cluster # 8454

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Anopheles gambiae
cluster # 8454 cluster # 8454 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8454#0 length = 1457 sequences # 5
consensus_8454#1 length = 923 sequences # 3

consensus_8454#2 length = 663 sequences # 1
consensus_8454#3 length = 598 sequences # 1

consensusID : consensus_8454#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1457
fasta sequence

                              [CCGACCGTAGCAGCTAGTAGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTTGGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAACGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGTCACTCGTTCGTTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGC-GGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGG-AAAAAAACCCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTACGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTGTACTAGGGCGAAAGGCAAGACTCAAATTCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAGAGAGAGAGCAGAAGTCCCCCGAGCAGTCGCCGAGACAGAGTAACGCAGAATGTC-TTCGAATCAGCAAACAGCAAGCCAACAATCAGCCGCAAATGCATCACAGCAACAGCCGTCGTCCGGGGCGACCGGCGGCGGTGGCGGCGGCGGCGGCGGCAGCGCCAACTCCGGGAACGATCGCGTGATCGACAGTGTGCTCTTTCCGCCGAAACACAAGCTGACCGCGTCGGAGGTGTTCGACTCACACACGGGCAAGCC-GCGCCCGGACGTGCTAAAGCAACACTTCATCCTCGAGGGCCGAATCGAGGAGAACGCGGCGCTGCGGATCATCCAGGAGGGGGCCGCGATCCTCAAGGCGGAGAGCACCATGATCGACATCGAGGCGCCGGTCACCGTGTGCGGCGACATCCACGGCCAGTTCTACGATCTGATGAAGCTGTTCGAGATCGGCGGCTCGCCGGCGTCGA]

[+] EMBL BM597306             [CCGACCGTAGCAGCTAGTAGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTTGGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAACGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGTCACTCGTTCGTTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGGAAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM613196             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACGGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCGGGCCGAGGCAGCAAATACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGC GGCAGATCGAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGG AAAAAAACCCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTACGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTGTACTAGGGCGAAAGGCAAGACTCAAATTCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAGAGAGAGAGCAGAAGTCCCCCGAGCAGTCGCCGAGACAGAGTAACGCAGAATGTC TTCGAATCAGCAAACAGCAAGCCAACAATCAGCCGCAAATGCATCACAGCAACAGCCGTCGTCCGGGGCGACCGGCGGCG                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM583702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGC GGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTGCGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTGTACTAGGGCGAAAGGCAAAACTCAAATTCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAGAGAGAGAGCAGAAGTCCCCCGAGCAGTCGCCGAGACAGAGTAACGCAGAATGTCTTTCGAATCAGCAAACAGCAAGCCAACAATCAGCCGCAAATG                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM612200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgACCAGG AAAAAAACCCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTACGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTGTACTAGGGCGAAAGGCAAGACTCAAATTCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAGAGAGAGAGCAGAAGTCCCCCGAGCAGTCGCCGAGACAGAGTAACGCAGAATGTC TTCGAATCAGCAAACAGCAAGCCAACAATCAGCCGCAAATGCATCACAGCAACAGCCGTCGTCCGGGGCGACCGGCGGCGGTGGCGGCGGCGGCGGCGGCAGCGCCAACTCCGGGAACGATCGCGTGATCGACAGTGTGCTCTTTCCGCCGAAACACAAGCTGACCGCGTCGGAGGTGTTCGACTCACACACGGGCAAGCCGGCGCCCGGACGTGCTAAAGCAACACTTCATCCTCGAGGGCCGAATCGAGGAGAACGCGGCGCTGCGGATCATCCAGGA                                                                                                                                   ]
[+] EMBL BM622841             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTGTACTAGGGCGAAAGGCAAAACTCAAATTCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAGAGAGAGAGCAGAAGTCCCCCGAGCAGTCGCCGAGACAGAGTAACGCAGAATGTC TTCGAATCAGCAAACAGCAAGCCAACAATCAGCCGCAAATGCATCACAGCAACAGCCGTCGTCCGGGGCGACCGGCGGCGGTGGCGGCGGCGGCGGCGGCAGCGCCAACTCCGGGAACGATCGCGTGATCGACAGTGTGCTCTTTCCGCCGAAACACAAGCTGACCGCGTCGGAGGTGTTCGACTCACACACGGGCAAGCC GCGCCCGGACGTGCTAAAGCAACACTTCATCCTCGAGGGCCGAATCGAGGAGAACGCGGCGCTGCGGATCATCCAGGAGGGGGCCGCGATCCTCAAGGCGGAGAGCACCATGATCGACATCGAGGCGCCGGTCACCGTGTGCGGCGACATCCACGGCCAGTTCTACGATCTGATGAAGCTGTTCGAGATCGGCGGCTCGCCGGCGTCGA]




