cluster # 8235

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Anopheles gambiae
cluster # 8235 cluster # 8235 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8235#0 length = 1672 sequences # 7

consensus_8235#1 length = 623 sequences # 1
consensus_8235#2 length = 382 sequences # 1

consensusID : consensus_8235#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1672
fasta sequence

                              [ATGAATTAATCTTGTCTACTCATGATTAGTTGTGAATAACTCCTCCTAGTTTTAGTCTTTTTTTATTGAAGTGTACTTTTTTTGTCCTAGTTTTAGCGTTTTGTTTTCATATACAAACATCTTCACTTGTTAGATAGATAGGCGAACGACATCAAAGTACTATTACTACTACTACTACTACTACTATCTTCGAACTCTCCATAGTATAAACTCTCTCTCTTCATAGTGTAAACCATAGTGTAAAGGGCTGGACGGAATTTTGGGCTGTGTGTATGGGTGTGCGTGTGTGTGCGGCAAAAGCTCGCAAAACAGACAGCCAACGATGTATTCAACCACTTAGCGATATGCATACTTTATCCCCTACTCCTACCCCAACCATTTTGGGCTGCGTTTAAAGCTTTTGGCCCACCGAGAACGGTTCTAAGCTCCAACAAGTTCCAACCAGTATAGTTACACACCACCAGCACATAATAGGAAATGTAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTTAGGTCAGCGTTTCAAGATTATTCGAATCGAACATATAAATTATGATGCAGCAGCAGCAGCAGCAGCAGCATACAAAAGAGAGGTGAATGTCCAAATGAGAAAAGGAAAGGTAAATGGGACATGAAAAGAATGTGTAAAAACTCGTTAAATGAAGAAAAAAACATAAACTACACATATACACATTTGTCGTTAGTG-AAAAAAAGTAAAAAAAGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATCCCCCGATGTATAAAAAACCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACGGGGGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAAAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACAAACACACCCTGTGGAAAAAAAAACACCCACACACACACACACCTACA-CACGAAGGACGAAGGCGGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATCATTCAACTTTTATGTGTGTTACCGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCACCACGCGGGACTATTCAAATGGTGATGAGTAAAGGAAGGAGTAGTAGGAAGTAGTAGTATAAAAACACACACAAGAATGCATCTTGGAGATATCAACGAGCAGAGAGCAGCGAACCCTCTCCGTCTCATAACACGTACACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTCCAACATGGCGCATTCGCGTGCATGATAAGAAAGATTATGAATTATGTTGGCAATCGATGGAACGGGAGAGATACGTTATGTATTTGAGGGTGTATGT-GCGCGTGTGCGTGTGTGTGTAACCCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCCCACCAACCATCATCACTACCACAACCATCCCCATTGTGGTAAACTCTGGTAAATGAGAAAAATGGAAAATGGATGAATAAAGAAATAGAGAAAGAGAGAGAGAGAGAAAAAACGGCAACCAGCAAACAAAAATAAGAAGAAAAAAAATGTAAGAAATAAACATTTTATTTTGAATC]

