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Anopheles gambiae
cluster # 8448 cluster # 8448       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8448#0 length = 1766 sequences # 6  
consensus_8448#1 length = 680 sequences # 2  
consensus_8448#2 length = 399 sequences # 1  
consensus_8448#3 length = 199 sequences # 1  

consensusID : consensus_8448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1766
fasta sequence
                              [CAGAACTGGTGCTGTGGGATGAA-CAAACGCAATGTTACGGCGCCCAAATAAACGACGCACCCTAGATACCATGAAAGGTGTTGATTGCTAAAGACAGCAGGACGGTGGACATGGAAGTCGTCATCCGCTAAGGAGTGTGT-ACAACTCACCTGCCGAAGCAATTAGCCCTTAAAATGGATGGCGCTCAAGTCGTTTGCCTATACATTGCCGCTGGCGGTATGGCGCATCGGGGGCTTAACCACCCTGCGATGAGACCCCAGTGAGTAGGAGGGTACGGTGGTGCGCGTCGAAGTGTTTGGCGCAACCGGCATGGAGCCGCCACTGGCACAGATCTTGGTGGTAGTAGCAAATATTCGAACGAGCTCTTGGATGACTGAAGTGGAGAAGGGTTTCGTGTCAACAGCAGTTGAACACGAGTTAGCCAATCCTAAGCCGCATGGGAATCCAGTCGTAACCCATCAGTCGGCGAAAGGGAATCCGGTTACCATTCCGGAGCCTGTTGAGTACCGAGTCGTTCTTGGTTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCAGGGATCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAAC-GTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTG-TTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTCGACCGTTACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGA-CA-GGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAGAAAGCCTAAGGTTCTGTTGTTGTAGTGTTTGCGACAAGAGACCTCTCCGACCGTTGACAAGACCGACCACTTGACAAACGTTTTAGTTTTTTAATTTGAGGAAGCAATAAACTTTTTTATCCCACCCACCGGTGGGCTGA]

[+] EMBL CNS08JIG             [CAGAACTGGTGCTGTGGGATGAA CAAACGCAATGTTACGGCGCCCAAATAAACGACGCACCCTAGATACCATGAAAGGTGTTGATTGCTAAAGACAGCAGGACGGTGGACATGGAAGTCGTCATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAAGCAATTAGCCCTTAAAATGGATGGCGCTCAAGTCGTTTGCCTATACATTGCCGCTGGCGGTATGGCGCATCGGGGGCTTAACCACCCTGCGATGAGACCCCAGTGAGTAGGAGGGTACGGTGGTGCGCGTCGAAGTGTTTGGCGCAACCGGCATGGAGCCGCCACTGGCACAGATCTTGGTGGTAGTAGCAAATATTCGAACGAGCTCTTGGATGACTGAAGTGGAGAAGGGTTTCGTGTCAACAGCAGTTGAACACGAGTTAGCCAATCCTAAGCCGCATGGGAATCCAGTCGTAACCCATCAGTCGGCGAAAGGGAATCCGGTTACCATTCCGGAGCCTGTTGAGTACCGAGTCGTTCTTGGTTAGGGCCAGCCGTAGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS090CT             [              TGGGATGAACCAAACGCAATGTTACGGCGCCCAAATAAACGACGCACCCTAGATACCATGAAAGGTGTTGATTGCTAAAGACAGCAGGACGGTGGACATGGAAGTCGTCATCCGCTAAGGAGTGTGT ACAACTCACCTGCCGAAGCAATTAGCCCTTAAAATGGATGGCGCTCAAGTCGTTTGCCTATACATTGCCGCTGGCGGTATGGCGCATCGGGGGCTTAACCACCCTGCGATGAGACCCCAGTGAGTAGGAGGGTACGGTGGTGCGCGTCGAAGTGTTTGGCGCAAGCGGCATGGAGCCGCCACTGGCACAGATCTTGGTGGTAGTAGCAAATATTCGAACGAGCTCTTGGATGACTGAAGTGGAGAAGGGTTTCGTGTCAACAGCAGTTGAACACGAGTTAGCCAATCCTAAGCCGCATGGGAATCCAGTCGTAACCCATCAGTCGGCGAAAGGGAATCCGGTTACCATTCCGGAGCCTGTTGAGTACCGAGTCGTTCTTGGTTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCAGGGATCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09R0X             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTCGGGGTTGGTTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCAGGGATCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAAC GTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTG TTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTCGACCGTTACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGA CA GGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCA GAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCG                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09F6H             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCAGGGATCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAAC GTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTG TTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTCGACCGTTACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACATGCGCGA CAGGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTC                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS09R0Y             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGTTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTCGACCGTTACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAAAAACGGTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAAAATGCGCGAGCA GGCCAAGAAGATGAACGTCGCCTCG TGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATTTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAGAAAGCCTAAGGTTCTGTTGTTGTAGTGTTTGCGACAAGAGACCTCTCCGACCGTTGACAAGACCGACCACTTGACAAACGTTTTAGTTTTTTAATTTGAGGAAGCAATAAACTTTTTTATCCCACCCACCGGTGGGCTGA]
[-] EMBL CNS09F6I             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGTTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTG TTCGGCTGTGCCTCGATCTGGACCATGACGATAATTGCCTTCGACCGTTACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAAAATGCGCGAGCA GGCCAAGAAGATGAACGTCGCCTCG TGCGTACGCAGGAAGCCCAGAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCGGACGAGAAAGCCTAAGGTTCTGTTGTTGTAGTGTTTGCGACAAGAGACCTCTCCGACCGTTGACAAGACCGACCACTTGACAAACGTTTTAGTATTT                                                 ]


