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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8402#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1482 fasta sequence
[GGCAGAATCCCCCGCGGTTTAAAGACTAAAAGCGAAAAAGGCNTATCTTAAGACAAATTGTTCCCGGACAACACGCAGCAGCAGCATAGCAGAGCAGGGCAGCATGCAAGCAGAGAGAATCCCCAAGAAAGCGTAAGAACCAGCAAGCCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGATGTGGCCACCGCGTAAGTGGCACTGATCGTAGTGCCGGCGTGTTTCAGGTGCATTCGGTTTAGTATAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTTCTTTTCGATATACAAAAAACAAAACAGTCACAATTGGGCAGCTAATATTCCATTCTAATACCCAGCTCAGAGCGATATATCTTCCAACAAAGCATGGTGATCGTGATCATTTGTGTAGATNAAAACAGAGACCGTATNTTTCCAGAGCAATGTATACATTCCACAAAACATTTTTATCCACTACCAGACAGGCATAGTTCACAGGGACAGATTGTATGTTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACGCTGGGTTTTTGCTAACGCAAGAACGAACGAAAGGGACCATCGGGCNTGTATTTGGTATTTAGNGGCGATNNTNTANNAAAAAGTAGATTGACGGGGATTAACGATCCCCTTCTCTTACATTATTACATATNGTANTAAAAGGTTTTAGATGAAACTAGTAACTCGNAAGNAGCTGTAAGTANAGTAAAGTGTANCACATGTTATAGGTCATATACTGGTGGTNTGCNATGGCAACCACGNCCATGNTNCCTGTTAACGAAATAATTACGCAAANTCGGTCACTTACGTACNCAACNACTCAAACNTACCACCACGGGCAGTTTTGNGGCCCGCAAGAATANACCCCTTCAAATGAGGGCTNATATTGACCTCATGNACACGTGCCGCANGTAATANCAACNCTGGGACTGNGTNAAACCCGTGCGTGTCCCCAANAATATGNTTNGNACAATCCCATATTCGCCAGTGNGNANAACACAAAGCANCCNNNGACCCCCCAAGTGGGCCNCTAGAGTCNGTAAGCCCCTAAGGCGCACAAANGAAGGTGTTGATCGAGTNAACGAAAATGGAAGCGAATCACACNTNNNGGCGNGCAACANACTATATTTATTTTTNTTTANACTGAGAGAGAGNNGGANACATCAAGCNAACGACTCNCANNCCATGCCACGGGCGGCGGGGGACCGGGGCGAGGNGNNGNCCNNGCGGGAAGCGGGGGNGNNAGGANNNNGGNNCGGGGGANNGANCGAGAAANAANGGNGANNGGGNAGAGGAGGNGGGGGAGCGCGNAACAGCCCGANANANNGCGGCGANGNNANAGANGAGCANGNGCACGAAGANCCANACANACGGGNGGACCNGGTCNNNGNNGNAGGGGNGGGGGGAGGNGGGANCGNCANCGGGNANNCACGAGGGACANANGGAGGGAAN]
[+] EMBL AL695070 [GGCAGAATCCCCCGCGGTTTAAAGACTAAAAGCGAAAAAGGCNTATCTTAAGACAAATTGTTCCCGGACAACACGCAGCAGCAGCATAGCAGAGCAGGGCAGCATGCAAGCAGAGAGAATCCCCAAGAAAGCGTAAGAACCAGCAAGCCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGATGTGGCCACCGCGTAAGTGGCACTGATCGTAGTGCCGGCGTGTTTCAGGTGCATTCGGTTTAGTATAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTTCTTTTCGATATACAAAAAACAAAACAGTCACAATTGGGCAGCTAATATTCCATTCTAATACCCAGCTCAGAGCGATATATCTTCCAACAAAGCATGGTGATCGTGATCATTTGTGTAGATNAAAACAGAGACCGTATNTTTCCAGAGCAATGTATACATTCCACAAAACATTTTTATCCACTACCAGACAGGCATAGTTCACAGGGACAGATTGTATGTTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACGCTGGGTTTTTGCTAACGCAAGAACGAACGAAAGGGACCATCGGGCNTGTATTTGGTATTTAGNGGCGATNNTNTANNAAAAAGTAGATTGACGGGGATTAACGATCCCCTTCTCTTACATTATTACATATNGTANTAAAAGGTTTTAGATGAAACTAGTAACTCGNAAGNAGCTGTAAGTANAGTAAAGTGTANCACATGTTATAGGTCATATACTGGTGGTNTGCNATGGCAACCACGNCCATGNTNCCTGTTAACGAAATAATTACGCAAANTCGGTCACTTACGTACNCAACNACTCAAACNTACCACCACGGGCAGTTTTGNGGCCCGCAAGAATANACCCCTTCAAATGAGGGCTNATATTGACCTCATGNACACGTGCCGCANGTAATANCAACNCTGGGACTGNGTNAAACCCGTGCGTGTCCCCAANAATATGNTTNGNACAATCCCATATTCGCCAGTGNGNANAACACAAAGCANCCNNNGACCCCCCAAGTGGGCCNCTAGAGTCNGTAAGCCCCTAAGGCGCACAAANGAAGGTGTTGATCGAGTNAACGAAAATGGAAGCGAATCACACNTNNNGGCGNGCAACANACTATATTTATTTTTNTTTANACTGAGAGAGAGNNGGANACATCAAGCNAACGACTCNCANNCCATGCCACGGGCGGCGGGGGACCGGGGCGAGGNGNNGNCCNNGCGGGAAGCGGGGGNGNNAGGANNNNGGNNCGGGGGANNGANCGAGAAANAANGGNGANNGGGNAGAGGAGGNGGGGGAGCGCGNAACAGCCCGANANANNGCGGCGANGNNANAGANGAGCANGNGCACGAAGANCCANACANACGGGNGGACCNGGTCNNNGNNGNAGGGGNGGGGGGAGGNGGGANCGNCANCGGGNANNCACGAGGGACANANGGAGGGAAN]
