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Anopheles gambiae
cluster # 8391 cluster # 8391       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8391#0 length = 1247 sequences # 2  
consensus_8391#1 length = 778 sequences # 6  
consensus_8391#2 length = 493 sequences # 1  
consensus_8391#3 length = 363 sequences # 1  

consensusID : consensus_8391#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1247
fasta sequence
                              [CTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTCACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCCCTCGATGGCGCCGTTCGAGCATCCGTACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGAGCGATTGTAGAGTTTTTGAAGCGGTTCAAGATCAATCCCGTTACTGGCAGCCCGCTGGTCGGAGGGCTGGAAGTGCTGACCGAGATGGAACGCGTGGAAGTGGACAATCGAAAACGTAAAAAAAAGAACATCTTCATCCAGCGGGCGCAAGTGTTTGTCGATCCGTTCCAGGAGGTGGACGAACACGAACGGATCGCAATTCTTCATTACCTATCGATCGTGCAAACATCTGGACGGAAAGCACACAATATTCGGCACTGCCAAAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGGCGGTGATCCTACCGGGGTCGGGAATGGAGGCACGTCCGCGTGGGGCAAAAAGTTTGCGGACGAAATCAAACCAAACCTATCGCACGCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGTGTCCTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTGAAAACAATCTCCGCCGAAACGAAGGACATTCTGACGCAGCTGGAAAAGGACTACAAAGCACCGTTTTTTTTTTTTTTTAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGCTCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGTGTCGAACCACGAGGCAGCAATAATCGACGATGACATTGTACGCTACGAGCGGGTCAAGAAGAAGGGCTACGTGCGGCTGCTGACCAACTTTGGCGCCCTAAACCTCGAGCTGTACTGTGAGCAGGTGCCGAAGACGTGCGAAAACTTCCTGAAGAACTGCCAAAGCGGCTACTACAACGAGTGGCACGGCCAACGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGTTGATGGTTTCGGTAATTTTAGCTCGTGGTGATTTTAGAACAAATAAATTTGGGTCATT]

[+] EMBL CNS094IZ             [CTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTCACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCCCTCGATGGCGCCGTTCGAGCATCCGTACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGAGCGATTGTAGAGTTTTTGAAGCGGTTCAAGATCAATCCCGTTACTGGCAGCCCGCTGGTCGGAGGGCTGGAAGTGCTGACCGAGATGGAACGCGTGGAAGTGGACAATCGAAAACGTAAAAAAAAGAACATCTTCATCCAGCGGGCGCAAGTGTTTGTCGATCCGTTCCAGGAGGTGGACGAACACGAACGGATCGCAATTCTTCATTACCTATCGATCGTGCAAACATCTGGACGGAAAGCACACAATATTCGGCACTGCCAAAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGGCGGTGATCCTACCGGGGTCGGGAATGGAGGCACGTCCGCGTGGGGCAAAAAGTTTGCGGACGAAATCAAACCAAACCTATCGCACGCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGTGTCCTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTGAAAACAATCTCCGCCGAAACGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS094J0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gaACTGCCAAAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGGCGGTGATCCTACCGGGGTCGGGAATGAAGGCACGTCCGCGTGGGGCAAAAAGTTTGCGGACGAAATCAAACCAAACCTATCGCACGCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGTGTCCTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTGAAAACAATCTCCGCCGAAACGAAGGACATTCTGACGCAGCTGGAAAAGGACTACAAAGCACCGTTTTTTTTTTTTTTTAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGCTCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGTGTCGAACCACGAGGCAGCAATAATCGACGATGACATTGTACGCTACGAGCGGGTCAAGAAGAAGGGCTACGTGCGGCTGCTGACCAACTTTGGCGCCCTAAACCTCGAGCTGTACTGTGAGCAGGTGCCGAAGACGTGCGAAAACTTCCTGAAGAACTGCCAAAGCGGCTACTACAACGAGTGGCACGGCCAACGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGTTGATGGTTTCGGTAATTTTAGCTCGTGGTGATTTTAGAACAAATAAATTTGGGTCATT]


