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Anopheles gambiae
cluster # 8392 cluster # 8392       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8392#0 length = 1441 sequences # 3  
consensus_8392#1 length = 1325 sequences # 4  
consensus_8392#2 length = 669 sequences # 1  
consensus_8392#3 length = 635 sequences # 2  

consensusID : consensus_8392#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1441
fasta sequence
                              [CCGCCCACGCGTCCGGAACCGGACTCAATTAAACGTCCGATCCGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGAACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAAT--AAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCC-CAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGT--ATGTGTGTGTGTGTGTGATTTTGCACCCAAACTAAAGCGCACCTTAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACATACGCAAAGCGGATCCGTCCTGGCCGACGCAACCCTGCCGGCACGCTGGAGAGTACAACTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGTCTGCGATCATGCCTATCTGCCGACGTTGGCTCAGTCCATCTTCTTCCTGGGCGCGATCGTCGGTGGCCTGCTGTTCGGCTGGATTGCGGATCGCTACGGGCGCATTCCCGCCCTAGCCGGGTGCAATCTCATCGGCTTTGCGGCCGGTGTCGCTACCGCATTCGTCGGCAACTTCTGGCAGTTCAGCTTGTGCCGGTTTCTGGTCGGATTTGCCTTCGACAACTGCTTCACCATGATGTACATTTTAGTTCTGGAATACGTTGGCCCGAAATGGCGCACCTTTGTCGCCAACATGTCGATCGCACTGTTCTTCACCACCGCTTCCTGCGCACTGCCCTGGATTGCGTACTACCTGGCAGACTGGAAAACGTTCGCCATTGTCACATCGGCACCGCTTGCTTTGGCCATCCTTACCCCACTGGTGGTACCGGAATCGGCAAGATGGCTCGTTTCGCAGGGTAAGATTGACAAAGCCATCGGAATCCTGAAGAAGTTTGAAACGATCAACAAGAAGACGATCGATGCCAAGGTGTATCAGGAGTTCAGTGACAGCTGCGTGCGGCTTCAGGAGGAAGAAGCTGCTAATAGCAACTACTCCGTACTGGATCTGTTCAAGACGCCACGGCTGCGC]

[+] EMBL BM577768             [CCGCCCACGCGTCCGGAACCGGACTCAATTAAACGTCCGATCCGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGAACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCC CAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGT  ATGTGTGTGTGTGTGTGATTTTGCACCCAAACTAAAGCGCACCTTAAAGTGAAGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS092IB             [                                     CGATCCGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTAAAAGCAGCGCACTTGCGTGGTTCAGAACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAAT  AAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCCTCTGTGTA  TGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATTTAAGTGTGCAAGTGTGTGTAAATGTGTATGTGTGTGTGATTTTGCACCAAAACTAAAGCGCACTTCAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACATACGCAAAGCGGATCCGTCCTGGCCGACGCAACCCTGCCGGCACGCTGGAGAGTACAACTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGTCTGCGATCATGCCTATCTGCCGACGTTGGCTCAGTCCATCTTCTTCCTGGGCGCGATCGTCGGTGGCCTGCTGTTCGGCTGGATTGCGGATCGCTACGGGCGCATTCCCGCCCTAGCCGGGTGCAATCTCATCGGCTTTGCGGCCGGTGTCGCTACCGCATTCGTCGGCAACTTCTGGCAGTTCAGCTTGTGCCGGTTTCTGGTCGGATTTGCCTTCGACAACTGCTTCACCATGATGTACATTTTAGTTCTGGAATACGTTGGCCCGAAATGGCGCA                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM616087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgCTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGTCTGCGATCATGCCTATCTGCCGACGTTGGCTCAGTCCATCTTCTTCCTGGGCGCGATCGTCGGTGGCCTGCTGTTCGGCTGGATTGCGGATCGCTACGGGCGCATTCCCGCCCTAGCCGGGTGCAATCTCATCGGCTTTGCGGCCGGTGTCGCTACCGCATTCGTCGGCAACTTCTGGCAGTTCAGCTTGTGCCGGTTTCTGGTCGGATTTGCCTTCGACAACTGCTTCACCATGATGTACATTTTAGTTCTGGAATACGTTGGCCCGAAATGGCGCACCTTTGTCGCCAACATGTCGATCGCACTGTTCTTCACCACCGCTTCCTGCGCACTGCCCTGGATTGCGTACTACCTGGCAGACTGGAAAACGTTCGCCATTGTCACATCGGCACCGCTTGCTTTGGCCATCCTTACCCCACTGGTGGTACCGGAATCGGCAAGATGGCTCGTTTCGCAGGGTAAGATTGACAAAGCCATCGGAATCCTGAAGAAGTTTGAAACGATCAACAAGAAGACGATCGATGCCAAGGTGTATCAGGAGTTCAGTGACAGCTGCGTGCGGCTTCAGGAGGAAGAAGCTGCTAATAGCAACTACTCCGTACTGGATCTGTTCAAGACGCCACGGCTGCGC]


