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Anopheles gambiae
cluster # 8289 cluster # 8289       Sequences # 9       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8289#0 length = 948 sequences # 6  
consensus_8289#1 length = 703 sequences # 1  
consensus_8289#2 length = 631 sequences # 1  
consensus_8289#3 length = 587 sequences # 1  

consensusID : consensus_8289#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 948
fasta sequence
                              [GTTTACAAATTACTTACAAATTTTTCATACTTCTTGTATTTCTTACAATGCCACAACACGACAATACACTCCAACCGACATTGCTTCCCATTTCTTATTAAGTGAGTTTTTCAGGCGAAGATAGGATCACCTCGTCATTGTCCGAACTGGCAGCATCGTCCTCCTCCTCCAGCACCAGCGGCTCGTCGCACGCCATCTTCTCCTCCACGATCGGTACCGGAGCAACGTCCATCGCCTCCT-CCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTCGGATCCA-GCTTGTTCTGCAGCTCGGCGATGGAGCGCATGAGCACG-CTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAGCC-GGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGAGCGTATATTACAATTTTTACCAGCAAAACTATTTTTGTTAGCACGACGGAACCAGCGCGCTTGCTTTTGTTTGTGTACAGCGTCAAACATGTCAAACTTTGTTTCCAGTAGGCCA]

[-] EMBL CNS09DKC             [GTTTACAAATTACTTACAAATTTTTCATACTTCTTGTATTTCTTACAATGCCACAACACGACAATACACTCCAACCGACATTGCTTCCCATTTCTTATTAAGTGAGTTTTTCAGGCGAAGATAGGATCACCTCGTCATTGTCCGAACTGGCAGCATCGTCCTCCTCCTCCAGCACCAGCGGCTCGTCGCACGCCATCTTCTCCTCCACGATCGGTACCGGAGCAACGTCCATCGCCTCCT CCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTTGGATCCA GCTTGTTCTGCAGCTCGGCGATGGAGCGCATGAGCACG CTGAAGTCTTTCTTCTTCGTCTCCAG TTTCGCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAGCC GGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCGTTACGAGCGTATATTACAATTTTTACCAGCAAAACTATTTTTGTTAGCACGACGGAACCAGCGCGCTTGCTTTTGTTTGTGTACAGCGTCAAACATGTCAA                    ]
[+] EMBL CNS09DKD             [    ACAAATTACTTACAACGACTGCATACTTCTTGTATTTCTTACAATGCCACAACACGACAATACACTCCAACCGACATTGCTTCCCATTTCTTATTAAGTGAGTATTTCAGGCGAAGATAGGATCACCTCGTCATTGTCCGAACTGGCAGCATCGTCCTCCTCCTCCAGCACCAGCGGCTCGTCGCACGCCATCTTCTCCTCCACGATCGGTACCGGAGCAACGTCCATCGCCTCCT CCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTTGGATCCA GCTTGTTCTGCAGCTCGGCGATGGAGCGCATGAGCACG CTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACAATTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAGCC GGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCGTTACGAGCGTATATTACAATTTTTACCAGCAAAACTATTTTTGTTAGCACGACGGAACCAGCGCGCTTGCTTTTGTTTGTGTACAGCGTCAAAAATGTCAAACTTTGTTTCCAGTAGGCCA]
[-] EMBL CNS08PH3             [                                 TTGTATTTCTTACAATTCCACAACACGACAATACACTCCAGTCGACATTGCTCCCCATTTCTTATTAAGTGAGTTTTTCAGGCGAAGATAGGATCACCTCGTCATTGTCCGAACTGGCAGCATCGTCCTCCTCCTCCAGCACCAGCGGCTCGTCGCACGCCATCTTCTCCTCCACGATCGGTACCGGAGCAACGTCCATTGCCTCCT CCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTCGGATCCAGGCTTGTTCTGCAGCTCGGCAATGGAGCGCATGAGCACGTCTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGGAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAACC GGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGAGCGTATATTACAATTTTTACTAGCAAAACTATTTTTATTAGCAGGACGGAACCAGCGCGCTTGCT                                                  ]
[-] EMBL BM584732             [                                                                                                                                                                                                                                     CATCGCCTCCTGCCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTCGGATCCA GCTTGTTCTGCAGCTCGGCGATGGAGCGCATGAGCACG CTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTTTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAGCC GGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGAGCGTATATTACAATTTTTACTAGCAAAACTATTTTTATTAGCAGGACcgg                                                                 ]
[-] EMBL BX619373             [                                                                                                                                                                                                                                                       AGGCGCTTGTACTCGTCGCCGACATGGTCGGATCCA GCTTGTTCTGCAGCTCGGCGATGGAGCGCATGAGCACG CTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGCTCCAGGTCGNNCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTTTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGT                                                                                                                                                                                                 ]
[-] EMBL BX607239             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAGCCTGGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTT                                                                                                                        ]