>consensus_8391#0 CTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTCACGTA CACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGAT CAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCCCTCGATGGCGCCGTTCGAGCATCC GTACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGAGCGATTGTAGAGTTTTTGAAGC GGTTCAAGATCAATCCCGTTACTGGCAGCCCGCTGGTCGGAGGGCTGGAAGTGCTGACCG AGATGGAACGCGTGGAAGTGGACAATCGAAAACGTAAAAAAAAGAACATCTTCATCCAGC GGGCGCAAGTGTTTGTCGATCCGTTCCAGGAGGTGGACGAACACGAACGGATCGCAATTC TTCATTACCTATCGATCGTGCAAACATCTGGACGGAAAGCACACAATATTCGGCACTGCC AAAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGG GCGGTGATCCTACCGGGGTCGGGAATGGAGGCACGTCCGCGTGGGGCAAAAAGTTTGCGG ACGAAATCAAACCAAACCTATCGCACGCTGGTGGACGATACGCCGTTTCTGCGCAAGGAT CTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCAC ATCAAGAAGAACCTGCGTGTCCTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAG GGCCGGCTGAAAACAATCTCCGCCGAAACGAAGGACATTCTGACGCAGCTGGAAAAGGAC TACAAAGCACCGTTTTTTTTTTTTTTTAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGC TCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGTGTC GAACCACGAGGCAGCAATAATCGACGATGACATTGTACGCTACGAGCGGGTCAAGAAGAA GGGCTACGTGCGGCTGCTGACCAACTTTGGCGCCCTAAACCTCGAGCTGTACTGTGAGCA GGTGCCGAAGACGTGCGAAAACTTCCTGAAGAACTGCCAAAGCGGCTACTACAACGAGTG GCACGGCCAACGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGTTGATGGTTTCG GTAATTTTAGCTCGTGGTGATTTTAGAACAAATAAATTTGGGTCATT



consensusID : consensus_8391#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 778
fasta sequence
                              [CCGCCCACGCGTCCGGGAAGTAAAAGCAGAAGCAGCGGATTGTAAACAAAGCATCCTCACAGGGGAATTGCAATTTTGTCGC-AACTTCCACCCTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGGCGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGAAAGACGGGCAACGTGTTTTCGTGGGAAGCGATCGAGCAGCTCAACGTGAAGGCCAAGAACTGGAAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAAGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGCGTCCTCACGG-AGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTGAAACCAATCTCCGCCGAAACGAAGGACATTCTCACGCAGCTCGAAAAGGACTACAAAGCACCGGAAGAGC]

[+] EMBL BM581427             [CCGCCCACGCGTCCGGGAAGTAAAAGCAGAAGCAGCGGATTGTAAACAAAGCATCCTCAAAGGGGAATTGCAATTTTGTCGC AACTTCCACCCTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGGCGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGAAAGACGGGCAACGTGTTTTCGTGGGAAGCGATCGAGCAGCTCAACGTGAAGGCCAAGAACTGGAAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAAGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGCGTCCTCACGGAAGGAAG                                                                                                         ]
[+] EMBL CNS08Z6Z             [                                      ATTGTAAACAAAGCATCCTCAAAGGGGAATCGCAATTTCGTCGCTACCTTGCACCCTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTCACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGATCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAAAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCG                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM597777             [                                                           ccGGGGAATTGCAATTTTGTCGC AACTTCCACCCTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGGCGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGAAAGACGGGCAACGTGTTTTCGTGGGAAGCGATCGAGCAGCTCAACGTGAAGGCCAAGAACTGGAAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAAGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGCGTCCTCACGG AGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTGAAAC                                                                  ]
[+] EMBL BM589386             [                                                          ccgGGGGAATCGCAATTTCGTCGC AACTTCCACCCTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAATTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGTAAGACGGGCAACGTGTTCTCCTGGGAAGCGATCGAACAGCTCAACGTTAAGGCCAAGAACTGGAAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGCGTCCTCACGG AGGAAGAGCTGGCCGAGCG                                                                                            ]
[+] EMBL BM597063             [                                                          ccgGGGGAATTGCAATTTTGTCGC AACTTCCACCCTAAAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGGCGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGAAAGACGGGCAACGTGTTTTCGTGGGAAGCGATCGAGCAGCTCAACGTGAAGGCCAAGAACTGGAAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAAGATCCGGGCAATCTGGACAAGTTCAACA                                                                                                                                                             ]
[+] EMBL BM606095             [                                                                                              ccgAAACGCTTCAAAATGGGTAAAAAACAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGCCACAAACCAGACTCGGTGGAGAATGAGCAGATCAAATTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTACCACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGTAAGACGGGCAACGTGTTCTCCTGGGAAGCGATCGAACAGCTCAACGTTAAGGCCAAGAACTGGAAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGCGTCCTCACGG AGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTAAAAACAATCTCCGCCGAAACGAAGGACATTCTCACGCAGCTCGAAAAGGACTACAAAGCACCGGAAGAGC]