>consensus_8392#0 CCGCCCACGCGTCCGGAACCGGACTCAATTAAACGTCCGATCCGCACACTACCCGGTCGA GCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGA ACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACG GATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAGATC GTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTT CTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTC GAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGTTGCCTC TATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTAT GTGTGTGTGTGTGTGATTTTGCACCCAAACTAAAGCGCACCTTAAAGTGAAGACGAAAAC GAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATATACACACGTGT TGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCA CGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACATACGCAAAGCGGATCC GTCCTGGCCGACGCAACCCTGCCGGCACGCTGGAGAGTACAACTTTACGGACGTACCGTA TCAAACCGCAGCAACGGATTTCGAATGGGTCTGCGATCATGCCTATCTGCCGACGTTGGC TCAGTCCATCTTCTTCCTGGGCGCGATCGTCGGTGGCCTGCTGTTCGGCTGGATTGCGGA TCGCTACGGGCGCATTCCCGCCCTAGCCGGGTGCAATCTCATCGGCTTTGCGGCCGGTGT CGCTACCGCATTCGTCGGCAACTTCTGGCAGTTCAGCTTGTGCCGGTTTCTGGTCGGATT TGCCTTCGACAACTGCTTCACCATGATGTACATTTTAGTTCTGGAATACGTTGGCCCGAA ATGGCGCACCTTTGTCGCCAACATGTCGATCGCACTGTTCTTCACCACCGCTTCCTGCGC ACTGCCCTGGATTGCGTACTACCTGGCAGACTGGAAAACGTTCGCCATTGTCACATCGGC ACCGCTTGCTTTGGCCATCCTTACCCCACTGGTGGTACCGGAATCGGCAAGATGGCTCGT TTCGCAGGGTAAGATTGACAAAGCCATCGGAATCCTGAAGAAGTTTGAAACGATCAACAA GAAGACGATCGATGCCAAGGTGTATCAGGAGTTCAGTGACAGCTGCGTGCGGCTTCAGGA GGAAGAAGCTGCTAATAGCAACTACTCCGTACTGGATCTGTTCAAGACGCCACGGCTGCG C



consensusID : consensus_8392#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1325
fasta sequence
                              [CCG-CGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGAACAAGAAACATAAA-AGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTATGTGTGTGTGTGTGTGATTTTGCACCAAAACTAAAGCGCACCTTAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCGGAGGAGCACTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAAGACGAGCATTAGCCATTCCCGTGGACGAGTCGTACGGAGCGGAGCTGGACGCTGGTGTGGTCGGCGATGGAAGCCCACCGATCAGCTACAGCAAGTGTACGATGTATGCCGTTAACTTCACCGAGGTGCTCGCCAACAACATACGCAAAGCGGATCCGTCCTGGCCGACGCAACCCTGCCGGCACGGCTGGGAGTACAACTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGGTCTGCGA]

