cluster # 8292

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8292 cluster # 8292 Sequences # 9 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8292#0 length = 1267 sequences # 5
consensus_8292#1 length = 719 sequences # 1

consensus_8292#2 length = 678 sequences # 1
consensus_8292#3 length = 631 sequences # 1
consensus_8292#4 length = 463 sequences # 1

consensusID : consensus_8292#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1267
fasta sequence

                              [AAAACATTTCGTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAG-GGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATA-CCCGAAGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGT-GTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTGAAGAGCAAAGCACATTAAAAGTTACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAAAATCC]

[+] EMBL CNS092HT             [AAAACATTTCGTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAG GGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATA CCCGACGCTGGCTTCGGTGCCGCACAGCATTACCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTGCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAAGAGAAGAAGGT                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS09DX2             [                 TACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAA TCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAGAGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATA CCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTTCGAGGATGAGGATGAGGATATGGGCTTCGGTCT AAAAAAAAAATGCGACA CAAGACGACGA CCACGCCGcc                                                                                                                                                                                                                                                       ]
[-] EMBL CNS09DX3             [                                                                                                                                                                                                                                                                                                           CAACCAGAACCTGGAGAAGCTGTTAAACCACATAAAGGGCAACGTGGGCTTCGTGTTCACCAAG GGCGTTCTGGCCGAAATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATA CCCGAAGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACAACTGCTTCCGCTGCCGCCCCCGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGAACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTGAAGAGCAAAGCACATTAAAAGTTACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAA     ]
[-] EMBL CNS092HU             [                                                                                                                                                                                                                                                                                                                                  TCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAG GGCGGTCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCCAGGTGCGTGCCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTTTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATA CCCGAAGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGT GTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTGAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGAAACAATCC]
[-] EMBL CNS08GBZ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCGGATACCCCAAAAAAGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACAACTGCTTCCG TGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTTACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAA      ]




>consensus_8292#0
AAAACATTTCGTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCT
TTACGAAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCC
AACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGC
GCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCC
ATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAAC
AACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC
AAGGGCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCC
CAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACC
AAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGAC
AAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGCTGAACATCTCGCCGTTCTCGTAC
GGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGAC
ATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTG
TCGCTCCAGATCGGATACCCGAAGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTC
CGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCAAGGAGGCCGAAACGGTC
AAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAACGACTGCTTCCGCT
GCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCCGAGTCCGAGGATGAGGAT
GAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAGACGACGACCCACGCCGA
CCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGTTCCCTGAGCTATATCTA
CTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATG
GCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAA
CTGAAGAGCAAAGCACATTAAAAGTTACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGA
AAAATCC

consensusID : consensus_8292#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 719
fasta sequence

                              [CCGCCCACGCGTCCGCGAGCGATCGTCACAATCGTTCAGACAGCTGCGTGAGAACACTATCATACACGCGTTATTTATCCGAGCGATCGCTGCTAATTTGGTCAAAACCATCAACATGGTTGCTACAGAACACGCACACGATCAAGCTGGAAGGCTGGAAAATATCCCCCAGCAGCCGCTGCATCAGATCGACACGCCTTTTGAGAAGGCCACCTTCGGAATGGGGTGCTTTTGGGGATGTGACTCGCTCTTTGGCGCCACCAAGGGAGTTCTGCGGACACGTGTAGGCTATGCGGGAGGCTCTACCGAGTCGCCGGCCTATAAGAAGATGGGAGATCACACGGAAGTCATCGAAATTGATTATGATCCTCAAACGATCAGTTACAACGATCTGCTGGATTTGTTTTGGAACAACCACGAGTACGGTCTGACCACTCGCATGAAGCGCCAGTACATGTCGCTGATTTTGTATCATAACGAGCAACAACGGCAAATTGCGGAAGCGAGCCGGGCAGAGGAGCAGGTGAAGCGTGCTCCGGAGCAGATCATCACCGAAATTGCACCAGCCGGACCATTCTATCCTGCCGAAAAGTGAGTATCTCTTGCCGAACGCGAAAGATCGTTCAACTTTCAGGGTCGTACACTTTGAGGCGTGTGCCGCAAGTCGATCTCACAAGTTCACTGGTCACAGCTCAGTTTTCTATGGCGACGTCGCGACA]