consensusID : consensus_8402#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1225 fasta sequence
[CCGCGGACGCGTGGGGTTCGGCATCACGGGCGCGTCTATTAAGATTGCTGAACTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGTATCTTGACAACGGTGGCAATTGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACG-GCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAG-AG-GCGAGAAGTTATTC-TTTTTTGGGGAAA-GACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAACGAGAGAGATAGAGAGAGGG-AGATGA-AGAGAGAGAATCCCAAGTAAAGCGTAAGAACAGCAAGCAAATGGAGCTGTTCAGTGCATGTGCTCCGTTNAGGGTGAGTGGCCCACACTGCGTAAGTGGCACTGATCGTCAGATGCCGGCGCTGTTTCGGTGCATACGTGTATTAGTATAGCGGGTACAAGTGATATGTATCCTAGGCCATCAAATCAATCAGCGTAGTCAGGTGTAATCCTCTATTCGGATATTACGAACAAAGANGAAGAACCCAGGTCNACGAAGTGGGCAAGGCTAAATNATATCCCATTCTTAAATCGCCAGGCTCAGCAGCGGATATAATTCTTTTCCCAAACCTACAANAGTTGGGNTTGAATCCCGTGAAGTACCATCACGAGGTGTACNGCACTTACAAAANCCACGAAGAANCACGGNTAANTTAATAACCCAAGATGGCNAACTGGTNAGTAGCATTTCCCCACAAANACACCACTNCNNCAATTACCCAACTCCCACAGNACCACGGGGCCANTANAGGTCTTNAACGNGGGAAAAGGAATATGGAAGTGT]
[+] EMBL BM590638 [CCGCGGACGCGTGGGGTTCGGCATCACGGGCGCGTCTATTAAGATTGCTGAACTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGTATCTTGACAACGGTGGCAATTGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACG GCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAG AG GCGAGAAGTTATTC TTTTTTGGGGAAA GACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAACGAGAGAGATAGAGAGAGGG AGATGA AGAGAG ]
[+] EMBL AL934602 [ gttAAGATATCGAGGGCNTTGCGGACGANGATACGTGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGTAGTGCGAGAAGTTATTCTTTTTTTGGAGAAATGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGCAGATGACAGAGAGAGAATCCCAAGTAAAGCGTAAGAACAGCAAGCAAATGGAGCTGTTCAGTGCATGTGCTCCGTTNAGGGTGAGTGGCCCACACTGCGTAAGTGGCACTGATCGTCAGATGCCGGCGCTGTTTCGGTGCATACGTGTATTAGTATAGCGGGTACAAGTGATATGTATCCTAGGCCATCAAATCAATCAGCGTAGTCAGGTGTAATCCTCTATTCGGATATTACGAACAAAGANGAAGAACCCAGGTCNACGAAGTGGGCAAGGCTAAATNATATCCCATTCTTAAATCGCCAGGCTCAGCAGCGGATATAATTCTTTTCCCAAACCTACAANAGTTGGGNTTGAATCCCGTGAAGTACCATCACGAGGTGTACNGCACTTACAAAANCCACGAAGAANCACGGNTAANTTAATAACCCAAGATGGCNAACTGGTNAGTAGCATTTCCCCACAAANACACCACTNCNNCAATTACCCAACTCCCACAGNACCACGGGGCCANTANAGGTCTTNAACGNGGGAAAAGGAATATGGAAGTGT]
consensusID : consensus_8402#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 832 fasta sequence
[CAATCCCCCNGGTTAAGATATCGAGGCATTGCGGCACGAGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTCACCATCACGAAGTANAGCCGCACTAGAGGCGAGAAGTTATTCTTTTCTTGGAGAAAGACTACAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTCTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGCGTGATCGTGATCATTAGTGTAGATAAACACANAGACCGATNCCACGAGCAAATGTATACATTCCAAAAAACATATCTTATCCACTCCAGCACAAGGCATAGTTAAAGGGAAAGAATTGTCATGTGACTACAGAGAGAATGACCANAAATNCCTGGCCCGATATATCAGANGCGGNGGGGTTNTGCCTACGCAAGAAACGACTAACAGGGGACCACTCGGGCCATNGTATCTGGAATAACCGCGTCTTTTNACGTGAAAGGGATACGATCCNCTCCTNNAATCATACTTTGTAAAAGTTTAAGCAATACTANCCCACAGCGGAANTAATACGNTACCCTGNATNCATAG]
