cluster # 8423

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Anopheles gambiae
cluster # 8423 cluster # 8423 Sequences # 10 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8423#0 length = 711 sequences # 3
consensus_8423#1 length = 703 sequences # 1
consensus_8423#2 length = 698 sequences # 1

consensus_8423#3 length = 678 sequences # 1
consensus_8423#4 length = 610 sequences # 1
consensus_8423#5 length = 549 sequences # 2
consensus_8423#6 length = 503 sequences # 1

consensusID : consensus_8423#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 711
fasta sequence

                              [CCGACAGTTCGCAAGTAGGAGAAACGTTCAGCGGCGAAGCGTCGGGCTTTTGATTGCTGATTTACATTCCGAAACAAATAGATAACTGCAACCTGTGAAAAAGATTGAAAACTGCAGTGAAAGAGCAAGGGCATCGTTTCGATCTCTATCGTGTTGTCGTGTTTAGTGTGTTTCGGCAGAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAG-G-GTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAAGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGCG]

[+] EMBL BM605609             [CCGACAGTTCGCAAGTAGGAGAAACGTTCAGCGGCGAAGCGTCGGGCTTTTGATTGCTGATTTACATTCCGAAACAAATAGATAACTGCAACCTGTGAAAAAGATTGAAAACTGCAGTGAAAAGGCAAGGGCATCGTTTCGATCTCTATCGTGCTGTCGTGCTTAGTGTGTGTCTGCAGAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAG G GTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAAGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGA                                                          ]
[+] EMBL BM597856             [                                ccgGAAGCGTCGGGCTTTTGATTGCTGATTTACATTCCGAAACAAATAGATAACTGTAACCTGCGAAAAAGATTGAAAACTGCAGTGAAAGAGCAAGGGCATCGTTTCGATCTCTATCGTGTTGTCGTGTTTAGTGTGTTTCGGCCGAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAG G GTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGCG]
[+] EMBL CNS08CHK             [                                   ttgaCGTCGGGCTTTTGATTGCTGATTTACATTCCGAAACAAATAGATAACTGCAACCTGTGAAAAAGATTGAAAACTGCAGTGAAAGAGCAAGGGCATCGTTTCGATCTCTATCGTGTTGTCGTGTTTAGTGTGTTTCGGCAGAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGTGTGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGTAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGC                                                                                                                                                                                                                                                                                ]




>consensus_8423#0
CCGACAGTTCGCAAGTAGGAGAAACGTTCAGCGGCGAAGCGTCGGGCTTTTGATTGCTGA
TTTACATTCCGAAACAAATAGATAACTGCAACCTGTGAAAAAGATTGAAAACTGCAGTGA
AAGAGCAAGGGCATCGTTTCGATCTCTATCGTGTTGTCGTGTTTAGTGTGTTTCGGCAGA
AAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAAT
GGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTA
ATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCT
GCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCT
GTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATA
CTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAA
AAGGACATCCGCGAAGACGGCGAACATGCGATAGAAGTTGAAGAAAGCTGTCCATTGTTC
AAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTA
GGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGCG

consensusID : consensus_8423#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 703
fasta sequence

                              [CCGTAGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGAGGAGTGTGGTGATTCGGTTTGAGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAGAAAACGGAGCACTCCGGATCCGGCCATCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTTTTTCGTGTAAATACTGCACTCCAGTGTGCGTCGCCTGCCAGATGTACTGCTGCTGGGATAAAAAGCTTTTCTCGCAGAATGCACCTCCCTATCATCGTTTCGAAAGACGGCAACACAACAGATTCTAGTCCAGTGTCCGCTACTGATTGTTTCTGTTGTGTCCGTGCATGTCCATTATGCGCGTGTTGTCGTATTCGCCTTTCGTGCACTTTCCATATCATTGCCCTGTATTGTTGCCGCTCACCTTCACTGCATGCGCATTGCACTGCAACTCTTCGGCATACTAGATGGTCACGGTGACCTTAAAGAACGGTATAGGGCTGCTGAAAAAATCATACTTTTAGTGTTTTCGGCTAATGCTCGTGGGACGCTTTGCTTAATTGGCTGGTGTGTCATCTGACGTTGTGTGTAAAAAGCGAGTATTTTTGCACGGTGCAAAAATACTGTTGTCATCGGGAAAAGTGCCGAGAAAAGCTGCTCCCCATAACCTAGAAAGTGTAGCATTGGTAAGCTGTTGTTTTGGAACGGCGGCC]

