cluster # 8467

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Anopheles gambiae
cluster # 8467 cluster # 8467 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8467#0 length = 1721 sequences # 7
consensus_8467#1 length = 678 sequences # 1

consensus_8467#2 length = 486 sequences # 1
consensus_8467#3 length = 351 sequences # 1

consensusID : consensus_8467#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1721
fasta sequence

                              [TATGATTCTTTCCAGCATTCCTGTCTACTTCATATTTATTGCGTGGCGAAACAAACCTAAATGGTTCAACCGCTCGATGGGTGGAATTACGCAGAGTTTACAAAAGTTAATGATGGTGGTGCGGCCAAAACAGAAATAAGCGCGAAAAGTGGGTCTTACACGGTTCCTCCAAAAAATGCTCATGGTCGTAGGAAAGACCAAACCAGCTCAGGTTTAAACAAACATGCATCCATACGATCATACGAACACACCGTTGCCATCATTTGCTGTGTATGCCGACCAAAACGAGGATAGAGCCATTCCAGCTCTACATTCCAGAACGGCGCAGAAGTAGTAGTGAGAAAGGATTAGAGCGATCTTTATGTTGTTTTAAAACGTTTTTTTTTAATTTGTGCTTGTTTGATCGTCCCATCCCTTGCTGAAGGCTGTTAAAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAATTTGACGTCAGTTACAAATTGATTTCGTTAGAAGGGATGCCACGAGGCG-AAAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTG-AATCGGCTCTGCAGAACAGCTACTGGCTTTTAC-TTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTTTAAATAAGCTATTTATATAAACACATTCCATAGGGGAAAGGATTGCTAAATTGCTAAATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACATTTGCATGAAACGTATTCAAATTATAGCGAAAAGACTTTGTCGTTTAAAAAATTAACAGAAAGTTGTTTTTAACGGAGCTTCCATAGGCCTGATTTCTAACGTAAATGTGGTCGATCAGCATTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATTAGTGAAGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAGCTCGTATGGCTCTGCACGATCTCTGTGCAAAAACAGATTTGCAAAGAGAAGAAAAAGTCCCAAATGAGCTATGTTGTTGACAATAATAATAGAAACACAATGTTCGCACGTAAAACCCTGGACGGATATTGGTAGTGGCCCCTGTCGAATACATGTATTATTCATAATCAATCATCATGCTCGAATAGAGAAAGTATATCGTTAGGTGTCATATAGTTCTACATGTGTATAGAGCGTACAAATGAATGCAAATCCCGGCGCCTTCGCAGCGATCAGATCCTTGGAAATATTTATCGAAGCGATGAAGCAAGCTACTGGAGACGATAACATTCAGGCATGAGTGCCGTGCGAAAATAGCCAGCGATGTATCAATGTATTGTAAAGTATTGTCAAATATACGATGAACCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BX627818             [TATGATTCTTTCCAGCATTCCTGTCTACTTCATATTTATTGCGTGGCGAAACAAACCTAAATGGTTCAACCGCTCGATGGGTGGAATTACGCAGAGTTTACAAAAGTTAATGATGGTGGTGCGGCCAAAACAGAAATAAGCGCGAAAAGTGGGTCTTACACGGTTCCTCCAAAAAATGCTCATGGTCGTAGGAAAGACCAAACCAGCTCAGGTTTAAACAAACATGCATCCATACGATCATACGAACACACCGTTGCCATCATTTGCTGTGTATGCCGACCAAAACGAGGATAGAGCAATTCCAGCTCTACATTCCAGAACGGCGCAGAAGTAGTAGTGAGAAAGGATTAGAGCGATCTTTATGTTGTTTTAAAACGTTTTTTTTTAATTTGTGCTTGTTTGATCGTCCCATCCCTTGCTGAAGGCTGTTAAAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAATTTGACGTCAGTTACAAATTGATTTCGTTAGAAGGGATGCCACGAGGCG AAAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAGGCGCAATAGTTCCTTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTGAAATCGGCTCTGCAGAACAGCTACTGGCTTTTAC TTTTTTTTATTCGATTTCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM604418             [                              