[+] EMBL BM591569             [CCG CGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGAACAAGAAACATAAA AGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTATGTGTGTGTGTGTGTGATTTTGCACCAAAACTAAAGCGCACCTTAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGgaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM577467             [CCGCCGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTAAAAGCAGCGCACTTGCGTGGTTCATAACAAGAAACATAAACAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTATCGCGCGCAAACACCGTACTGGATACGTTACTAGTAGCGAAAAAAAAAAAGATCGTGTAACCAATGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGATCTGCAAAATAGCCGTACCCGGAAGGAATCCAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGGTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX622203             [                                  TGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGAACAAGAAACATAAA AGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTATGTGTGTGTGTGTGTGATTTTGCACCAAAACTAAAGCGCACCTTAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGNCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM608808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ccggCGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCGGAGGAGCACTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAAGACGAGCATTAGCCATTCCCGTGGACGAGTCGTACGGAGCGGAGCTGGACGCTGGTGTGGTCGGCGATGGAAGCCCACCGATCAGCTACAGCAAGTGTACGATGTATGCCGTTAACTTCACCGAGGTGCTCGCCAACAACATACGCAAAGCGGATCCGTCCTGGCCGACGCAACCCTGCCGGCACGGCTGGGAGTACAACTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGGTCTGCGA]


>consensus_8392#1 CCGCGCACACTACCCGGTCGAGCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGC AGCGCACTTGCGTGGTTCAGAACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTG TTACAACCCCTGTCGCTTACGGATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAG TAGTAGCAATAAAAAAAAAGATCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAG TGTGCCTGTATATTGTTGCGGTTCTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAA TATGCAACAACAGTAAAAGATTCGAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTAT GTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCA TGCAAGTGTGCAAGTGTGTGTATGTGTGTGTGTGTGTGATTTTGCACCAAAACTAAAGCG CACCTTAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAG CACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCA GAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTA AACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAAC AATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCAC GAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCC ACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGAT CTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATA CCGTTCGCGTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCGG AGGAGCACTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAAGACGAGCAT TAGCCATTCCCGTGGACGAGTCGTACGGAGCGGAGCTGGACGCTGGTGTGGTCGGCGATG GAAGCCCACCGATCAGCTACAGCAAGTGTACGATGTATGCCGTTAACTTCACCGAGGTGC TCGCCAACAACATACGCAAAGCGGATCCGTCCTGGCCGACGCAACCCTGCCGGCACGGCT GGGAGTACAACTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGGTC TGCGA



consensusID : consensus_8392#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence
                              [CCGCCCACGCGTCCGATTCGAGAAAGTGTGAGCAAACGCGGACAACACCAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTAAATGTGTATGTGTGTGTGTGATTTTGCACCAAAACTGAAGCGCACTTCAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATACACACGTGTTGAAAAAACCTCTTCAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAGCGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGT]

[+] EMBL BM595244             [CCGCCCACGCGTCCGATTCGAGAAAGTGTGAGCAAACGCGGACAACACCAGTGTATGTGTGTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTAAATGTGTATGTGTGTGTGTGATTTTGCACCAAAACTGAAGCGCACTTCAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAGCACCAGGATATACACACGTGTTGAAAAAACCTCTTCAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAGCGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGT]


>consensus_8392#2 CCGCCCACGCGTCCGATTCGAGAAAGTGTGAGCAAACGCGGACAACACCAGTGTATGTGT GTGTGTGTCCCGTTGCCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCA AGTGTGCAAGTGTGTGTAAATGTGTATGTGTGTGTGTGATTTTGCACCAAAACTGAAGCG CACTTCAAAGTGAAGACGAAAACGAAACTACTCTAAAACACTATACCAGTGCACACATAG CACCAGGATATACACACGTGTTGAAAAAACCTCTTCAAAACAAAATGACGCCCAAACCAG AGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAGCGAGCCGAGCCTAA ACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACA ATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACG AGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCA CCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATC TGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATAC CGTTCGCGT



consensusID : consensus_8392#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 635
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCCGGAGGAGCACTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAAGACGAGCATTAGCCATTCCCGTGGACGAGTCGTACGGAGCGGGAGCTGGACGCTGGTGTGGTCGGCGATGG]