[+] EMBL AL932346 [CAATCCCCCNGGTTAAGATATCGAGGCATTGCGGCACGAGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTCACCATCACGAAGTANAGCCGCACTAGAGGCGAGAAGTTATTCTTTTCTTGGAGAAAGACTACAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTCTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGCGTGATCGTGATCATTAGTGTAGATAAACACANAGACCGATNCCACGAGCAAATGTATACATTCCAAAAAACATATCTTATCCACTCCAGCACAAGGCATAGTTAAAGGGAAAGAATTGTCATGTGACTACAGAGAGAATGACCANAAATNCCTGGCCCGATATATCAGANGCGGNGGGGTTNTGCCTACGCAAGAAACGACTAACAGGGGACCACTCGGGCCATNGTATCTGGAATAACCGCGTCTTTTNACGTGAAAGGGATACGATCCNCTCCTNNAATCATACTTTGTAAAAGTTTAAGCAATACTANCCCACAGCGGAANTAATACGNTACCCTGNATNCATAG]
consensusID : consensus_8402#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 831 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCTGAGCTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGCATCTTGACAACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAG-AGGCGAGAAGTTATTC-TTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGA-----A-AGA--GAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTACTGATGTGCTCCGTTAGGGTGAGAGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCT]
[+] EMBL BM625551 [CCGCGGACGCGTGGGCGGACGCGTGGGCTGAGCTGGATCCTCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGCATCTTGACAACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAAGGCGAGAAGTTATTCTTTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGA A AGA GAGATGAAGAGAGAGAATCCC ]
[+] EMBL BX626877 [ TGATCCGCATCTTGACAACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCATTTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAG AGGCGAGAAGTTATTC TTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGA A AGA GAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTACTGATGTGCTCCGTTAGGGTGAGAGCCACCGCGTAAGGGCAC ]
[+] EMBL BX624958 [ CCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGTCATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGTGTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGGCACCAAGCTGCTCAAGAAAACGAAGCAGCAGCTTGAGCCGTTGGATGGTACGTTGGGCTGGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGCGGGAAGATATCGAGGGCATTGCGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAG AGGCGAGAAGTTATTC TTTTTTGGGGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCT]
consensusID : consensus_8402#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCGCCCACGCGTCCGGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTCTTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAGAGCGATATATCTTCCAACAAAGATGGTGATCGTGATCATTTTGTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGGTTTTGCTACGCAAGAACGAACGAAAGGGA]
[+] EMBL BM641068 [CCGCCCACGCGTCCGGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCGCAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTCTTTTTTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAACGAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGAAAGCGTAAGAACAGCAAGCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGGTGAGGGCCACCGCGTAAGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAGAGCGATATATCTTCCAACAAAGATGGTGATCGTGATCATTTTGTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGGTTTTGCTACGCAAGAACGAACGAAAGGGA]
