These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8403#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1385 fasta sequence [TGCAGCAGATAGCCCAGGCTTATTGAGATGCTGCAACTAAAANAATAGAATAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACTGCCGTCTTTATGTAGCATATGCACAAATATAGATCTTGCTCGTTGCAAGTGAGACTATGGCTATGGAGATATTCCAAAAATACTNAGGCTTAGCTGACATGATCANATNACCCAGCCCGTTGCATAGTGATAACNGGTCTTATATCAACTTGGCGTACTGGGNGATTAGTNCCCCGNAAATCCTTCCCCATTGNAACNGNAGNTNTACTCAATACCTAACCACAAAGTTGGAATNTACACCCTGTGGCATGGTCCCCTGGCAACCCACGGGCACGCCTNGACCACGGCCAGGGGTATCCCCCGGGNAGTAACGTGGGANTAAAAGGNCTTGGCCACANCAGCGAANCAATCCCCGACTAACCACGGGGGCGNCCGTAACCANAACAACGACCAACTTGGCNCCTCCANAAACGTCCGACATTGGNAAGNACCCAACACAACCNGACGNCCCGCACGCATGGCCTAGCGCAACAACGCCGGGACCAACCATANGGNAGANCAACGAGAAACCCANGGCCNTGACTACACAACCACCCTTCCCGTTACCCCCCCACAACGCGCACACNAAAGACTAACCACGAACAGCACACTGGGCCNTCCTGGCACCNACGAAAGCACAGGNCTGACCAATGTACACCTCCCATNNAAACCTCAACCCAANCACAAAAANCANCCGATTACCCCCTCAATATAGCGACAAAACNGCACGCCNAATCAACAANTAACCCGANCAACCAAAGACCCACCCAGNGAGCCCCACAGCGCCAAAANTAAACNANNAAGGACTACCCCAATGGGGCACAACCACAGAGGCACCACNGCCAAANCGGACAACACATGATGCCCTNAGGGGAGCAGACCTCNGGGGCNACTAGGGNACNGGAGCCACCCCGAACACCCCCAGGGAGGCCNANCGANCGACACACAANGGGCCGGCAAAACACAAAACCNGGAGNGCACAACCACAGCCATAAGGGCCCAGGACCCAACCAACAACGGAACANAACCCGGAANAAAANNGGCATNGAAAAACAACAACACCCCACAACCANAGCCCAGCACCGCACACGGCCAGAGGGCACGGCCGAACGNANCGCCGGCCACACNCANAACNACACCNAACAANCANGGCAAANCACGCACAGGGAGCAGAACNGAGCCGCAGGCCACCTAACACNGACNAACCAAAGCGGGGAACACTATAAANCNAAACCCCNACCCCGANCCAACCAGAAAGGGAAGACGAAAAAAAGAAAGCAGAACGAANGANACTAAAAACGCAAAAC] [+] EMBL AL693231 [TGCAGCAGATAGCCCAGGCTTATTGAGATGCTGCAACTAAAANAATAGAATAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACTGCCGTCTTTATGTAGCATATGCACAAATATAGATCTTGCTCGTTGCAAGTGAGACTATGGCTATGGAGATATTCCAAAAATACTNAGGCTTAGCTGACATGATCANATNACCCAGCCCGTTGCATAGTGATAACNGGTCTTATATCAACTTGGCGTACTGGGNGATTAGTNCCCCGNAAATCCTTCCCCATTGNAACNGNAGNTNTACTCAATACCTAACCACAAAGTTGGAATNTACACCCTGTGGCATGGTCCCCTGGCAACCCACGGGCACGCCTNGACCACGGCCAGGGGTATCCCCCGGGNAGTAACGTGGGANTAAAAGGNCTTGGCCACANCAGCGAANCAATCCCCGACTAACCACGGGGGCGNCCGTAACCANAACAACGACCAACTTGGCNCCTCCANAAACGTCCGACATTGGNAAGNACCCAACACAACCNGACGNCCCGCACGCATGGCCTAGCGCAACAACGCCGGGACCAACCATANGGNAGANCAACGAGAAACCCANGGCCNTGACTACACAACCACCCTTCCCGTTACCCCCCCACAACGCGCACACNAAAGACTAACCACGAACAGCACACTGGGCCNTCCTGGCACCNACGAAAGCACAGGNCTGACCAATGTACACCTCCCATNNAAACCTCAACCCAANCACAAAAANCANCCGATTACCCCCTCAATATAGCGACAAAACNGCACGCCNAATCAACAANTAACCCGANCAACCAAAGACCCACCCAGNGAGCCCCACAGCGCCAAAANTAAACNANNAAGGACTACCCCAATGGGGCACAACCACAGAGGCACCACNGCCAAANCGGACAACACATGATGCCCTNAGGGGAGCAGACCTCNGGGGCNACTAGGGNACNGGAGCCACCCCGAACACCCCCAGGGAGGCCNANCGANCGACACACAANGGGCCGGCAAAACACAAAACCNGGAGNGCACAACCACAGCCATAAGGGCCCAGGACCCAACCAACAACGGAACANAACCCGGAANAAAANNGGCATNGAAAAACAACAACACCCCACAACCANAGCCCAGCACCGCACACGGCCAGAGGGCACGGCCGAACGNANCGCCGGCCACACNCANAACNACACCNAACAANCANGGCAAANCACGCACAGGGAGCAGAACNGAGCCGCAGGCCACCTAACACNGACNAACCAAAGCGGGGAACACTATAAANCNAAACCCCNACCCCGANCCAACCAGAAAGGGAAGACGAAAAAAAGAAAGCAGAACGAANGANACTAAAAACGCAAAAC] consensusID : consensus_8403#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1172 fasta sequence [GCACATGTCTGCCTTGTTNNATATGATTGGCGATGCTGTTACAGAATAGTTTATTTACACGCTGAATAACATTTTTAACGAATCAACACATTTGATGAAATCAGCATAATTGCACATCCGAATGCAACAGCTATACCTACGGAATAGGCAACAGCTCCACCACCGGGTGGCTGCGCAGTAGTTCCCTCATAGTCCTGGTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTGTTCGGCTTTCACAAGGGCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTCCGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGTGTATTGATACGATTGCCCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAAGTACTGCAATGCGGCTTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGATAGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCGTGAGGTAATATTCCATAATAG-TTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAA-ATAAATCGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTTGTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACAGCTTTATTGGCTAGTGCGTGCGCGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGATGTAGTCGGCTGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCTGTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGATCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCCAGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGCAAGGTTGGCCACATCGTCTACTAGCTGTGCTCGATTGATTACGGGTAGCTGATCCTCAAACTGTTCACTATTTAGTACCTCAATCAGCGG] [+] EMBL BX466691 [GCACATGTCTGCCTTGTTNNATATGATTGGCGATGCTGTTACAGAATAGTTTATTTACACGCTGAATAACATTTTTAACGAATCAACACATTTGATGAAATCAGCATAATTGCACATCCGAATGCAACAGCTATACCTACGGAATAGGCAACAGCTCCACCACCGGGTGGCTGCGCAGTAGTTCCCTCATAGTCCTGGTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTGTTCGGCTTTCACAAGGGCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTCCGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGTGTATTGATACGATTGCCCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAAGTACTGTAATGCGGCTTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGATAGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCGTGAGGTAATATTCCATAATAGTTTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTNCAACATAAATCG ] [+] EMBL CNS08TR5 [ GCTGCGCAGTAGTTCCCTCATAGTCCTGCTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTGTTCGGCTTTCACAAGGGCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTCCGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGCGTATTGATACGATTGCCCAACTCAGTAAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAACTACTGC ] [-] EMBL BX624190 [ ATCGTGTATTGATACGATTGCCCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCTCGTACAAGTACTGCAATGCGGCCTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGATAGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCGTGAGGTAATATTCCATAATAG TTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAA ATAAATCGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTTGTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACAGCTTTATTGGCTAGTGCGTGCGCGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGATGTAGTCGGCTGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCTGTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGATCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCCAGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGC ] [-] EMBL BM600964 [ CATAATAG TTTCGTTACGAGCGCATCCCACGCTAGCCAGGAACCGGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAA ATAAATCGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTTGTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACGGCTTTATTAGCTAGTGCGTGCGCGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGATGTAGTCGGCTGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCTGTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGATCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCCAGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGCAAGGTTGGCCACATCGTCTACTAGCTGTGCTCGATTGATTACGGGTAGCTGATCCTCAAACTGTTCACTATTTAGTACCTCAATCAGCGG] consensusID : consensus_8403#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 970 fasta sequence [TGTATACCAGCATTGAAAAGTTCCGTACAGTCGATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAACACTCACTGTATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCCAAAACATGTTGTTTTATATTCCCGTGAACTACGGCTCCAATGTACCCACGTCGACCGACTTTGAAGATACAACGCCTACATTCTGGGTGACACCACAGGATCCTACGGCAACCGTTTTCCTTGAGGCGGGAGTCGAATGGGTCGTAGTCAACAAACAGCAGACGGGGTACTATCGTGTGAACTACGACGATGAAAGCTGGCATAATTTTTTTGAGGTACTAAATAGTGATCAGTTTGAGGATCAGCTGCCCGTAATCAATCGAGCACAGCTAGTAGATGATGTGGCCAACCTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATCTGGAGCGTGAAACGGAATACATCCCATGGGCCACGGCGTACAATGCGTTGCAACATCTAGATCGAATGTTCTCTAGCCACAAAGAATACAATCGATTCGAGAACTATGTAGGAATGTTAGCCTCGCATGTGTTTAACGAAATGAATCTATTTGATACTGAAAGCCATCTGAATCGTTTACATCGTGACAAGTCCGTTTACTTGGCGTGTTATTTCGGTGTTGAGGCGTGCTTGGATGCTGCAACTAAAATAATAGAAGAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACGCCGTCTTTTGTGCATTGCACAAATATGATCTGCTCGTTGAAGGAGACTATGGCTTGGAGATTTTCCAAAAATACTGGCTAGCGACAGATCAATACCAGCCGTTGATGGATAAGTTTATTAATGCGTTGGGATCCAG] [-] EMBL CNS08TOC [TGTATACCAGCATTGAAAAGTTCCGTACAGTCGATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAACACTCACTGTATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCCAAAACATGTTGTTTTATATTCCCGTGAACTACGGCTCCAATGTACCCACGTCGACCGACTTTGAAGATACAACGCCTACATTCTGGGTGACACCACAGGATCCTACGGCAACCGTTTTCCTTGAGGCGGGAGTCGAATGGGTCGTAGTCAACAAACAGCAGACGGGGTACTATCGTGTGAACTACGACGATGAAAGCTGGCATAATTTTTTTGAGGTACTAAATAGTGATCAGTTTGAGGATCAGCTGCCCGTAATCAATCGAGCACAGCTAGTAGATGATGTGGCCAACCTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATCTGGAGCGTGAAACGGAATACATCCCATGGGCCACGGCGTACAATGCGTTGCAACATCTAGATCGAATGTTCTCTAGCCACAAAGAATACAATCGATTCGAGAACTATGTAGGAATGTTAGCCTCGCATGTGTTTAACGAAATGAATCTATTTGATACTGAAAGCCATCTGAATCGTTTACATCGTGACAAGTCCGTTTACTTGGCGTGTTATTTCGGTGTTGAGGCGTGCTTGGATGCTGCAACTAAAATAATAGAAGAAGCACTTGCCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACGCCGTCTTTTGTGCATTGCACAAATATGATCTGCTCGTTGAAGGAGACTATGGCTTGGAGATTTTCCAAAAATACTGGCTAGCGACAGATCAATACCAGCCGTTGATGGATAAGTTTATTAATGCGTTGGGATCCAG] consensusID : consensus_8403#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 955 fasta sequence [CAGATACCGCGTTTATCAGTTTGAGGATCAGCTGCCCGTATTAATCGATAACAGTAGTAGATAGATGTGGCCAACGTATGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATACTAGGAGCGTGAAACGGAATACATACCATGGGCCACGGGCGTACAATAGCGTATGCAACATACTAGATCGAATGTTCTCTAGCCACAAAGAATACAATACGATTCGAGAACTATGTAGGAATGTTAGCCTACGCATGTGTTTAACGAAATGCACTCTATTCTGNCTACTGAAAGCCATCTGAATCGTATCTACATCGTGACNAAGTCCGTNTTACTTGGCAGTAGTAAATAACAGGTGTATGAGGCGTGCTTTGGCATTGCTTGCAACTAACACATAATAGAAGAAGACACCTTGCCGCAGGCAAACGTTAAACATTCCCANAAGGAATTGCAACAACGCCGNCTTATTATGGTGCACTTGCACAAACACTACTGATCCTGCCTCGCTCTGCAGGAGACCTATNGGCCTNTGGCAGAATANATCCCCACACAACTACCTTGGCTAAANCGACCAAGATTCCAACTAACCACAGCCCCGCNGCCTGGGACTAACGNACAATNTAACTGCCGTTATGAGGANTGAACCCCGCCAACATCCTGGGCCANGACAACCGGAACTTTATCTTAAANACTTAACCAACACCTTGCTATGAAACAATNACACCTAAAAAAACCCGCANGCCATTACCCCNAACTACACCAGCTGTAACCNCCTTNANCCCACACTTCANCCATCTTCCCNTACACCCAACACTTGCATTTACAACCAGAAAGGNTACCGCGCACCAACCACACAGCAAACTTNTCANCAACNCTNCCANCCNNCTCTCATCACTNCTCCCACCCNCCGCCCACNCCCCTCCCNCCACANACGCNCCCACCNT] [+] EMBL