCGCCCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGGTAGCATCTTCGGCAAGCGCAACGGCAACTCTGTCGATTACGAGGGAAATGCGAAGGTCCTGTCCACCATGTGCGAGATTGCGGCCGAAGCCTGCCAGAGCTGGTTTACGCAAGAGCAGAAGTAAGG   A   CCCACCTTCGC CAGACAGACCGGACAGAGACCGCCCGCTCAACGATTTGATGTGCTTCTACGACTACTTGCAACATA    ACAGCTACAGCGAATTTTGGATTTGAACACACGTGGTTTTGCGTACGAGGACCAAGAACAAGTTTGAAAACAACCCAAAAAAAAAAAAAATGATCAAAAACAGTTTGTGCCACGTGTGCAGAGCAGGGCTGCGAGAAGGCCTTGGTTTCATGTAAACGTTCTATTCCGG             ]
[+] EMBL BX609025             [                                           AGCCACAGCTGCAGCTTCGTCTTATTTACATATTTAACTCCAGCACACC AACCAGCAACCAACAGAATACAATGGCCGCGTTCAAAGTGCTCGGTAGCTTGATTGTCGTCCTGCTGGTCGTTCTCGCCCTGAGCGGTCACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGGTAGCATCTTCGGCAAGCGCAACGGTAACTCTGTCGATTACGAGGGAAATGCGAAGGTCCTGTCCACCATGTGCGAGATTGCGGCCGAAGCCTGCCAGAGCTGGTTTACGCAAGAGCAGAAGTAAAGCAAAGCTCCTACCTTCGCAGAGACAGACCGGACAGAGACCGCCCGCTCAACGATTTGATGTGCTTCTACGACTACTTGCAACATAAGCTACAGCTACAGCGGATTTTGGATTTGAACACACGTGGTTTTGCGTATGAGGACCAAGAACAAGTTTGAAAACA   C  ACACAAAAAAAATGATCAAAAACAGTTTGTGCCACGTGTGCAGAGCAGGGCTGCGAGAAGGCCTTGGTTTCATGTAAACGTTCTATTCCGGAATAAAATGTTTT]




>consensus_8223#3
CCGCGGACGCGTGGGTTCCAATCCGGCAACACAGCATCTTACCAGCCACAGTGCAGCTTC
GTCTTAGTCACATATTTAACTCCAGTAAACCAAACCACCAACCAAAAGCATACGATGGCT
TCGTTCAAAGTGCTCGGTAGCTTGATTGTCGTCCTGCTGGTCGTTCTCGCCCTGAGCGGT
CACGCCGAGGCCGGCTACCGGAAACCACCCTTCAACGGTAGCATCTTCGGCAAGCGCAAC
GGCAACTCTGTCGATTACGAGGGAAATGCGAAGGTCCTGTCCACCATGTGCGAGATTGCG
GCCGAAGCCTGCCAGAGCTGGTTTACGCAAGAGCAGAAGTAAGGACCCACCTTCGCCAGA
CAGACCGGACAGAGACCGCCCGCTCAACGATTTGATGTGCTTCTACGACTACTTGCAACA
TAACAGCTACAGCGAATTTTGGATTTGAACACACGTGGTTTTGCGTACGAGGACCAAGAA
CAAGTTTGAAAACAACCCAAAAAAAAAAAAAATGATCAAAAACAGTTTGTGCCACGTGTG
CAGAGCAGGGCTGCGAGAAGGCCTTGGTTTCATGTAAACGTTCTATTCCGGAATAAAATG
TTTT

consensusID : consensus_8223#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 586
fasta sequence

                              [CCGCAGAGAGGTGCAAGTGCGTGCAAAGGGAACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAACAAGGCAGCAAAGGTTTACTGCAAGCAGGCAAATAGCATTAGCGAGATCGAGGGACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGCAGCCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGATTCACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCAGCATTTAATTAAACGCACAGCGATCGAAGGCAAACGGGTGGCGTGTAAAACCTCCCCAGTGCCAGTAAAGCCCCAAGACCGGGCTGCAGAGGAACGGGACGACCCCAGGGGGAAACCACCGTACCAAACCAGGGACAGATAGCGCTGCCGACCTCGTCGAAGTAGTAGACCGCATTGGCCCCTGCTTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCAACAAAAGAAACCAAATTTCGAAATGGGGTGTAGATTTCAATGCGACGGTGAGGAAGAAAAGAACAGAAATATCA]