consensusID : consensus_8402#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGATGATCGTGATCATTTTTTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGTTTTGCTACGCAAGAACGAACGAAAGGGACCATCGGGCATGTATTATGTATTAGCGCGTCTTTTTTTTTGTTTTGACGGGGATAACGATCCCTCTCTTACATTATTACTTTGTTTTAACGTTTTAAATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT]
[+] EMBL BM620565 [CCGCCCACGCGTCCGCCCACGCGTCCGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTCGGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTTCTTTTCGATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATCTTCCAACAAAGATGATGATCGTGATCATTTTTTGTAGATAAAACAGAGACCGTATTTTCCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTCCAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCCCGCTTATCGACCGCTGGGTTTTGCTACGCAAGAACGAACGAAAGGGACCATCGGGCATGTATTATGTATTAGCGCGTCTTTTTTTTTGTTTTGACGGGGATAACGATCCCTCTCTTACATTATTACTTTGTTTTAACGTTTTAAATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT]
consensusID : consensus_8402#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 127 fasta sequence
[CCGCCCACGCGTCCGATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT]
[+] EMBL BM595342 [CCGCCCACGCGTCCGATGAAATAGTACTCGCAAGCGCTGTTAGTTAGTTAGTGTAGCACTGTTATAGCTCATTACTGTTGTTGCATGGAACAAGCATGTACTGTAAGATATAAGAATAGTACTTACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 ------------------------------------------------------------
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GGCAGAATCCCCCGCGGTTTAAAGACTAAAAGCGAAAAAGGCNTATCTTAAGACAAATTG 60
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 ------------------------------------------------------------
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 TTCCCGGACAACACGCAGCAGCAGCATAGCAGAGCAGGGCAGCATGCAAGCAGAGAGAAT 120
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 ------------------------------------------------------------
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 --------------------------------------------------------CCGC 4
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 CCCCAAGAAAGCGTAAGAACCAGCAAGCCAAAGGAGCGTTAGTGATGTGCTCCGTTAGGG 180
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 CCGCGGACGCGTGGGGTTCGGCATCACGGGCGCGTCTATTAAGATTGCTGAACTGGATCC 60
consensus_8402#3 CCGCGGACGCGTGGG-----------CGGACGCGTGG---------GCTGAGCTGGATCC 40
consensus_8402#5 CCACGCGTCCGCCCACGCGTCCGGGCACTGATCGTAGTGCCGGCGTGTTTCGGTGCATTC 64
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 TGATGTGGCCACCGCGTAAGTGGCACTGATCGTAGTGCCGGCGTGTTTCAGGTGCATTCG 240
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 TCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGTATCTTGAC 120
consensus_8402#3 TCACATCGTATCGATCGGTGTCGGTAGCATTTACGCGGTTGCTGTGATCCGCATCTTGAC 100
consensus_8402#5 GGTTTAGTTAGCGTACAGTGTTGTTATAGCCTAATCAATAGCTGTAGTGTTT-CTTTTCG 123
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GTTTAGTATAGCGTACAGTGTTGTTCTAGCCTAATCAATAGCTGTAGTGTTTTCTTTTCG 300