AL694953 [CAGATACCGCGTTTATCAGTTTGAGGATCAGCTGCCCGTATTAATCGATAACAGTAGTAGATAGATGTGGCCAACGTATGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGTATACTAGGAGCGTGAAACGGAATACATACCATGGGCCACGGGCGTACAATAGCGTATGCAACATACTAGATCGAATGTTCTCTAGCCACAAAGAATACAATACGATTCGAGAACTATGTAGGAATGTTAGCCTACGCATGTGTTTAACGAAATGCACTCTATTCTGNCTACTGAAAGCCATCTGAATCGTATCTACATCGTGACNAAGTCCGTNTTACTTGGCAGTAGTAAATAACAGGTGTATGAGGCGTGCTTTGGCATTGCTTGCAACTAACACATAATAGAAGAAGACACCTTGCCGCAGGCAAACGTTAAACATTCCCANAAGGAATTGCAACAACGCCGNCTTATTATGGTGCACTTGCACAAACACTACTGATCCTGCCTCGCTCTGCAGGAGACCTATNGGCCTNTGGCAGAATANATCCCCACACAACTACCTTGGCTAAANCGACCAAGATTCCAACTAACCACAGCCCCGCNGCCTGGGACTAACGNACAATNTAACTGCCGTTATGAGGANTGAACCCCGCCAACATCCTGGGCCANGACAACCGGAACTTTATCTTAAANACTTAACCAACACCTTGCTATGAAACAATNACACCTAAAAAAACCCGCANGCCATTACCCCNAACTACACCAGCTGTAACCNCCTTNANCCCACACTTCANCCATCTTCCCNTACACCCAACACTTGCATTTACAACCAGAAAGGNTACCGCGCACCAACCACACAGCAAACTTNTCANCAACNCTNCCANCCNNCTCTCATCACTNCTCCCACCCNCCGCCCACNCCCCTCCCNCCACANACGCNCCCACCNT] consensusID : consensus_8403#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 673 fasta sequence [CCGGATTTAGAGTGTTTGCTGCAGAAAGCAAGGTAGCTCACACTGGGTATGCGTTGGAGTTTCTTGGCAATTCGTTACGTACACTCGAAAACTTTTTTGGACGCCAGTATCAGCTGCCGAAAGTAGATCTCATCGCTATTCCCGATTTTGCGATGGGCGCCATGGAGAACTGGGGCCTGATAACGTTTCGGGAGCAGTACTTAATCTATGAGGAAGGTGTAACGACAGCCCGTACGAAGCAAAACATTGCTGATCTCATTACGCACGAGCTAACGCACATGTGGTTCGGTAACGAGGTTACTCCCGAGTGGTGGACGTACTTATGGTTGAGCGAAGGCTTTGCTAGATACTTTGAATACTACATAACATCACAGCTCGAGCCTACCTGGAACCTCTGGCAGCAGTTCATCGTGAACAATGTCCACTCGGCGCTGTCACAAGACTGTAACAGCAACAATCGAATGATGAGTTACTATGCAACGGATCCGGCGGTACTAAATGACCTGTTTGATTACGTCGTGTACGCAAAGAGTGCTTCCGTTATACGGATGATACAGAACGTGATTGGGTTTGATACCTTCAGGCAGTCTCTTAACGATTACTTACGATCACGAAGTTATCTCACAACGAGGCCGCAGTATCTGTATACCAGCATTGAAAAGTTCCGCACAGT] [+] EMBL BM625546 [CCGGATTTAGAGTGTTTGCTGCAGAAAGCAAGGTAGCTCACACTGGGTATGCGTTGGAGTTTCTTGGCAATTCGTTACGTACACTCGAAAACTTTTTTGGACGCCAGTATCAGCTGCCGAAAGTAGATCTCATCGCTATTCCCGATTTTGCGATGGGCGCCATGGAGAACTGGGGCCTGATAACGTTTCGGGAGCAGTACTTAATCTATGAGGAAGGTGTAACGACAGCCCGTACGAAGCAAAACATTGCTGATCTCATTACGCACGAGCTAACGCACATGTGGTTCGGTAACGAGGTTACTCCCGAGTGGTGGACGTACTTATGGTTGAGCGAAGGCTTTGCTAGATACTTTGAATACTACATAACATCACAGCTCGAGCCTACCTGGAACCTCTGGCAGCAGTTCATCGTGAACAATGTCCACTCGGCGCTGTCACAAGACTGTAACAGCAACAATCGAATGATGAGTTACTATGCAACGGATCCGGCGGTACTAAATGACCTGTTTGATTACGTCGTGTACGCAAAGAGTGCTTCCGTTATACGGATGATACAGAACGTGATTGGGTTTGATACCTTCAGGCAGTCTCTTAACGATTACTTACGATCACGAAGTTATCTCACAACGAGGCCGCAGTATCTGTATACCAGCATTGAAAAGTTCCGCACAGT] consensusID : consensus_8403#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence [AGTAATCTGGTAATATCCCACGATTGGAAAAAAGGTTCCCGGTACAGTCGAATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAAAACAACATTCCAAACTGGNATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCAAAACATGTTGTTTATATTCCCGTGAACTACGGGTCCAATGTACCCACGTCGACCGATTTGAAATACAACGCCTACATTCTGGGCTGAACCGGAGGATCCTACGGAACGTGACCCTNGAGGCGGG] [+] EMBL