[+] EMBL BM575695             [CCGCCCACGCGTCCGCGAGCGATCGTCACAATCGTTCAGACAGCTGCGTGAGAACACTATCATACACGCGTTATTTATCCGAGCGATCGCTGCTAATTTGGTCAAAACCATCAACATGGTTGCTACAGAACACGCACACGATCAAGCTGGAAGGCTGGAAAATATCCCCCAGCAGCCGCTGCATCAGATCGACACGCCTTTTGAGAAGGCCACCTTCGGAATGGGGTGCTTTTGGGGATGTGACTCGCTCTTTGGCGCCACCAAGGGAGTTCTGCGGACACGTGTAGGCTATGCGGGAGGCTCTACCGAGTCGCCGGCCTATAAGAAGATGGGAGATCACACGGAAGTCATCGAAATTGATTATGATCCTCAAACGATCAGTTACAACGATCTGCTGGATTTGTTTTGGAACAACCACGAGTACGGTCTGACCACTCGCATGAAGCGCCAGTACATGTCGCTGATTTTGTATCATAACGAGCAACAACGGCAAATTGCGGAAGCGAGCCGGGCAGAGGAGCAGGTGAAGCGTGCTCCGGAGCAGATCATCACCGAAATTGCACCAGCCGGACCATTCTATCCTGCCGAAAAGTGAGTATCTCTTGCCGAACGCGAAAGATCGTTCAACTTTCAGGGTCGTACACTTTGAGGCGTGTGCCGCAAGTCGATCTCACAAGTTCACTGGTCACAGCTCAGTTTTCTATGGCGACGTCGCGACA]




>consensus_8292#1
CCGCCCACGCGTCCGCGAGCGATCGTCACAATCGTTCAGACAGCTGCGTGAGAACACTAT
CATACACGCGTTATTTATCCGAGCGATCGCTGCTAATTTGGTCAAAACCATCAACATGGT
TGCTACAGAACACGCACACGATCAAGCTGGAAGGCTGGAAAATATCCCCCAGCAGCCGCT
GCATCAGATCGACACGCCTTTTGAGAAGGCCACCTTCGGAATGGGGTGCTTTTGGGGATG
TGACTCGCTCTTTGGCGCCACCAAGGGAGTTCTGCGGACACGTGTAGGCTATGCGGGAGG
CTCTACCGAGTCGCCGGCCTATAAGAAGATGGGAGATCACACGGAAGTCATCGAAATTGA
TTATGATCCTCAAACGATCAGTTACAACGATCTGCTGGATTTGTTTTGGAACAACCACGA
GTACGGTCTGACCACTCGCATGAAGCGCCAGTACATGTCGCTGATTTTGTATCATAACGA
GCAACAACGGCAAATTGCGGAAGCGAGCCGGGCAGAGGAGCAGGTGAAGCGTGCTCCGGA
GCAGATCATCACCGAAATTGCACCAGCCGGACCATTCTATCCTGCCGAAAAGTGAGTATC
TCTTGCCGAACGCGAAAGATCGTTCAACTTTCAGGGTCGTACACTTTGAGGCGTGTGCCG
CAAGTCGATCTCACAAGTTCACTGGTCACAGCTCAGTTTTCTATGGCGACGTCGCGACA

consensusID : consensus_8292#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [CCGCCCACGCGTCCGGCTCCACATGGTGGACGCTCACTGGTACCAGTTCCCGCCGATGAACCCGCTGTGGCACTCGATCCTGGGCTTTGCCATCTTTGTCCTTGGCGTCGTTTCCATCATCGGCAACGGTTGCGTTATCTACATCTTCACCAATACCAAGGCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCCTGATGATGTTTACCATGGCCCCTCCGATGGTGATCAACTGCTGGCACGAGACCTGGGTCTTTGGCCCGTTCGCCTGCGAGCTCTACGCCATGCTTGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACTATGATTGCCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGCATCTGGGCGTTCTCTCTGCTCTGGACGTTGGCTCCTCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCTTGCGGAACTGACTAATCTGTCGCAGGATTTCACCAGCCGATCATACATTCTGATCTACTCTGGCTTCGTGTACTACCTGCCTCTGTTCAGCATCATCTACTCGTACATCTACATCATCCAGGCTGTATCGGCCCACGAGAAGAACATGCGCGAGCAGG]