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 AACGGTGGCAATTGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCAT 180
consensus_8402#3 AACGGTGGCAATCGCTTTTGGCGACAAGCTAAACGTCAAGGAGAAGATCTTTGTTGCCAT 160
consensus_8402#5 ATATACAAAAAACAAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAAT-CCCAGCT 182
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 ATATACAAAAAACAAAACAGTCACAATTGGGCAGCTAATATTCCATTCTAATACCCAGCT 360
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 TTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGT 240
consensus_8402#3 TTCCTGGATGTCCAAAGCGACGGTACAGGCCGCCCTCGGTCCCGTCGCCCTGAAGACGGT 220
consensus_8402#5 CAAAGCGATATATCTTCCAACAAAG-ATGATGATCGTGATCATTTTTTGTAGATAAAACA 241
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 CAGAGCGATATATCTTCCAACAAAGCATGGTGATCGTGATCATTTGTGTAGATNAAAACA 420
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 CATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGT 300
consensus_8402#3 CATGTCGAACGAAAACCGCACGGAGGAGGAAGTCCACTACGCCGAGCTGGTGAAGATGGT 280
consensus_8402#5 GAGACCGTATTTT-CCAGAGCAATGTATACATTCCAAAAACATTTTATCCACTC------ 294
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GAGACCGTATNTTTCCAGAGCAATGTATACATTCCACAAAACATTTTTATCCACTACCAG 480
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 GTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGG 360
consensus_8402#3 GTGCATCCTGAGCATCATCCTGACGGCCCCGCTCGGGGCCATTCTCATATCCGTCACCGG 340
consensus_8402#5 -CAGACAGGCATAGTTAAGGGAAGATTGTATGTGACTACGAGGATGCCAGAGATCCTGCC 353
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 ACAGGCATAGTTCACAGGGACAGATTGTATGTTGACTACGAGGATGCCAGAGATCCTGCC 540
consensus_8402#2 ------------------------------------------------------------
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 CACCAAGCTGCTCAAGAAAACGAAGC-AGCAGCTTGAGCCGTTGGATGGTACGTTGGGCT 419
consensus_8402#3 CACCAAGCTGCTCAAGAAAACGAAGC-AGCAGCTTGAGCCGTTGGATGGTACGTTGGGCT 399
consensus_8402#5 CGCTTATCGACCGCTGGGTTTTGCTA-CGCAAGAACGAACGAAAGGGACCATCGGGCATG 412
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 CGCTTATCGACGCTGGGTTTTTGCTAACGCAAGAACGAACGAAAGGGACCATCGGGCNTG 600
consensus_8402#2 -------------------------------------------------CAATCCCCCNG 11
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 GGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGC 479
consensus_8402#3 GGCGGCGAAGTCATCGGCCCTCGCTGCACGACATCAGTATCATCGACGAGGAGGAGGAGC 459
consensus_8402#5 TATTATGTATTAGCGCGTCTTTTTTTTTG-----------TTTTGACGGGGATAACGATC 461
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 TATTTGGTATTTAGNGGCGATNNTNTANNAAAAAGTAGATTGACGGGGATTAACGATCCC 660
consensus_8402#2 GTTAAGATATCGAGG-CATTGCGGCACGAG-ATACGGCTGCCAACACGCTGTCCAACGCG 69
consensus_8402#4 ------CCGCCCACG-CGTC-CGGGACGAGGATACGGCTGCCAACACGCTGTCCAACGCG 52
consensus_8402#1 GGGAAGATATCGAGGGCATTGCGG-ACGAGGATACGGCTGCCAACACGCTGTCCAACGCG 538
consensus_8402#3 GGGAAGATATCGAGGGCATTGCGG-ACGAGGATACGGCTGCCAACACGCTGTCCAACGCG 518
consensus_8402#5 CCTCTCTTACATTATTACTTTGTTTTA----ACGTTTTAAATGAAA--TAGT--A-CTCG 512
consensus_8402#6 ---------------------CCGCCC----ACGCGTCCGATGAAA--TAGT--A-CTCG 30