>consensus_8448#0 CAGAACTGGTGCTGTGGGATGAACAAACGCAATGTTACGGCGCCCAAATAAACGACGCAC CCTAGATACCATGAAAGGTGTTGATTGCTAAAGACAGCAGGACGGTGGACATGGAAGTCG TCATCCGCTAAGGAGTGTGTACAACTCACCTGCCGAAGCAATTAGCCCTTAAAATGGATG GCGCTCAAGTCGTTTGCCTATACATTGCCGCTGGCGGTATGGCGCATCGGGGGCTTAACC ACCCTGCGATGAGACCCCAGTGAGTAGGAGGGTACGGTGGTGCGCGTCGAAGTGTTTGGC GCAACCGGCATGGAGCCGCCACTGGCACAGATCTTGGTGGTAGTAGCAAATATTCGAACG AGCTCTTGGATGACTGAAGTGGAGAAGGGTTTCGTGTCAACAGCAGTTGAACACGAGTTA GCCAATCCTAAGCCGCATGGGAATCCAGTCGTAACCCATCAGTCGGCGAAAGGGAATCCG GTTACCATTCCGGAGCCTGTTGAGTACCGAGTCGTTCTTGGTTCTTTGCAGCCGTTGCAA CGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTAT TGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTA ACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGA ACCGCATTTCGATGCCTGGACGCAGGGATCCGGCAACATGTCGGTGGTGGACAAGGTCCC ACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCT GTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAA CGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTG GTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTG ATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATG CTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTCGACCGT TACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCGCTGCT GACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGAAGAACAT GCGCGACAGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCAGAACACC AGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTTCATGGCC TGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGATCAGCCCG CTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCCGATCGTG TACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTCGCTATCG TGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCAGGCCTCG GACGAGAAAGCCTAAGGTTCTGTTGTTGTAGTGTTTGCGACAAGAGACCTCTCCGACCGT TGACAAGACCGACCACTTGACAAACGTTTTAGTTTTTTAATTTGAGGAAGCAATAAACTT TTTTATCCCACCCACCGGTGGGCTGA