AL932298 [AGTAATCTGGTAATATCCCACGATTGGAAAAAAGGTTCCCGGTACAGTCGAATCTTCCGGCCAGTGTTGAGGTCATCTTCGAAAGCTGGGCCAATACGCCAGGCTATCCCGTTGTAACGGTGTCCATCGATCGTACCACACGAAAACAACATTCCAAACTGGNATCTCAGAAGCGCTTTTGGATGCCGAACGAGATCGATACGCCACCCAAAACATGTTGTTTATATTCCCGTGAACTACGGGTCCAATGTACCCACGTCGACCGATTTGAAATACAACGCCTACATTCTGGGCTGAACCGGAGGATCCTACGGAACGTGACCCTNGAGGCGGG] consensusID : consensus_8403#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 221 fasta sequence [CACGAATTCGGCACGAGGTGTAGCCGTTAATCAATCGAGCACAGCTAGTAGACGATGTGGGCAACTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGGTATCTTGGAGGCCGTGACAACGGAATACATCCCATGGGACACGGGCGTACAAATGCGTTGCAACATCTAGATCCGGAATGTTCTCTAGCGCNAGCAAAGAATACA] [+] EMBL BX469666 [CACGAATTCGGCACGAGGTGTAGCCGTTAATCAATCGAGCACAGCTAGTAGACGATGTGGGCAACTTGCTCGGGCAGGTGAAGTGGGATACGATGTAGCACTGTCCCTGATGCAGGTATCTTGGAGGCCGTGACAACGGAATACATCCCATGGGACACGGGCGTACAAATGCGTTGCAACATCTAGATCCGGAATGTTCTCTAGCGCNAGCAAAGAATACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8403#2 ------------------------------------------------------------ consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ------------------------------------------------------------ consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 TGCAGCAGATAGCCCAGGCTTATTGAGATGCTGCAACTAAAANAATAGAATAAGCACTTG 60 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 ------------------------------------------------------------ consensus_8403#2 ------------------------------------------------------------ consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ------------------------------------------------------------ consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACTGCCGTCTTTATGTAGCATATG 120 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 ------------------------------------------------------------ consensus_8403#2 ------------------------------------------------------------ consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ------------------------------------------------------------ consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CACAAATATAGATCTTGCTCGTTGCAAGTGAGACTATGGCTATGGAGATATTCCAAAAAT 180 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 ---------------------------------------------GCACATGTCTGCCTT 15 consensus_8403#2 ------------------------------------------------------------ consensus_8403#5 -----------------------------------------------------AGTAATC 7 consensus_8403#3 ---------------------------------------------------------CAG 3 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 ACTNAGGCTTAGCTGACATGATCANATNACCCAGCCCGTTGCATAGTGATAACNGGTCTT 240 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 GTTNNATATGATTGGCGATGCTGTTACAGAATAGTTTATTTACACGCTGAATAACATTTT 75 consensus_8403#2 ----TGTATACCAGCATTGAAAA----GTTCC--GTA-CAG--TCGA--TCTTCCGGCCA 45 consensus_8403#5 TGGTAATATCCCACGATTGGAAAAAAGGTTCCCGGTA-CAG--TCGAA-TCTTCCGGCCA 63 consensus_8403#3 ATACCGCGTTTATCAGTTTGAGGATCAGCTGCCCGTATTAA--TCGATAACAG-TAGTAG 60 consensus_8403#6 ----CACGAAT-TCGGCACGAGGTGTAGCCGTT--AATCAA--TCGAGCACAGCTAGTAG 51 consensus_8403#0 