consensus_8402#0 CTTCTCTTACATTATTACATATNGTANTAAAAGGTTTTAGATGAAAC-TAGT--AACTCG 717
* * * ** * * **
consensus_8402#2 CAAACGGCGACAGCGT-CACCATCACGAAGTANAGCCGCACTAGAGGCGAGAAGTTATTC 128
consensus_8402#4 CAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTC 112
consensus_8402#1 CAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCATTAGAGGCGAGAAGTTATTC 598
consensus_8402#3 CAAACGGCGACAGCGTTCACCATCACGAAGTAGAGCCGCACTAGAGGCGAGAAGTTATTC 578
consensus_8402#5 CAAGC-GCTGTTA-GTTAGTTAGT-TAGTGTAGCAC--TGTTATAGCTCAT-TACTGTTG 566
consensus_8402#6 CAAGC-GCTGTTA-GTTAGTTA-----GTGTAGCAC--TGTTATAGCTCAT-TACTGTTG 80
consensus_8402#0 NAAGNAGCTGTAA-GTANAGTAA---AGTGTANCACA-TGTTATAGGTCATATACTGGTG 772
** ** ** * *** * ** ** * * *
consensus_8402#2 TTTTCTTGGAGAAAGACTACAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAAC 188
consensus_8402#4 TTTT-TTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAAC 171
consensus_8402#1 TTTT-TTGGGGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTACCGGAAAAC 657
consensus_8402#3 TTTT-TTGGAGAAAGACTAAAAGCGAAAAAGGATATCTTAAGACAATTGTTCCGGAAAAC 637
consensus_8402#5 TTGCATGG-AACAAGCATGTAC-TGTAAGA-----TATAAGAATAGTACTTACT------ 613
consensus_8402#6 TTGCATGG-AACAAGCATGTAC-TGTAAGA-----TATAAGAATAGTACTTACT------ 127
consensus_8402#0 GTNTGCNATGGCAACCACGNCCATGNTNCC-----TGTTAACGAAATAATTACGCAAANT 827
* ** * * * * * * * *
consensus_8402#2 GAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAG-AAAGCGTAAGAACAGCA 247
consensus_8402#4 GAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAG-AAAGCGTAAGAACAGCA 230
consensus_8402#1 GAGAGAGATAGAGAGAGGGAGATGAAGAGAGAGAATCCCAAGTAAAGCGTAAGAACAGCA 717
consensus_8402#3 GAGA--------GAAAGAGAGATGAAGAGAGAGAATCCCAAG-AAAGCGTAAGAACAGCA 688
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 CGGTCACTTACGTACNCAACNACTCAAACNTACCACCACGGGCAGTTTTGNGGCCCGCAA 887
consensus_8402#2 AGCAAA-GGAGCGTTAGTG---ATGTGCTCCGTTA-GGGTGAGGGCC----ACCGCGTAA 298
consensus_8402#4 AGCAAA-GGAGCGTTAGTG---ATGTGCTCCGTTA-GGGTGAGGGCC----ACCGCGTAA 281
consensus_8402#1 AGCAAATGGAGCTGTTCAGTGCATGTGCTCCGTTNAGGGTGAGTGGCCCACACTGCGTAA 777
consensus_8402#3 AGCAAA-GGAGCGTTACTG---ATGTGCTCCGTTA-GGGTGAGAGCC----ACCGCGTAA 739
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GAATANACCCCTTCAAATGAGGGCTNATATTGACCTCATGNACACGTGCCGCANGTAATA 947
consensus_8402#2 G-GGCACTGATCGT--AGTGCCGGCG-TGTTTCGGTGCATTCG-GT-TTAGT-TAGCGTA 351
consensus_8402#4 G-GGCACTGATCGT--AGTGCCGGCG-TGTTTCGGTGCATTCG-GT-TTAGT-TAGCGTA 334
consensus_8402#1 GTGGCACTGATCGTCAGATGCCGGCGCTGTTTCGGTGCATACGTGTATTAGTATAGCGGG 837
consensus_8402#3 G-GGCACTGATCGT--AGTGCCGGCG-TGTTTCGGTGCATTCG-GT-TTAGT-TAGCGTA 792
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 NCAACNCTGGGACTGNGTNAAACCCGTGCGTGTCCCCAANAATATGNTTNGNACAATCCC 1007
consensus_8402#2 CAGTGTTGTTCT--AGCCTAATCAATAGCTGTAGTGTTTCTTCTTCGATATACAAAAAAC 409
consensus_8402#4 CAGTGTTGTTCT--AGCCTAATCAATAGCTGTAGTGTTTCTT-TTCGATATACAAAAAAC 391
consensus_8402#1 TACAAGTGATATGTATCCTAGGCCATCAAATCAATCAGCGTAGTCAGGTGTAATCCTCTA 897
consensus_8402#3 CAGTGTTGTTAT--AGCCTAATCAATAGCTGTAGTGTTTCT------------------- 831
