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Anopheles gambiae
cluster # 8335 cluster # 8335       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8335#0 length = 1683 sequences # 6  
consensus_8335#1 length = 655 sequences # 1  
consensus_8335#2 length = 641 sequences # 1  
consensus_8335#3 length = 493 sequences # 2  

consensusID : consensus_8335#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1683
fasta sequence
                              [CCGGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGCATTCGATCGTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGATCAGGCGGCGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGGAGAGTGTTGCAATATAACTAACAAAATAAGAAAAAAGCAACCAACGCGATTGATCGGAACTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACGGG-AAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACGGAT-AAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAACTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGACCCATCACCGCTTGGATCGTGCAAGAATACGAAAGTATACATGGCGGATGTCACTGCCCCGGCGATGATCGTGTACGATATGCCACGAGGCAAATCATGGCGCATAACGAACAAACAAATGCACCCCAACCCAGACCACGGTACCTTCACCATCTCCAACGAGAGCTTCGATCTGATGGACGGCATGGTGGCAATGGCATTGTCTCCGCGCATACCAACGGACAATGTGGTATTTCAATCAAACTACGGTACAAACTGGCGCCCGTCCAATGACCGATTGCTGTACTTCCATGCGCTGGCATCAGTGACAGAGAATGCAGTACGCACCTCCGTGCTGCACAATGACACCATTTGGGAGGAAGACGTCGAAGCAATGCCACGAGCCTTCCGCCCAATTGGCGTACGCCCGTCGCAGGCGGTAGCAGAGGCCATGGACAGCAATGGAAATTTATTCTTTGGATTGGTTGGGCAGAATGCGATCGCGTGCTGGGACTCGACGACGCCTTACAATCCGGCCAACATGCGTATCGTGTCACAAAACAGTGAAACATTACAGTTCCCTAGCGGAGTAAAGATCATACGGAACCGCAAGGGAGCCGAGGAGCTGTGGGTGTTAACTTGCCGTTTCC-AAAGGTTATGACGGGATCGTTGAACACAAACGAGACCAATTTCAGAATACAGGCCATACAGATTCCGGAGATTCTTGGATACAAAAGCTCGTGTAGAGTGTAAAGTTTTGGT---ATGTGTATGGGAGATTGAGGGAGAATGATTACAAATAAAACGTTACCATT]

[+] EMBL BM607513             [CCGGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGCATTCGATCGTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGATCAGGCGGCGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGGAGAGTGTTGCAATATAACTAACAAAATAAGAAAAAAGCAACCAACGCGATTGATCGGAACTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX625992             [              CAGCTGAATCGCAAGCGGAACGCGCAATTATTGCATTCGATCGTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGATCAGGCGGCGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGGAGAGTGTTGCAATATAACTAACAAAATAAGAAAAAAGCAACCAACGCGATTGATCGGAACTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACGGGAAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACGGAT AAATCATCCATCGCTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX618387             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACGGG AAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACGGATAAAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAACTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGACCCATCACCGCTTGGATCGTGCAAGAATACGAAAGTATACATGGCGGATGTCACTGCCCCGGCGATGATCGTGTACGATATGCCACGAGGCAAATCATGGCGCATAACGAACAAACAAATGCACCCCAACCCAGACCACGGTACCTTCACCATCTCCAACGAGAGCTTCGATCTGATGGACGGCATGGTGGCAATGGCATTGTCTCCGCGCATACCAACGGACAATGTGGTATTTCAATCAAACTACGGTACAAACTGGCGCCCGTCCAATGACCGATTGCTGTACTTCCATGCGCTGGCATCAGTGACAGAGAATGCAGTACGCACCTCCGTGCTGCACAATGACACCATTTGGGAGGAAGACGTC                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX618922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACGGG AAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACGGATAAAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAATTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGACCCATCACCGCTTGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX610367             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGCACCCCAACCCAGACCACGGTACCTTCACCATCTCCAACGAGAGCTTCGATCTGATGGACGGCATGGTGGCAATGGCATTGTCTCCGCGCATACCAACGGACAATGTGGTATTTCAATCAAACTACGGTACAAACTGGCGTCCGTCCAATGACCGATTGCTGTACTTCCATGCGCTGGCATCAGTGACAGAGAATGCAGTACGCACCTCCGTGCTGCACAATGACACCATTTGGGAGGAAGACGTCGAAGCAATGCCACGAGCCTTCCGCCCAATTGGCGTACGCCCGTCGCAGGCGGTAGCAGAGGCCATGGACAGCAATGGAAATTTATTCTTTGGATTGGTTGGGCAGAATGCGATCGCGTGCTGGGACTCGACGACGCCTTACAATCCGGCCAACATGCGTATCGTGTCACAAAACAGTGAAACATTACAGTTCCCTAGCGGAGTAAAGATCATACGGAACCGCAAGGGAGCCGAGGAGCTGTGGGTGTTAACTTGCCGTTTCC AAAGGTTATGACGGGATCGTTGAACACAAACGAGACCAATTTCAGAATACAGGCCATACAGATTCCGGAGATTCTTGGATACAAAAGCTCGTGTAGAGTGTAAAGTTTTGGT   ATGTGTATGGGAGATTGA                                ]
[+] EMBL BM643459             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCTGGCGCCCGTCCAATGACCGATTGCTGTACTTCCATGCGCTGGCATCAGTGACAGAGAATGCAGTACGCACCTCCGTGCTGCACAATGACACCATTTGGGAGGAAGACGTCGAAGCAATGCCACGAGCCTTCCGCCCAATTGGCGTACGCCCGTCGCAGGCGGTAGCAGAGGCCATGGACAGCAATGGAAATTTATTCTTTGGATTGGTTGGGCAGAATGCGATCGCGTGCTGGGACTCGACGACGCCTTACAATCCGGCCAACATGCGTATCGTGTCACAAAACAGTGAAACATTACAGTTCCCTAGCGGAGTAAAGATCATACGGAACCGCAAGGGAGCCGAGGAGCTGTGGGTGTTAACTTGCCGTTTCCAAAAGGTTATGACGGGATCGTTGAACACAAACGAGACCAATTTCAGAATACAGGCCATACAGATTCCGGAGATTCTTGGATACAAAAGCTCGTGTAGAGTGTAAAGTTTTGGTATGATGTGTATGGGAGATTGAGGGAGAATGATTACAAATAAAACGTTACCATT]