[+] EMBL BX615462             [ATGAATTAATCTTGTCTACTCATGATTAGTTGTGAATAACTCCTCCTAGTTTTAGTCTTTTTTTATTGAAGTGTACTTTTTTTGTCCTAGTTTTAGCGTTTTGTTTTCATATACAAACATCTTCACTTGTTAGATAGATAGGCGAACGACATCAAAGTACTATTACTACTACTACTACTACTACTATCTTCGAACTCTCCATAGTATAAACTCTCTCTCTTCATAGTGTAAACCATAGTGTAAAGGGCTGGACGGAATTTTGGGCTGTGTGTATGGGTGTGCGTGTGTGTGCGGCAAAAGCTCGCAAAACAGACAGCCAACGATGTATTCAACCACTTAGCGATATGCATACTTTATCCCCTACTCCTACCCCAACCATTTTGGGCTGCGTTTAAAGCTTTTGGCCCACCGAGAACGGTTCTAAGCTCCAACAAGTTCCAACCAGTATAGTTACACACCACCAGCACATAATAGGAAATGTAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTTAGGTCAGCGTTTCAAGATTATTCGAATCGAACATATAAATTATGATGCAGCAGCAGCAGCAGCAGCAGCATACAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX602545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGTTTCAAGATTATTCGAATCGAACATATAAATTATGATGCAGCAGCAGCAGTAGCAGCAGCATACAAAAGAGAGGTGAATGTCCAAATGAGAAAAGGAAAGGTAAATGGGACATGAAAAGAATGTGTAAAAACTCGTTAAATGAAGAAAAAAACATAAACTACACATATACACATTTGTCGTTAGTG AAAAAAAGTAAAAAAAGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATCCCCCGATGTATAAAAAACCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACGGGGGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAAAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACAAACACACCCTGTGGAAAAAAAAACACCCACACACACACACACCTACA CAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX608576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACATAAACTACACATATACACATTTGTCGTTAGTGAAAAAAAAGTAAAAAAAGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATCCCCCGATGTATAAAAAACCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACGGGGGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAAAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACAAACACACCCTGTGGAAAAAAAAACACCCACACACACACACACCTACA CACGAAGGACGAAGGCGGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAACCATTCAACTTTTATGTGTGTTACCGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCACCACGCGGGACTATTCAAATGGTGATGAGTAAAGGAAGGAGTAGTAGGAAGTAGTAGTATAAAAACACACACAAGAATGCATCTTGGAGATATCAACGAGCAGAGAGCAGCGAACCCTCTCCGTCTCATAACACGTACACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTCCAACATGGCGCATTCGCGTGCATGATAAGAAAGATTATGAATTATGTTGGCAATCGATGGAACGGGAGAGATACGTTATGTATTTGAGGGTGTATGT GCGCGTGTGCGTGTGTGTGTAACCCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCCC                                                                                                                                                                               ]
[+] EMBL AGA282425            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGGAAGGAGACACACGGCAAAGTAGAAACGGGGGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAAAAAGGGATACAACACAAGTAGATTAGTTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACAAACACACCCTGTGGAAAAAAAAACACCCACACACACACACACCTACA CACGAAGGACGAAGGCGGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATCATTCAACTTTTATGTGTGTTACCGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCACCACGCGGGACTATTCAAATGGTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX626909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GATGCTAGAATCAATTACACAAACACACCCTGTGGAAAAAAAAACACCCNCACACACACACNCCTACAGCACGAAGGACGAAGGCGGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTANCATAAATCATTCAACTTTTATGTGTGTTACCGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCNCCACGCGGGACTATTCAAATGGTGATGAGGAAAGGAAGGAGTAGTAGGAAGTAGTAGTATAAAAACACACACAAGAATGCATCTGGGAGATATCAACGAGCAGAGAGCAGCGAACCCTCTCCGTCTCATAACACGTACACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTCCAACATGGCGCATTCGCGTGCATGATAAGAAAGATTATGAATTATGTTGGCAATCGATGGAACGGGAGAGATACGTTATGTATTTGAGGGTGTATGT GCGCNTGTGCGTGTGTGTGTAACCCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCCCACCAACCATCATCACTACCACCACCATCCCCATTGTGGTAAACTCTGGTAAATGAGAAAAAT                                                                                                                 ]
[-] EMBL AGA281309            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGTGCATGATAAGAAAGATTATGAATTATGTTGGCAATCGATGGAACGGGAGAGATACGTTATGTATTTGAGGGTGTATGTGGCGCGTGTGCGTGTGTGTGTAACCCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCCCACCAACCATCATCACTACCACAACCATCCCCATTGTGGTAAACTCTGGTAAATGAGAAAAATGGAAAATGGATGAATAAAGAAATAGAGAAAGAGAGAGAGAGAGAAAAAACGGCAACCAGCAAACAAAAATAAGAAGAAAAAAAATGTAAGAAATAAACATTTTATTTTGAATC]
[+] EMBL BM643205             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGTTATGTATTTGAGGGTGTATGT GCGCGCGTGTGTGTGTGTGTAACCCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCCCACCAACCATCATCACTACCACAACCATCCC                                                                                                                                                 ]