[+] EMBL BM606700             [CCGTAGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGAGGAGTGTGGTGATTCGGTTTGAGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAGAAAACGGAGCACTCCGGATCCGGCCATCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTTTTTCGTGTAAATACTGCACTCCAGTGTGCGTCGCCTGCCAGATGTACTGCTGCTGGGATAAAAAGCTTTTCTCGCAGAATGCACCTCCCTATCATCGTTTCGAAAGACGGCAACACAACAGATTCTAGTCCAGTGTCCGCTACTGATTGTTTCTGTTGTGTCCGTGCATGTCCATTATGCGCGTGTTGTCGTATTCGCCTTTCGTGCACTTTCCATATCATTGCCCTGTATTGTTGCCGCTCACCTTCACTGCATGCGCATTGCACTGCAACTCTTCGGCATACTAGATGGTCACGGTGACCTTAAAGAACGGTATAGGGCTGCTGAAAAAATCATACTTTTAGTGTTTTCGGCTAATGCTCGTGGGACGCTTTGCTTAATTGGCTGGTGTGTCATCTGACGTTGTGTGTAAAAAGCGAGTATTTTTGCACGGTGCAAAAATACTGTTGTCATCGGGAAAAGTGCCGAGAAAAGCTGCTCCCCATAACCTAGAAAGTGTAGCATTGGTAAGCTGTTGTTTTGGAACGGCGGCC]




>consensus_8423#1
CCGTAGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGAGGAGTGTGGT
GATTCGGTTTGAGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAGAAAACGGAGC
ACTCCGGATCCGGCCATCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTTTTTCGTGTAA
ATACTGCACTCCAGTGTGCGTCGCCTGCCAGATGTACTGCTGCTGGGATAAAAAGCTTTT
CTCGCAGAATGCACCTCCCTATCATCGTTTCGAAAGACGGCAACACAACAGATTCTAGTC
CAGTGTCCGCTACTGATTGTTTCTGTTGTGTCCGTGCATGTCCATTATGCGCGTGTTGTC
GTATTCGCCTTTCGTGCACTTTCCATATCATTGCCCTGTATTGTTGCCGCTCACCTTCAC
TGCATGCGCATTGCACTGCAACTCTTCGGCATACTAGATGGTCACGGTGACCTTAAAGAA
CGGTATAGGGCTGCTGAAAAAATCATACTTTTAGTGTTTTCGGCTAATGCTCGTGGGACG
CTTTGCTTAATTGGCTGGTGTGTCATCTGACGTTGTGTGTAAAAAGCGAGTATTTTTGCA
CGGTGCAAAAATACTGTTGTCATCGGGAAAAGTGCCGAGAAAAGCTGCTCCCCATAACCT
AGAAAGTGTAGCATTGGTAAGCTGTTGTTTTGGAACGGCGGCC

consensusID : consensus_8423#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [CCGGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCTGAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGCGTAAAGTATTTGATCTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCTTCGTTGCCGCGGTTTACAACGAACAACTGCGTATTTACGGTGTGCAGTTTTCATCCGGAGGTTG]

[+] EMBL BM582712             [CCGGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCTGAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGCGTAAAGTATTTGATCTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCTTCGTTGCCGCGGTTTACAACGAACAACTGCGTATTTACGGTGTGCAGTTTTCATCCGGAGGTTG]




>consensus_8423#2
CCGGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCTGAAAGTGTAAA
AATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGCGTAAAGTATTTGATCTGC
TGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGG
TTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGAC
CGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTA
AAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTAC
GCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGT
ATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGAC
ATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGC
ATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGC
AAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCTTCGTTGCCGCGGTTTACAACGAACAA
CTGCGTATTTACGGTGTGCAGTTTTCATCCGGAGGTTG

consensusID : consensus_8423#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [CCGCCCACGCGTCCGATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGCGGTTTACAACGAACAACTGCGTATTTACGGTGTGCAGTTTCATCCGGAGGTTGACCTAACCGTGAACGGCAAACAGATGCTCTCTAATTTCCTGATGGACATTGCGGGTATGCAGCCGAACTTTACGATGCGTAATCGCGAAGAAGAATGCATTGCGTACATTAGAGAGCATGTGGGTAACAGTAAGGTGTTGCTGCTGGTAAGTGGTGGTGTGGATTCTACTGTTTGTGCAGCATTGCTAAGACATGTCTTAAAACCGGATCAAGTCATTGCCGTTCACATCGATAATGGTTTTATGCGCCTGAATGAGAGTGCGAATGTGGAAAAATCGTTGCGTGAGCTGGGGGGTCGATT]