>consensus_8391#1 CCGCCCACGCGTCCGGGAAGTAAAAGCAGAAGCAGCGGATTGTAAACAAAGCATCCTCAC AGGGGAATTGCAATTTTGTCGCAACTTCCACCCTAAAAACGCTTCAAAATGGGTAAAAAA CAGCATCAGAAGGATAAAATGTACCTGACGTACACCGAGTGGTCCGAGTTTTACGGCGGC CACAAACCAGACTCGGTGGAGAATGAGCAGATCAAGTTTAAGCGACTGCCGTTCGACCAC TGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGTACTGCGACAAAGGCGGGAACGTGTTT GAGCTGGCGGCGATTGTAGAGTTTTTGAAGCGGTTCAAGGTCAATCCCGTTACTGGCAGC CCGCTGGATGGCAAATCGCTGATCAAGCTAAACTTTACCAAGAACCACGAGGGACAGTAC CACTGCCCGACGCTGTTTAAACCGTTCACCAAAAACTCCCACATCGTGGCGAACGGAAAG ACGGGCAACGTGTTTTCGTGGGAAGCGATCGAGCAGCTCAACGTGAAGGCCAAGAACTGG AAGGATCTGGTGGACGATACGCCGTTTCTGCGCAAGGATCTGATCACCATCCAAGATCCG GGCAATCTGGACAAGTTCAACATAACCACCTTCCACCACATCAAGAAGAACCTGCGCGTC CTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAGGGCCGGCTGAAACCAATCTCC GCCGAAACGAAGGACATTCTCACGCAGCTCGAAAAGGACTACAAAGCACCGGAAGAGC



consensusID : consensus_8391#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 493
fasta sequence
                              [CGGAACACGAACGGATCGCAATTCTTCATTACCTATCGATCGTGCAAACATCTGGACGGAAAGCACACAATATTCGGCAAGCTGGTCGGAGGGCTGGAAGTGCTGACCGAGATGGAACGCGTGGAAGTGGACAATCGAGACCGTCCCATCGAGAACATCTTCATCCAGCGGGCGCAAGTGTTTGTCGATCCGTTCCAGGAGGTGGACGAACAGCTTGCCAAGGAGCGGGCGGAAGAGCTGGAGCGCATACAGCGGGAGGCGGAAGCGAAGCGTGACAAAACGGCAGGCAAAAAGTCCTCCCAACCGTTGAAGGTGTTCCGGTCCGGTGTGGGCAAGTATCTCGATACGAGCGTGACCAAAGTGCTGCCGGCACAGGCGTCAGGGGAAACTCCCGGCACGAGTGGCACGACCAACGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGGTGATGGTTTCGGTAATTTTAGCTCGTGGTGATTTTAGAACA]

[-] EMBL CNS08Z70             [CGGAACACGAACGGATCGCAATTCTTCATTACCTATCGATCGTGCAAACATCTGGACGGAAAGCACACAATATTCGGCAAGCTGGTCGGAGGGCTGGAAGTGCTGACCGAGATGGAACGCGTGGAAGTGGACAATCGAGACCGTCCCATCGAGAACATCTTCATCCAGCGGGCGCAAGTGTTTGTCGATCCGTTCCAGGAGGTGGACGAACAGCTTGCCAAGGAGCGGGCGGAAGAGCTGGAGCGCATACAGCGGGAGGCGGAAGCGAAGCGTGACAAAACGGCAGGCAAAAAGTCCTCCCAACCGTTGAAGGTGTTCCGGTCCGGTGTGGGCAAGTATCTCGATACGAGCGTGACCAAAGTGCTGCCGGCACAGGCGTCAGGGGAAACTCCCGGCACGAGTGGCACGACCAACGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGGTGATGGTTTCGGTAATTTTAGCTCGTGGTGATTTTAGAACA]