[+] EMBL BM577484             [CCGCCCACGCGTCCGGCTCCACATGGTGGACGCTCACTGGTACCAGTTCCCGCCGATGAACCCGCTGTGGCACTCGATCCTGGGCTTTGCCATCTTTGTCCTTGGCGTCGTTTCCATCATCGGCAACGGTTGCGTTATCTACATCTTCACCAATACCAAGGCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCCTGATGATGTTTACCATGGCCCCTCCGATGGTGATCAACTGCTGGCACGAGACCTGGGTCTTTGGCCCGTTCGCCTGCGAGCTCTACGCCATGCTTGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACTATGATTGCCTTTGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGCATCTGGGCGTTCTCTCTGCTCTGGACGTTGGCTCCTCTGTTCGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCTTGCGGAACTGACTAATCTGTCGCAGGATTTCACCAGCCGATCATACATTCTGATCTACTCTGGCTTCGTGTACTACCTGCCTCTGTTCAGCATCATCTACTCGTACATCTACATCATCCAGGCTGTATCGGCCCACGAGAAGAACATGCGCGAGCAGG]




>consensus_8292#2
CCGCCCACGCGTCCGGCTCCACATGGTGGACGCTCACTGGTACCAGTTCCCGCCGATGAA
CCCGCTGTGGCACTCGATCCTGGGCTTTGCCATCTTTGTCCTTGGCGTCGTTTCCATCAT
CGGCAACGGTTGCGTTATCTACATCTTCACCAATACCAAGGCACTCCGAACCCCCTCCAA
CTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCCTGATGATGTTTACCATGGCCCCTCC
GATGGTGATCAACTGCTGGCACGAGACCTGGGTCTTTGGCCCGTTCGCCTGCGAGCTCTA
CGCCATGCTTGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACTATGATTGCCTT
TGACCGTTACAACGTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGC
CCTGCTGCGCATTCTGGGCATCTGGGCGTTCTCTCTGCTCTGGACGTTGGCTCCTCTGTT
CGGATGGAACCGATACGTGCCGGAGGGCAACATGACCGCTTGCGGAACTGACTAATCTGT
CGCAGGATTTCACCAGCCGATCATACATTCTGATCTACTCTGGCTTCGTGTACTACCTGC
CTCTGTTCAGCATCATCTACTCGTACATCTACATCATCCAGGCTGTATCGGCCCACGAGA
AGAACATGCGCGAGCAGG

consensusID : consensus_8292#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 631
fasta sequence

                              [CCGCCCACGCGTCCGCGCAACGCATGAAGCAAGCAAAGATTATGGACTTTTTCCACATGTCGCCGCCGGAAAGAATTACACAACCGTCGTTGCACGCTAGCAGGGAACGGGCACGAAGGAAGTCCTGTCCGGCCGCGCAGGGAAATTTCTCCGGTACGCACATACCCAAACCGAACGGTTTCCCTAAACGTATGTCCTGCTCGATTGATAAGGTGAAGAAAGAGGTAGATGAATGTGAAGACGGCTCTCGCTTTGACGTACCCACGGACACACGTTTAGCAACCATCAACCAGGAGCAGGCCACACCCGACAAACAGAACATTAAGGTAGAATGTTCCGATGAAACGCCGGACGCAATGTTCTCGAGCTCACAGGTGGAAAATGGTACAGAAACGCCCAAGACAACCGCTTCTGTAAAGGTGGAAAATGGGACAGACACACCGGTCACACCCGTTGCTAGAGATAACTCCAACGGTTTGTTGAAAGTGATGTCTGCAGCGAAACCATCGCCCAAAACGTCAACACCCAAGACAACCGCTTCTATTAAGGTAGAAAATGGGACTGTCACACCCGCCACACCCGTATCTAGAGATAGCTCTAAGGGCTTGTTGAACGTGAAGTTAGCAGCGAA]