[+] EMBL BM627215             [CCGCAGAGAGGTGCAAGTGCGTGCAAAGGGAACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAACAAGGCAGCAAAGGTTTACTGCAAGCAGGCAAATAGCATTAGCGAGATCGAGGGACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGCAGCCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGATTCACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCAGCATTTAATTAAACGCACAGCGATCGAAGGCAAACGGGTGGCGTGTAAAACCTCCCCAGTGCCAGTAAAGCCCCAAGACCGGGCTGCAGAGGAACGGGACGACCCCAGGGGGAAACCACCGTACCAAACCAGGGACAGATAGCGCTGCCGACCTCGTCGAAGTAGTAGACCGCATTGGCCCCTGCTTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCAACAAAAGAAACCAAATTTCGAAATGGGGTGTAGATTTCAATGCGACGGTGAGGAAGAAAAGAACAGAAATATCA]




>consensus_8223#4
CCGCAGAGAGGTGCAAGTGCGTGCAAAGGGAACGGTACCAAAAAAATAAAACGGCGAACA
ACGAAAAAACAAGGCAGCAAAGGTTTACTGCAAGCAGGCAAATAGCATTAGCGAGATCGA
GGGACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGC
AGCCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGA
TTCACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCAGCATTTAATT
AAACGCACAGCGATCGAAGGCAAACGGGTGGCGTGTAAAACCTCCCCAGTGCCAGTAAAG
CCCCAAGACCGGGCTGCAGAGGAACGGGACGACCCCAGGGGGAAACCACCGTACCAAACC
AGGGACAGATAGCGCTGCCGACCTCGTCGAAGTAGTAGACCGCATTGGCCCCTGCTTCGA
AGTCAACCTCCCCCGATTGAAGTGCAAAACCAACAAAAGAAACCAAATTTCGAAATGGGG
TGTAGATTTCAATGCGACGGTGAGGAAGAAAAGAACAGAAATATCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8223#0      ------------------------------------------------------------
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      -------------------------------CCGAAGAAAACCCATAACAAGCGAGAGTT 29
consensus_8223#2      --------------------------------AGCATCTTACCAGCCACAGCTGCAGCTT 28
consensus_8223#3      CCGCGGACGCGTGGGTTCCAATCCGGCAACACAGCATCTTACCAGCCACAG-TGCAGCTT 59
                                                                                  

consensus_8223#0      ------------------------------------------------------------
consensus_8223#4      --------------------------------------------------CCGCAGAGAG 10
consensus_8223#1      TGTGTTGTGCTCAACCGATTCAACCCTAGCGTGTGGACGCTGCGACAAAGCCACAAA-AC 88
consensus_8223#2      CGTCTTAGTCACAT---ATTTAACTCCAGCACACTAAC-CAGCAAC----CAACAGA-AT 79
consensus_8223#3      CGTCTTAGTCACAT---ATTTAACTCCAGTAAACCAAACCACCAAC-----CAAAAGCAT 111
                                                                                  

consensus_8223#0      ---------------------ACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAAC 39
consensus_8223#4      GTGCAAGTGCGTGCAAAGGGAACGGTACCAAAAAAATAAAACGGCGAACAACGAAAAAAC 70
consensus_8223#1      ATCTTCGTTCGTAATACAACAGCTGTGCGGTGGTGGTGGTGGTGCTACCTGTACATACCC 148
consensus_8223#2      ACAATGGC-CGCGTTCAAAGTGCTCGGTAGCT-TGATTGTCGTCCTGCTGGT-CGTTCTC 136
consensus_8223#3      ACGATGGC-TTCGTTCAAAGTGCTCGGTAGCT-TGATTGTCGTCCTGCTGGT-CGTTCTC 168
                                            *             *       *              *