>consensus_8235#0
ATGAATTAATCTTGTCTACTCATGATTAGTTGTGAATAACTCCTCCTAGTTTTAGTCTTT
TTTTATTGAAGTGTACTTTTTTTGTCCTAGTTTTAGCGTTTTGTTTTCATATACAAACAT
CTTCACTTGTTAGATAGATAGGCGAACGACATCAAAGTACTATTACTACTACTACTACTA
CTACTATCTTCGAACTCTCCATAGTATAAACTCTCTCTCTTCATAGTGTAAACCATAGTG
TAAAGGGCTGGACGGAATTTTGGGCTGTGTGTATGGGTGTGCGTGTGTGTGCGGCAAAAG
CTCGCAAAACAGACAGCCAACGATGTATTCAACCACTTAGCGATATGCATACTTTATCCC
CTACTCCTACCCCAACCATTTTGGGCTGCGTTTAAAGCTTTTGGCCCACCGAGAACGGTT
CTAAGCTCCAACAAGTTCCAACCAGTATAGTTACACACCACCAGCACATAATAGGAAATG
TAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTTAGGTCAGCGTTTCAAGATTATTCG
AATCGAACATATAAATTATGATGCAGCAGCAGCAGCAGCAGCAGCATACAAAAGAGAGGT
GAATGTCCAAATGAGAAAAGGAAAGGTAAATGGGACATGAAAAGAATGTGTAAAAACTCG
TTAAATGAAGAAAAAAACATAAACTACACATATACACATTTGTCGTTAGTGAAAAAAAGT
AAAAAAAGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATC
CCCCGATGTATAAAAAACCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACG
GGGGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAAAAAGGGATACAAC
ACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACAAAC
ACACCCTGTGGAAAAAAAAACACCCACACACACACACACCTACACACGAAGGACGAAGGC
GGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATCAT
TCAACTTTTATGTGTGTTACCGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCAC
CACCACGCGGGACTATTCAAATGGTGATGAGTAAAGGAAGGAGTAGTAGGAAGTAGTAGT
ATAAAAACACACACAAGAATGCATCTTGGAGATATCAACGAGCAGAGAGCAGCGAACCCT
CTCCGTCTCATAACACGTACACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTC
CAACATGGCGCATTCGCGTGCATGATAAGAAAGATTATGAATTATGTTGGCAATCGATGG
AACGGGAGAGATACGTTATGTATTTGAGGGTGTATGTGCGCGTGTGCGTGTGTGTGTAAC
CCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCCCACC
AACCATCATCACTACCACAACCATCCCCATTGTGGTAAACTCTGGTAAATGAGAAAAATG
GAAAATGGATGAATAAAGAAATAGAGAAAGAGAGAGAGAGAGAAAAAACGGCAACCAGCA
AACAAAAATAAGAAGAAAAAAAATGTAAGAAATAAACATTTTATTTTGAATC

consensusID : consensus_8235#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence

                              [CCGGTGGAATATAGAGTGTTTTATTTCTTATTATTTAGCCCCGGGTATCAACGTCAACTTACGCTATAGAGAGAGAGAGAGAGAGAAAGAGGGGGAAGAGAAGCGAGAGAAAGATGTAGGGAGAAGGAATGTAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTGAGGTCAGCGTTTCAAGATTATTCGAATCGAACATATAAATTATGATCAGCAGCAGCAGCAGCATACAAAAGAGAGGTGAATGTCCAAATGTGGCGTAAAAGAGAAAAGGAAAGGTAAATGGGACATGAAAAGAATGTGTAAAAACTCGTTAAATGAAGAAACAAAACATAAACTACACATATACACATTTGTCGTTAGTGAAAAAAAGCAAAAAAGGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATCCCCCGATGTATAAAAAATCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACGGGGAGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAGAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACACACACACAT]