>consensus_8335#0 CCGGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGCATTCGATCGTCG TCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGATCAGGCGGCGGGT GATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGGAGAGTGTTGCAA TATAACTAACAAAATAAGAAAAAAGCAACCAACGCGATTGATCGGAACTGACCACACGAA CTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTAAGCGGCACA GAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTT GCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGAC TTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCA GAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTG TTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGC GTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGA CCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGT AACCGTATGTGGGTGCTCGACACGGGAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAG CTGGTAGTGATTGACATGAAGACGGATAAATCATCCATCGCTATCAAATACCGGCCGATC AGCTCGTGTGTGAACTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGACCCATCAC CGCTTGGATCGTGCAAGAATACGAAAGTATACATGGCGGATGTCACTGCCCCGGCGATGA TCGTGTACGATATGCCACGAGGCAAATCATGGCGCATAACGAACAAACAAATGCACCCCA ACCCAGACCACGGTACCTTCACCATCTCCAACGAGAGCTTCGATCTGATGGACGGCATGG TGGCAATGGCATTGTCTCCGCGCATACCAACGGACAATGTGGTATTTCAATCAAACTACG GTACAAACTGGCGCCCGTCCAATGACCGATTGCTGTACTTCCATGCGCTGGCATCAGTGA CAGAGAATGCAGTACGCACCTCCGTGCTGCACAATGACACCATTTGGGAGGAAGACGTCG AAGCAATGCCACGAGCCTTCCGCCCAATTGGCGTACGCCCGTCGCAGGCGGTAGCAGAGG CCATGGACAGCAATGGAAATTTATTCTTTGGATTGGTTGGGCAGAATGCGATCGCGTGCT GGGACTCGACGACGCCTTACAATCCGGCCAACATGCGTATCGTGTCACAAAACAGTGAAA CATTACAGTTCCCTAGCGGAGTAAAGATCATACGGAACCGCAAGGGAGCCGAGGAGCTGT GGGTGTTAACTTGCCGTTTCCAAAGGTTATGACGGGATCGTTGAACACAAACGAGACCAA TTTCAGAATACAGGCCATACAGATTCCGGAGATTCTTGGATACAAAAGCTCGTGTAGAGT GTAAAGTTTTGGTATGTGTATGGGAGATTGAGGGAGAATGATTACAAATAAAACGTTACC ATT



consensusID : consensus_8335#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 655
fasta sequence
                              [CCGCGAACGGATCGCGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGCATTCGATCTTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGATCAGGCGGTGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGGAGAGTGTTGCAATATAACGAACAAAATAACAAAAAAAGCAACCAACGCGATTGATCGGAACTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTGTCTAATCGATCTCTTCACAGTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCC]

[+] EMBL BM644511             [CCGCGAACGGATCGCGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGCATTCGATCTTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGATCAGGCGGTGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGGAGAGTGTTGCAATATAACGAACAAAATAACAAAAAAAGCAACCAACGCGATTGATCGGAACTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTGTCTAATCGATCTCTTCACAGTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCC]


