cluster # 834

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 834 cluster # 834 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_834#0 length = 402 sequences # 1

consensus_834#1 length = 292 sequences # 1

consensusID : consensus_834#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [TGGCAATGCCGGCGAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCGATGGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGTGACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTGGACAGCACTGGAGGTAGGTTGGGTGGTGGGAGCCCCTGGGATCGTGGGAAGCTATTTTGTAATGGTCATGTTGCGCCTTTTAAGAGTGACTTACGCGAGCGCGCGCTCTCTTCGGTACTTCTCACGGCAAAGCGCAGCAGGAGCGTGCGTCCGATACAGGTTTCTGGTCTCGTGCGACCATTTATGGGTTCTCGTAAGGGGGGGGCCGTTGAAGTTTTCAGTGCAATGCAACACCA]

[+] EMBL AGA284055            [TGGCAATGCCGGCGAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCGATGGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGTGACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTGGACAGCACTGGAGGTAGGTTGGGTGGTGGGAGCCCCTGGGATCGTGGGAAGCTATTTTGTAATGGTCATGTTGCGCCTTTTAAGAGTGACTTACGCGAGCGCGCGCTCTCTTCGGTACTTCTCACGGCAAAGCGCAGCAGGAGCGTGCGTCCGATACAGGTTTCTGGTCTCGTGCGACCATTTATGGGTTCTCGTAAGGGGGGGGCCGTTGAAGTTTTCAGTGCAATGCAACACCA]




>consensus_834#0
TGGCAATGCCGGCGAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCGAT
GGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGT
GACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTGGACAGCACTGGAGG
TAGGTTGGGTGGTGGGAGCCCCTGGGATCGTGGGAAGCTATTTTGTAATGGTCATGTTGC
GCCTTTTAAGAGTGACTTACGCGAGCGCGCGCTCTCTTCGGTACTTCTCACGGCAAAGCG
CAGCAGGAGCGTGCGTCCGATACAGGTTTCTGGTCTCGTGCGACCATTTATGGGTTCTCG
TAAGGGGGGGGCCGTTGAAGTTTTCAGTGCAATGCAACACCA

consensusID : consensus_834#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 292
fasta sequence

                              [TGGCAATGCCGGCNAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCNATGGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGTGACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTTGGACAGCACTGGAGCAGGATCATCTGCGGTGGCATCTCCATCTGCTGCTACCGTCGGTGGCTCTACGGTGGCGGCAACCAGCAACAACAACGGCAGCTCTGCGAAGGATGCGGAGCAACGGCCCGG]

[+] EMBL AGA281325            [TGGCAATGCCGGCNAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCNATGGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGTGACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTTGGACAGCACTGGAGCAGGATCATCTGCGGTGGCATCTCCATCTGCTGCTACCGTCGGTGGCTCTACGGTGGCGGCAACCAGCAACAACAACGGCAGCTCTGCGAAGGATGCGGAGCAACGGCCCGG]




>consensus_834#1
TGGCAATGCCGGCNAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCNAT
GGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGT
GACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTTGGACAGCACTGGAG
CAGGATCATCTGCGGTGGCATCTCCATCTGCTGCTACCGTCGGTGGCTCTACGGTGGCGG
CAACCAGCAACAACAACGGCAGCTCTGCGAAGGATGCGGAGCAACGGCCCGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_834#0      TGGCAATGCCGGCGAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCGAT 60
consensus_834#1      TGGCAATGCCGGCNAGGTGGAGGAGAAGATACTCAACACAACGAACCAACCGGCGGCNAT 60
                     ************* ******************************************* **

consensus_834#0      GGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGT 120
consensus_834#1      GGTAACTGCAGTAGCAGCAGCAGCGAGCGGTGGCGAAAATGTGCCAGAATCGTCGACGGT 120
                     ************************************************************

consensus_834#0      GACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCT-GGACAGCACTGGAG 179
consensus_834#1      GACTTCACCCTCCCAATCGAATGATCAGATTTCAACCGAGCTGCTTGGACAGCACTGGAG 180
                     ********************************************* **************

consensus_834#0      GTAGGTTGGGTGGTGGGAGCCCCTGGGATCGTGGGAAGCTATTTTGTAATGGTCATGTTG 239
consensus_834#1      -CAGGATCATCTGCGGTGGCATCT----CCATCTGCTGCTACCGT-CGGTGGCTCTACGG 234
                       *** *     * **  **  **     * *  *  ****   *    ***   *   *

consensus_834#0      CGCCTTTTAAGAGTGACTTACGCGAGCGCGCGCTCTCTTCGGTACTTCTCACGGCAAAGC 299
consensus_834#1      TGGC----GGCAACCAGCAACAACAACGGCAGCTCTGCGAAGGATGCGGAGCAACGGCCC 290
                      * *       *   *   **   * **   *****     * *       *  *    *

consensus_834#0      GCAGCAGGAGCGTGCGTCCGATACAGGTTTCTGGTCTCGTGCGACCATTTATGGGTTCTC 359
consensus_834#1      GG---------------------------------------------------------- 292
                     *                                                           

consensus_834#0      GTAAGGGGGGGGCCGTTGAAGTTTTCAGTGCAATGCAACACCA 402
consensus_834#1      -------------------------------------------