These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8364#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1157 fasta sequence [CCGCCCACGCGTCCGAAACTCTCTTTCCGGCTAACGCCACTGTAAAACAGACGTGGTGAAACACCATGGCTGACGAAGCATTTGAAAACTTCGATGAGGAGGCGGCGGCACCGCA-GAGATGGACGATGCCGT-CAGGATGATCAGGCAGCGCAGGTCTACGAAGAGGCACCCGTAGACCATACTGCCGAGCTTCCCGAGATCAAGCTGTTCGGCCGATGGAGCAGTGATGATATCGATATTTCCGACATTTCCGTTTCGGATTATATCGCCGTGAAGGAGAAGCACGCCAAATACCTTCCCCACTCGGCCGGTCGCTATGCTGCCAAGCGTTTCCGCAAGGCCCAGTGCCCGATCGTCGAGCGTCTCAC-CAACTCGCTGATGGATCAGCCGCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGA-TC-ATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTG-CCCGGCT-CGCCAGCGT--GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC-CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCG-CTCGCCTCGGTCATCTGCGCCAACCTCGA-CCA-GGC-GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTAGTCGGGATGGATCTGTCCGCCTGGAGGGGTCA-CTAGCGGGGA-GGGGTGAATTGTTTTA-TGTACTGCTTTGTAGTATGGCA-GGGTGTATTTGTGTAGTTTCGTGTTTTAAATGAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAA-GATGT-GCTGCAGGGCACAACGTTA-TTAAAAGCAGAAAAAAAAAATNCAACAAAAGGCAGCATGTGC] [+] EMBL BM596668 [CCGCCCACGCGTCCGAAACTCTCTTTCCGGCTAACGCCACTGTAAAACAGACGTGGTGAAACACCATGGCTGACGAAGCATTTGAAAACTTCGATGAGGAGGCGGCGGCACCGCAGGAGATGGACGATGCCGTCCAGGATGATCAGGCAGCGCAGGTCTACGAAGAGGCACCCGTAGACCATACTGCCGAGCTTCCCGAGATCAAGCTGTTCGGCCGATGGAGCAGTGA ] [+] EMBL CNS08HQV [ ctggCTCTTTCCGGCTAACGCCACTGTAAAACAGACGTGTTGAAACACCATGGCTGACGAAGCATTTGAAAACTTCGATGAGGAGGCGGCGGCACCGCA GAGATGGACGATGCCGT CAGGATGATCAGGCAGCGCAGGTCTACGAAGAGGCACCCGTAGTCCAGACTGCCGAGCTTCCCGAGATCAAGCTGTTCGGCCGATGGAGCAGTGATGATATCGATATTTCCGACATTTCCGTTTCGGATTATATCGCCGTGAAGGAGAAGCACGCCAAATACCTTCCCCACTCGGCCGGTCGCTATGCTGCCAAGCGTTTCCGCAAGGCCCAGTGCCCGATCGTCGAGCGTCTCAC CAACTCGCTGATGGATCAGCCGCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGA TC ATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTG CCCGGCT CGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTAGTGGGGATGGATCTGTCCGCCTGGAGGGGTCA CTAGCGGGGA GGGGTGAATTGTTT ] [+] EMBL BM615304 [ ccgGCTCGTTTTTCGA CGACTTTCTCTTCTCGCTGATGGATCAGCCGCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGA TC ATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGGCTCACTAGCTTCGAGCAGTTCGGTCCAGTCGGTG CCCGGCT CGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCCGCGGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCGCCTCGCCTCGGTCATCTGCGCCAACCTCCA CCAGGGCGGGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAACGAGCATAACCCcg ] [+] EMBL BM614748 [ ccgCGCAGCAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGA TC ATGCGCTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTG CCCGGCT CGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCA ] [-] EMBL CNS08M9S [ CAGCAGCTGGACGATTCCATCACGTTCGGGTTGACGCGGTTGCTGTTTGCGGGCCGCAACCCGTTCGGTTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGA