cluster # 8382

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Anopheles gambiae
cluster # 8382 cluster # 8382 Sequences # 10 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8382#0 length = 732 sequences # 7

consensus_8382#1 length = 679 sequences # 3

consensusID : consensus_8382#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 732
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTCCGGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGCCACAGTTACTGCTACTTCCAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG-TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAGACGATGATATCTACAAAGATCTGCATGCAAGTAC]

[+] EMBL BM651719             [CCGCGGACGCGTGGGCGGACGCGTGGGGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGCCACAGTTACTGCTACTTCCAACACAATGGTTGCCGAGATGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCGATGCCAATCACCTAGACTCGGATATTA                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM607581             [CCGCGGACGCGTGGGCGGACGCGT   GG   GGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGCCACAGTTACTGCTACTTCCAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACT                                         ]
[+] EMBL BM609703             [            ccgcccACGCGTCCGGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGCCACAGTTACTGCTACTTCCAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAGA                                 ]
[+] EMBL BM594048             [            ccgcccACGCGTCC      GGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAG                                  ]
[+] EMBL BM595110             [                        CCGGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGCCACAGTTACTGCTACTTCCAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAGA                                 ]
[+] EMBL BM579456             [                        CCGGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACTAG                                       ]
[+] EMBL BM577550             [                              ccGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCG TGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAGACGATGATATCTACAAAGATCTGCATGCAAGTAC]




>consensus_8382#0
CCGCGGACGCGTGGGCGGACGCGTCCGGGAATGGAACAATATCGCTCGCACTTCCATATC
ATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTT
TCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATC
AAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGC
CACAGTTACTGCTACTTCCAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTG
GCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATAT
TAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTT
CGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCT
TTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGA
AGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCT
AACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTT
CATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAGACGATGATATCTACAAAGATCT
GCATGCAAGTAC

consensusID : consensus_8382#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 679
fasta sequence

                              [ACCGGTGGAAACAAATAGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGA]

[+] EMBL BM589717             [ CCGGTGGAAACAAATAGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCATTCTGTACAGACAGAGAGGA]
[+] EMBL BM580400             [acaaGTGGAAACAAATAGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATA                                                                                                                                                                                                                                                         ]
[+] EMBL BM631296             [                    ccGGAACAATATCGCTCGCACTTCCATATCATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATATTAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAAAATATTAAACTGTTTC                                                                                                                                                                                       ]




>consensus_8382#1
ACCGGTGGAAACAAATAGGAATGGAACAATATCGCTCGCACTTCCATATCATTATGGATC
TATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTTTCGCGCACAA
TTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATCAAAGAATATC
TGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGCCACAGTTACT
GCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTGGCTCACGCGC
TGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATATTAAAGTCCTC
GCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTTCGATCCGTCG
TCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCTTTGCATACAA
AATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGAAGCGGATCTG
TTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCTAACTCTATCC
AAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTTCATAACTCAT
TCTGTACAGACAGAGAGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8382#0      CCGCGGACGCGTGGGCGGACGCGTCCGGGAATGGAACAATATCGCTCGCACTTCCATATC 60
consensus_8382#1      ----------ACCGGTGGAAACAAATAGGAATGGAACAATATCGCTCGCACTTCCATATC 50
                                   ** ***  *     *********************************

consensus_8382#0      ATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTT 120
consensus_8382#1      ATTATGGATCTATTTCGTTTACGTTTAAAGTAGTGCGTTGTTTACATTTTCTTCTGTTTT 110
                      ************************************************************

consensus_8382#0      TCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATC 180
consensus_8382#1      TCGCGCACAATTTCCTTCTTTCCCAATTGTCATCGTCTGAAGAAAGGCTCTGCTGATATC 170
                      ************************************************************

consensus_8382#0      AAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTAATGTGATGGC 240
consensus_8382#1      AAAGAATATCTGGGCGTGGGCGACAAAGTTATATTATATCTTTTTGTGTGATGTGATGGC 230
                      ************************************************* **********

consensus_8382#0      CACAGTTACTGCTACTTCCAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTG 300
consensus_8382#1      CACAGTTACTGCTACTTCTAACACGATGGTTGCCGAGTTGTGGCGTGAATGTGCCGCCTG 290
                      ****************** *****************************************

consensus_8382#0      GCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATAT 360
consensus_8382#1      GCTCACGCGCTGCAATATAATTCCAAATGACCACCGTGCCAATCACCTAGACTCGGATAT 350
                      ************************************************************

consensus_8382#0      TAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTT 420
consensus_8382#1      TAAAGTCCTCGCAACCATTCTCCGAGACGGAGTGCTGCTGTGTAATTTAGCAAATTTTTT 410
                      ************************************************************

consensus_8382#0      CGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCT 480
consensus_8382#1      CGATCCGTCGTCTTTCGATAGAAAAGATTTCAATCGTAAACCTCAAATGGCACACTTTCT 470
                      ************************************************************

consensus_8382#0      TTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGA 540
consensus_8382#1      TTGCATACAAAATATTAAACTGTTTCTAGAAGCATGCAAAACCAACTTTGGCTTGAAGGA 530
                      ************************************************************

consensus_8382#0      AGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCT 600
consensus_8382#1      AGCGGATCTGTTCGAACCGACCATGTTGTACGACCTTACCAACTTTCATCGGGTGCTTCT 590
                      ************************************************************

consensus_8382#0      AACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTT 660
consensus_8382#1      AACTCTATCCAAATTATCAACATGCAGAAAAGTGCAAACTGCAACTAATATACCTGGCTT 650
                      ************************************************************

consensus_8382#0      CATAACTCATTCTGTACAGACAGAGAGGACTAGTTTAGACGATGATATCTACAAAGATCT 720
consensus_8382#1      CATAACTCATTCTGTACAGACAGAGAGGA------------------------------- 679
                      *****************************                               

consensus_8382#0      GCATGCAAGTAC 732
consensus_8382#1      ------------