ccgATTTATTGCGTGGCGAAACAAACCTAAATGGTTCAACCGCTCGATGGGTGGAATTACGCAGAGTTTACAAAAGTTAATGATGGTGGTGCGGCCAAAACAGAAATAAGCGCGAAAAGTGGGTCTTACACGGTTCCTCCAAAAAATGCTCATGGTCGTAGGAAAGACCAAACCAGCTCAGGTTTAAACAAACATGCATCCATACGATCATACGAACACACCGTTGCCATCATTTGCTGTGTATGCCGACCAAAACGAGGATAGAGCCATTCCAGCTCTACATTCCAGAACGGCGCAGAAGTAGTAGTGAGAAAGGATTAGAGCGATCTTTATGTTGTTTTAAAACGTTTTTTTTTAATTTGTGCTTGTTTGATCGTCCCATCCCTTGCTGAAGGCTGTTAAAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAATTTGACGTCAGTTACAAATTGATTTCGTTAGAAGGGATGCCACGAGGCGAAAAAAAGAAAATGCAGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX628238             [                                                                 TCAACCGCTCGATGGGTGGAATTACGCAGAGTTTACAAAAGTTAATGATGGTGGTGCGGCCAAAACAGAAATAAGCGCGAAAAGTGGGTCTTACACGGTTCCTCCAAAAAATGCTCATGGTCGTAGGAAAGACCAAACCAGCTCAGGTTTAAACAAACATGCATCCATACGATCATACGAACACACCGTTGCCATCATTTGCTGTGTATGCCGACCAAAACGAGGATAGAGCCATTCCAGCTCTACATTCCAGAAAGGCGCAGAAGTAGTAGTGCGAAAGGATTAGAGCGATCTTTATGTTGTTTTAAAACGTTTTTTTTTAATTTGTCCTTGTTTGATCGTCCCATCCCTTGCTGAAGGCTGTTAAAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAATTTGACGTCAGTTACAAATTGATTTCGTTAGAAGGGATGCCACGAGGTG AGAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGATAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM580680             [                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAATTTGACGTCAGTTACAAATTGATTTCGTTAGAAGGGATGCCACGAGGCG AAAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTG AATCGGCTCTGCAGAACAGCTACTGGCTTTTAC TTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTTTAAATAAGCTATTTATATAAACACATTCCATAGGGGAAAGGATTGCTAAATTGCTAAATTAATCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACAACTGCAAACCAAACATTTGCATGAAACGTATTCAAATTATAGCGAAAAGACTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM625986             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCCAAGCAAAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAACAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACCG AATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTTTAACTAAGCTATTTATATAAACACATTCCATAGGGGAAAGGATTGCTAAATTGCTAAATTATTCCGTGTGCTTGGTAACTGCTAACAAATTAAAAACGTGC AAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACTAAACATTTGCATGAAACGTATTCAAATTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX608768             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTTTAAATAAGCTATTTATATAAACACATTCCATAGGGGAAAGGATTGCTAAATTGCTAAATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACATTTGCATGAAACGTATTCAAATTATAGCGAAAAGACTTTGTCGTTTAAAAAATTAACAGAAAGTTGTTTTTAACGGAGCTTCCATAGGCCTGATTTCTAACGTAAATGTGGTCGATCAGCATTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATTAGTGAAGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAGCTCGTATGGCTCTGCACGATCTCTGTGCAAAAACAGATTTGCAAAGAGAAGAAAAAGTCCCAAATGAGCTATGTTGTTGACAATAATAATAGAAACACAATGTTCGCACGTAAAACCCTGGACGGATATTGGTAGTGGCCCCTGTCGAATACATGTATTATTCATAATCAATCATCATGCTCGAATAGAGAAAGTATATCGTTAGGTGTCATATAGTTCTACATGTGTATAGAGCGTACAAATGAATGCAAATCCCGGCGCCTTCGCAGCGATCAGATCCTTGGAAATATTTATCGAAGCGATGAAGCAAGCTACTGGAGACGATAACATTCAGGCATGAGTGCCGTGCGAAAATAGCCAGCGATGTATCAATGTATTGTAAAGTATTGTCAAATATACGA                                     ]