[+] EMBL BM585511             [CCGCCCACGCGTCCGCCCACGCGTCCGCATAGCACCAGGATATATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCCGGAGGAGCACTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAAGACGAGCATTAGCCATTCCCGTGGACGAGTCGTACGGAGCGGGAGCTGGACGCTGGTGTGGTCGGCGATGG]
[+] EMBL BM584515             [                                        ccgATACACACGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAAGCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCCGATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCCGGAGGAGCACTGGTGCTACGTGCC                                                                                                    ]


>consensus_8392#3 CCGCCCACGCGTCCGCCCACGCGTCCGCATAGCACCAGGATATATACACACGTGTTGAAA ACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTCGTGCACGTCG GCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACAGTGCCAGCCTGAGCAATCTAA GCGCTAACCTGAAGCTGAACGCCTTCATCAACAATGGCTTCGTGAGCGACTGTGCCCAGG CGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGCAAGGAGACAAAGA ACAGCAACCAGCATGGTGTCGTGATGGTGGCCACCAATGGCGCCAGCACGGGGGCAGCAG TAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGTGGGCGAGTTTGGCC GATATCAGAAGATACTGTTCCTGCTGATGATACCGTTCGCGTTCTTTGTGGCGTTCGTGT ACTTTTCGCAAATTTTCATCACCCTCGTGCCGGAGGAGCACTGGTGCTACGTGCCGGAAC TGCAGCACCTGTCCGTGGAAGAAAGACGAGCATTAGCCATTCCCGTGGACGAGTCGTACG GAGCGGGAGCTGGACGCTGGTGTGGTCGGCGATGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8392#1      ---------------------------------------CCGCGCACACTACCCGGTCGA 21
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      CCGCCCACGCGTCCGGAACCGGACTCAATTAAACGTCCGATCCGCACACTACCCGGTCGA 60
                                                                                  

consensus_8392#1      GCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGA 81
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      GCTGAAGCTGCTTGAAGCTGAGTGAGGCCGCTTGAAAGCAGCGCACTTGCGTGGTTCAGA 120
                                                                                  

consensus_8392#1      ACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACG 141
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      ACAAGAAACATAAAAGATAGATCGCGAGTTTTTTGTTTGTTACAACCCCTGTCGCTTACG 180
                                                                                  

consensus_8392#1      GATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAAAGA 201
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      GATGTTTAGCGCGCGCAAACACCGTACTGGATAGGTTAGTAGTAGCAATAAAAAAAGATC 240
                                                                                  

consensus_8392#1      TCGTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGG 261
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      GTGTAACCAGTGACCAGGAGTGAAGTACCACGAAAAGTGTGCCTGTATATTGTTGCGGTT 300
                                                                                  

consensus_8392#1      TTCTGCAAAA--TAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAG 319
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      -----------------------------------------CCGCCCACGCGTCCGATTC 19
consensus_8392#0      CTGCAAAATAGCCGTACCCGGAAGGAATCGAGTAAAATATGCAACAACAGTAAAAGATTC 360
                                                                                  

consensus_8392#1      ATTCGAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGTTG 379
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      GAGAAAGTGTGAGCAAACGCGGACAACACCAGTGTATGTGTGTGTGTGTCCCGTTGCCTC 79
consensus_8392#0      GAGAAAGTGTGAGCAAACGCGGACAACCCCAGTGTATGTGTGTGTGTGTCCCGTTGCCTC 420
                                                                                  

consensus_8392#1      CCTCTATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGT 439
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      TATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTAA 139
consensus_8392#0      TATAGTTCTTCCGCAAAGTGAGTGTATATCCTTCGCATGCAAGTGTGCAAGTGTGTGTA- 479
                                                                                  

