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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8384#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 808 fasta sequence
[CCGCGTGACCCGGAAAAGGTGAAACAGCAGGATGACGGGCGTCTTTGGACAGCTCACGCCCCCGGGCGTACCCGGCCA-ATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC-GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT-GGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTAC-GGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGAC-GGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCA-TTTGTTTGGGGTTTTTTTTGCGC--CGCGCAGTGTGTATGTGACTTGGCAGCTTGCATCAAAGCTTGCATCGCTTCGCTTGTACCCAAGCTACCGCCATCTGGCGGGAAGCACGGTGTACTTTACCCCTTTCTGCAGGGGTAACACACGGCTTTGTTTTTGCAATAAATATTCGAGT]
[+] EMBL BM627165 [CCGCGTGACCCGGAAAAGGTGAAACAGCAGGATGACGGGCGTCTTTGGACAGCTCACGCCCCCGGGCGTACCCGGCCA ATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT GGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTAC GGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGAC GGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCA TTTGTTTGGGGTTTTTTTTGCGC CGCGCAGTGTGTATGTGACTTGG ]
[+] EMBL BM583182 [CCGCGTGACCCGGAAAAGGTGAAACAGCAGGATGACGGGCGTCTTTGGACAGCTCACGCCCCCGGGCGTACCCGGCCA ATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT GGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTAC GGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGAC GGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCATTTTGTTTGGGGTTTTTTTTGCGC CGCGCAGT ]
[+] EMBL BX624986 [ GAAAAGGTGAAACAGCAGGATGACGGGCGTCTTTGGACAGCTCACGCCCCCGGGCGTACCCGGCCA ATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT GGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTAC GGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGAC GGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCA TTTGTTTGGGGTTTTTTTTGCGC CGCGCAGTGTGTATGTGACTTGGCAGCTTGCATCAAAGCTTGCATCGCTTCGCTTGTAC ]
[+] EMBL BX618138 [ GCGTCTTTGGACAGCTCACGCCCCCGGGCGTACCCGGCCA ATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT GGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTAC GGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGAC GGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCA TTTGTTTGGGGTTTTTTTTGCGC CGCGCAGTGTGTATGTGACTTGGCAGCTTGCATCAAAGCTTGCATCGCTTCGCTTGTACCCAAGCTACCGCCATCTGGCGGGAAGCACGGTGTACTTTACCCCTTTCTGCAGGGGTAACACACGGCTTTGTTTTTGCAATAAATATTCGAGT]
[+] EMBL CNS098O5 [ CCCGGGCGTACCCGGCCACATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCA CCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACTGGGGTGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTACGGGGGGCGAAACCTt ]
[+] EMBL BX618416 [ GGCCA ATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCACACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGAGCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGC ]
[+] EMBL BM618215 [ CACGGTGGACGTGCCGGCCATCAGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGATCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGACTCGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACCGCTCGGGCACGATCGTGCGCATCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT GGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTAC GGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGACGGGACGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCA TTTGTTTGGG TTTTTTTGCGCCGCGCGCAGTGTGTATGTGAGTTGGCAGCTTGCATCAAAGCTTGCATC ]
[-] EMBL CNS098O6 [ CGCACGGCCATCCGGAACCGG TGCGCGTGGAACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGGCCGCAGTACAACGAC GGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGTTTTCGCTCGGGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCAACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACT GGGTGTCGAGCGTG TGACGCTGCTGACCGGGCTGGCGTAC GGGGGCGAAACCTGGCTCCAG TGCGCGACCAGTACGAC GGCCGCACGGCCATCGGACAGTAGGGAGGAGCAACCCTTTCTGCCCGTACAGTCCA TTTGTTTGGG TTTTTTGCGCCGCGCGCAGTGTGTATGTGAGTTGGCAGCTTGCATCAAAGCTTGCA AACTTCGCTTGT ]
consensusID : consensus_8384#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 712 fasta sequence
[CTGTTGGCCTACTGGGTAGCGGTTCCACCGTGACCCGGAAAAG-GTGAAACAGCGGAACGGCAAAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGACCGCAGTACAACGACGGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGTTTTCGCTCGTGCTGCTGTGGGACCGGCACCGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCAACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACTGGGCGTCGAGCGTG-TGACGCTGCTGACCGCGCTGGCGTACGGGGGCGAAACCTGGCTCCAG-TGCGCGACCAGTACGACGGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCATTTGTTTGGGTTTTTTTGCGCCGCGCGCAGTGTGTATGTGAGTTGGCAGCTTGCATCAAAGCTTGCAAATCTTCGCTTGTACCCATGCTACCGCCATCTGGCGGGAAGCACGGTGTACTTTACCCCTTTCTGCAGGGGTAACACACGCTTTGTTTTGCAATAAATATTCGAGTTTTGAAATTAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGGTGGGT]