[-] EMBL AGA281874            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATTTATCGAAGCGATGAAGCAAGCTACTGGAGACGATAACATTCAGGCATGAGTGCCGTGCGAAAATAGCCAGCGATGTATCAATGTATTGTAAAGTATTGTCAAATATACGATGAACCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_8467#0
TATGATTCTTTCCAGCATTCCTGTCTACTTCATATTTATTGCGTGGCGAAACAAACCTAA
ATGGTTCAACCGCTCGATGGGTGGAATTACGCAGAGTTTACAAAAGTTAATGATGGTGGT
GCGGCCAAAACAGAAATAAGCGCGAAAAGTGGGTCTTACACGGTTCCTCCAAAAAATGCT
CATGGTCGTAGGAAAGACCAAACCAGCTCAGGTTTAAACAAACATGCATCCATACGATCA
TACGAACACACCGTTGCCATCATTTGCTGTGTATGCCGACCAAAACGAGGATAGAGCCAT
TCCAGCTCTACATTCCAGAACGGCGCAGAAGTAGTAGTGAGAAAGGATTAGAGCGATCTT
TATGTTGTTTTAAAACGTTTTTTTTTAATTTGTGCTTGTTTGATCGTCCCATCCCTTGCT
GAAGGCTGTTAAAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAAT
TTGACGTCAGTTACAAATTGATTTCGTTAGAAGGGATGCCACGAGGCGAAAAAAGAAAAT
GCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTTCAAAGAAA
CATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGT
CAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAACAGGTCCACAAGT
CAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAA
TAATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTTATTCTATTTC
AGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAG
AACCAGAATGGTGCTTGTTTCTGTTTAAATAAGCTATTTATATAAACACATTCCATAGGG
GAAAGGATTGCTAAATTGCTAAATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAA
ACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACAT
TTGCATGAAACGTATTCAAATTATAGCGAAAAGACTTTGTCGTTTAAAAAATTAACAGAA
AGTTGTTTTTAACGGAGCTTCCATAGGCCTGATTTCTAACGTAAATGTGGTCGATCAGCA
TTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATTAGTGAAGGAAAGGAAGTGTAAGGA
GTAACGCATACATATATGTATAGCTCGTATGGCTCTGCACGATCTCTGTGCAAAAACAGA
TTTGCAAAGAGAAGAAAAAGTCCCAAATGAGCTATGTTGTTGACAATAATAATAGAAACA
CAATGTTCGCACGTAAAACCCTGGACGGATATTGGTAGTGGCCCCTGTCGAATACATGTA
TTATTCATAATCAATCATCATGCTCGAATAGAGAAAGTATATCGTTAGGTGTCATATAGT
TCTACATGTGTATAGAGCGTACAAATGAATGCAAATCCCGGCGCCTTCGCAGCGATCAGA
TCCTTGGAAATATTTATCGAAGCGATGAAGCAAGCTACTGGAGACGATAACATTCAGGCA
TGAGTGCCGTGCGAAAATAGCCAGCGATGTATCAATGTATTGTAAAGTATTGTCAAATAT
ACGATGAACCCCCCCCAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_8467#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [CCCCCGAGTAGTTAAAAAAGTCACTCAACGTTTATGTTTTCTACTGAATATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGCAGTATGTGTTACGCCGCCAGAACCAGAATGGCTGCTTGTTCTCTGTTTAAACTAACCCTATTTATATAAACACATTCCATACGCGGCAAAGCGATTGCTAACATTGCTAACATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACATTTGCATGAAACGTATTCAACATTATACCGCACACAACGCACTTCTGCTCGCTCTCACNAACATTAACAGCAAACGTTGCTNCNCTCTAACCGGACTTCCATANNGCCTGCATTTCTAACGCTAACATGTGGCTCGACTCAGCATTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATTTAGTGAACGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAGCTCGTATGGCTCTGCACGATCTCTGTGCAACAAACAGATTTGCCAAAGAAGAAAAAGTCCCAAATGAGCNATGTTGTTGACNATAATAATAAGA]