>consensus_8335#1 CCGCGAACGGATCGCGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGC ATTCGATCTTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGAT CAGGCGGTGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGG AGAGTGTTGCAATATAACGAACAAAATAACAAAAAAAGCAACCAACGCGATTGATCGGAA CTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTG ATTGTCTAATCGATCTCTTCACAGTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAG CACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGC AGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGC GTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGG ATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAG AGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCC



consensusID : consensus_8335#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence
                              [CCGCCCACGCGTCCGCACCATCTTTGCACGTTCTCGTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACGGGAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACGGATAAAAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAACTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGA]

[+] EMBL BM581068             [CCGCCCACGCGTCCGCACCATCTTTGCACGTTCTCGTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACGGGAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACGGATAAAAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAACTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGA]


>consensus_8335#2 CCGCCCACGCGTCCGCACCATCTTTGCACGTTCTCGTAAGCGGCACAGAGATGGCAGCCC GATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAAT ACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTA CGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATAC CGCTCGACATGGATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTC CGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTT CTGGTCCGCTGATTGAGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACA ACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGG TGCTCGACACGGGAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTG ACATGAAGACGGATAAAAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGT GAACTGTCGCTGTTGGTAAACTTGCTTGTAGACGTACAGGA



consensusID : consensus_8335#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 493
fasta sequence
                              [ATCCCACGAGNGACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCCCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAGGATCGACG]

[+] EMBL BX466222             [ATCCCACGAGNGACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTGATTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATCCCGCCCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGCATTAGGATCGACG]
[+] EMBL BX628574             [                        TCGAATTGGCAAACAAGCACGNGTTTATGAGTGAATGTTGATTAANCGGCACNGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTACTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACANGAGCGTCAAGAGGCACTGGCATCAGGACGATACGTTCCANAGAACTGCNTACCGCTCGACATGG                                                                                                                                                                                                                   ]


>consensus_8335#3 ATCCCACGAGNGACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAAT GTTGATTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAGCACTGCAGTTGCTACTAG TTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGCAGCTTAAGGGTGTGCTTC AATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGCGTCAAGAGGCACTGGCAT CAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGGATGTAGATTATTCTAATC CCGCCCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAGAGGGCATCCCGTACACGC TTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGATTGAGGCCCTTTCCCAAC GCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGAATTGTGTCCGTGTTCCGC ATTAGGATCGACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      -------------CCGGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTG 47
consensus_8335#1      CCGCGAACGGATCGCGCACAGAACAACAGCTGAATCGCAAGCGGAACGCGCAATTATTGC 60
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      CATTCGATCGTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGA 107
consensus_8335#1      ATTCGATCTTCGTCGTCGATCGTTGGAAAGTGTGTCCTCTACTTTTGGAGATCGGTCGAT 120
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      TCAGGCGGCGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTG 167
consensus_8335#1      CAGGCGGTGGGTGATCGTTGTGGTGGATTTAGTTAAAGGTTACCGAGTGCTACTATCTGG 180
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      --------------------------------------------------------ATCC 4
consensus_8335#0      GAGAGTGTTGCAATATAACTAACAAAATAAGAAAAAAGCAACCAACGCGATTGATCGGAA 227
consensus_8335#1      AGAGTGTTGCAATATAACGAACAAAATAACAAAAAAAGCAACCAACGCGATTGATCGGAA 240
                                                                                  

consensus_8335#2      --------------------------CCGCCCACGCGTCCGCACC-ATCTTTGCACGTTC 33
consensus_8335#3      CACGAGNGACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTG 64
consensus_8335#0      CTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTG 287
consensus_8335#1      CTGACCACACGAACTCTGTTTCGAATTGGCAAACGAGCACGTGTTTATGAGTGAATGTTG 300
                                                  **  *** *  **     **   ** * *** 

consensus_8335#2      TCG---------------------TAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAG 72
consensus_8335#3      AT----------------------TAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAG 102
consensus_8335#0      AT----------------------TAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAG 325
consensus_8335#1      ATTGTCTAATCGATCTCTTCACAGTAAGCGGCACAGAGATGGCAGCCCGATCGCTATTAG 360
                                              ************************************

consensus_8335#2      CACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGC 132
consensus_8335#3      CACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGC 162
consensus_8335#0      CACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGC 385
consensus_8335#1      CACTGCAGTTGCTACTAGTTCTGCAGCTTCATCTTGCCTGGGGACAATACTTCGGCCAGC 420
                      ************************************************************