[+] EMBL BM621994             [CCGCCCACGCGTCCGCGCAACGCATGAAGCAAGCAAAGATTATGGACTTTTTCCACATGTCGCCGCCGGAAAGAATTACACAACCGTCGTTGCACGCTAGCAGGGAACGGGCACGAAGGAAGTCCTGTCCGGCCGCGCAGGGAAATTTCTCCGGTACGCACATACCCAAACCGAACGGTTTCCCTAAACGTATGTCCTGCTCGATTGATAAGGTGAAGAAAGAGGTAGATGAATGTGAAGACGGCTCTCGCTTTGACGTACCCACGGACACACGTTTAGCAACCATCAACCAGGAGCAGGCCACACCCGACAAACAGAACATTAAGGTAGAATGTTCCGATGAAACGCCGGACGCAATGTTCTCGAGCTCACAGGTGGAAAATGGTACAGAAACGCCCAAGACAACCGCTTCTGTAAAGGTGGAAAATGGGACAGACACACCGGTCACACCCGTTGCTAGAGATAACTCCAACGGTTTGTTGAAAGTGATGTCTGCAGCGAAACCATCGCCCAAAACGTCAACACCCAAGACAACCGCTTCTATTAAGGTAGAAAATGGGACTGTCACACCCGCCACACCCGTATCTAGAGATAGCTCTAAGGGCTTGTTGAACGTGAAGTTAGCAGCGAA]




>consensus_8292#3
CCGCCCACGCGTCCGCGCAACGCATGAAGCAAGCAAAGATTATGGACTTTTTCCACATGT
CGCCGCCGGAAAGAATTACACAACCGTCGTTGCACGCTAGCAGGGAACGGGCACGAAGGA
AGTCCTGTCCGGCCGCGCAGGGAAATTTCTCCGGTACGCACATACCCAAACCGAACGGTT
TCCCTAAACGTATGTCCTGCTCGATTGATAAGGTGAAGAAAGAGGTAGATGAATGTGAAG
ACGGCTCTCGCTTTGACGTACCCACGGACACACGTTTAGCAACCATCAACCAGGAGCAGG
CCACACCCGACAAACAGAACATTAAGGTAGAATGTTCCGATGAAACGCCGGACGCAATGT
TCTCGAGCTCACAGGTGGAAAATGGTACAGAAACGCCCAAGACAACCGCTTCTGTAAAGG
TGGAAAATGGGACAGACACACCGGTCACACCCGTTGCTAGAGATAACTCCAACGGTTTGT
TGAAAGTGATGTCTGCAGCGAAACCATCGCCCAAAACGTCAACACCCAAGACAACCGCTT
CTATTAAGGTAGAAAATGGGACTGTCACACCCGCCACACCCGTATCTAGAGATAGCTCTA
AGGGCTTGTTGAACGTGAAGTTAGCAGCGAA

consensusID : consensus_8292#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 463
fasta sequence

                              [TCCGCTCGAGGTCGTCATCCCCGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCAACAAGGTCGGGGCTTCCGAGGCCACGCTGCTCGACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAAATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGGGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCTTGTCGCTCCAGATCGGATACCCGAGGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGCGCAACAACTGCTTCCGCTG]

[-] EMBL CNS09R8V             [TCCGCTCGAGGTCGTCATCCCCGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCAACAAGGTCGGGGCTTCCGAGGCCACGCTGCTCGACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAAATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGGGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCTTGTCGCTCCAGATCGGATACCCGAGGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGCGCAACAACTGCTTCCGCTG]




>consensus_8292#4
TCCGCTCGAGGTCGTCATCCCCGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGA
TTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCAACAAGGTCGGGGCTTCCGAGG
CCACGCTGCTCGACATGCTGAACATCTCGCCGTTCTCGTACGGTCTGCAAATCCAGCAGG
TGTACGATTCGGGCTCGATCTTCTCGCCGGAAATCCTCGACATCAAGGCGGGGGATCTGC
GCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCTTGTCGCTCCAGATCGGATACC
CGAGGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTG
CCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATC
CGAGCAAGTTCGCCGCTGCCACGCGCAACAACTGCTTCCGCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8292#0      AAAACATTTCGTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCT 60
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      TTACGAAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCC 120
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      AACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGC 180
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      GCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCC 240
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      ATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGCGGGCATCTGGAGAAC 300
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ----------------------------------------CCGCCCACGCGTCCGGCTCC 20
consensus_8292#1      ----------------------------------------CCGCCCACGCGTCCGCGAGC 20
                                                                                  