[+] EMBL AL934890             [CCCCCGAGTAGTTAAAAAAGTCACTCAACGTTTATGTTTTCTACTGAATATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGCAGTATGTGTTACGCCGCCAGAACCAGAATGGCTGCTTGTTCTCTGTTTAAACTAACCCTATTTATATAAACACATTCCATACGCGGCAAAGCGATTGCTAACATTGCTAACATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACATTTGCATGAAACGTATTCAACATTATACCGCACACAACGCACTTCTGCTCGCTCTCACNAACATTAACAGCAAACGTTGCTNCNCTCTAACCGGACTTCCATANNGCCTGCATTTCTAACGCTAACATGTGGCTCGACTCAGCATTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATTTAGTGAACGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAGCTCGTATGGCTCTGCACGATCTCTGTGCAACAAACAGATTTGCCAAAGAAGAAAAAGTCCCAAATGAGCNATGTTGTTGACNATAATAATAAGA]




>consensus_8467#1
CCCCCGAGTAGTTAAAAAAGTCACTCAACGTTTATGTTTTCTACTGAATATTACTGAATC
GGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAAAAGC
ACATATCAATATTTTAATCAAGTTGGCAGTATGTGTTACGCCGCCAGAACCAGAATGGCT
GCTTGTTCTCTGTTTAAACTAACCCTATTTATATAAACACATTCCATACGCGGCAAAGCG
ATTGCTAACATTGCTAACATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGG
GCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACATTTGC
ATGAAACGTATTCAACATTATACCGCACACAACGCACTTCTGCTCGCTCTCACNAACATT
AACAGCAAACGTTGCTNCNCTCTAACCGGACTTCCATANNGCCTGCATTTCTAACGCTAA
CATGTGGCTCGACTCAGCATTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATTTAGTG
AACGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAGCTCGTATGGCTCTGCA
CGATCTCTGTGCAACAAACAGATTTGCCAAAGAAGAAAAAGTCCCAAATGAGCNATGTTG
TTGACNATAATAATAAGA

consensusID : consensus_8467#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 486
fasta sequence

                              [CCAGAATCGCCACGAGGTTAGTTACAAATTGATTTCGTTAGCAAGGGATGCCACGAGGCGAAAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTCTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTNTTAAATAAGCTATTTATATAAGACACAT]

[+] EMBL BX466485             [CCAGAATCGCCACGAGGTTAGTTACAAATTGATTTCGTTAGCAAGGGATGCCACGAGGCGAAAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTCTTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTNTTAAATAAGCTATTTATATAAGACACAT]




>consensus_8467#2
CCAGAATCGCCACGAGGTTAGTTACAAATTGATTTCGTTAGCAAGGGATGCCACGAGGCG
AAAAAAGAAAATGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGC
ATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCC
TTGAGTAGAAGTCAGTCAGGCGCACATCTCAACCATTTATCAAACAACTCAAAGCAAAAC
AGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGT
TTTCTAGCTGAATAATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTC
TTTATTCTATTTCAGTCAACGAAAAGCACATATCAATATTTTAATCAAGTTGGAGTATGT
GTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGTNTTAAATAAGCTATTTATATAAG
ACACAT

consensusID : consensus_8467#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 351
fasta sequence

                              [TTCTCACCTCGTGGCATCCCTTCTAACGAAAATGCCGCGGAAAAAGTATCAGTAAGATAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGCCAGTCAGGCGCACATCTCAACCATCTTTCAAACAACGCAAAGCATAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATA]

[+] EMBL AGA280174            [TTCTCACCTCGTGGCATCCCTTCTAACGAAAATGCCGCGGAAAAAGTATCAGTAAGATAGACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAATAGTTCCTTGAGTAGAAGCCAGTCAGGCGCACATCTCAACCATCTTTCAAACAACGCAAAGCATAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAAAAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATA]