>consensus_8289#0 GTTTACAAATTACTTACAAATTTTTCATACTTCTTGTATTTCTTACAATGCCACAACACG ACAATACACTCCAACCGACATTGCTTCCCATTTCTTATTAAGTGAGTTTTTCAGGCGAAG ATAGGATCACCTCGTCATTGTCCGAACTGGCAGCATCGTCCTCCTCCTCCAGCACCAGCG GCTCGTCGCACGCCATCTTCTCCTCCACGATCGGTACCGGAGCAACGTCCATCGCCTCCT CCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTCGGATCCAGCTTGTTCTGCAGCTCGG CGATGGAGCGCATGAGCACGCTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGCTCCAGGT CGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCG TCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGT TCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTG CCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCT GCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGG CGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATT TGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGA TTTGTAGCCGGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGAGCGTATA TTACAATTTTTACCAGCAAAACTATTTTTGTTAGCACGACGGAACCAGCGCGCTTGCTTT TGTTTGTGTACAGCGTCAAACATGTCAAACTTTGTTTCCAGTAGGCCA



consensusID : consensus_8289#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 703
fasta sequence
                              [CCGCGTGAGAGTGACCAGTGAGACGGGCGACGTTTCGTTCTACCGTTGTTTGTTGTTGTTGTTGGCGAAACAAAAGACGGTGCCGAGTTTCGTTGCCTCGCAACAACACCCATCCCCGATCCCCACGGGCCCATCCAATCACGACAGTCAAACAGCGGACCCGCCAGCACTCAATCTTACCGAGGCACAATATTAGTACTTGATCTGACCTGATCAGTCTTGTTCGTCGTGTGTTTGTGTGTGTGTTTGTGATATTGTGATTCGAGTGCGAACAGCGAAAGTGTCCGTGAGTCAGAGCGGGCGGGCCAAAAGGAAGGAGAACACAATGGTTGATCGCTTTTAGAAAGAAAAAAAGCCCCACACTCTCTGCCGTTGTGTGCGTCTCTGTGCTGTGATTTGCTGTGCGTGGAACGACGATCGAAAAGCCCAGTGTCCCCCAGTGAGTGTGAGTGTGTATGTAAAATTAATAAAACCCATAGACAAAGCGTGTGTGTGTGTGTGAGTGAAGGTAAAAAAAAATCATTTGGCGAAGCAGCAGCGAAGTTCCGAGAAGCGAGCTCCCGGCACCGCAAAACAATCGTTTTGACAGCGCGTGAGCGTGAGCAGAGGCAGCTAGTAGTGAGCGCGCGCCGCCCGCCTCGTGAGCGAACGGAAAAACGTCAGGCGTCATTCTCACCGTCGTCGTCGTCGTCGTCGCAGCGAG]