consensus_8223#0      AAGGCAGCAAAGGTTTACTGCAAGCA-------GGCAAATAGCATTAGC-GAGATCGAGG 91
consensus_8223#4      AAGGCAGCAAAGGTTTACTGCAAGCA-------GGCAAATAGCATTAGC-GAGATCGAGG 122
consensus_8223#1      GCTTTGCCTACCATGGCCGACGAGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAG 208
consensus_8223#2      GCCCTG---AGCGGTCACGCCGAG---------GCCGGCTACCGGAAACCACCCTTCAA- 183
consensus_8223#3      GCCCTG---AGCGGTCACGCCGAG---------GCCGGCTACCGGAAACCACCCTTCAA- 215
                               *       *  * **         *      *     * *        *  

consensus_8223#0      GACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGCAG 151
consensus_8223#4      GACGCCCGCCAACAGCAGAAGGGAGCAACCAACACGGTGTACATTAGCCAGCAAAAGCAG 182
consensus_8223#1      AACGATT-CCGACACGAAGAAAAAGCA--CAAGAAAAAGGACAAGAAAAAGGAAAAGGAG 265
consensus_8223#2      --CGATT-CCGACACGAAGAAAAAGCA--CAAGAAAAAGGACAAGAAAAAGGAAAAGGAG 238
consensus_8223#3      --CGGTAGC--ATCTTCGGCAAGCGCAA-CGGCAACTCTGTCGATTACGAGGGAAATGCG 270
                        **    *  *            ***  *   *       *       **  ***   *

consensus_8223#0      CCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGATT 211
consensus_8223#4      CCGAGCCGAGCCGAGCCGCCACCCCAAAACCCACGTCAAAGCAAGTGTGTGTCCGTGATT 242
consensus_8223#1      --AAAGTGTTCCGGGCCGT-GCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAG 322
consensus_8223#2      --AAAGTGTTCCGGGCCGT-GCTGGAAGACCCTGGCAAGGGCGAGGACCGTCACCAGCAG 295
consensus_8223#3      --AAGGTCCTGTCCACCAT-GTGCGAGATTGCGGCCGAAGCCTGCCAGAGCTGGTTTACG 327
                         *           **        *     *     *   *                  

consensus_8223#0      CACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCA-CATTTAATTAA 270
consensus_8223#4      CACGTGAAGCGACGGAAGCTTTGCCACCCTCAAACACAAACGGGCGCAGCATTTAATTAA 302
consensus_8223#1      CAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAA 382
consensus_8223#2      CAGCAGCAGGGACAGGGGCAGGGGCAGACTAGCGCAGCCTCAGGACGGGTTCTGACGAAA 355
consensus_8223#3      CAAGAGCAGAAGTAAGGACCCACCTTCGCCAGACAGACCGGACAGAGACCGCCCGCTCAA 387
                      **   * **         *         *                             **

consensus_8223#0      ACGCACAG--CGATCGAAGGCAAACGGGTGGCG-TGTAAAACCTCCCCAGTGCCAG---T 324
consensus_8223#4      ACGCACAG--CGATCGAAGGCAAACGGGTGGCG-TGTAAAACCTCCCCAGTGCCAG---T 356
consensus_8223#1      GCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGA---G 439
consensus_8223#2      GCGGAAGAATCGTTTAAAAAGATGCAGGAGAAGATGCAAAACAAACGCATCGTGGA---G 412
consensus_8223#3      CGATTTGATGTGCTTCTACGACTACTTGCAACATAACAGCTACAGCGAATTTTGGATTTG 447
                                 * *   *      *  *         *       *  *           

consensus_8223#0      AAAGCCCCAA-GACCGGGCTGCAGAGGAACGGGACGACCCCAGGGAGAAACCACCGTACC 383
consensus_8223#4      AAAGCCCCAA-GACCGGGCTGCAGAGGAACGGGACGACCCCAGGGGGAAACCACCGTACC 415
consensus_8223#1      AAGGCACAGATGACCCACAAGCAGCGGG-TAGAATTGTTCAACATGCATCTCGACAGCCT 498
consensus_8223#2      AAGGCACAGATGACCCACAAGCAGCGGG-TAGAATTGTTCAACATGCATCTCGACAGCCT 471
consensus_8223#3      AACACACGTG-GTTTTGCGTACGAGGACCAAGAACAAGTTTGAAAACAACCCAAAAA--- 503
                      **  * *    *         *   *     * *             *   *        