consensus_8292#0      AACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC 360
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ---CCGCCCACGCGTCCGCGCAACGCATGAAGCAAGCAAAGATTATGGACTTTTTCCACA 57
consensus_8292#2      ACATGGTGGACGCTCACTGGTACCAGTTCCCGCCGATGAACCCGCTGTGGCACTCGATCC 80
consensus_8292#1      GATCGTCACAATCGTTCAGACAGCTGCGTGAGAACACTATCATACACGCGTTATTTATCC 80
                                                                                  

consensus_8292#0      AAGGGCGATCTGGCCGAGATCCGCGACAA--GCTGACCGAGAGCAAGGTGCGTGCCCCGG 418
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      TGTCGCCGCCGGAAAGAATTACACAACCGTCGTTGCACGCTAGCAGGGAACGGGCACGAA 117
consensus_8292#2      TGGGCTTTGCCATCTTTGTCCTTGGCGTCGTTTCCATCATCGGCAACGGTTGCGTTATCT 140
consensus_8292#1      GAGCGATCGCTGCTAATTTGGTCAAAACCATCAACATGGTTGCTACAGAACACGCACACG 140
                                                                                  

consensus_8292#0      CCC----AGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATC 474
consensus_8292#4      -----------------------TCCGCTCGAGG--TCGTCATCCCCGGCCCTGTCGATC 35
consensus_8292#3      -------GGAAGTCCTGTCCGGCCGCGCAGGGAAATTTCTCCGGTACGCACATACCCAAA 170
consensus_8292#2      ACA----TCTTCACCAATACCAAGGCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAAT 196
consensus_8292#1      ATCAAGCTGGAAGGCTGGAAAATATCCCCCAGCAGCCGCTGCATCAGATCGACACGCCTT 200
                                               *             *                    

consensus_8292#0      CCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCG 534
consensus_8292#4      CCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCG 95
consensus_8292#3      CCGAACGGTTTCCCTAAACGTATGTCCTGCTCGATTGATAAGGTGAAGAAAGAGGTAGAT 230
consensus_8292#2      CTGGCC---TTCTCCGATTTCCTGATGATGTTTACCATGGCCCCTCCGATGGTGATCAAC 253
consensus_8292#1      TTGAGAAGGCCACCTTCGGAATGGGGTGCTTTTGGGGATGTGACTCGCTCTTTGGCGCCA 260
                        *          *         *                             *      

consensus_8292#0      GGCGACAAGGTCGGCGCTTCCGAGGCCACGCTGCTCAACATGC--TGAACATCTCGCCGT 592
consensus_8292#4      GGCAACAAGGTCGGGGCTTCCGAGGCCACGCTGCTCGACATGC--TGAACATCTCGCCGT 153
consensus_8292#3      GAATGTGAAGACGGCTCTCGCTTTGACGTACCCACGGACACACGTTTAGCAAC-CATCAA 289
consensus_8292#2      TGCTGGCACGAGACCTGGGTCTTTGGCCCGTTCGCCTGCGAGCTCTACGCCATGCTTGGA 313
consensus_8292#1      CCAAGGGAGTTCTGCGGACACGTG--TAGGCTATGCGGGAGGC-TCTACCGAGTCGCCGG 317
                             *            *                     *      *    *     

consensus_8292#0      TCTCGTACGGTCTGCAGATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAA- 651
consensus_8292#4      TCTCGTACGGTCTGCAAATCCAGCAGGTGTACGATTCGGGCTCGATCTTCTCGCCGGAA- 212
consensus_8292#3      CCAGGAGCAGGC--CACACCCGACAAACAGAACATTAAGGTAGAATGTTCCGAT--GAA- 344
consensus_8292#2      TCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACTATGATTGCCTTTGACCGTTACAAC 373
consensus_8292#1      CCTATAAGAAGATGGGAGATCA-CACGGAAGTCATCGAAATTGATTATGATCCTCAAACG 376
                       *                     *         *           * *         *  