ATATCAACTTGGCGTACTGGGNGATTAGTNCCCCGNA-AAT--CCTTCCCCATTGNAACN 297 consensus_8403#4 ----------CCGGATTTAGAGTGTTTGCTGCAGAAAGCAAGGTAGCTCACACTGGGTAT 50 consensus_8403#1 TAACGAATCAACACATTTGATGAAATCAGCATAATTG-CACATCCGAATGCAACAGCTAT 134 * * consensus_8403#2 GT-GTTGAGGTCATCTT---CGAAAGCTG-GGCCAATACGCCAGGCTATCCCGTTGTAAC 100 consensus_8403#5 GT-GTTGAGGTCATCTT---CGAAAGCTG-GGCCAATACGCCAGGCTATCCCGTTGTAAC 118 consensus_8403#3 ATAGATGTGGCCAACGTATGCTCGGGCAG-GTGAAGTGGGATACGATGTAGCACTGTCCC 119 consensus_8403#6 AC-GATGTGGGCAACTT--GCTCGGGCAG-GTGAAGTGGGATACGATGTAGCACTGTCCC 107 consensus_8403#0 GNAGNTNTACTCAATACCTAACCACAAAG-TTGGAATNT-ACACCCTGTGGCATGGTCCC 355 consensus_8403#4 GC-GTTGGAGTTTCTTGGCAATTCGTTAC-GTACACTCGAAAACTTTTT----TGGACGC 104 consensus_8403#1 ACCTACGGAATAGGCAACAGCTCCACCACCGGGTGGCTGCGCAGTAGTTCCCTCATAGTC 194 * * * consensus_8403#2 -GGTGTCCATCGATCGTACCACACGAA----------CACTC---ACTG-TATCTCAGAA 145 consensus_8403#5 -GGTGTCCATCGATCGTACCACACGAAAACAA-----CATTCCAAACTGGNATCTCAGAA 172 consensus_8403#3 TGATGCAG-TATACTAGGAGC-GTGA-AACGG-----AATACATACCATGGGCCACGGGC 171 consensus_8403#6 TGATGCAGGTATCTTGGAGGCCGTGACAACGG-----AATACATCCCATGGGACACGGGC 162 consensus_8403#0 CTG-GCAACCCACGGGCACGCCTNGACCACGGCCAGGGGTATCCCCCGGGNAGTAACGTG 414 consensus_8403#4 CAGTATCAGCTGCCGAAAGTAGATCTCATCGCTATTCCCGATTTTGCGATGGGCGCCATG 164 consensus_8403#1 CTGGTCCACCAACCAGGAAGTGATGCTTTCAGCGTGTTTCTCTATCCAGCGAATGTTTTG 254 * consensus_8403#2 GCGCTTTTGGATGCCG-AACGAGATCGATACGCCACCCCAA-AACATGTTGTTTTATATT 203 consensus_8403#5 GCGCTTTTGGATGCCG-AACGAGATCGATACGCCACCC-AA-AACATGTTGTTT-ATATT 228 consensus_8403#3 GTACAATAGCGTATGC-AACATACTAGATC--GAATGTTCT-CTAGCC---ACAAAGAAT 224 consensus_8403#6 GTACAAATGCGT-TGC-AACAT-CTAGATCCGGAATGTTCT-CTAGCGCNAGCAAAGAAT 218 consensus_8403#0 GGANTAAAAGGNCTTG-GCCACANCAGCGAANCAATCCCCG-ACTAACCACGGGGGCGNC 472 consensus_8403#4 GAGAACTGGGGCCTGATAACGTTTCGGGAGCAGTACTTAAT-CTATGAGGAAGGTGTAAC 223 consensus_8403#1 TTCGGCTTTCACAAGG-GCTGCATCTGCGGCGGCTTTCGCTGCCGTTGTTAACATGTGTC 313 * consensus_8403#2 CCCGTGAA-CTACGGCTCCAATGTACCCACGTCGACCGACTTTGAAGATACAACGCCTAC 262 consensus_8403#5 CCCGTGAA-CTACGGGTCCAATGTACCCACGTCGACCGATTT--GAAATACAACGCCTAC 285 consensus_8403#3 ACAATACG-ATTCGAGAACTATGTAGGAATGTTAGCCTACGCATGTGTTTAACGAAATGC 283 consensus_8403#6 ACA--------------------------------------------------------- 221 consensus_8403#0 CGTAACCA-NAACAACGACCAACTTGGCNCCTCCANAAACGTCCGACATTGGNAAGNACC 531 consensus_8403#4 GACAGCCC-GTACGAAGCAAAACATTGCTGATCTCATTACGCACGAGCTAACGCACATGT 282 consensus_8403#1 CGTACTCGTCCACAATGTTTTTAAGCACTTCGTGCTGTAATCGTGTATTGATACGATTGC 373 consensus_8403#2 ATTCTGGGTGACAC-CACAGGATCCTACGGCAACCGTTTTCCTTGAGGCGGGAGTCGAAT 321 consensus_8403#5 ATTCTGGGCTGAAC-CGGAGGATCCTACGG--AACGTGACCCTNGAGGCGGG-------- 334 consensus_8403#3 ACTCTATTCTGNCTACTGAAAGCCATCTGAATCGTATCTACATCGTGACNAAGTCCGTNT 343 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CAACACAACCNGACGNCCCGCACGCATGGCCTAGCGCAACAACGCCGGGACCAACCATAN 591 consensus_8403#4 GGT-TCGGTAACGAGGTTACTCCCGAGTGGTGGACGTACTTATGGTTGAGCGAAGGCTTT 341 consensus_8403#1 CCAACTCAGTGAAGATCGGGGTCACGGAGGTCAGCAAGTATGTGACGGTCGAAAAATGCT 433 consensus_8403#2 GGGTCGTAGTCAACAAACAGCAGACGGGGTACTATCGTGTGAACTACGACGATGAAAGCT 381 