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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8256#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1225 fasta sequence
[GCGGATCGTTTACCACACTGTGCAGTTTTCGAAATGTATAGCCGGCGGTACGTAGCTTGTGGTTTGCTTTGCTTGCTGGTGATTGCCATCGACCAGGGCCATGGACAGGAGCACAAACCGTGCACCACGCCAAACGGGACCGCCGGACGCTGTGTACGGGTACGTGAGTGTGGCTACGTTCTTGACTTACTGCGGAAGGATCTGTTTGCGCACAGCGATACCGTTCACCTGGAGGGGCTGCAGTGTGGCACACGGCCCGATGGAGGGGCTCTCGTATGCTGTCCTGCGTTTGTGAACGAGCCGAACTGTGGGCCGTCCGTTTTTGGCGTTCGTATCATCGGTGGCAACGATACGGAGCTGGGCGAATTTCCTTGGATGGCGTTGCTGCGGTTTCAGGCACGCAATCGTAAGATTCACGGCAACTGTGGCGCATCACTAGTTAGCAAGCGGTTTGTGCTGAGTGCTGCCCACTGTTTCACCGCAGCAAAGAGCAAGGGATGGAAAATCCACTCGGTGCGCGTTGCGGAATGGAATTTCATGAACCACCGTGGAAGCAAAGACTGCAAGCAGGTCAAAGGCTACGACGTACCGATCTGCCGGAAGGATTACGACGTCGCCCGCTTTGTGCAGCATCCCGAGTATCGCGTTAACGCGGGCGTACACGTGAACGATATTGTGCTGATCGAACTGGCAGCGGACGTGGAGTACAATGTCTTTGTCGCACCGATATGTTTGCCCGTTTCCAACGACACGGCCCAGTTACCGTGGGGGTCGTCGGATGATCCAGAAATAGAGTACACAGCAGCAGGCTGGGGTTCGACCGAATCAGGGAAGGAGTCCACCGGTATGTCGTACCAGCTGAAGCAGATCAATCTTCGCGCATTCAACAAGGAGCGGTGCAAGAAGCTGTTCCAGGTGCCCAGTGGGGTCGGTGTTGGGTTGGGCCATATATGTGCTGGTGGCATTCGCGATGAGGACACGTGCCATGGGGATTCGGGCGGGCCGCTGATGGAAGCGGTGGGTGGTGTGTGGTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAAAA]
[+] EMBL AGA276487 [GCGGATCGTTTACCACACTGTGCAGTTTTCGAAATGTATAGCCGGCGGTACGTAGCTTGTGGTTTGCTTTGCTTGCTGGTGATTGCCATCGACCAGGGCCATGGACAGGAGCACAAACCGTGCACCACGCCAAACGGGACCGCCGGACGCTGTGTACGGGTACGTGAGTGTGGCTACGTTCTTGACTTACTGCGGAAGGATCTGTTTGCGCACAGCGATACCGTTCACCTGGAGGGGCTGCAGTGTGGCACACGGCCCGATGGAGGGGCTCTCGTATGCTGTCCTGCGTTTGTGAACGAGCCGAACTGTGGGCCGTCCGTTTTTGGCGTTCGTATCATCGGTGGCAACGATACGGAGCTGGGCGAATTTCCTTGGATGGCGTTGCTGCGGTTTCAGGCACGCAATCGTAAGATTCACGGCAACTGTGGCGCATCACTAGTTAGCAAGCGGTTTGTGCTGAGTGCTGCCCACTGTTTCACCGCAGCAAAGAGCAAGGGATGGAAAATCCACTCGGTGCGCGTTGCGGAATGGAATTTCATGAACCACCGTGGAAGCAAAGACTGCAAGCAGGTCAAAGGCTACGACGTACCGATCTGCCGGAAGGATTACGACGTCGCCCGCTTTGTGCAGCATCCCGAGTATCGCGTTAACGCGGGCGTACACGTGAACGATATTGTGCTGATCGAACTGGCAGCGGACGTGGAGTACAATGTCTTTGTCGCACCGATATGTTTGCCCGTTTCCAACGACACGGCCCAGTTACCGTGGGGGTCGTCGGATGATCCAGAAATAGAGTACACAGCAGCAGGCTGGGGTTCGACCGAATCAGGGAAGGAGTCCACCGGTATGTCGTACCAGCTGAAGCAGATCAATCTTCGCGCATTCAACAAGGAGCGGTGCAAGAAGCTGTTCCAGGTGCCCAGTGGGGTCGGTGTTGGGTTGGGCCATATATGTGCTGGTGGCATTCGCGATGAGGACACGTGCCATGGGGATTCGGGCGGGCCGCTGATGGAAGCGGTGGGTGGTGTGTGGTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAA ]
[+] EMBL AGA284904 [ GGTACGTAGCTTGTGGTTTGCTTTGCTTGCTGGTGATTGCCATCGACCAGGGCCATGGACAGGAGCACAAACCGTGCATCACGCCAAACTGGACCGCCGGACGCTGTGTACGGGTACGTGCGTGTGG ]
[+] EMBL AGA282211 [ CGACCAGGGCCATGGACAGGAGCACAAACCGTGCACCACGCCAAACGGGACCGCCGGACGCTGTGTACGGGTACGTGAGTGTGGCTACGTTCTTGACTTACTGCGGAAGGATCTGTTTGCGCACAGCGATACCGTTCACCTGGAGGGGCTGCAGTGTGGCACACGGCCCGATGGAGGGGCTCTCGTATGCTGTCCTGCGTTTGTGAACGAGCCGAACTGTGGGCCGTCCGTTTTTGGCGTTCGTATCATCGGTGGCAACGATACGGAGCTGGGCGAATTTCCTTGGATGGCGTTGCTGCGGTTTCAGGCACGCAATCGTAAGATTCACG ]
[+] EMBL AGA284885 [ GCTGTGTACGGGTACGTGAGTGTGGCTACGTTCTTGACTTACTGCGGAAGGATCTGTTTGCGCACAGCGATACCGTTCACCTGGAGGGGCTGCAGTGTGGCACACGGCCCGATGGAGGGGCTCTCGTATGCTGTCCTGCGTTTGTGAACGAGCCGAACTGTGGGCCGTCCGTTTTTGGCG ]
[-] EMBL AGA280508 [ GCGCATTCAACAAGGAGCGGTGCAAGAAGCTGTTCCAGGTGCCCAGTGGGGTCGGTGTTGGGTTGGGCCATATATGTGCTGGTGGCATTCGCGATGAGGACACGTGCCATGGGGATTCGGGCGGGCCGCTGATGGAAGCGGTGGGTGGTGTGTGGTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAAA ]
[-] EMBL AGA283596 [ GGGTCGGTGTTGGGTTGGGCCATATATGTGCTGGTGGCATTCGCGATGAGGACACGTGCCATGGGGATTCGGGCGGCCCGCTGATGGAAGCGGTGGGTGGTGTGTGGTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTTAAAAAAAA]
[-] EMBL AGA280728 [ CTGGTGGCATTCGCGATGAGGACACGTGCCATGGGGATTCGGGCGGGCCGCTGATGGAAGCGGTGGGTGGTGTGTGGTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAAA ]