[+] EMBL BM627401             [CCGCGTGAGAGTGACCAGTGAGACGGGCGACGTTTCGTTCTACCGTTGTTTGTTGTTGTTGTTGGCGAAACAAAAGACGGTGCCGAGTTTCGTTGCCTCGCAACAACACCCATCCCCGATCCCCACGGGCCCATCCAATCACGACAGTCAAACAGCGGACCCGCCAGCACTCAATCTTACCGAGGCACAATATTAGTACTTGATCTGACCTGATCAGTCTTGTTCGTCGTGTGTTTGTGTGTGTGTTTGTGATATTGTGATTCGAGTGCGAACAGCGAAAGTGTCCGTGAGTCAGAGCGGGCGGGCCAAAAGGAAGGAGAACACAATGGTTGATCGCTTTTAGAAAGAAAAAAAGCCCCACACTCTCTGCCGTTGTGTGCGTCTCTGTGCTGTGATTTGCTGTGCGTGGAACGACGATCGAAAAGCCCAGTGTCCCCCAGTGAGTGTGAGTGTGTATGTAAAATTAATAAAACCCATAGACAAAGCGTGTGTGTGTGTGTGAGTGAAGGTAAAAAAAAATCATTTGGCGAAGCAGCAGCGAAGTTCCGAGAAGCGAGCTCCCGGCACCGCAAAACAATCGTTTTGACAGCGCGTGAGCGTGAGCAGAGGCAGCTAGTAGTGAGCGCGCGCCGCCCGCCTCGTGAGCGAACGGAAAAACGTCAGGCGTCATTCTCACCGTCGTCGTCGTCGTCGTCGCAGCGAG]


>consensus_8289#1 CCGCGTGAGAGTGACCAGTGAGACGGGCGACGTTTCGTTCTACCGTTGTTTGTTGTTGTT GTTGGCGAAACAAAAGACGGTGCCGAGTTTCGTTGCCTCGCAACAACACCCATCCCCGAT CCCCACGGGCCCATCCAATCACGACAGTCAAACAGCGGACCCGCCAGCACTCAATCTTAC CGAGGCACAATATTAGTACTTGATCTGACCTGATCAGTCTTGTTCGTCGTGTGTTTGTGT GTGTGTTTGTGATATTGTGATTCGAGTGCGAACAGCGAAAGTGTCCGTGAGTCAGAGCGG GCGGGCCAAAAGGAAGGAGAACACAATGGTTGATCGCTTTTAGAAAGAAAAAAAGCCCCA CACTCTCTGCCGTTGTGTGCGTCTCTGTGCTGTGATTTGCTGTGCGTGGAACGACGATCG AAAAGCCCAGTGTCCCCCAGTGAGTGTGAGTGTGTATGTAAAATTAATAAAACCCATAGA CAAAGCGTGTGTGTGTGTGTGAGTGAAGGTAAAAAAAAATCATTTGGCGAAGCAGCAGCG AAGTTCCGAGAAGCGAGCTCCCGGCACCGCAAAACAATCGTTTTGACAGCGCGTGAGCGT GAGCAGAGGCAGCTAGTAGTGAGCGCGCGCCGCCCGCCTCGTGAGCGAACGGAAAAACGT CAGGCGTCATTCTCACCGTCGTCGTCGTCGTCGTCGCAGCGAG



consensusID : consensus_8289#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGTTCACACACACACATGGGTCGACAACCTACAGACACAGACAGCGTTAGGTGGACAAAGGATTCGTTACGATCCGGATCGTGTGGTGATATGTTGTCATCGTCATCTCCGTGTGTGAGTGTGAGTTGGTATGTGTACGCCGCGGGCTGCCGAGGCCCGTCTTTTTTTCCCCTTCGTCCGGAAGTCATTTGTCATCAATTTACTATATTTTGGCATCGTTCTTTGCTAATTCGTGTATTTTTTTAAGTTTTAAGATTTAAAAAGTATAAAATTTTAATGCGTTTGTTTGTGTTTGGACGGTACACAGCAAGGATAAGAACCCCGCGTGGAGATGCGTTTGTGTGTGTGCGTGTGTGTTTGTGTGCTTTAGTGTTTGGAAAACCCTTTAAGTGGATATGATGGACTTACAAAGAACGTTATCAATCAGTAATGGCAGAGAGCACCGAATCGCCGGCCGAGAAACAATCGTCCAAAGCAAACGGGGTACAACAGCTAATCAGAGTGTTTCATTATCACGCTGTCGAACTTGTGGGAAGATTTTAGGAATCCTCTATGGGGGGAGAGGAGATGTTTTCCCAAAAAAAGGAATCAGAAAGGAGAGGATAG]