consensusID : consensus_8448#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 680
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGTCGCGCCACGCGCTAGTGCAACAGGTCATCCCGTACAAGGCTCAGGGCACCCGAAAACCCCCCCTTTCTCGAATTCTCGAAACCGCGCCTCTTCGTTTACGTCGTCTCCAGCGTGCTAAAGCCCCTCCAGAGCCACCATGCCTTTCAAGCCAGCTGATAACCCCAAGTGCCCCAAGTGCGGCAATTCGGTGTACGCCGCCGAGGAGCGTGTCGCCGGAGGAAACAAATGGCACAAGCAGTGCTTCAAGTGCGGAATGTGCGGCAAGATGCTCGACTCCACAAACTGTGCAGAGCACGAAAACGAGCTGTACTGCAAGAACTGCCACGGCCGCAAGTACGGACCGAAGGGCTACGGTTTCGGTGGAGGCGCCGGCTGCCTCTCGATGGACACTGGCGCCCAGTTTCAGGGCGAGGGCAAGTAAATGCTCGTGCCACGTGTACTAGCATCACAAACCCGTTCATTTAAGTAAGAGTCCCCCCTGCGGAATAGCGCGAAGAAGCTTGCACCGTGCAGAAACCAAAAACCCAACAACATCTCCATTTGTTTTTGCCAAACGACACGTCGGTCGAGCTCCCCGTCTATTGAGGGAAGTGTGGAAGCGATGAAATTACTTATCACCACCATCAACACCACCATCTAAGTATTGAGTAA]

[+] EMBL BM642134             [CCGCCCACGCGTCCGCCCACGCGTCCGGTCGCGCCACGCGCTAGTGCAACAGGTCATCCCGTACAAGGCTCAGGGCACCCGAAAACCCCCCCTTTCTCGAATTCTCGAAACCGCGCCTCTTCGTTTACGTCGTCTCCAGCGTGCTAAAGCCCCTCCAGAGCCACCATGCCTTTCAAGCCAGCTGATAACCCCAAGTGCCCCAAGTGCGGCAATTCGGTGTACGCCGCCGAGGAGCGTGTCGCCGGAGGAAACAAATGGCACAAGCAGTGCTTCAAGTGCGGAATGTGCGGCAAGATGCTCGACTCCACAAACTGTGCAGAGCACGAAAACGAGCTGTACTGCAAGAACTGCCACGGCCGCAAGTACGGACCGAAGGGCTACGGTTTCGGTGGAGGCGCCGGCTGCCTCTCGATGGACACTGGCGCCCAGTTTCAGGGCGAGGGCAAGTAAATGCTCGTGCCACGTGTACTAGCATCACAAACCCGTTCATTTAAGTAAGAGTCCCCCCTGCGGAATAGCGCGAAGAAGCTTGCACCGTGCAGAAACCAAAAACCCAACAACATCTCCATTTGTTTTTGCCAAACGACACGTCGGTCGAGCTCCCCGTCTATTGAGGGAAGTGTGGAAGCGATGAAATTACTTATCACCACCATCAACACCACCATCTAAGTATTGAGTAA]
[+] EMBL BM625541             [CCGCCCACGCGTCCG   A GCAACAAGTCGCGCCACGCGCTAGTGCAACAGGTCATCCCGTACAAGGCTCAGGGCACCCGAAAACCCCCCCTTTCTCGAATTCTCGAAACCGCGCCTCTTCGTTTACGTCGTCTCCAGCGTGCTAAAGCCCCTCCAGAGCCACCATGCCTTTCAAGCCAGCTGATAACCCCAAGTGCCCCAAGTGCGGCAAGTCGGTGTACGCCGCCGAGGAGCGTGTCGCCGGAGGAAACAAATGGCACAAGCAGTGCTTCAAGTGCGGAATGTGCGGCAAGATGCTCGACTCCACAAACTGTGCAGAGCACGAAAACGAGCTGTACTGCAAGAACTGCCACGGCCGCAAGTACGGACCGAAGGGCTACGGTTTCGGTGGAGGCGCCGGCTGCCTCTCGATGGACACTGGCGCCCAGTTTCAGGGCGAGGGCAAGTAAATGCTCGTGCCACGTGTACTAGCATCACAAACCCGTTCATTTAAGTAAGAGTCCCCCCTGCGGAATAGCGCGAAGAAGCTTGCACCGTGCAGAAACCAAAAACCCAACAACATCTCCATTTGTTTTTG CGAACGACACGTCGGTCGAGCTCCCCGTCTATTGAGGGAAGTGTGGAAGCGATGAAATTACTTATCACCAC                              ]