>consensus_8391#2 CGGAACACGAACGGATCGCAATTCTTCATTACCTATCGATCGTGCAAACATCTGGACGGA AAGCACACAATATTCGGCAAGCTGGTCGGAGGGCTGGAAGTGCTGACCGAGATGGAACGC GTGGAAGTGGACAATCGAGACCGTCCCATCGAGAACATCTTCATCCAGCGGGCGCAAGTG TTTGTCGATCCGTTCCAGGAGGTGGACGAACAGCTTGCCAAGGAGCGGGCGGAAGAGCTG GAGCGCATACAGCGGGAGGCGGAAGCGAAGCGTGACAAAACGGCAGGCAAAAAGTCCTCC CAACCGTTGAAGGTGTTCCGGTCCGGTGTGGGCAAGTATCTCGATACGAGCGTGACCAAA GTGCTGCCGGCACAGGCGTCAGGGGAAACTCCCGGCACGAGTGGCACGACCAACGATGCA TTGAAAGCGAAGAAACGTAAAGTAGCAAGTGGTGATGGTTTCGGTAATTTTAGCTCGTGG TGATTTTAGAACA



consensusID : consensus_8391#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 363
fasta sequence
                              [CCGCTACAAAGCACCGGAAGAGCAGCAGGAAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGCTCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGTGTCGAACCATGAGGCAGCAATAATCGATGACGACATCGTGCGGTACGAGCGGGTCAAGAAGAAGGGCTACGTCCGGCTGCTGACCAACTTTGGTGCCCTAAACCTCGAACTGTACTGTGAGCAGGTGCCGAAGACGTGCGAAAACTTCCTGAAGCACTGCCAAAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGGCGGTGATCCTACCGGGGTCGG]

[+] EMBL BM625910             [CCGCTACAAAGCACCGGAAGAGCAGCAGGAAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGCTCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGTGTCGAACCATGAGGCAGCAATAATCGATGACGACATCGTGCGGTACGAGCGGGTCAAGAAGAAGGGCTACGTCCGGCTGCTGACCAACTTTGGTGCCCTAAACCTCGAACTGTACTGTGAGCAGGTGCCGAAGACGTGCGAAAACTTCCTGAAGCACTGCCAAAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGGCGGTGATCCTACCGGGGTCGG]


>consensus_8391#3 CCGCTACAAAGCACCGGAAGAGCAGCAGGAAGAGCGGCAGGTTGCGGACAAGTTCAATGC AGCTCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGT GTCGAACCATGAGGCAGCAATAATCGATGACGACATCGTGCGGTACGAGCGGGTCAAGAA GAAGGGCTACGTCCGGCTGCTGACCAACTTTGGTGCCCTAAACCTCGAACTGTACTGTGA GCAGGTGCCGAAGACGTGCGAAAACTTCCTGAAGCACTGCCAAAGCGGCTACTACAACGG GTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGGCGGTGATCCTACCGGGGT CGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8391#0      ------------------------------------------------------------
consensus_8391#1      -------------CCGCCCACGCGTCCGGGAAGTAAAAGCAGAAGCAGCGGATTGTAAAC 47
consensus_8391#3      ---------------------------------------CCGCTACAAAGCACCGGAAGA 21
consensus_8391#2      CGGAACACGAACGGATCGCAATTCTTCATTACCTATCGATCG-TGCAAACATCTGGACGG 59
                                                                                  