[+] EMBL BM591084             [CCGCGGACGCGTGGGCGGACGCGTGGGTTCACACACACACATGGGTCGACAACCTACAGACACAGACAGCGTTAGGTGGACAAAGGATTCGTTACGATCCGGATCGTGTGGTGATATGTTGTCATCGTCATCTCCGTGTGTGAGTGTGAGTTGGTATGTGTACGCCGCGGGCTGCCGAGGCCCGTCTTTTTTTCCCCTTCGTCCGGAAGTCATTTGTCATCAATTTACTATATTTTGGCATCGTTCTTTGCTAATTCGTGTATTTTTTTAAGTTTTAAGATTTAAAAAGTATAAAATTTTAATGCGTTTGTTTGTGTTTGGACGGTACACAGCAAGGATAAGAACCCCGCGTGGAGATGCGTTTGTGTGTGTGCGTGTGTGTTTGTGTGCTTTAGTGTTTGGAAAACCCTTTAAGTGGATATGATGGACTTACAAAGAACGTTATCAATCAGTAATGGCAGAGAGCACCGAATCGCCGGCCGAGAAACAATCGTCCAAAGCAAACGGGGTACAACAGCTAATCAGAGTGTTTCATTATCACGCTGTCGAACTTGTGGGAAGATTTTAGGAATCCTCTATGGGGGGAGAGGAGATGTTTTCCCAAAAAAAGGAATCAGAAAGGAGAGGATAG]


>consensus_8289#2 CCGCGGACGCGTGGGCGGACGCGTGGGTTCACACACACACATGGGTCGACAACCTACAGA CACAGACAGCGTTAGGTGGACAAAGGATTCGTTACGATCCGGATCGTGTGGTGATATGTT GTCATCGTCATCTCCGTGTGTGAGTGTGAGTTGGTATGTGTACGCCGCGGGCTGCCGAGG CCCGTCTTTTTTTCCCCTTCGTCCGGAAGTCATTTGTCATCAATTTACTATATTTTGGCA TCGTTCTTTGCTAATTCGTGTATTTTTTTAAGTTTTAAGATTTAAAAAGTATAAAATTTT AATGCGTTTGTTTGTGTTTGGACGGTACACAGCAAGGATAAGAACCCCGCGTGGAGATGC GTTTGTGTGTGTGCGTGTGTGTTTGTGTGCTTTAGTGTTTGGAAAACCCTTTAAGTGGAT ATGATGGACTTACAAAGAACGTTATCAATCAGTAATGGCAGAGAGCACCGAATCGCCGGC CGAGAAACAATCGTCCAAAGCAAACGGGGTACAACAGCTAATCAGAGTGTTTCATTATCA CGCTGTCGAACTTGTGGGAAGATTTTAGGAATCCTCTATGGGGGGAGAGGAGATGTTTTC CCAAAAAAAGGAATCAGAAAGGAGAGGATAG



consensusID : consensus_8289#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 587
fasta sequence
                              [AGCTTTCGCCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGATCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAACCGGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGAGCGTATATTACAATTTTTACTAGCAAAACTATTTTTATTAGCAGGACGGAACCAGCGCGCTGCTTTTGTTTGTGTACAGCGTNACCTGGGCCGATTC]

[-] EMBL AL934596             [AGCTTTCGCCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGATCCAGGTTCTGCTTCAACGATTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATCGTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCGGTTCCATCACCATCGATTTGTAACCGGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGAGCGTATATTACAATTTTTACTAGCAAAACTATTTTTATTAGCAGGACGGAACCAGCGCGCTGCTTTTGTTTGTGTACAGCGTNACCTGGGCCGATTC]


>consensus_8289#3 AGCTTTCGCCTCCAGGTCGGCCCTGTTTTCCTTCAGCTGATCCAGGTTCTGCTTCAACGA TTCCAGCTCCTGCACCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCAT GTCGTACTCCATCCGGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTG TACGATCTGTGCCTTTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATA GTTTTTCAGCTCCTGCTGCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTC GCACTGTGCTAGCTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCATC GTTCGAATTACACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCC GGTTCCATCACCATCGATTTGTAACCGGCGTTTGATAACCTCTTCATCAGACATAATAGC AGCTTTACGAGCGTATATTACAATTTTTACTAGCAAAACTATTTTTATTAGCAGGACGGA ACCAGCGCGCTGCTTTTGTTTGTGTACAGCGTNACCTGGGCCGATTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8289#0      GTTTACAAATTACTTACAAATTTTTCATACTTCTTGTATTTCTTACAATGCCACAACACG 60
consensus_8289#3      ------------------------------------------------------------
consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
                                                                                  