>consensus_8448#1 CCGCCCACGCGTCCGCCCACGCGTCCGGTCGCGCCACGCGCTAGTGCAACAGGTCATCCC GTACAAGGCTCAGGGCACCCGAAAACCCCCCCTTTCTCGAATTCTCGAAACCGCGCCTCT TCGTTTACGTCGTCTCCAGCGTGCTAAAGCCCCTCCAGAGCCACCATGCCTTTCAAGCCA GCTGATAACCCCAAGTGCCCCAAGTGCGGCAATTCGGTGTACGCCGCCGAGGAGCGTGTC GCCGGAGGAAACAAATGGCACAAGCAGTGCTTCAAGTGCGGAATGTGCGGCAAGATGCTC GACTCCACAAACTGTGCAGAGCACGAAAACGAGCTGTACTGCAAGAACTGCCACGGCCGC AAGTACGGACCGAAGGGCTACGGTTTCGGTGGAGGCGCCGGCTGCCTCTCGATGGACACT GGCGCCCAGTTTCAGGGCGAGGGCAAGTAAATGCTCGTGCCACGTGTACTAGCATCACAA ACCCGTTCATTTAAGTAAGAGTCCCCCCTGCGGAATAGCGCGAAGAAGCTTGCACCGTGC AGAAACCAAAAACCCAACAACATCTCCATTTGTTTTTGCCAAACGACACGTCGGTCGAGC TCCCCGTCTATTGAGGGAAGTGTGGAAGCGATGAAATTACTTATCACCACCATCAACACC ACCATCTAAGTATTGAGTAA



consensusID : consensus_8448#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 399
fasta sequence
                              [CTGAGAGTCGTGCTTGGTTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCAGGGGTCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGTTTTTTTATGT]

[+] EMBL CNS08OK8             [CTGAGAGTCGTGCTTGGTTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTCTTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCAGGGGTCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGTTTTTTTATGT]


>consensus_8448#2 CTGAGAGTCGTGCTTGGTTCTTTGCAGCCGTTGCAACGTTAGCCTAAAACCATAAGTCTG AAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTATTGGAACCAAAGTAAACAGTGAAGA GTGTGTATCTCACAGCAATTACCAACCCGCGCATTAACAACATCAAGTGCCTGAGAGCTC TTCCGAACGTGTCGTAACAATGGCAGCCTTCGTAGAACCGCATTTCGATGCCTGGACGCA GGGGTCCGGCAACATGTCGGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCA TCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGC CATCTTCATGCTCGGAATGATCTCGATGTTTTTTTATGT



consensusID : consensus_8448#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 199
fasta sequence
                              [CAACACAGAGGGAAAAGGAAAATGGTGGAGTAAGCGCGAATAAGGAAGCGCGAGGAAAATTTGTGAGCGCGCGCGCGCGTACCGGTGCGCACCGGGCGAGCCGAGTGGAAAAGAATTGCAGGAGAAAAAACGGGAAAACGGGACGTATTTCCCCCCCCCCCCCCCATCTCCCAAGCACCCCGCTCACCCCCATTGCAGT]

[+] EMBL BX615150             [CAACACAGAGGGAAAAGGAAAATGGTGGAGTAAGCGCGAATAAGGAAGCGCGAGGAAAATTTGTGAGCGCGCGCGCGCGTACCGGTGCGCACCGGGCGAGCCGAGTGGAAAAGAATTGCAGGAGAAAAAACGGGAAAACGGGACGTATTTCCCCCCCCCCCCCCCATCTCCCAAGCACCCCGCTCACCCCCATTGCAGT]