[+] EMBL BM617605             [CCGCCCACGCGTCCGATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGCGGTTTACAACGAACAACTGCGTATTTACGGTGTGCAGTTTCATCCGGAGGTTGACCTAACCGTGAACGGCAAACAGATGCTCTCTAATTTCCTGATGGACATTGCGGGTATGCAGCCGAACTTTACGATGCGTAATCGCGAAGAAGAATGCATTGCGTACATTAGAGAGCATGTGGGTAACAGTAAGGTGTTGCTGCTGGTAAGTGGTGGTGTGGATTCTACTGTTTGTGCAGCATTGCTAAGACATGTCTTAAAACCGGATCAAGTCATTGCCGTTCACATCGATAATGGTTTTATGCGCCTGAATGAGAGTGCGAATGTGGAAAAATCGTTGCGTGAGCTGGGGGGTCGATT]




>consensus_8423#3
CCGCCCACGCGTCCGATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTA
TGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAAT
TATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACA
TGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGT
TTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTA
TTCCTCAAACCGCATCGTTGCCGCGGTTTACAACGAACAACTGCGTATTTACGGTGTGCA
GTTTCATCCGGAGGTTGACCTAACCGTGAACGGCAAACAGATGCTCTCTAATTTCCTGAT
GGACATTGCGGGTATGCAGCCGAACTTTACGATGCGTAATCGCGAAGAAGAATGCATTGC
GTACATTAGAGAGCATGTGGGTAACAGTAAGGTGTTGCTGCTGGTAAGTGGTGGTGTGGA
TTCTACTGTTTGTGCAGCATTGCTAAGACATGTCTTAAAACCGGATCAAGTCATTGCCGT
TCACATCGATAATGGTTTTATGCGCCTGAATGAGAGTGCGAATGTGGAAAAATCGTTGCG
TGAGCTGGGGGGTCGATT

consensusID : consensus_8423#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 610
fasta sequence

                              [CCGCAAATGACAGTGCGGAAGCGCCCATGACAGCTTGGTGTTGGTGTTGGAAATCATCGTCCGTGCAAAGTGAAAAAGAAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGC]

[+] EMBL BM617557             [CCGCAAATGACAGTGCGGAAGCGCCCATGACAGCTTGGTGTTGGTGTTGGAAATCATCGTCCGTGCAAAGTGAAAAAGAAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCATCGTTGCCGC]




>consensus_8423#4
CCGCAAATGACAGTGCGGAAGCGCCCATGACAGCTTGGTGTTGGTGTTGGAAATCATCGT
CCGTGCAAAGTGAAAAAGAAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAAT
CCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCG
GATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATA
TTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTA
TATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTT
TTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGT
TTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGACGGCGAACATGCGATAGAGGTTG
AAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCTCACTCACG
GCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTCAAACCGCA
TCGTTGCCGC

consensusID : consensus_8423#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 549
fasta sequence

                              [CCGCCCACGCGTCCGGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGAGGAGTGTGGTGATTCGGTTTGGGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAGAAAACGGAGCACTCCGGATCCGGCCGTCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTTTTTCGTTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGAC]

[+] EMBL BM608959             [CCGCCCACGCGTCCGGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGAGGAGTGTGGTGATTCGGTTTGGGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAGAAAACGGAGCACTCCGGATCCGGCCGTCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTTTTTCGTTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGAC]
[+] EMBL BM605409             [CCGCCCACGCGTCCGGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGAGGAGTGTGGTGATTCTGTTTGGGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAGAAAACGGAGCACTCCGGATCCGGCCGCCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTTTTTCGTTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGCACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCTAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGATAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAA                                          ]