>consensus_8454#0
CCGACCGTAGCAGCTAGTAGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTT
GGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAA
CGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGT
CACTCGTTCGTTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTT
AGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACA
CACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCT
CATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTT
ATCGTCGTGTTCGCGCCACCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAA
AGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACG
AGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACC
ACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTG
ATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCA
GGAAAAAAACCCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTT
ACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTACGTTCGATACGTTCGTCCGTATTAGTA
GCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGA
TTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTGTACTAGGGCGAAAGGCAAGACTCAAAT
TCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAGAGAGAGAGCAGAAGTCCCCCGAGCAGT
CGCCGAGACAGAGTAACGCAGAATGTCTTCGAATCAGCAAACAGCAAGCCAACAATCAGC
CGCAAATGCATCACAGCAACAGCCGTCGTCCGGGGCGACCGGCGGCGGTGGCGGCGGCGG
CGGCGGCAGCGCCAACTCCGGGAACGATCGCGTGATCGACAGTGTGCTCTTTCCGCCGAA
ACACAAGCTGACCGCGTCGGAGGTGTTCGACTCACACACGGGCAAGCCGCGCCCGGACGT
GCTAAAGCAACACTTCATCCTCGAGGGCCGAATCGAGGAGAACGCGGCGCTGCGGATCAT
CCAGGAGGGGGCCGCGATCCTCAAGGCGGAGAGCACCATGATCGACATCGAGGCGCCGGT
CACCGTGTGCGGCGACATCCACGGCCAGTTCTACGATCTGATGAAGCTGTTCGAGATCGG
CGGCTCGCCGGCGTCGA

consensusID : consensus_8454#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 923
fasta sequence

                              [CCGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTTGGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAACGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGTCACTCGTTCGTTTTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCC-TTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTT]

[+] EMBL BM602395             [CCGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTTGGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAACGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGTCACTCGTTCGTTTTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTC                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM603192             [                                                                                                                                                                                 ccgGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCC TTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAAC                                                                                 ]
[+] EMBL BM613110             [                                                                                                                                                                                                                                                                             ccgCCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCC TTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACT GGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTT]




>consensus_8454#1
CCGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTTGGCGTGCATTGGCGATC
TCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAACGTTTCGGTTACCCGTT
TTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGTCACTCGTTCGTTTTACT
GTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTG
GCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACAC
GCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCC
GCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCG
CCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGT
GCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCTTC
ATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCTGG
CCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGA
TCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAG
CAAACACCACGCACTAGATCGTGCGCACTGGGTTGGAACGTACGGAACGTCCGCGGGCCC
ATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAA
ACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGAC
AGTCACGGTTACTTAACTAGTTT

consensusID : consensus_8454#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence

                              [CCGCGGACGCGTGGGCACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAAC]

[+] EMBL BM583502             [CCGCGGACGCGTGGGCACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAAC]




>consensus_8454#2
CCGCGGACGCGTGGGCACGGTTCAGTTCGCAGTTTAGCACAGTTTTTAGTTTCATCGTTG
TGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACACACACACACACTTAC
ACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGCCTCATCATTCGCACG
CCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATTTTATCGTCGTGTTCG
CGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTGTGCGCGTGTGTATTT
GTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATACTCGTCGCTAGTGCT
TCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTCGTCGTCGTGGTCGCT
GGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCG
GATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAAC
AGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCC
CATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTA
AAC

consensusID : consensus_8454#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 598
fasta sequence

                              [CCGAATGGGAAGCTTTGTGACGATCGCTGGCAAAACGGTCGTCCTCTCCCCGTTCAATAGAAGTTGTCTTCTATCGATGCCGACACGTTATCTTGTACACGAACTGAACTGAATCCCCTTTTCTAATAACGTTTCCTATTCTTCTCATTTTAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTGCGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTA]