TC ACGC CTGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTG CCCGGCT CGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTCCTACACGAACGGGCC CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAG TGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTGGTCGGGATGGATCTGACCGCCTGGAGGGGTCA CTAGCCGGGT GGGGTGAATTGTTTTA TGTACTGCTTTGTAGTATGGCA GGGTGTATTTGTGTAGTTTCGTGTTTTAAATGAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAA GATGT GCgggctga ] [-] EMBL CNS09122 [ TTTGCTGGCCGCAACCCGTTCGGCTCGGATCTGGCGTCGCTCAACATACAGCGCGGCCGGGA TCAACGCG TGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTCACTAGCTTCGAGCAGTTCGGTCCGGTCGGTG CCCGGCT CGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAG TGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTGGTCGGGATGGATCTGACCGCCTGGAGGGGTCA CTAGCCGGGT GGGGTGAATTGTTTTA TGTACTGCTTTGTAGTATGGCA GGGTGTATTTGTGTAGTTTCGTGTTTTAAATGAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAAGGAAGTGGCTGCAGCGCACA ] [-] EMBL CNS09HAJ [ CAACATACAGCGCGGCCGGGATTC ACGCG TGCGCCCGTACAACGACTACCGGAGCTGGGCCGGCCTGGAGCGACTTACTAGCTTCGAGCAGTTCGGTCCGGTCGGTG CCCGGCT CGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAG TGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTGGTCGGGATGGATCTGACCGCCTGGAGGGGTCA CTAGCCGGGT GGGGTGAATTGTTTTA TGAACTGCTTTGTAGTATGGCA GGGTGTATTTGTGTAGTTTCGTGTTTTAAATGAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAA GATGT G TGCA GGCACAACGTTA TTA ] [-] EMBL CNS08HQW [ ACCGGAGCTGGGCCGGCTTGGAGCAATTAACTAGCTTCGAGCAGTTCGGTCCGGTCGGTGCCCCGGCTGCGCCAGCGT GTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC CCGGACCAATCCGGGCTTTTTTACCGGCGAGCAG TGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTAGTCGGGATGGATCTGTCCGCCTGGAGGGGTCA CTAGCGGGGA GGGGTGAATTGTTTTA TGAACTGCTTTGTAGTATGGCA GGGTGTATTTGTGTAGTTTCGTGTTTTAAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAA GATTT TCTGCA ] [+] EMBL BM577485 [ ccgcggacGCGTGGGTACGAGTTCCCGGACGATGTGGACCTGTGGGTGGGCGGACTGCTGGAGCCCCCGACGCAGGATGGGGCACTGTTTGGCGAAACGTTCGCCGCCATCATTAGCGAACAGTTCGCGCGGCTCAAGTTTGGCGACCGGTACTACTACACGAACGGGCC CCGGACCAATCCGGGCTTCTTTACCGGCGAGCAGCTGCGCGAACTGAGCAAGGTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGA CCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTAGTCGGGATGGATCTGTCCGCCTGGAGGGGTCA CTAGCGGGGAGGGGGTGAATTGTTTTA TGTACTGCTTTGTAGTATGGCAGGGGTGTATTTGTGTAGTTTCGTGTTTTAAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAA ] [-] EMBL BX466847 [ gnTGTCG CTCGCCTCGGTCATCTGCGCCAACCTCGATCCA GGC GGACGGGTTTTCCGCGCCCCGGGATGCGTTTAGACAGCCGAGCGAGCATAACCCGCCCGTCCCGTGCCAGACGCTAGTCGGGATGGATCTGTCCGCCTGGAGGGGTCACCTAGCGGGGA GGGGTGAATTGTTTTACTGTACTGCTTTGTAGTATGGCA GGGTGTATTTGTGTAGTTTCGTGTTTTAAATAAGTGTTTCTGGAAACACTATTTTGTAGTTTGTTGTGTTGTGTTCGAATAAAA GATGT GCTGCAGCGCACAACGTTAGTTAAAAGCAGAAAAAAAAAATNCAACAAAAGGCAGCATGTGC] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||