>consensus_8467#3
TTCTCACCTCGTGGCATCCCTTCTAACGAAAATGCCGCGGAAAAAGTATCAGTAAGATAG
ACGATTGTGTGAAATAATTGCATTTCAAAGAAACATTCCCATCACTGTTTTTCGTTCTGC
TCGAACAAGCGCAATAGTTCCTTGAGTAGAAGCCAGTCAGGCGCACATCTCAACCATCTT
TCAAACAACGCAAAGCATAACAGGTCCACAAGTCAGGGAAACAGTGTTCAGGTTTTAAAA
AAGTTCACTCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGCTCTGCAGAACA
GCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAAAAGCACATA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TATGATTCTTTCCAGCATTCCTGTCTACTTCATATTTATTGCGTGGCGAAACAAACCTAA 60
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      ATGGTTCAACCGCTCGATGGGTGGAATTACGCAGAGTTTACAAAAGTTAATGATGGTGGT 120
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      GCGGCCAAAACAGAAATAAGCGCGAAAAGTGGGTCTTACACGGTTCCTCCAAAAAATGCT 180
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      CATGGTCGTAGGAAAGACCAAACCAGCTCAGGTTTAAACAAACATGCATCCATACGATCA 240
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TACGAACACACCGTTGCCATCATTTGCTGTGTATGCCGACCAAAACGAGGATAGAGCCAT 300
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TCCAGCTCTACATTCCAGAACGGCGCAGAAGTAGTAGTGAGAAAGGATTAGAGCGATCTT 360
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TATGTTGTTTTAAAACGTTTTTTTTTAATTTGTGCTTGTTTGATCGTCCCATCCCTTGCT 420
consensus_8467#1      ----CCCCCGAGTAGTTAAAAAAGTCACTCAACGTTTATGTTTTCTACTGAATATTACTG 56
                                                                                  

consensus_8467#2      -------------------------------------------------CCAGAATCGCC 11
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      GAAGGCTGTTAAAATGTATTCGTTTCTTTTAAAGTAATTATTATATTATGTTCTAACAAT 480
consensus_8467#1      AATCGGCTCTGCAGAACAGCTACTGGCTTTTACTTTTTTTATTCTATTTCAGTCAACGAA 116
                                                                                  

consensus_8467#2      ACGAGGTTAGTTACAAATTGATTTCGTTAGCAAGGGATGCCACGAGGCGAAAAAAGAAAA 71
consensus_8467#3      --------------------------TTCTCACCTCGTGGCATCC--CTTCTAACGAAAA 32
consensus_8467#0      TTGACGTCAGTTACAAATTGATTTCGTTAG-AAGGGATGCCACGAGGCGAAAAAAGAAAA 539
consensus_8467#1      AAGCACATATCAATATTTTAATCAAGTTGGCAGTATGTGTTACGCCGCCAGAACCAGAAT 176
                                                **   *     **  *     *    *    ** 

consensus_8467#2      TGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTT----CAA 127
consensus_8467#3      TGCCGCGGAAAAAGTATCAGTAAGATAGACGATTGTGTGAAATAATTGCATTT----CAA 88
consensus_8467#0      TGCCGCGGAAAAAGTATCAGTAAGACAGACGATTGTGTGAAATAATTGCATTT----CAA 595
consensus_8467#1      GGCTGCTTGTTCTCTGTTTAAACTAACCCTATTTATATAAACACATTCCATACGCGGCAA 236
                       ** **        * *    *  *       ** * * **   *** ***      ***

consensus_8467#2      AGA-------AACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAA-TAGTTC 179
consensus_8467#3      AGA-------AACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAA-TAGTTC 140
consensus_8467#0      AGA-------AACATTCCCATCACTGTTTTTCGTTCTGCTCGAACAAGCGCAA-TAGTTC 647
consensus_8467#1      AGCGATTGCTAACATTGCTAACATTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAA 296
                      **        ****** * * ** * **    ** **     *       *** **    

consensus_8467#2      CTTGAGTAGAAGTCAGTCAGGCGCACATCTC-----AACCATTTAT--CAAACAACTCAA 232
consensus_8467#3      CTTGAGTAGAAGCCAGTCAGGCGCACATCTC-----AACCATCTTT--CAAACAACGCAA 193
consensus_8467#0      CTTGAGTAGAAGTCAGTCAGGCGCACATCTC-----AACCATTTAT--CAAACAACTCAA 700
consensus_8467#1      ACGGGCAAAAAGCTATACAATTGCAAACCTATTTAAAATTAACTACTGCAAACCAAACAT 356
                         *   * ***  *  **   *** * **      **  *  *    ***** *  ** 