consensus_8289#0      ACAATACACTCCAACCGACATTGCTTCCCATTTCTTATTAAGTGAGTTTTTCAGGCGAAG 120
consensus_8289#3      ------------------------------------------------------------
consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
                                                                                  

consensus_8289#0      ATAGGATCACCTCGTCATTGTCCGAACTGGCAGCATCGTCCTCCTCCTCCAGCACCAGCG 180
consensus_8289#3      ------------------------------------------------------------
consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
                                                                                  

consensus_8289#0      GCTCGTCGCACGCCATCTTCTCCTCCACGATCGGTACCGGAGCAACGTCCATCGCCTCCT 240
consensus_8289#3      ------------------------------------------------------------
consensus_8289#1      ------------------------------------------------------------
consensus_8289#2      ------------------------------------------------------------
                                                                                  

consensus_8289#0      CCTCGCAGGCGCTTGTACTCGTCGCCGACATGGTCGGATCCAGCTTGTTCTGCAGCTCGG 300
consensus_8289#3      ------------------------------------------------------------
consensus_8289#1      ----------CCGCGTGAGAGTGACCAGTGAGACGGGCGACGTTTCGTTCTACCGTTGTT 50
consensus_8289#2      ----------CCGCGGACGCGTGGGCGGACGCGTGGGTTCACACACACACATGGGTCGAC 50
                                                                                  

consensus_8289#0      CGATGGAGCGCATGAGCACGCTGAAGTCTTTCTTCTTCGTCTCCAGCTTTCGC-TCCAGG 359
consensus_8289#3      --------------------------------------------AGCTTTCGCCTCCAGG 16
consensus_8289#1      TGTTGTTGTTGTTGGCGAAACAAAAGACGGTGCCGAGTTTCGTTGCCTCGCAACAACAC- 109
consensus_8289#2      AACCTACAGACACAGACA-GCGTTAGGTGGACAAAGGATTCGTTACGATCCGG-ATCGTG 108
                                                                        *     *   

consensus_8289#0      TCGGCCCTGTTTTCCTTCAGCTGGTCCAGGTTCTGC--TTCAACGATTCCAGCTCCTGCA 417
consensus_8289#3      TCGGCCCTGTTTTCCTTCAGCTGATCCAGGTTCTGC--TTCAACGATTCCAGCTCCTGCA 74
consensus_8289#1      CCATCCCCGATCCCCACGGGCCCATCCAATCACGACAGTCAAACAGCGGACCCGCCAGCA 169
consensus_8289#2      TGGTGATATGTTGTCATCGTCATCTCCGTGTGTGAG----TGTGAGTTGGTATGTGTACG 164
                                *   *     *   ***                               * 

consensus_8289#0      CCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCC 477
consensus_8289#3      CCGTCTTCTTACGATCCGGCTGCTGGTTGATCGTTTTCGCCAGCATGTCGTACTCCATCC 134
consensus_8289#1      CTCAATCTTACCGAGGCACAATATTAGTACTTGATCTGACCTGATCAGTCTTGTTCGTCG 229
consensus_8289#2      CCGCGGGCTGCCGAGGC-CCGTCTTTTTTTCCCCTTCGTCCGGAA----GTCATTTGTCA 219
                      *       *  ***  *      *   *      *    ** *       *  *   ** 

consensus_8289#0      GGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCT 537
consensus_8289#3      GGTTCTTGCGGATCTTTTTGGCCAGCACCAGGTTCTGCTTGCTCTGTACGATCTGTGCCT 194
consensus_8289#1      TGTGTTTGTGTGTGTGTTTG--TGATATTGTGATTCGAGTGCGAACAGCGAAA-GTGTCC 286
consensus_8289#2      TCAATTTAC---TATATTT---TGGCATCGTTCTTTGC----------TAATTCGTGTAT 263
                           **     * * ***       *      *  *             *   ***   

consensus_8289#0      TTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCT 597
consensus_8289#3      TTGCCGTTTCGATGCCCGTCTCTATCGTGTCCGAGATGGTGGCATAGTTTTTCAGCTCCT 254
consensus_8289#1      GTGA-GTCAGAGCGGGCGGGCCAAAAGGA---AGGAGAACACAATGGTTGATCGCTTTTA 342
consensus_8289#2      TTT---TTTAAGTTTTAAGATTTAAAAAGTATAAAATTTTAATGCGTTTGTTTGTGTTTG 320
                       *    *                *           *           **  *    *   