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 TACTTGGCAGTAGTAAATAACAGGTGTATGAGGCGTGCTTTGGCATTGCTTGCAACTAAC 403 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 GGNAGANCAACGAGAAACC-CANGGCCNTGACTACACAACCACCCTTCCCGTTACCCCCC 650 consensus_8403#4 GCTAGATACTTTGAATACTACA----TAACATCACAGCTCGAGCCTACCTGGAACCTCTG 397 consensus_8403#1 CGTACAAGTACTGCAATGCGGCTTGGCGCGTTCCAGGGCTACCGTTGATTAGCCCGAGAT 493 consensus_8403#2 GGCATAATTTTTTTGAGGTACTAAATAGTGATCAGTTTGAGGATCAGCTGCCCGTAATCA 441 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ACATAATAGAAGAAGACACCTTGCCGCAGGCAAACGTTAAACATTCCCANAAGGAATTGC 463 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CACAACGCGCACACNAAAGACTAACCACGAACAGCACACTGGGCCNTCCTGGCACCNACG 710 consensus_8403#4 GCAGCAGTTCATCGTGAACAATGTC---------CACTCGGCGCTGTCACAAGACTGT-- 446 consensus_8403#1 AGATTTGACTCCTTTGTCCGGCCGTCACGGGAAGCCCCGGATAATTGTATGCCGAAAGCG 553 consensus_8403#2 ATCGAGCACAGCTAGTAGATGATGTGGCCAACCTTGCTCGGGCAGGTGAAGTGGGATACG 501 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 AACAACGCCGNCTTATTATGGTGCACTTGCACAAACACTACTGATCCTGCCTCGCTCTGC 523 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 AAAGCACAGGNCTGACCAATGTACACCTCCCATNNAAACCTCAACCCAANCACAAAAANC 770 consensus_8403#4 AACAGCAACAATCGAATGATGAGTTACTATGCAACGGAT-CCGGCGGTACTAAATGACCT 505 consensus_8403#1 TGAGGTAATATTCCATAATAGTTTCGTTACGAGCGCATC--CCACGCTAGC-CAGGAACC 610 consensus_8403#2 ATGTAGCACTGTCCCTGATGCAGTATCTGGAGCGTGAAACGGAATACATCCCATGGGCCA 561 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 AGGAGACCTATNGGCCTNTGGCAGAATANATCCCCACACAACTACCTTGGCTAAANCGAC 583 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 ANCCGATTACCCCCTCAATATAGCGACAAAACNGCACGCCNAATCAACAANTAACCCGAN 830 consensus_8403#4 GTTTGATTACGTCGTGTACGCAAAGAGTGCTTCCGTTATACGGATGATACAGAACGTGAT 565 consensus_8403#1 GGTTAATCATATCCAAATCCTCGGGACTGTTGGCTGATGTCACATATTTTTCAAATAAAT 670 consensus_8403#2 CGGCGTACAATGCGTTGCAACATCTAGATCGAATGTTCTCTAGCCACAAAGAATACAATC 621 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 CAAGATTCCAACTAACCACAGCCCCGCNGCCTGGGACTAACGNACAATNTAACTGCCGTT 643 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CAACCAAAGACCCACCCAGNGAGCCCCACAGCGCCAAAANTAAACNANNAAGGACTACCC 890 consensus_8403#4 TGGGTTTGATACCTTCAGGCAGTCTCTTAACGATTACTTACGATCACGAAGTTATCTCAC 625 consensus_8403#1 CGGTCTGGACGTTGAGTGTTGCGCTTGGATACTTGTGCAAAGCACAGAACACTGACGCTT 730 consensus_8403#2 GATTCGAGAACTATGTA-GGAATGTTAGCCTCGCATGTGTTTAACGAAATGAATCTATTT 680 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ATGAGGANTGAACCCCG-CCAACATCCTGGGCCANGACAACCGGAACTTTATCTTAAANA 702 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CAATGGGGCACAACCAC-AGAGGCACCACNGCCAAANCGGACAACACATGATGCCCTNAG 949 consensus_8403#4 AACGAGGCCGCAGTATC-TGTATACCAGCATTGAAAA-GTTCCGCACAGT---------- 673 consensus_8403#1 GTACTTCTTCAGGTATGGTGAACGATGAATCCTGGACAGCTTTATTGGCTAGTGCGTGCG 790 consensus_8403#2 GATACTGAAAGCCA-----TCTGAATCGTTTACATCGTGACAAGTCCGTTTACTTGGCGT 735 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 CTTAACCAACACCT-----TGCTATGAAACAATNACACCTAAAAAAACCCGCANGCCATT 757 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 GGGAGCAGACCTCNGGGGCNACTAGGGNACNGGAGCCACCCCGAACACCCCCAGGGAGGC 1009 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 