consensus_8391#0      ------------------------------------------------CTAAA---AACG 9
consensus_8391#1      AAAGCATCCT---CACAGGGGAATTGCAATTTTGTCGCAACTTCCACCCTAAA---AACG 101
consensus_8391#3      GCAGCA----------GGAAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGCT---CACT 68
consensus_8391#2      AAAGCACACAATATTCGGCAAGCTGGTCGGAGGGCTGGAAGTGCTGACCGAGATGGAACG 119
                                                                      *        ** 

consensus_8391#0      CTTCAAAATGGGTAAA--AAACAGCATCAGAAGGATAAAATGTACCTCACGTACACC-GA 66
consensus_8391#1      CTTCAAAATGGGTAAA--AAACAGCATCAGAAGGATAAAATGTACCTGACGTACACC-GA 158
consensus_8391#3      ACTCAACCGGGGCGGT--GG-CGGCTTCCTTTACCTCCACTGC----GATG-GTGCC-G- 118
consensus_8391#2      CGTGGAAGTGGACAATCGAGACCGTCCCATCGAGAACATCTTCATCCAGCGGGCGCAAGT 179
                        *  *   **          * *   *            *         *    *  * 

consensus_8391#0      GTGGTCCGAGTTTTACGGCGGCCACAAACCA----GACTCGGTGGAGAATGAGCAGATCA 122
consensus_8391#1      GTGGTCCGAGTTTTACGGCGGCCACAAACCA----GACTCGGTGGAGAATGAGCAGATCA 214
consensus_8391#3      GTG--TCGAACCATGAGGCAGCAATAATCGATGACGACATCGTGCGGTACGAGCGGGTCA 176
consensus_8391#2      GTTTGTCGATCCGTTCCA-GGAGGTGGACGA--ACAGCTTGCCAAGGAGCGGGCGGAA-G 235
                      **    ***    *      *       * *      *        *   * ** *    

consensus_8391#0      AGTTTAAGCGACTGCCGTTCGACCACTGCTGCCCCTCGATGGCGCCGTTCGAGCATCCGT 182
consensus_8391#1      AGTTTAAGCGACTGCCGTTCGACCACTGCTGCCTCTCGATGGTGCCGTTCGAGCATCCGT 274
consensus_8391#3      AGAAGAAG-GGCTAC-GTCCGGC---TGCTGACCAACTTTGGTGCCCT---AAACCTCGA 228
consensus_8391#2      AGCTGGAGCGCATACAG--CGGGAGGCGGAAGCGAAGCGTGACAAAACGGCAGGCAAAAA 293
                      **    ** *  * * *  **      *    *      **          *        

consensus_8391#0      ACTGCGACAAAGACGGGAACGTGTTTGAGCTGGCGAGCGATTGTAGAGTTTTTGAAGCGG 242
consensus_8391#1      ACTGCGACAAAGGCGGGAACGTGTTTGAGCTGGCG-GCGATTGTAGAGTTTTTGAAGCGG 333
consensus_8391#3      ACTGTACT----GTGAGCAGGTGCCGAAG---ACGTGCGA----AAACTTCCTGAAGCAC 277
consensus_8391#2      GTCCTCCCAACCGTTGAAGGTGTTCCGGTCCGGTGTGGGCAAGTATCTCGATACGAGCGT 353
                                                        * * *     *          ***  

consensus_8391#0      TTCAAGATCAATCCCGTTACTGGCAGCCCGCTGGTCGGAGGGCTGGAAGTGCTGACCGAG 302
consensus_8391#1      TTCAAGGTCAATCCCGTTACTGGCAGCCCGCTGGATGGCA------AATCGCTGATCAAG 387
consensus_8391#3      TGCCAAAGCGGCTACTACAACGGGTGTCTGTT----------------TCACCGGTCGAT 321
consensus_8391#2      GACCAAAGTGCTGCCGGCACAGGCGTCAGGGGAAACTCCCGGCACGAGTGGCACGACCAA 413
                        * *         *   *  **      *                     *    * * 

consensus_8391#0      ATG-GAACGCGTGGAAGTGGACAATCGAAAACGTAAAAAAAAGAACATCTTCATCCAGCG 361
consensus_8391#1      CTA-AACTTT-------------ACCAAGAAC-CACGAGGGACAGTACCACTGCCCGACG 432
consensus_8391#3      CCGCAACTTTATG----------ATCCAGGGC-----GGTGATCCTACCGGGGTCGG--- 363
consensus_8391#2      CGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGGTGATGGTTTCGGTAATTTTAG 473
                                                 *             *      *           