consensusID : consensus_8256#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 228 fasta sequence
[CCGCCACCATTTTTTTTTTTTTTTTTTTGTGTGTTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAAAAA]
[-] EMBL AGA284496 [CCGCCACCATTTTTTTTTTTTTTTTTTTGTGTGTTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAAA ]
[+] EMBL AGA285799 [ TTTTTTTTTTTTTTTTTTTGTGTGTTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGACGGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATGTTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATGAGGACTTGTTGAGTGTAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8256#0 GCGGATCGTTTACCACACTGTGCAGTTTTCGAAATGTATAGCCGGCGGTACGTAGCTTGT 60
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 GGTTTGCTTTGCTTGCTGGTGATTGCCATCGACCAGGGCCATGGACAGGAGCACAAACCG 120
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 TGCACCACGCCAAACGGGACCGCCGGACGCTGTGTACGGGTACGTGAGTGTGGCTACGTT 180
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 CTTGACTTACTGCGGAAGGATCTGTTTGCGCACAGCGATACCGTTCACCTGGAGGGGCTG 240
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 CAGTGTGGCACACGGCCCGATGGAGGGGCTCTCGTATGCTGTCCTGCGTTTGTGAACGAG 300
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 CCGAACTGTGGGCCGTCCGTTTTTGGCGTTCGTATCATCGGTGGCAACGATACGGAGCTG 360
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 GGCGAATTTCCTTGGATGGCGTTGCTGCGGTTTCAGGCACGCAATCGTAAGATTCACGGC 420
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 AACTGTGGCGCATCACTAGTTAGCAAGCGGTTTGTGCTGAGTGCTGCCCACTGTTTCACC 480
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 GCAGCAAAGAGCAAGGGATGGAAAATCCACTCGGTGCGCGTTGCGGAATGGAATTTCATG 540
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 AACCACCGTGGAAGCAAAGACTGCAAGCAGGTCAAAGGCTACGACGTACCGATCTGCCGG 600
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 AAGGATTACGACGTCGCCCGCTTTGTGCAGCATCCCGAGTATCGCGTTAACGCGGGCGTA 660
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 CACGTGAACGATATTGTGCTGATCGAACTGGCAGCGGACGTGGAGTACAATGTCTTTGTC 720
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 GCACCGATATGTTTGCCCGTTTCCAACGACACGGCCCAGTTACCGTGGGGGTCGTCGGAT 780
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 GATCCAGAAATAGAGTACACAGCAGCAGGCTGGGGTTCGACCGAATCAGGGAAGGAGTCC 840
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 ACCGGTATGTCGTACCAGCTGAAGCAGATCAATCTTCGCGCATTCAACAAGGAGCGGTGC 900
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 AAGAAGCTGTTCCAGGTGCCCAGTGGGGTCGGTGTTGGGTTGGGCCATATATGTGCTGGT 960
consensus_8256#1 ------------------------------------------------------------
consensus_8256#0 GGCATTCGCGATGAGGACACGTGCCATGGGGATTCGGGCGGGCCGCTGATGGAAGCGGTG 1020
consensus_8256#1 --------------------------------------CCGCCACCATTTTTTTTTTTTT 22
* * * * * *
consensus_8256#0 GGTGGTGTGTGGTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGAC 1080
consensus_8256#1 TTTTTTGTGTGTTATTTGGCCGGCATAACCAGCTTCGGGTGGCCTCGCTGTGGCCGGGAC 82
* ****** ************************************************
consensus_8256#0 GGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATG 1140
consensus_8256#1 GGTGTGCCAGGGGTGTACACGAACATTAGCCACTACATGGGATGGCTGGAGCGGGAGATG 142
************************************************************
consensus_8256#0 TTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATG 1200
consensus_8256#1 TTCCGTGGAATTTTGGCGTAGAATTTAGTTCTGCTCGCGCTGTTCGGTAAACAATAAATG 202
************************************************************
consensus_8256#0 AGGACTTGTTGAGTGTAAAAAAAAA- 1225
consensus_8256#1 AGGACTTGTTGAGTGTAAAAAAAAAA 228
*************************
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||