>consensus_8423#5
CCGCCCACGCGTCCGGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGA
GGAGTGTGGTGATTCGGTTTGGGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAG
AAAACGGAGCACTCCGGATCCGGCCGTCGGAAGTTGTCGTGGATGTTCTTGCGTATCCTT
TTTCGTTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAG
AATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAG
GTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACA
TCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAAC
TCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCG
ATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAG
AAAAAGGAC

consensusID : consensus_8423#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 503
fasta sequence

                              [CCGGTTGGAAATCATCGTCCGTGCAAAGTGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCTGAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGCTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGAC]

[+] EMBL BM608504             [CCGGTTGGAAATCATCGTCCGTGCAAAGTGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCTGAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGCTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGGAGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAACATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTACAGAAAAAGGACATCCGCGAAGAC]




>consensus_8423#6
CCGGTTGGAAATCATCGTCCGTGCAAAGTGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTT
CTCAGCTGAACGGCTGAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATA
GCTGCAGCTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTAACGG
AGAATGGAGGGTTACATAATGACCGCGTGGCAATACTGGACGCCGGATCACAGTACGGGA
AGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTTACCTCTGGAAA
CATCTGCCTTAAAACTCAAAGAACTCGGCTACCGAGCAGTTGTTATATCCGGTGGACCCA
ACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCGATATTTTTAAGTTAGGCTTAC
CGATACTAGGTATTTGCTATGGAATGCAAATTATCAACAAAGAGTTTGATGGAACCGTAC
AGAAAAAGGACATCCGCGAAGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8423#0      CCGACAGTTCGCAAGTAGGAGAAACGTTCAGCGGCGAAGCGTCGGGCTTTTGATTGCTGA 60
consensus_8423#4      ------------------------------------------------------------
consensus_8423#2      ------------------------------------------------------------
consensus_8423#6      ---------------------------------------------CCGGTTGGAAATCAT 15
consensus_8423#3      -----------------------------------------------------CCGCCCA 7
consensus_8423#5      CCGCCCACGCGTCCGGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGA 60
consensus_8423#1      ----------CCGTAGCCTTTTTCGGTGTAGTGTGAAGCTCCATCCATCGATAGATAAGA 50
                                                                                  

consensus_8423#0      TTTACATTCCGAAACAAATAGATAACTGCAACCTGTGAAAAAGATTGAAAACTGCAGTGA 120
consensus_8423#4      --------------------------------------------CCGCAAATGACAGTGC 16
consensus_8423#2      -----------CCGGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCT 49
consensus_8423#6      CGTCCGTGCAAAGTGAAAAAGAAAAGGTTTTTGGTTTTGTTCTTTCTCAGCTGAACGGCT 75
consensus_8423#3      CGCGTCCGATCCGGTGGACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCC 67
consensus_8423#5      GGAGTGTGGTGATTCGGTTTGGGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAG 120
consensus_8423#1      GGAGTGTGGTGATTCGGTTTGAGGTAGTGTCGCGGTACAGGCGACTACGAAGAGGATAAG 110
                                                                                  

consensus_8423#0      AAGAGCAAGGGCATCGTTTCGATCTCTATCGTG----TTGTCGTGTTTAGTGTGTTTCG- 175
consensus_8423#4      GGAAGCGCCCATGACAGCTTGGTGTTGGTGTTGGAAATCATCGTCCGTGCAAAGTGAAA- 75
consensus_8423#2      GAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGCGTAAAGT 109
consensus_8423#6      GAAAGTGTAAAAATCGTGCAAATCGTTTTACTAGCCTGACGCATAGCTGCAGC------- 128
consensus_8423#3      GATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAAC 127
consensus_8423#5      AAAACGGAGCACTCCGGATC--CGGCCGTCGGAAGTTGTCGTGGATGTTCTTGCGTATCC 178
consensus_8423#1      AAAACGGAGCACTCCGGATC--CGGCCATCGGAAGTTGTCGTGGATGTTCTTGCGTATCC 168
                         *                        *                               

consensus_8423#0      GCAGAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTA--AC 233
consensus_8423#4      AAGAAAAGTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTA--AC 133
consensus_8423#2      ATTTGATCTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTA--AC 167
consensus_8423#6      --------TGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTA--AC 178
consensus_8423#3      AAAGAGTTTGATGGAACCGTACAGAAA-AAGGACATCCGCGAAGACGGCGAACATGCGAT 186
consensus_8423#5      TTTTTCGTTGCTGTAACGATAAAGACATGAGTGCATTGAACAAATCCACTGGCCTA--AC 236
consensus_8423#1      TTTT---TCGTGTAAATACTGCACTCCAGTGTGCGTCG--CCTGCCAGATGTACTGCTGC 223
                               *    **   *  *       *  * *         *        *     