CGTCATCCAAACATTTCTTCACGCCAGAGTAGCATGCTAAGTACACGGTATTCCCGCGAT 850 consensus_8403#2 GTTATTTCGGTGTTGAGGCGTGCTTGGATGCTGCAACTAAAATAATAGAAGAAGCACTTG 795 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ACCCCNAACTACACCAGCTGTAACCNCCTTNANCCCACACTTCANCCATCTTCCCNTACA 817 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CNANCGANCGACACACAANG-GGCCGGCAAAACACAAAACCNGGAGNGCACAACCACAGC 1068 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 GTAGTCGGC-TGATTTGATCCATCGGGCCAGTTAGTAGAATGTTTTCATACATGCAACCT 909 consensus_8403#2 CCGAGGAAACGTTAAACATTCCCAAAGAATTGCAAAACGCCGTCTTTTGTGCATTGCACA 855 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 CCCAACACTTGCATTTACAACCAGAAAGGNTACCGCGCACCAACCACACAGCAAACTTNT 877 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CATAAGGGCCCAGGACCCAACCAACAACGGAACANAACCCGGAANAAAANNGGCATNGAA 1128 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 GTGATGGTACGTAGGAAAGTTTCAAACCGACTGTATTCTTCGTGGCTAGAGAACATCCGA 969 consensus_8403#2 AATATGATCTGCTCGTTGAAGGAGACTATGGCTTGGAGATTTTCCAAAAATACTGGCTAG 915 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 CANCAACNCTNCCANCCNNCTCTCATCACTNCTCCCACCCNCCGCCCACNCCCCTCCCNC 937 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 AAACAACAACACCCCACAACCANAGCCCAGCACCGCACACGGCCAGAGGGCACGGCCGAA 1188 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 TCTAGATGTAGCAACGCATTGTACGCCGTGGCCCATGGGATGTATTCCGTTTCACGCTCC 1029 consensus_8403#2 CGACAGATCAATACCAGCCGTTGATGGATAAGTTTATTAATGCGTTGGGATCCAG----- 970 consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 CACANACGCNCCCACCNT------------------------------------------ 955 consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CGNANCGCCGGCCACACNCANAACNACACCNAACAANCANGGCAAANCACGCACAGGGAG 1248 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 AGATACTGCATCAGGGACAGTGCTACATCGTATCCCACTTCACCTGCCCGAGCAAGGTTG 1089 consensus_8403#2 ------------------------------------------------------------ consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ------------------------------------------------------------ consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 CAGAACNGAGCCGCAGGCCACCTAACACNGACNAACCAAAGCGGGGAACACTATAAANCN 1308 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 GCCACATCGTCTACTAGCTGTGCTCGATTGATTACGGGTAGCTGATCCTCAAACTGTTCA 1149 consensus_8403#2 ------------------------------------------------------------ consensus_8403#5 ------------------------------------------------------------ consensus_8403#3 ------------------------------------------------------------ consensus_8403#6 ------------------------------------------------------------ consensus_8403#0 AAACCCCNACCCCGANCCAACCAGAAAGGGAAGACGAAAAAAAGAAAGCAGAACGAANGA 1368 consensus_8403#4 ------------------------------------------------------------ consensus_8403#1 CTATTTAGTACCTCAATCAGCGG------------------------------------- 1172 consensus_8403#2 ----------------- consensus_8403#5 ----------------- consensus_8403#3 ----------------- consensus_8403#6 ----------------- consensus_8403#0 NACTAAAAACGCAAAAC 1385 consensus_8403#4 ----------------- consensus_8403#1 ----------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||