[+] EMBL BM627523             [CCGGTGGAATATAGAGTGTTTTATTTCTTATTATTTAGCCCCGGGTATCAACGTCAACTTACGCTATAGAGAGAGAGAGAGAGAGAAAGAGGGGGAAGAGAAGCGAGAGAAAGATGTAGGGAGAAGGAATGTAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTGAGGTCAGCGTTTCAAGATTATTCGAATCGAACATATAAATTATGATCAGCAGCAGCAGCAGCATACAAAAGAGAGGTGAATGTCCAAATGTGGCGTAAAAGAGAAAAGGAAAGGTAAATGGGACATGAAAAGAATGTGTAAAAACTCGTTAAATGAAGAAACAAAACATAAACTACACATATACACATTTGTCGTTAGTGAAAAAAAGCAAAAAAGGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATCCCCCGATGTATAAAAAATCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACGGGGAGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAGAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACACACACACAT]




>consensus_8235#1
CCGGTGGAATATAGAGTGTTTTATTTCTTATTATTTAGCCCCGGGTATCAACGTCAACTT
ACGCTATAGAGAGAGAGAGAGAGAGAAAGAGGGGGAAGAGAAGCGAGAGAAAGATGTAGG
GAGAAGGAATGTAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTGAGGTCAGCGTTTC
AAGATTATTCGAATCGAACATATAAATTATGATCAGCAGCAGCAGCAGCATACAAAAGAG
AGGTGAATGTCCAAATGTGGCGTAAAAGAGAAAAGGAAAGGTAAATGGGACATGAAAAGA
ATGTGTAAAAACTCGTTAAATGAAGAAACAAAACATAAACTACACATATACACATTTGTC
GTTAGTGAAAAAAAGCAAAAAAGGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAAT
CTAATAACAAATCATCCCCCGATGTATAAAAAATCACGCACGGGAAAGGAAGGAGACACA
CGGCAAAGTAGAAACGGGGAGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATG
GGAGAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTA
GAATCAATTACACACACACACAT

consensusID : consensus_8235#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 382
fasta sequence

                              [AAGAATTCGNNNNNNNCACACCTACACACGAAGGACGAAGGCGGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATCATTCAACTTTTATGTGTGTTACGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCACCACGCGGGACTATTCAAATGGTGATGAGGAAAGGAAGGAGTAGTAGGAAGTAGTAGTATAAAAACACACACAAGAATGCATCTGGGAGATATCAACGAGCAGAGAGCAGCGAACCCTCTCCGTCTCATAACACGTACACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTCCAACATGGCGCATTCGCGTTGCATGATAAGAAAGATTATGA]

[+] EMBL AGA282922            [AAGAATTCGNNNNNNNCACACCTACACACGAAGGACGAAGGCGGTCCACGCGACATTAGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATCATTCAACTTTTATGTGTGTTACGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCACCACGCGGGACTATTCAAATGGTGATGAGGAAAGGAAGGAGTAGTAGGAAGTAGTAGTATAAAAACACACACAAGAATGCATCTGGGAGATATCAACGAGCAGAGAGCAGCGAACCCTCTCCGTCTCATAACACGTACACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTCCAACATGGCGCATTCGCGTTGCATGATAAGAAAGATTATGA]