consensus_8423#0      GGAGAATGGAGG--GTTACATAATGACCGCGTG---GCAATACTGGACGCCGGAT---CA 285
consensus_8423#4      GGAGAATGGAGG--GTTACATAATGACCGCGTG---GCAATACTGGACGCCGGAT---CA 185
consensus_8423#2      GGAGAATGGAGG--GTTACATAATGACCGCGTG---GCAATACTGGACGCCGGAT---CA 219
consensus_8423#6      GGAGAATGGAGG--GTTACATAATGACCGCGTG---GCAATACTGGACGCCGGAT---CA 230
consensus_8423#3      AGAGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGAAGGTTTTGCT 246
consensus_8423#5      GGAGAATGGAGG--GTTACATAATGACCGCGTG---GCAATACTGGACGCCGGAT---CA 288
consensus_8423#1      TGGGATAAAAAGC-TTTTCTCGCAGAATGCACC-------TCCCTATCATCGTTT---CG 272
                       * *     *      *       *                          *  *   * 

consensus_8423#0      CAGT-ACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTT 344
consensus_8423#4      CAGT-ACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTT 244
consensus_8423#2      CAGT-ACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTT 278
consensus_8423#6      CAGT-ACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTT 289
consensus_8423#3      CACTCACGGCGATAGTATCGATCGAGTAGGAAGCAAGCTGAAGGTGGGAGCTTATTCCTC 306
consensus_8423#5      CAGT-ACGGGAAGGTAATCGACCGAAAGGTGCGCGAACTCAATGTAAAATCAGATATTTT 347
consensus_8423#1      AAAG-ACGGCAACACAACAGATTCTA----GTCCAGTGTCCGCTACTGATTGTTTCTGTT 327
                       *   ****  *    *  **            *    *         *     *   * 

consensus_8423#0      ACCTCTGGAAACATCTGCCTTAAA--ACTCAAAGAACTCGGCTACCGAGCAGTTGTTATA 402
consensus_8423#4      ACCTCTGGAAACATCTGCCTTAAA--ACTCAAAGAACTCGGCTACCGAGCAGTTGTTATA 302
consensus_8423#2      ACCTCTGGAAACATCTGCCTTAAA--ACTCAAAGAACTCGGCTACCGAGCAGTTGTTATA 336
consensus_8423#6      ACCTCTGGAAACATCTGCCTTAAA--ACTCAAAGAACTCGGCTACCGAGCAGTTGTTATA 347
consensus_8423#3      AAACC--GCATCGT-TGCCGCGGT--TTACAACGAACA-----ACTGCGTATTTACGGTG 356
consensus_8423#5      ACCTCTGGAAACATCTGCCTTAAA--ACTCAAAGAACTCGGCTACCGAGCAGTTGTTATA 405
consensus_8423#1      GTGTCCGTGCATGTCCATTATGCGCGTGTTGTCGTATTCGCCTTTCGTGCACTTTCCATA 387
                          *        *                   * *          * * * **    * 

consensus_8423#0      TC------CGGTG--GACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCG 454
consensus_8423#4      TC------CGGTG--GACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCG 354
consensus_8423#2      TC------CGGTG--GACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCG 388
consensus_8423#6      TC------CGGTG--GACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCG 399
consensus_8423#3      TG------CAGTTTCATCCGGAGGTTGACCTAACCGTGAACG-GCAAACAGATGCTCTCT 409
consensus_8423#5      TC------CGGTG--GACCCAACTCTGTCTACGCCGAGGATGCGCCAAAGTATGATCCCG 457
consensus_8423#1      TCATTGCCCTGTATTGTTGCCGCTC-ACCTTCACTGCATGCGCATTGCACTGCAACTCTT 446
                      *       * **                *    * *     *                  