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 ATATTCGCCAGTGNGNANAACACAAAGCANCCNNNGACCCCCCAAGTGGGCCNCTAGAGT 1067
consensus_8402#2 AAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAAAGCGATATATC 469
consensus_8402#4 AAAACCAGTCACAATGGCCAGCTAATATTCCATTCTAATCCCAGCTCAGAGCGATATATC 451
consensus_8402#1 TTCGGATATTACGAACAAAGANGAAGAACCCAGGTCNA-CGAAGTGGGCAAGGCTAAATN 956
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 CNGTAAGCCCCTAAGGCGCACAAANGAAGGTGTTGATCGAGTNAACGAAAATGGAAGCGA 1127
consensus_8402#2 TTCCAACAAAGATGCGTGATCGTGATCATTA-GTGTAGATAAACACANAGACCG-ATNCC 527
consensus_8402#4 TTCCAACAAAGATG-GTGATCGTGATCATTTTGTGTAGATAAA-ACAGAGACCGTATTTT 509
consensus_8402#1 ATATCCCATTCTTAAATCGCCAGGCTCAGCA-GCGGATATAATTCTTTTCCCAAACCTAC 1015
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 ATCACACNTNNNGGCGNGCAACANACTATATTTATTTTTNTTTANACTGAGAGAGAGNNG 1187
consensus_8402#2 ACGAGCAAATGTATACATTCCAAAAAACATATCTTATCCACTCCAGCACAAGGCATAGTT 587
consensus_8402#4 CCAGAGCAATGTATACATTCCAAAAA---CATTTTATCCACTCCAG-ACA-GGCATAGTT 564
consensus_8402#1 AANAGTTGGGNTTGAATCCCGTGAAGTACCATCACGAGGTGTACNGCACT-TACAAAANC 1074
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GANACATCAAGCNAACGACTCNCANNCCATGCCACGGGCGGCGGGGGACCGGGGCGAGGN 1247
consensus_8402#2 AAAGGGAAAGAATTGTCATGTGACTACAGAGAGAATGACCANAAATNCCTGGCCCGATAT 647
consensus_8402#4 AAGGGAAGA---TTGT-ATGTGACTAC---GAGGATG-CCAGAGATCCT--GCCCGCT-T 613
consensus_8402#1 CACGAAGAANCACGGNTAANTTAATAACCCAAGATGGCNAACTGGTNAGTAGCATTTCCC 1134
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GNNGNCCNNGCGGGAAGCGGGGGNGNNAGGANNNNGGNNCGGGGGANNGANCGAGAAANA 1307
consensus_8402#2 ATCAGANGCGGNGGGGTTNTGCCTACGCAAGAAACGACTAACAGGGGACCACTCGGGCCA 707
consensus_8402#4 ATCGACCGC--TGGGGTTTTGC-TACGCAAGAA-CGAACGAAAGGGA------------- 656
consensus_8402#1 CACAAANACACCACTNCNNCAATTACCCAACTCCCACAGNACCACGGGGCCANTANAGGT 1194
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 ANGGNGANNGGGNAGAGGAGGNGGGGGAGCGCGNAACAGCCCGANANANNGCGGCGANGN 1367
consensus_8402#2 TNGTATCTGGAATAACCGCGTCTTTTNACGTGAAAGGGATACGATCCNCTCCTNNAATCA 767
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 CTTNAACGNGGGAAAAGGAATATGGAAGTGT----------------------------- 1225
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 NANAGANGAGCANGNGCACGAAGANCCANACANACGGGNGGACCNGGTCNNNGNNGNAGG 1427
consensus_8402#2 TACTTTGTAAAAGTTTAAGCAATACTANCCCACAGCGGAANTAATACGNTACCCTGNATN 827
consensus_8402#4 ------------------------------------------------------------
consensus_8402#1 ------------------------------------------------------------
consensus_8402#3 ------------------------------------------------------------
consensus_8402#5 ------------------------------------------------------------
consensus_8402#6 ------------------------------------------------------------
consensus_8402#0 GGNGGGGGGAGGNGGGANCGNCANCGGGNANNCACGAGGGACANANGGAGGGAAN----- 1482
consensus_8402#2 CATAG 832
consensus_8402#4 -----
consensus_8402#1 -----
consensus_8402#3 -----
consensus_8402#5 -----
consensus_8402#6 -----
consensus_8402#0 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||