consensus_8289#0      GCT-GCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTG-CTAG 655
consensus_8289#3      GCT-GCATCACGGTCGCATAAAAGTCGGACTTTTTCATGTCAAACTCGCACTGTG-CTAG 312
consensus_8289#1      GAAAGAAAAAAAGCCCCACACTCTCTGCCGTTGTGTGCGTC---TCTGTGCTGTGATTTG 399
consensus_8289#2      GACGGTACACAGCAAGGATAAGAACCCCGCGTGGAGATGCG---TTTGTG-TGTG----- 371
                      *   * *          * *           *      *        *   ****     

consensus_8289#0      CTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCAT-CGTTCGAATTAC 714
consensus_8289#3      CTGGGCGAGCAGCCGATCGTATATTGGTTGACTGTTGTCTGAAGCAT-CGTTCGAATTAC 371
consensus_8289#1      CTGTGCGTGGAAC-GACGATCGAAAAGCCCAGTGTCCCCCAGTGAGTGTGAGTGTGTATG 458
consensus_8289#2      -TGCGTGTG-------TGTTTGTGTGCTTTAGTGTTTGGAAAACCCTTTAAGTGGATATG 423
                       ** * * *          *          * ***           *      *  *   

consensus_8289#0      ACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCG-GTTCCATCA 773
consensus_8289#3      ACCATTTGATAAACGTTTTCAGCAAATCGTTCAAGCGTCTGTCGTCGCCG-GTTCCATCA 430
consensus_8289#1      TAAAATTAATAAAACCCATAGACAAAGCGTGTGTGTGTGTGTGAGTGAAG-GTAA-AAAA 516
consensus_8289#2      ATGGACTTACAAAGAACGTTATCAATCAGTAATGGCAGAGAGCACCGAATCGCCGGCCGA 483
                            * * ***     *   ***   **    *           *    *       *

consensus_8289#0      CCATCGATTTGTAGCCGGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGA 833
consensus_8289#3      CCATCGATTTGTAACCGGCGTTTGATAACCTCTTCATCAGACATAATAGCAGCTTTACGA 490
consensus_8289#1      AAATCATTTGGCGA--AGCAGCAGCGAAGTTC--CGAGAAGCGAGCTCCCGGCACCGCAA 572
consensus_8289#2      GAAACAATCGTCCAA-AGCA--AACGGGGTAC---AACAGCTAA--TCAGAGTGTTTCAT 535
                        * *  *         **            *      *       *    *     *  

consensus_8289#0      GCGTATATTACAATTTTTACCA-GCAAAACTATTTTTGTTAGCACGACGGAACCAGCGCG 892
consensus_8289#3      GCGTATATTACAATTTTTACTA-GCAAAACTATTTTTATTAGCAGGACGGAACCAGCGCG 549
consensus_8289#1      A-----ACAATCGTTTTGACAGCGCGTGAGCGTGAGCAGAGGCAGCTAGTAGTGAGCGCG 627
consensus_8289#2      T-----ATCACGCTGTCGAACTTGTGGGAAGATTTTAGGAATCCTCTATGGGGGGAGAGG 590
                            *  *   * *  *    *    *   *         *                *

consensus_8289#0      CTTGCTTTTGTTTGTGTACAGCGTCAAACATGTCAAACTTTGTTTCCAGTAGGCCA---- 948
consensus_8289#3      CT-GCTTTTGTTTGTGTACAGCGTNACCTGGGCCGATTC--------------------- 587
consensus_8289#1      CGCCGCCCGCCTCGTGAGCGAACGGAAAAACGTCAGGCGTCATTCTCACCGTCGTCGTCG 687
consensus_8289#2      AGATGTTTTCCCAAAAAAAGGAATCAGAAAGGAGAGGATAG------------------- 631
                                               *     *                            

consensus_8289#0      ----------------
consensus_8289#3      ----------------
consensus_8289#1      TCGTCGTCGCAGCGAG 703
consensus_8289#2      ----------------
                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)