[+] EMBL BM602348             [CCGAATGGGAAGCTTTGTGACGATCGCTGGCAAAACGGTCGTCCTCTCCCCGTTCAATAGAAGTTGTCTTCTATCGATGCCGACACGTTATCTTGTACACGAACTGAACTGAATCCCCTTTTCTAATAACGTTTCCTATTCTTCTCATTTTAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAACGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCTCTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTGCGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTA]




>consensus_8454#3
CCGAATGGGAAGCTTTGTGACGATCGCTGGCAAAACGGTCGTCCTCTCCCCGTTCAATAG
AAGTTGTCTTCTATCGATGCCGACACGTTATCTTGTACACGAACTGAACTGAATCCCCTT
TTCTAATAACGTTTCCTATTCTTCTCATTTTAGGGCACAATTCGCTGCAGCCAGTGGAGC
TGTGTTTATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCT
GGCCGAGGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGTTGGAA
CGTACGGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAG
CAGCTCTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAG
CAAAAACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTG
TTCTGCGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAG
AGCGGAGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8454#1      -----------------CCGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTT 43
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      CCGACCGTAGCAGCTAGTAGGCCCGGGCGGTGTTGTTTCAAGCGCTCGTCGTACCTTTTT 60
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      GGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAA 103
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      GGCGTGCATTGGCGATCTCCCCGCCGCTACTTTCGTTTTATTACCGCGTCTCTACGCAAA 120
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      CGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGT 163
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      CGTTTCGGTTACCCGTTTTGTTGTTGTGTGTGTGTGCTTGTTTTTTTTTTTTAATTCGGT 180
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      CACTCGTTCGTTTTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTT 223
consensus_8454#2      ------------CCGCGGACGCGTGGG---CACGGTTCAGTTCGCAGTTTAGCACAGTTT 45
consensus_8454#0      CACTCGTTCG--TTACTGTTTTCTGTGTCACACGGTTCAGTTCGCAGTTTAGCACAGTTT 238
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      TTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACA 283
consensus_8454#2      TTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACA 105
consensus_8454#0      TTAGTTTCATCGTTGTGGCTGTTGTTTGTTTGATTGCCTCGTTTTACTACCACACACACA 298
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      CACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGC 343
consensus_8454#2      CACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGC 165
consensus_8454#0      CACACACACACTTACACGCCAACCACTTTAAAAGGCCGCTACACCAAATTACGGTGCAGC 358
consensus_8454#3      -------------------------------------------CCGAAT----GGGAAGC 13
                                                                 ** ***    * * ***

consensus_8454#1      CTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATT 403
consensus_8454#2      CTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATT 225
consensus_8454#0      CTCATCATTCGCACGCCGCCGCGAGAGCCTTTTTTTTAGCCCCGTAACCGTATTTGGATT 418
consensus_8454#3      TTTGTGA--CGATCGCTGGCAAAACGGTCGTCCTCTCC-CCGTTCAATAGAAGTTGTCTT 70
                       *  * *  **  *** * *   *  * * *  * *   **    **  * * ***  **

consensus_8454#1      TTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTG 463
consensus_8454#2      TTATCGTCGTGTTCGCGCCACCATCGTCATCGCCGTCATCGTTGGCACAGCACGTGTGTG 285
consensus_8454#0      TTATCGTCGTGTTCGCGCCACCATC----------------------------------- 443
consensus_8454#3      CTATCGATGCCGACACGTTATCTT-----------------------------------G 95
                       *****  *    * **  * * *                                    

consensus_8454#1      TGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATA 523
consensus_8454#2      TGCGCGTGTGTATTTGTGCAACTGTTTGTGTGGTCACGCGTGTCACATCCTTCGGTCATA 345
consensus_8454#0      ------------------------------------------------------------
consensus_8454#3      TACACG-------------AACTGA----------------------------------- 107
                                                                                  

consensus_8454#1      CTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTC 583
consensus_8454#2      CTCGTCGCTAGTGCTTCATCGACGACCACCACCACCACCATCATCATCATCATCATCGTC 405
consensus_8454#0      ------------------------------------------------ATCATCATCGTC 455
consensus_8454#3      -----------------ACTGA--------------------ATCCCCTTTTCTAATAAC 130
                                                                       *    *    *