>consensus_8235#2
AAGAATTCGNNNNNNNCACACCTACACACGAAGGACGAAGGCGGTCCACGCGACATTAGG
TTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATCATTCAACTTTTATGTGTGTT
ACGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACCACCACCACGCGGGACTATTCA
AATGGTGATGAGGAAAGGAAGGAGTAGTAGGAAGTAGTAGTATAAAAACACACACAAGAA
TGCATCTGGGAGATATCAACGAGCAGAGAGCAGCGAACCCTCTCCGTCTCATAACACGTA
CACACACACAAGTAAGAGCCCTCAGTCCCCCCCCCCCTCTCCAACATGGCGCATTCGCGT
TGCATGATAAGAAAGATTATGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8235#0      ATGAATTAATCTTGTCTACTCATGATTAGTTGTGAATAACTCCTCCTAGTTTTAGTCTTT 60
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      TTTTATTGAAGTGTACTTTTTTTGTCCTAGTTTTAGCGTTTTGTTTTCATATACAAACAT 120
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      CTTCACTTGTTAGATAGATAGGCGAACGACATCAAAGTACTATTACTACTACTACTACTA 180
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      CTACTATCTTCGAACTCTCCATAGTATAAACTCTCTCTCTTCATAGTGTAAACCATAGTG 240
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      TAAAGGGCTGGACGGAATTTTGGGCTGTGTGTATGGGTGTGCGTGTGTGTGCGGCAAAAG 300
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      CTCGCAAAACAGACAGCCAACGATGTATTCAACCACTTAGCGATATGCATACTTTATCCC 360
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      CTACTCCTACCCCAACCATTTTGGGCTGCGTTTAAAGCTTTTGGCCCACCGAGAACGGTT 420
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      CTAAGCTCCAACAAGTTCCAACCAGTATAGTTACACACCACCAGCACATAATAGGAAATG 480
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      TAGTTAGTTTTTAAGTCCAGATTGATTGATTGAGTTAGGTCAGCGTTTCAAGATTATTCG 540
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      AATCGAACATATAAATTATGATGCAGCAGCAGCAGCAGCAGCAGCATACAAAAGAGAGGT 600
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      GAATGTCCAAATGAGAAAAGGAAAGGTAAATGGGACATGAAAAGAATGTGTAAAAACTCG 660
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      TTAAATGAAGAAAAAAACATAAACTACACATATACACATTTGTCGTTAGTGAAAAAAAGT 720
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      AAAAAAAGGGAAAAGTACATAAGTAAAAGAAAACGACATTGAATCTAATAACAAATCATC 780
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      CCCCGATGTATAAAAAACCACGCACGGGAAAGGAAGGAGACACACGGCAAAGTAGAAACG 840
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      GGGGGGAAAGTAAAGCAAACCCCCAGACAAAACAAAACCAATGGGAAAAAGGGATACAAC 900
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      ACAAGTAGATTAATTTATTTCGTTTCTAGGCACAATGATGCTAGAATCAATTACACAAAC 960
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      ------------------------------------------------------------
                                                                                  

consensus_8235#0      ACACCCTGTGGAAAAAAAAACACCCACACACACACAC-ACCTACACACGAAGGACGAAGG 1019
consensus_8235#2      -----------------AAGAATTCGNNNNNNN-CAC-ACCTACACACGAAGGACGAAGG 41
consensus_8235#1      ------CCGGTGGAATATAGAGTGTTTTATTTCTTATTATTTAGCCCCGGGTATCAACGT 54
                                        *                *  *  **  * **     * * * 

consensus_8235#0      CGGTCCACGCGACATT-AGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATC 1078
consensus_8235#2      CGGTCCACGCGACATT-AGGTTGAAGGGCAGTTAGGAATGAAGAGGAAGTAACATAAATC 100
consensus_8235#1      CAACTTACGCTATAGAGAGAGAGAGAGAGAGAAAGAGGGGGAAGAGAAGCGAGAGAAAG- 113
                      *     **** * *   **   **  *  **  **    * *   ****  * * ***  

consensus_8235#0      ATTCAACTTTTATGTGTGTTACCGTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACC 1138
consensus_8235#2      ATTCAACTTTTATGTGTGTTAC-GTCGTCGTCGTCGTCGTCGTCATAATGCAGTGTGACC 159
consensus_8235#1      ATGTAGGGAGAAGGAATGTAGTTAGTTTTTAAGTCCAGATTGAT-TGATTGAGTGAGGTC 172
                      **  *      * *  ***        *    ***    * *   * **  **** *  *