consensus_8292#0      ---ATCCTCGACATCAAGGCGGAGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAAC 708
consensus_8292#4      ---ATCCTCGACATCAAGGCGGGGGATCTGCGCGCCAAGTTCCAGGCTGGAGTCGCCAAC 269
consensus_8292#3      ---ACGCCGGACGCAATGTTCTCGAGCTCACAGGTGGAAAATGGTACAGAAACGCCCAA- 400
consensus_8292#2      GTCATCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATT 433
consensus_8292#1      ATCAGTTACAACGATCTGCTGGATTTGTTTTGGAACAACCACGAGTACGGTCTGACCACT 436
                         *      *                          *                  **  

consensus_8292#0      CTGGCTGCCGTG----TCGCTCCAGATCGGATACCCGAAGCTGGCTTCGGTGCCGAACAG 764
consensus_8292#4      CTGGCTGCCTTG----TCGCTCCAGATCGGATACCCGAGGCTGGCTTCGGTGCCGAACAG 325
consensus_8292#3      --GACAACCGCT----TCTGTAAAGGTGGAAAATGGGACAGACACACCGGTCACACCCGT 454
consensus_8292#2      CTGGGCATCTGGGCGTTCTCTCTGCTCTGGACGTTGGCTCCTCTGTTCGGATGGAACCGA 493
consensus_8292#1      C-GCATGAAGCG----CCAGTACATGTCGCTGATTTTGTA-TCATAACGAGCAACAACGG 490
                        *              *  *       *                  **        *  

consensus_8292#0      CAT-TGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGCTCA 823
consensus_8292#4      CAT-TGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCA 384
consensus_8292#3      TGC-TAGAGATAACTCCAACGGTTTGTTGAA-AGTGATGTCTGCAGCGAAACCATCGCCC 512
consensus_8292#2      TACGTGCCGGAGGGCAACATGACCGCTTG--CGGAACTGACTAATCTGTCGCAGGATTTC 551
consensus_8292#1      CAAATTGCGGAAGCGAGCCGGGCAGAGGAGCAGGTGAAGCGTGCTCCGGAGCAGATCATC 550
                          *                                 *        *            

consensus_8292#0      AGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACG- 882
consensus_8292#4      AGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGC 444
consensus_8292#3      AAAACGTCAACACCCAAGACAACCGCTTCTATTAAGGTAGAAAATGGGACTGTCACACCC 572
consensus_8292#2      ACCAGCCGATCATACATTCTGATCTACTCTGGCTTCGTGTACTACCTGCCTCTGTTCAGC 611
consensus_8292#1      ACCGAA--ATTGCACCAGCCGGACCATTCTATCCTGCCGAAAAGTGAGTATCTCTTGCCG 608
                      *                          **                  *    *       

consensus_8292#0      GCAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAATCC 942
consensus_8292#4      GCAACAACTGCTTCCGCTG----------------------------------------- 463
consensus_8292#3      GCCACACCCGTATCTAGAGATAGCTCTAAGGGCTTGTTGAACGTGAAGTTAGCAGCGAA- 631
consensus_8292#2      ATCATCTACTCGTACATCTACATCATCCAGGCTGTATCGGCCCACGAGAAGAACATGCGC 671
consensus_8292#1      AACGCGAAAGATCGTTCA---ACTTTCAGGGTCGTACACTTTGAGGCGTGTGCCGCAAGT 665
                                                                                  

consensus_8292#0      GAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAA 1002
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      GAGCAGG----------------------------------------------------- 678
consensus_8292#1      CGATCTCACAAGTTCACTGGTCACAGCTCAGTTTTCTATGGCGACGTCGCGACA------ 719
                                                                                  

consensus_8292#0      GACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTG 1062
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      TTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAG 1122
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      GCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGT 1182
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      ATTTTTCTGTGAAACCAACTGAAGAGCAAAGCACATTAAAAGTTACACAAAAGCCGGTGA 1242
consensus_8292#4      ------------------------------------------------------------
consensus_8292#3      ------------------------------------------------------------
consensus_8292#2      ------------------------------------------------------------
consensus_8292#1      ------------------------------------------------------------
                                                                                  

consensus_8292#0      GTCAGAATCGCAAGAGGAAAAATCC 1267
consensus_8292#4      -------------------------
consensus_8292#3      -------------------------
consensus_8292#2      -------------------------
consensus_8292#1      -------------------------