consensus_8454#1      GTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTT 643
consensus_8454#2      GTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTT 465
consensus_8454#0      GTCGTCGTGGTCGCTGGCCCCAGAAAGGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTT 515
consensus_8454#3      GTTTCCTATTCTTCTCATTTTA----GGGCACAATTCGCTGCAGCCAGTGGAGCTGTGTT 186
                      **   *       **      *    **********************************

consensus_8454#1      TATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGA 703
consensus_8454#2      TATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGA 525
consensus_8454#0      TATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGA 575
consensus_8454#3      TATCACTACAGACCGGATCCAAACGAGGACAAACGCGAGGAATTGTTTCGGCCTGGCCGA 246
                      ************************************************************

consensus_8454#1      GGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGGGTTGGAACGTAC 763
consensus_8454#2      GGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGG-TTGGAACGTAC 584
consensus_8454#0      GGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGG-TTGGAACGTAC 634
consensus_8454#3      GGCAGCCAGTACAACAGCAAACACCACGCACTAGATCGTGCGCACTGG-TTGGAACGTAC 305
                      ************************************************ ***********

consensus_8454#1      GGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCT 823
consensus_8454#2      GGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCT 644
consensus_8454#0      GGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCT 694
consensus_8454#3      GGAACGTCCGCGGGCCCATCTTAGTGATGCAATTTTAAGTCAGCGGCAAATCAAGCAGCT 365
                      ************************************************************

consensus_8454#1      CTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAA 883
consensus_8454#2      CTACGGATAGCTTGTAAAC----------------------------------------- 663
consensus_8454#0      CTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAC-CCAGAAAGCGTCTTAAAGCAAAA 753
consensus_8454#3      CTACGGATAGCTTGTAAACAAAACCAGGAAAAAAAAACCAGAAAGCGTCTTAAAGCAAAA 425
                      *******************                                         

consensus_8454#1      ACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTT-------------------- 923
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      ACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTA 813
consensus_8454#3      ACGGATATCTTACAGACAGTCACGGTTACTTAACTAGTTTGTAAAGCTTAGTGTGTTCTG 485
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      CGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGG 873
consensus_8454#3      CGTTCGATACGTTCGTCCGTATTAGTAGCTGCGTGTTTTGTTTTCTTGCGCGAAGAGCGG 545
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      AGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTAGTGTTTG 933
consensus_8454#3      AGAGCACCCATTCGCTGTGGCAGTAGATTGAGCTAGTAAAAGCAGCGCTGGTA------- 598
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      TACTAGGGCGAAAGGCAAGACTCAAATTCACTGTAAGCAGAGCCAGAGAGAGAGAAAGAG 993
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      AGAGAGAGCAGAAGTCCCCCGAGCAGTCGCCGAGACAGAGTAACGCAGAATGTCTTCGAA 1053
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      TCAGCAAACAGCAAGCCAACAATCAGCCGCAAATGCATCACAGCAACAGCCGTCGTCCGG 1113
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      GGCGACCGGCGGCGGTGGCGGCGGCGGCGGCGGCAGCGCCAACTCCGGGAACGATCGCGT 1173
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      GATCGACAGTGTGCTCTTTCCGCCGAAACACAAGCTGACCGCGTCGGAGGTGTTCGACTC 1233
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      ACACACGGGCAAGCCGCGCCCGGACGTGCTAAAGCAACACTTCATCCTCGAGGGCCGAAT 1293
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      CGAGGAGAACGCGGCGCTGCGGATCATCCAGGAGGGGGCCGCGATCCTCAAGGCGGAGAG 1353
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      ------------------------------------------------------------
consensus_8454#2      ------------------------------------------------------------
consensus_8454#0      CACCATGATCGACATCGAGGCGCCGGTCACCGTGTGCGGCGACATCCACGGCCAGTTCTA 1413
consensus_8454#3      ------------------------------------------------------------
                                                                                  

consensus_8454#1      --------------------------------------------
consensus_8454#2      --------------------------------------------
consensus_8454#0      CGATCTGATGAAGCTGTTCGAGATCGGCGGCTCGCCGGCGTCGA 1457
consensus_8454#3      --------------------------------------------