consensus_8235#0      ACCACCACGCGGGACTATTCAAATGGTGATGAGTAAAGGAAGGAGTAGTAGGAAGTAGTA 1198
consensus_8235#2      ACCACCACGCGGGACTATTCAAATGGTGATGAGGAAAGGAAGGAGTAGTAGGAAGTAGTA 219
consensus_8235#1      AGCGTTTCA--AGATTATTCGAAT--CGAACATATAAATTATGATCAGCAGCA-GCAGCA 227
                      * *    *    ** ***** ***   **  *   **   * **  ** ** * * ** *

consensus_8235#0      GTATAAAAACACACACAAGAATGCATCTTGGAGATATCAACGAGCAGAGAGCAGCGAACC 1258
consensus_8235#2      GTATAAAAACACACACAAGAATGCATCTGGGAGATATCAACGAGCAGAGAGCAGCGAACC 279
consensus_8235#1      GCATACAAA-AGAGAGGTGAATGTCCAAATGTGGCGTAAAAGAGAAAAGGAAAGGTAAAT 286
                      * *** *** * * *   *****       * *   * ** *** * **   **  **  

consensus_8235#0      CTCTCCGTCTCATAACACGTACACACACAC-AAGTAAGAGCCCTCAGTCCCCCCCCCCCT 1317
consensus_8235#2      CTCTCCGTCTCATAACACGTACACACACAC-AAGTAAGAGCCCTCAGTCCCCCCCCCCCT 338
consensus_8235#1      GGGACATGAAAAGAATGTGTAAAAACTCGTTAAATGAAGAAACAAAACATAAACTACACA 346
                          *      * **   *** * ** *   ** * *     *  *       *  * * 

consensus_8235#0      CTCCAACATGGCGCATTCGCGT-GCATGATAAGAAAGATTATGAATTATGTTGGCAATCG 1376
consensus_8235#2      CTCCAACATGGCGCATTCGCGTTGCATGATAAGAAAGATTATGA---------------- 382
consensus_8235#1      TATACACATTTGTCGTTAGTGAAAAAAAGCAAAAAAGGGGAAAAGTACATAAGTAAAAGA 406
                           ****    * ** * *    *    ** ****   *  *                

consensus_8235#0      ATGGAACGGGAGAGATACGTTATGTATTTGAGGGTGTATGTGCGCGTGTGCGTGTGTGTG 1436
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      AAACGACATTGAATCTAATAACAAATCATCCCCCGATGTATAAAAAATCACGCACGGGAA 466
                                                                                  

consensus_8235#0      TAACCCAATAGCATAATACCGCGCACGTGGCAATTGTGAATGGGTGGGGAAATTTCCTCC 1496
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      AGGAAGGAGACACACGGCAAAGTAGAAACGGGGAGGGAAAGTAAAGCAAACCCCCAGACA 526
                                                                                  

consensus_8235#0      CACCAACCATCATCACTACCACAACCATCCCCATTGTGGTAAACTCTGGTAAATGAGAAA 1556
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      AAACAAAACCAATGGGAGAAAGGGATACAACACAAGTAGATTAATTTATTTCGTTTCTAG 586
                                                                                  

consensus_8235#0      AATGGAAAATGGATGAATAAAGAAATAGAGAAAGAGAGAGAGAGAGAAAAAACGGCAACC 1616
consensus_8235#2      ------------------------------------------------------------
consensus_8235#1      GCACAATGATGCTAGAATCAATTACACACACACACAT----------------------- 623
                                                                                  

consensus_8235#0      AGCAAACAAAAATAAGAAGAAAAAAAATGTAAGAAATAAACATTTTATTTTGAATC 1672
consensus_8235#2      --------------------------------------------------------
consensus_8235#1      --------------------------------------------------------