>consensus_8448#3 CAACACAGAGGGAAAAGGAAAATGGTGGAGTAAGCGCGAATAAGGAAGCGCGAGGAAAAT TTGTGAGCGCGCGCGCGCGTACCGGTGCGCACCGGGCGAGCCGAGTGGAAAAGAATTGCA GGAGAAAAAACGGGAAAACGGGACGTATTTCCCCCCCCCCCCCCCATCTCCCAAGCACCC CGCTCACCCCCATTGCAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8448#0      CAGAACTGGTGCTGTGGGATGAACAAACGCAATGTTACGGCGCCCAAATAAACGACGCAC 60
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CCTAGATACCATGAAAGGTGTTGATTGCTAAAGACAGCAGGACGGTGGACATGGAAGTCG 120
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      TCATCCGCTAAGGAGTGTGTACAACTCACCTGCCGAAGCAATTAGCCCTTAAAATGGATG 180
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      GCGCTCAAGTCGTTTGCCTATACATTGCCGCTGGCGGTATGGCGCATCGGGGGCTTAACC 240
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      ACCCTGCGATGAGACCCCAGTGAGTAGGAGGGTACGGTGGTGCGCGTCGAAGTGTTTGGC 300
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      -------------------------------------CCGCCCACGCGTCCGCCCACGCG 23
                                                                                  

consensus_8448#0      GCAACCGGCATGGAGCCGCCACTGGCACAGATCTTGGTGGTAGTAGCAAATATTCGAACG 360
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      TCCGGTCGCGCCACGCGCTAGTGCAACAGGTCATCCCGTACAAGGCTCAGGGCACCCGAA 83
                                                                                  

consensus_8448#0      AGCTCTTGGATGACTGAAGTGGAGAAGGGTTTCGTGTCAACAGCAGTTGAACACGAGTTA 420
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      AACCCCCCCTTTCTCGAATTCTCGAAACCGCGCCTCTTCGTTTACGTCGTCTCCAGCGTG 143
                                                                                  

consensus_8448#0      GCCAATCCTAAGCCGCATGGGAATCCAGTCGTAACCCATCAGTCGGCGAAAGGGAATCCG 480
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      CTAAAGCCCCTCCAGAGCCACCATGCCTTTCAAGCCAGCTGATAACCCCAAGTGCCCCAA 203
                                                                                  

consensus_8448#0      GTTACCATTCCGGAGCCTGTTGAGTACCGAGTCGTTCTTGGTTCTTTGCAGCCGTTGCAA 540
consensus_8448#2      ------------------------CTGAGAGTCGTGCTTGGTTCTTTGCAGCCGTTGCAA 36
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      GTGCGGCAATTCGGTGTACGCCGCCGAGGAGCGTGTCGCCGGAGGAAACAAATGGCACAA 263
                                                                                  

consensus_8448#0      CGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTAT 600
consensus_8448#2      CGTTAGCCTAAAACCATAAGTCTGAAGTAGTTCGAGTAACATCGATTTTCTTCAGCTTAT 96
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      GCAGTGCTTCAAGTGCGGAATGTGCGGCAAGATGCTCGACTCCACAAACTGTGCAGAGCA 323
                                                                                  

consensus_8448#0      TGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTA 660
consensus_8448#2      TGGAACCAAAGTAAACAGTGAAGAGTGTGTATCTCACAGCAATTACCAACCCGCGCATTA 156
consensus_8448#3      -CAACACAGAGGGAAAAG-GAAAATGGTGGAG-TAAGCGCGAATAAGGAAGCGCG-AGGA 56
consensus_8448#1      CGAAAACGAGCTGTACTGCAAGAACTGCCACG---GCCGCAAGTACGGACCGAAGGGCTA 380
                         *  *       *  *  *  *  *           ** * **   *     *    *

consensus_8448#0      ACAACA--TCAAGTGCCTGAGA-GCTCTTCCGAACGTGTCGTAACAATGG--CAGCCTTC 715
consensus_8448#2      ACAACA--TCAAGTGCCTGAGA-GCTCTTCCGAACGTGTCGTAACAATGG--CAGCCTTC 211
consensus_8448#3      AAATTT--GTGAGCGCGCGCGC-GCGTACCGGTGCGCACCG-------GG--CGAGCCGA 104
consensus_8448#1      CGGTTTCGGTGGAGGCGCCGGCTGCCTCTCGATGGACACTGGCGCCCAGTTTCAGGGCGA 440
                                    **    *  **    *          *       *   *       