[-] EMBL CNS08KAV [CTGTTGGCCTACTGGGTAGCGGTTCCACCGTGACCCGGAAAAG GTGAAACAGCGGAACGGCAAAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGACCGCAGTACAACGACGGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGTTTTCGCTCGTGCTGCTGTGGGACCGGCACCGCTCGGGCACGATCGTGCGCAGCCAGCTGCCCCTGCTCAACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACTGGGCGTCGAGCGTG TGACGCTGCTGACCGCGCTGGCGTACGGGGGCGAAACCTGGCTCCAG TGCGCGACCAGTACGACGGCCGCACGGCCATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCATTTGTTTGGGTTTTTTTGCGCCGCGCGCAGTGTGTATGTGAGTTGGCAGCTTGCATCAAAGCTTGCAAATCTTCGCTTGTACCCAT ]
[+] EMBL CNS08KAU [ CGTGACCCGGAAAAGCGTG AACAGCGGAACGGCACAGTTGCTCCTGACGATCGGTGCGCTGGCCCTGATCCGACCGCAGTACAACGACGGCGTACAGTGGACGACCCTGTTCGCCCTCTGCCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACCGCTCGGGCACGATCGTGCGCA CCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGCCACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGGCTGGTACGTGTGCAACTGGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTACGGGGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGACGGCCGCACGG CATCGGACAGTAGGGAGGAGCAAACCGCTCTGCCCGTACAGTCCATTTGTTTGGGTTTTTTTGCGCCGCGCGCAGTGTGTATGTGAGTTGGCAGCTTGCATCAAAGCTTGCATCGCTTCGCTTGTACCCATGCTACCGCCATCTGGCGGGAAGCACGGTGTACTTTACCCCTTTCTGCAGGGGTAACACACGCTTTGTTTTGCAATAAATATTCGAGTTTTGAAATTAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGGTGGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8384#0 CCGCGTGACCCGGAAAAGGTGAAACAGCAGGATGACGGGCGTCTTTGGACAGCTCACGCC 60
consensus_8384#1 ------------------------------------------------------------
consensus_8384#0 CCCGGGCGTACCCGGCCAATGGGCGGACAAGGCCCCAGCGAAGGAGCCGCTGGACGCGCA 120
consensus_8384#1 ------------------------------------------------------------
consensus_8384#0 CACGGTGGACGTGCCGGCCATCGGCACAGCGGAACGGCAGGGCTGCCTGTGCACGCTGGA 180
consensus_8384#1 --------------------------CTGTTGGCCTACTGGGTAGCGGTTCCACCGTG-- 32
* * * * * *** ** * *** **
consensus_8384#0 GCGCACGGCCATCCGGAACCGGCTGCGCGTGGCACAGTTGCTCCTGACGATCGGTGCGCT 240
consensus_8384#1 --ACCCGGAAAAGGTGAAACAGCGGAACG--GCAAAGTTGCTCCTGACGATCGGTGCGCT 88
* *** * *** * ** * ** *** *************************
consensus_8384#0 GGCCCTGATCCGGCCGCAGTACAACGACGGCGTACAGTGGACGACCCTGTTCGCCCTCTG 300
consensus_8384#1 GGCCCTGATCCGACCGCAGTACAACGACGGCGTACAGTGGACGACCCTGTTCGCCCTCTG 148
************ ***********************************************
consensus_8384#0 CCACACGTTCGTGATTTCGCTCGTGCTGCTGTGGGACCGGCACTGCTCGGGCACGATCGT 360
consensus_8384#1 CCACACGTTCGTGTTTTCGCTCGTGCTGCTGTGGGACCGGCACCGCTCGGGCACGATCGT 208
************* ***************************** ****************
consensus_8384#0 GCGCAGCCAGCTGCCCCTGCTCGACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGC 420
consensus_8384#1 GCGCAGCCAGCTGCCCCTGCTCAACTGGCGCCGGCTGGAGCTGTGGTACACGGCGCTTGC 268
********************** *************************************
consensus_8384#0 CACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGG 480
consensus_8384#1 CACCGTCGCGCTGTACGGGCTCGCGTACGGCGTCCTGTTCGCGCACAAGGGCTACGGCGG 328
************************************************************
consensus_8384#0 CTGGTACGTGTGCAACTGGGCGTCGAGCGTGCTGACGCTGCTGACCGCGCTGGCGTACGG 540
consensus_8384#1 CTGGTACGTGTGCAACTGGGCGTCGAGCGTG-TGACGCTGCTGACCGCGCTGGCGTACGG 387
******************************* ****************************
consensus_8384#0 GGGCGAAACCTGGCTCCAGCTGCGCGACCAGTACGACGGCCGCACGGCCATCGGACAGTA 600
consensus_8384#1 GGGCGAAACCTGGCTCCAG-TGCGCGACCAGTACGACGGCCGCACGGCCATCGGACAGTA 446
******************* ****************************************
consensus_8384#0 GGGAGGAGCAAACCGCTCTGCCCGTACAGTCCATTTGTTTGGGGTTTTTTTTGCGCCGCG 660
consensus_8384#1 GGGAGGAGCAAACCGCTCTGCCCGTACAGTCCATTTGTTTGGGTTTTTTTGCGCCGCGCG 506
******************************************* ****** ** ****
consensus_8384#0 CAGTGTGTATGTGACTTGGCAGCTTGCATCAAAGCTTGCATCGCTTCGCTTGTACCCAAG 720
consensus_8384#1 CAGTGTGTATGTGAGTTGGCAGCTTGCATCAAAGCTTGCAAATCTTCGCTTGTACCCATG 566
************** ************************* *************** *
consensus_8384#0 CTACCGCCATCTGGCGGGAAGCACGGTGTACTTTACCCCTTTCTGCAGGGGTAACACACG 780
consensus_8384#1 CTACCGCCATCTGGCGGGAAGCACGGTGTACTTTACCCCTTTCTGCAGGGGTAACACACG 626
************************************************************
consensus_8384#0 GCTTTGTTTTTGCAATAAATATTCGAGT-------------------------------- 808
consensus_8384#1 -CTTTGTTTT-GCAATAAATATTCGAGTTTTGAAATTAAAAAAAAAAAAAAAAAAAAAAA 684
********* *****************
consensus_8384#0 ----------------------------
consensus_8384#1 AAGGCCACATGTGCCCGAGCTGGTGGGT 712
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||