consensus_8335#2      AGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGC 192
consensus_8335#3      AGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGC 222
consensus_8335#0      AGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGC 445
consensus_8335#1      AGCTTAAGGGTGTGCTTCAATGGAAGGCAGCCGACTTTGCCTTTCCTACGCCACAGGAGC 480
                      ************************************************************

consensus_8335#2      GTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGG 252
consensus_8335#3      GTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGG 282
consensus_8335#0      GTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGG 505
consensus_8335#1      GTCAAGAGGCACTGGCATCAGGACGATACGTTCCAGAGAACTGCATACCGCTCGACATGG 540
                      ************************************************************

consensus_8335#2      ATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAG 312
consensus_8335#3      ATGTAGATTATTCTAATCCCGCCCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAG 342
consensus_8335#0      ATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAG 565
consensus_8335#1      ATGTAGATTATTCTAATCCCGCTCGATCGCGTTTGTTTGTGACCATTCCGCGATTTGTAG 600
                      ********************** *************************************

consensus_8335#2      AGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGA 372
consensus_8335#3      AGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGA 402
consensus_8335#0      AGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCCGCTGA 625
consensus_8335#1      AGGGCATCCCGTACACGCTTGGGCGTGTGAGCCGCGTTCAAGGTCCTTCTGGTCC----- 655
                      *******************************************************     

consensus_8335#2      TTGAG-CCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGA 431
consensus_8335#3      TTGAGGCCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGA 462
consensus_8335#0      TTGAG-CCCTTTCCCAACGCAGCAATACAGGCAAGACCTGAGACCAACAACTGCCAAGGA 684
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACG 491
consensus_8335#3      ATTGTGTCCGTGTTCCGCATTAGGATCGACG----------------------------- 493
consensus_8335#0      ATTGTGTCCGTGTTCCGCATTAAGATCGACGAATGTAACCGTATGTGGGTGCTCGACACG 744
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      GGAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACG 551
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      GGAAAGATTGGCGAAAAACGCATCTGTCTGCCGCAGCTGGTAGTGATTGACATGAAGACG 804
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      GATAAAAATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAACTGTCGCT 611
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      GATAA--ATCATCCATCGCTATCAAATACCGGCCGATCAGCTCGTGTGTGAACTGTCGCT 862
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      GTTGGTAAACTTGCTTGTAGACGTACAGGA------------------------------ 641
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      GTTGGTAAACTTGCTTGTAGACGTACAGGACCCATCACCGCTTGGATCGTGCAAGAATAC 922
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      GAAAGTATACATGGCGGATGTCACTGCCCCGGCGATGATCGTGTACGATATGCCACGAGG 982
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      CAAATCATGGCGCATAACGAACAAACAAATGCACCCCAACCCAGACCACGGTACCTTCAC 1042
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      CATCTCCAACGAGAGCTTCGATCTGATGGACGGCATGGTGGCAATGGCATTGTCTCCGCG 1102
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      CATACCAACGGACAATGTGGTATTTCAATCAAACTACGGTACAAACTGGCGCCCGTCCAA 1162
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      TGACCGATTGCTGTACTTCCATGCGCTGGCATCAGTGACAGAGAATGCAGTACGCACCTC 1222
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      CGTGCTGCACAATGACACCATTTGGGAGGAAGACGTCGAAGCAATGCCACGAGCCTTCCG 1282
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      CCCAATTGGCGTACGCCCGTCGCAGGCGGTAGCAGAGGCCATGGACAGCAATGGAAATTT 1342
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      ATTCTTTGGATTGGTTGGGCAGAATGCGATCGCGTGCTGGGACTCGACGACGCCTTACAA 1402
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      TCCGGCCAACATGCGTATCGTGTCACAAAACAGTGAAACATTACAGTTCCCTAGCGGAGT 1462
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      AAAGATCATACGGAACCGCAAGGGAGCCGAGGAGCTGTGGGTGTTAACTTGCCGTTTCCA 1522
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      AAGGTTATGACGGGATCGTTGAACACAAACGAGACCAATTTCAGAATACAGGCCATACAG 1582
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      ------------------------------------------------------------
consensus_8335#3      ------------------------------------------------------------
consensus_8335#0      ATTCCGGAGATTCTTGGATACAAAAGCTCGTGTAGAGTGTAAAGTTTTGGTATGTGTATG 1642
consensus_8335#1      ------------------------------------------------------------
                                                                                  

consensus_8335#2      -----------------------------------------
consensus_8335#3      -----------------------------------------
consensus_8335#0      GGAGATTGAGGGAGAATGATTACAAATAAAACGTTACCATT 1683
consensus_8335#1      -----------------------------------------
                                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)