consensus_8423#0      ATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACA 514
consensus_8423#4      ATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACA 414
consensus_8423#2      ATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACA 448
consensus_8423#6      ATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACA 459
consensus_8423#3      A-ATTTCCTGATGGACATTGCGGGTATGCAGC-CGAACTTTACGATGCGTAATCGCGAAG 467
consensus_8423#5      ATATTTTTAAGTTAGGCTTACCGATACTAGGTATTTGCTATGGAATGCAAATTATCAACA 517
consensus_8423#1      CGGCATACTAGATGGTCACGGTGACCTTAAAGAACGGTATAGGGCTGCTGAAAA--AATC 504
                           *                *                      ***  *      *  

consensus_8423#0      AAGAGTTTGATG-GAACCGTACAGAAAAAG--GACATCCGCGAAG----ACGGCGAACAT 567
consensus_8423#4      AAGAGTTTGATG-GAACCGTACAGAAAAAG--GACATCCGCGAAG----ACGGCGAACAT 467
consensus_8423#2      AAGAGTTTGATG-GAACCGTACAGAAAAAG--GACATCCGCGAAG----ACGGCGAACAT 501
consensus_8423#6      AAGAGTTTGATG-GAACCGTACAGAAAAAG--GACATCCGCGAAG----AC--------- 503
consensus_8423#3      AAGAATGCATTGCGTACATTAGAGAGCATGTGGGTAACAGTAAGGTGTTGCTGCTGGTAA 527
consensus_8423#5      AAGAGTTTGATG-GAACCGTACAGAAAAAG--GAC------------------------- 549
consensus_8423#1      ATACTTTTAGTGTTTTCGGCTAATGCTCGTGGGACGCTTTGCTTAA---TTGGCTGGTGT 561
                      *    *    **    *     *         *                           

consensus_8423#0      GCGATAG-----AAGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGA 622
consensus_8423#4      GCGATAG-----AGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGA 522
consensus_8423#2      GCGATAG-----AGGTTGAAGAAAGCTGTCCATTGTTCAAACGCATGCAGCGTTCACAGA 556
consensus_8423#6      ------------------------------------------------------------
consensus_8423#3      GTGGTGGTGTGGATTCTACTGTTTGTGCAGCATTGCTAAGACATGTCTTAAAACCGGATC 587
consensus_8423#5      ------------------------------------------------------------
consensus_8423#1      GTCATCTGACGTTGTGTGTAAAAAGCGAGTATTTTTGCACG---GTGCAAAAATACTGTT 618
                                                                                  

consensus_8423#0      AGGTTTTGCTCACTCACGGCGATA---GTATCGATCGAGTAGGAAGCAAGCTGAAGGTGG 679
consensus_8423#4      AGGTTTTGCTCACTCACGGCGATA---GTATCGATCGAGTAGGAAGCAAGCTGAAGGTGG 579
consensus_8423#2      AGGTTTTGCTCACTCACGGCGATA---GTATCGATCGAGTAGGAAGCAAGCTGAAGGTGG 613
consensus_8423#6      ------------------------------------------------------------
consensus_8423#3      AAGTCATTGCCGTTCACATCGATAATGGTTTTATGCGCCTGAATGAGAGTGCGAATGTGG 647
consensus_8423#5      ------------------------------------------------------------
consensus_8423#1      GTCATCGGGAAAAGTGCCGAGAAAAGCTGCTCCCCATAACCTAGAAAGTGTAGCATTGGT 678
                                                                                  

consensus_8423#0      GAGC-TTATTCCTCAAACCGCATCGTTGCCGCG--------------------------- 711
consensus_8423#4      GAGC-TTATTCCTCAAACCGCATCGTTGCCGC---------------------------- 610
consensus_8423#2      GAGC-TTATTCCTCAAACCGCTTCGTTGCCGCGGTTTACAACGAACAACTGCGTATTTAC 672
consensus_8423#6      ------------------------------------------------------------
consensus_8423#3      AAAAATCGTTGCGTGAGCTGGGGGGTCGATT----------------------------- 678
consensus_8423#5      ------------------------------------------------------------
consensus_8423#1      AAGCTGTTGTTTTGGAACGGCGGCC----------------------------------- 703
                                                                                  

consensus_8423#0      --------------------------
consensus_8423#4      --------------------------
consensus_8423#2      GGTGTGCAGTTTTCATCCGGAGGTTG 698
consensus_8423#6      --------------------------
consensus_8423#3      --------------------------
consensus_8423#5      --------------------------
consensus_8423#1      --------------------------