consensus_8392#1      GTATGTGTGTGTGTGTGTGATTTTGCACCAAAACTAAAGCGCACCTTAAAGTGAAGACGA 499
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ATGTGTATGTGTGTGTGTGATTTTGCACCAAAACTGAAGCGCACTTCAAAGTGAAGACGA 199
consensus_8392#0      ---TGTGTGTGTGTGTGTGATTTTGCACCCAAACTAAAGCGCACCTTAAAGTGAAGACGA 536
                                                                                  

consensus_8392#1      AAACGAAACTACTCTAAAACACTATACCA-GTGCACACATAGCACCAGGATATATACACA 558
consensus_8392#3      ----------CCGCCCACGCGTCCGCCCACGCGTCCGCATAGCACCAGGATATATACACA 50
consensus_8392#2      AAACGAAACTACTCTAAAACACTATACCA-GTGCACACATAGCACCAGGATATACACACG 258
consensus_8392#0      AAACGAAACTACTCTAAAACACTATACCA-GTGCACACATAGCACCAGGATATATACACA 595
                                 * *  *  *      *** * *  * ***************** **** 

consensus_8392#1      CGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTC 618
consensus_8392#3      CGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTC 110
consensus_8392#2      TGTTGAAAAAACCTCTTCAAAA-CAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTC 317
consensus_8392#0      CGTGTTGAAAACCGCTTCAAAAACAAAATGACGCCCAAACCAGAGGAAAGCATTCCGGTC 655
                       **    ****** ******** *************************************

consensus_8392#1      GTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACA-GTGCCAGCCT 677
consensus_8392#3      GTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACA-GTGCCAGCCT 169
consensus_8392#2      GTGCACGTCGGCGACGAGCGGGAGCTGAGCGAGCCGAGCCTAAACAACA-GTGCCAGCCT 376
consensus_8392#0      GTGCACGTCGGCGACGAGCGGGAGCTGAACGAGCCGAGCCTAAACAACATACGCAAAGCG 715
                      **************************** ********************   ** *  * 

consensus_8392#1      GAGCAATCTAAGCGCTAACCTGAAGCTGAACGC-CTTCATCAACAATGGCTTCGTGAGCG 736
consensus_8392#3      GAGCAATCTAAGCGCTAACCTGAAGCTGAACGC-CTTCATCAACAATGGCTTCGTGAGCG 228
consensus_8392#2      GAGCAATCTAAGCGCTAACCTGAAGCTGAACGC-CTTCATCAACAATGGCTTCGTGAGCG 435
consensus_8392#0      GATCCGTCCTGGC--CGACGCAACCCTGCCGGCACGCTGGAGAGTACAACTTTACGGACG 773
                      ** *  **   **    **   *  ***   ** *       *  *   ***   *  **

consensus_8392#1      -ACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGC 795
consensus_8392#3      -ACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGC 287
consensus_8392#2      -ACTGTGCCCAGGCGGCGGAGAAGCAGCCCGGCAAGGATAATCACGAGGACGAGCTGCGC 494
consensus_8392#0      TACCGTATC-AAACCGCAGCAACGGATTTCGAATGGGTCTGCGATCATGCCTATCTGCCG 832
                       ** **  * *  * ** *  * * *   **    **      *  * * * * ****  

consensus_8392#1      AAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGAT-GGTGGCCACCAATGGCGCCAG 854
consensus_8392#3      AAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGAT-GGTGGCCACCAATGGCGCCAG 346
consensus_8392#2      AAGGAGACAAAGAACAGCAACCAGCATGGTGTCGTGAT-GGTGGCCACCAATGGCGCCAG 553
consensus_8392#0      ACGTTGGCTCAGTCCATCTTCTTCCTGGGCGCGATCGTCGGTGGCCTGCTGTTCGGCTGG 892
                      * *  * *  **  ** *  *   *  ** *   *  * *******  *  *   **  *