consensus_8448#0      GTAGAACCGCATTTCGATGCCTGGACGCAGGGATCCGGCAACATGTCGGTGGTGGACAAG 775
consensus_8448#2      GTAGAACCGCATTTCGATGCCTGGACGCAGGGGTCCGGCAACATGTCGGTGGTGGACAAG 271
consensus_8448#3      GTGGAAAAGAATTGC-AGGAGAAAAAACGGGAAAACGG-GACGTATT--TCCCCCCCCCC 160
consensus_8448#1      GGGCAAGTAAATGCTCGTGCCACGTGTACTAGCATCACAAACCCGTTCATTTAAGTAAGA 500
                      *   **    **      *                *    **   *   *          

consensus_8448#0      GTCCCACCAGAGATGCTCCACATGGT-GCATCCCCACTGGAACCAGTTCCCGCCCATGAA 834
consensus_8448#2      GTCCCACCAGAGATGCTCCACATGGT-GCATCCCCACTGGAACCAGTTCCCGCCCATGAA 330
consensus_8448#3      CCCCCATCTCCCAAGCACCCC---GC-TCACCCCCATTGCAGT----------------- 199
consensus_8448#1      GTCCCCCCTGCGGAATAGCGCGAAGAAGCTTGCACCGTGCAGAAACCAAAAACCCAACAA 560
                        ***  *          * *   *   *   * *  ** *                   

consensus_8448#0      C-CCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGA 893
consensus_8448#2      C-CCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGT 389
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      CATCTCCATTTGTTTTTGCCAAACGACACGTCGGTCGAGCTCCCCGTCTATTGAGGGAAG 620
                                                                                  

consensus_8448#0      CCGGTAACGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAA 953
consensus_8448#2      TTTTTTATGT-------------------------------------------------- 399
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      TGTGGAAGCGATGAAATTACTTATCACCACCATCAACACCACCATCTAAGTATTGAGTAA 680
                                                                                  

consensus_8448#0      CTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCC 1013
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      GATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTA 1073
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTT 1133
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CGACCGTTACAACGTCATCGTGAAGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGC 1193
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CGCTGCTGACCATCATCTACTCGTACACCTTCATCCTGAAGGCTGTGTCCGCTCACGAGA 1253
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      AGAACATGCGCGACAGGCCAAGAAGATGAACGTCGCCTCGCTGCGTACGCAGGAAGCCCA 1313
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      GAACACCAGCACCGAGATGAAGCTGGCCAAGGTCGCCCTGGTCACCATCTCGCTCTGGTT 1373
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CATGGCCTGGACGCCGTATCTGGTCATCAACTTCACCGGAATCTTCAAGGCTGCCCCGAT 1433
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CAGCCCGCTGGCCACCATCTGGGGCTCGCTGTTCGCCAAGGCCAACGCCGTCTACAACCC 1493
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      GATCGTGTACGGCATCAGCCATCCGAAGTATCGCGCTGCCCTGTACCAGAAGTTCCCGTC 1553
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      GCTATCGTGCCAGGATGCACCAGTCGACGATGGCCAGTCGGTTGCGTCGGGTGCCACCCA 1613
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      GGCCTCGGACGAGAAAGCCTAAGGTTCTGTTGTTGTAGTGTTTGCGACAAGAGACCTCTC 1673
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      CGACCGTTGACAAGACCGACCACTTGACAAACGTTTTAGTTTTTTAATTTGAGGAAGCAA 1733
consensus_8448#2      ------------------------------------------------------------
consensus_8448#3      ------------------------------------------------------------
consensus_8448#1      ------------------------------------------------------------
                                                                                  

consensus_8448#0      TAAACTTTTTTATCCCACCCACCGGTGGGCTGA 1766
consensus_8448#2      ---------------------------------
consensus_8448#3      ---------------------------------
consensus_8448#1      ---------------------------------
                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)