consensus_8223#0      AAACCAGGGACAGGTAGCGCTGCCGACCCCGTCGAAGTAGTAGACCGCATTGGCCCCTGC 443
consensus_8223#4      AAACCAGGGACAGATAGCGCTGCCGACCTCGTCGAAGTAGTAGACCGCATTGGCCCCTGC 475
consensus_8223#1      GACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATC 558
consensus_8223#2      GACCGAACACTTTGACATACCGAAGGTGTCCTGGACGAAGTAGATTGGGCCAGCCAGATC 531
consensus_8223#3      AAAAAAAAATGATCAAAAACAGTTTGTGCCACGTGTG---CAGAGCAGGGCTGCGAGAAG 560
                       *   *             * *       *      *    ***        **      

consensus_8223#0      TTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCAACA-AAAGAAACCAAAAATCCCA 502
consensus_8223#4      TTCGAAGTCAACCTCCCCCGATTGAAGTGCAAAACCAACA-AAAGAAACCAAATTTCGAA 534
consensus_8223#1      GGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTG 618
consensus_8223#2      GGGAGGACTGCACTGTTGCGGTGCAATTACGGATTGGCCACAGATACGCTGTACCGTGTG 591
consensus_8223#3      GCCTTGGTTTCA-TGTAAACGTTCTATTCCGGAATA-----AAATGTTTT---------- 604
                                   *       *   * * *  *        * *                

consensus_8223#0      CCACCACCAACCCGCCG-CCCTATCAACCGAGCCGTAAGAAAGCGCGTAATCAAACCTTT 561
consensus_8223#4      ATGGGGTGTAGATTTCA-ATGCGACGGTGAGGAAGAAAAGAACAGAAATATCA------- 586
consensus_8223#1      ATGATGTGAAGAGATTGTGTGTGTGTGTGTGTGAAATAAAATAAATCGTTCCATATCGAC 678
consensus_8223#2      ATGATGTGAAGAGATTGTGTGTGTGTGTG-----AATAAAATAAATCGTTCCAT------ 640
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      CGAGCACGCACACACGCGCTAAGCAATAGCAACAAGCAACAAGTTCGATAACAGCAAGAG 621
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      GCTGTGCAGTAGGCTAC------------------------------------------- 695
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      CCGCAGCCGAACCCAGCCTGCTTAGAGGGAAGAAACAAAACATCTTCGTTCGTAATACAA 681
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      CAGCTGTGCGGTGGTGGTGGTGCTACCTGCACATACCCGCTTTGCCTACCATGGCCGACG 741
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      AGTATCAGTATGTGAGCAAGAGCAAGCTGAAGCTGAAGAACGATTCCGACACGAAGAAAA 801
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      AGCACAAGAAAAAGGACAAGAAAAAGGAAAAGGAGAAAGTGTTCCGGGCCGTGCTGGAAG 861
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      ACCCTGGCAAGGGCGAGGACCGTCACCAGCAGCAGCAGCAGGGACAGGGGCAGGGGCAGA 921
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      CTAGCGCAGCCTCAGGACGGGTTCTGACGAAAGCGGAAGAATCGTTTAAAAGGATGCAGG 981
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      AGAAGATGCAAAACAAACGCATCGTGGAGAAGGCACAGATGACCCACAAGCAGCGGGTAG 1041
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      AATTGTTCAACATGCATCTCGACAGCCTGACCGAACACTTTGACATACCGAAGGTGTCCT 1101
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      GGACGAAGTAGATTGGGCCAGCCAGATCGGGAGGACTGCACTGTTGCGGTGCAATTACGG 1161
consensus_8223#4      ------------------------------------------------------------
consensus_8223#1      ------------------------------------------------------------
consensus_8223#2      ------------------------------------------------------------
consensus_8223#3      ------------------------------------------------------------
                                                                                  

consensus_8223#0      ATTGGCCACAGATACGCTGTACCGTGTGATGATGTGAAGAGATTGTGTGTGTGTGTGAT 1220
consensus_8223#4      -----------------------------------------------------------
consensus_8223#1      -----------------------------------------------------------
consensus_8223#2      -----------------------------------------------------------
consensus_8223#3      -----------------------------------------------------------