consensus_8392#1      CACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGT 914
consensus_8392#3      CACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGT 406
consensus_8392#2      CACGGGGGCAGCAGTAGCCGAAAAACCGGTCGTAGACTTTGACGATCTGCTGCCGCACGT 613
consensus_8392#0      ATTGCGGATCGCTACGGGCGCATT-CCCGCCCTAGCCGGGTGCAATCTCATCGGCTTTGC 951
                         * **   **    * ** *   ** * * *** *     * ****  *       * 

consensus_8392#1      GGGCGAGTTTG-----GCCGATATCAGAAGATACTGTTCCTGCTGATGATACCG-TTCGC 968
consensus_8392#3      GGGCGAGTTTG-----GCCGATATCAGAAGATACTGTTCCTGCTGATGATACCG-TTCGC 460
consensus_8392#2      GGGCGAGTTTG-----GCCGATATCAGAAGATACTGTTCCTGCTGATGATACCG-TTCGC 667
consensus_8392#0      GGCCGGTGTCGCTACCGCATTCGTCGGCAACTTCTGGCAGTTCAGCTTGTGCCGGTTTCT 1011
                      ** **   * *     **     ** * *  * ***    * * * *  * *** **   

consensus_8392#1      GTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGC-GGAGGAGCA 1027
consensus_8392#3      GTTCTTTGTGGCGTTCGTGTACTTTTCGCAAATTTTCATCACCCTCGTGCCGGAGGAGCA 520
consensus_8392#2      GT---------------------------------------------------------- 669
consensus_8392#0      GGTCGGATTTGCCTTCGACAACTGCTTCACCATGATGTACATTTTAGTTCTGGAATA-CG 1070
                      *                                                           

consensus_8392#1      CTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAA--GACGAGCATTAGCC 1085
consensus_8392#3      CTGGTGCTACGTGCCGGAACTGCAGCACCTGTCCGTGGAAGAAA--GACGAGCATTAGCC 578
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      TTGGCCCGAAATGGCGCACCTTTGTCGCCAACATGTCGATCGCACTGTTCTTCACCACCG 1130
                                                                                  

consensus_8392#1      ATTCCCGTGGACGAGTC-GTACGGAGCGG-AGCTGG-ACGCTGGTGTG-GTCGGCGATGG 1141
consensus_8392#3      ATTCCCGTGGACGAGTC-GTACGGAGCGGGAGCTGG-ACGCTGGTGTG-GTCGGCGATGG 635
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      CTTCCTGCGCACTGCCCTGGATTGCGTACTACCTGGCAGACTGGAAAACGTTCGCCATTG 1190
                                                                                  

consensus_8392#1      AAGCCCACCGATCAGCTACAGCAAGTGTACGATGTATGCCGTTAACTTCACCGAGGTGCT 1201
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      TCACATCGGCACCGCTTGCTTTGGCCATCCTTACCCCACTGGTGGTACCGGAATCGGCAA 1250
                                                                                  

consensus_8392#1      CGCCAACAACATACGCAAAGCGGATCCGTCCTGGCCGACGCAACCCTGCCGGCACGGCTG 1261
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      GATGGCTCGTTTCGCAGGGTAAGATTGACAAAGCCATCGGAATCCTGAAGAAGTTTGAAA 1310
                                                                                  

consensus_8392#1      GGAGTACAACTTTACGGACGTACCGTATCAAACCGCAGCAACGGATTTCGAATGGGGTCT 1321
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      CGATCAACAAGAAGACGATCGATGCCAAGGTGTATCAGGAGTTCAGTGACAGCTGCGTGC 1370
                                                                                  

consensus_8392#1      GCGA-------------------------------------------------------- 1325
consensus_8392#3      ------------------------------------------------------------
consensus_8392#2      ------------------------------------------------------------
consensus_8392#0      GGCTTCAGGAGGAAGAAGCTGCTAATAGCAACTACTCCGTACTGGATCTGTTCAAGACGC 1430
                                                                                  

consensus_8392#1      -----------
consensus_8392#3      -----------
consensus_8392#2      -----------
consensus_8392#0      CACGGCTGCGC 1441
                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)