consensus_8391#0      GGCGCAAGTGTTTGTCGATCCGTTCCAGGAGGTGGACGAACACGAACGGATCGCAATTCT 421
consensus_8391#1      -------CTGTTT---AAACCGTTC------------------------ACCAAAAACTC 458
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      CTCGTGGTGATTTTAGAACA---------------------------------------- 493
                                                                                  

consensus_8391#0      TCATTACCTATCGATCGTGCAAACATCTGGACGGAAAGCACACAATATTCGGCACTGCCA 481
consensus_8391#1      CCAC---------ATCGTGG-------CGAACGGAAAG---------------------- 480
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      AAGCGGCTACTACAACGGGTGTCTGTTTCACCGGTCGATCCGCAACTTTATGATCCAGGG 541
consensus_8391#1      --ACGG-----GCAACGTGTTTTCGT-------------------------------GGG 502
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      CGGTGATCCTACCGGGGTCGGGAATGGAGGCACGTCCGCGTGG-GGCAAAAAGTTTGCGG 600
consensus_8391#1      AAGCGATC-------------------GAGCAGCTCAACGTGAAGGCCAAGAACT---GG 540
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      ACGAAATCAAACCAAACCTATCGCACGCTGGTGGACGATACGCCGTTTCTGCGCAAGGAT 660
consensus_8391#1      AAGGAT---------------------CTGGTGGACGATACGCCGTTTCTGCGCAAGGAT 579
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      CTGATCACCATCCAGGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCAC 720
consensus_8391#1      CTGATCACCATCCAAGATCCGGGCAATCTGGACAAGTTCAACATAACCACCTTCCACCAC 639
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      ATCAAGAAGAACCTGCGTGTCCTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAG 780
consensus_8391#1      ATCAAGAAGAACCTGCGCGTCCTCACGGAGGAAGAGCTGGCCGAGCGAAAGGATCCACAG 699
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      GGCCGGCTGAAAACAATCTCCGCCGAAACGAAGGACATTCTGACGCAGCTGGAAAAGGAC 840
consensus_8391#1      GGCCGGCTGAAACCAATCTCCGCCGAAACGAAGGACATTCTCACGCAGCTCGAAAAGGAC 759
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      TACAAAGCACCGTTTTTTTTTTTTTTTAGAGCGGCAGGTTGCGGACAAGTTCAATGCAGC 900
consensus_8391#1      TACAAAGCACCGGAAGAGC----------------------------------------- 778
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      TCACTACTCAACCGGGGCGGTGGCGGCTTCCTTTACCTCCACTGCGATGGTGCCGGTGTC 960
consensus_8391#1      ------------------------------------------------------------
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      GAACCACGAGGCAGCAATAATCGACGATGACATTGTACGCTACGAGCGGGTCAAGAAGAA 1020
consensus_8391#1      ------------------------------------------------------------
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      GGGCTACGTGCGGCTGCTGACCAACTTTGGCGCCCTAAACCTCGAGCTGTACTGTGAGCA 1080
consensus_8391#1      ------------------------------------------------------------
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      GGTGCCGAAGACGTGCGAAAACTTCCTGAAGAACTGCCAAAGCGGCTACTACAACGAGTG 1140
consensus_8391#1      ------------------------------------------------------------
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      GCACGGCCAACGATGCATTGAAAGCGAAGAAACGTAAAGTAGCAAGTGTTGATGGTTTCG 1200
consensus_8391#1      ------------------------------------------------------------
consensus_8391#3      ------------------------------------------------------------
consensus_8391#2      ------------------------------------------------------------
                                                                                  

consensus_8391#0      GTAATTTTAGCTCGTGGTGATTTTAGAACAAATAAATTTGGGTCATT 1247
consensus_8391#1      -----------------------------------------------
consensus_8391#3      -----------------------------------------------
consensus_8391#2      -----------------------------------------------
                                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)