consensus_8467#2      A-GCAAAACAGGTCCACAA----GTCAGGGAAACAGTGTTCA-------GGTTTTAAAAA 280
consensus_8467#3      A-GCATAACAGGTCCACAA----GTCAGGGAAACAGTGTTCA-------GGTTTTAAAAA 241
consensus_8467#0      A-GCAAAACAGGTCCACAA----GTCAGGGAAACAGTGTTCA-------GGTTTTAAAAA 748
consensus_8467#1      TTGCATGAAACGTATTCAACATTATACCGCACACAACGCACTTCTGCTCGCTCTCACNAA 416
                        ***  * * **   ***     *   * * ***  *  *        * * * *  **

consensus_8467#2      AGTTCAC--TCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGC-TCTGCAGAA 337
consensus_8467#3      AGTTCAC--TCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGC-TCTGCAGAA 298
consensus_8467#0      AGTTCAC--TCAACGTTTATGTTTTCTAGCTGAATAATTACTGAATCGGC-TCTGCAGAA 805
consensus_8467#1      CATTAACAGCAAACGTTGCTNCNCTCTAACCGGACTTCCATANNGCCTGCATTTCTAACG 476
                        ** **    ******  *    **** * * *     *      * ** * *  *   

consensus_8467#2      CAGCTACTGGCTTTTACTTTTTCTTTATTCTATTTCAGTCAACGAAAAGCACATATCAAT 397
consensus_8467#3      CAGCTACTGGCTTTTACTTTTT--TTATTCTATTTCAGTCAACGAAAAGCACATA----- 351
consensus_8467#0      CAGCTACTGGCTTTTACTTTTT-TTTATTCTATTTCAGTCAACGAAAAGCACATATCAAT 864
consensus_8467#1      CTAACATGTGGCTCGACTCAGC-ATTGGTCCACTCGTGTCGAAAGCATTGTAGTCGAATT 535
                      *    *   *  *  ***      **  ** * *   *** *    *      *      

consensus_8467#2      ATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGT 457
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      ATTTTAATCAAGTTGGAGTATGTGTTACGCCGCCAGAACCAGAATGGTGCTTGTTTCTGT 924
consensus_8467#1      TAGTGAACGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAGCTCGTATGGCT 595
                                                                                  

consensus_8467#2      NTTAAATAAGCTATTTATATAAGACACAT------------------------------- 486
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TT-AAATAAGCTATTTATATAAACACATTCCATAGGGGAAAGGATTGCTAAATTGCTAAA 983
consensus_8467#1      CT-GCACGATCTCTGTGCAACAAACAGATTTGCCAAAGAAGAAAAAGTCCCAAATGAGCN 654
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TTATTCCGTGTGCTTGGTAACTGCTAACAAATAAAAAACGGGCAAAAAGCTATACAATTG 1043
consensus_8467#1      ATGTTGTTGACNATAATAATAAGA------------------------------------ 678
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      CAAACCTATTTAAAATTAACTACTGCAAACCAAACATTTGCATGAAACGTATTCAAATTA 1103
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TAGCGAAAAGACTTTGTCGTTTAAAAAATTAACAGAAAGTTGTTTTTAACGGAGCTTCCA 1163
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TAGGCCTGATTTCTAACGTAAATGTGGTCGATCAGCATTGGTCCACTCGTGTCGAAAGCA 1223
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TTGTAGTCGAATTAGTGAAGGAAAGGAAGTGTAAGGAGTAACGCATACATATATGTATAG 1283
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      CTCGTATGGCTCTGCACGATCTCTGTGCAAAAACAGATTTGCAAAGAGAAGAAAAAGTCC 1343
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      CAAATGAGCTATGTTGTTGACAATAATAATAGAAACACAATGTTCGCACGTAAAACCCTG 1403
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      GACGGATATTGGTAGTGGCCCCTGTCGAATACATGTATTATTCATAATCAATCATCATGC 1463
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      TCGAATAGAGAAAGTATATCGTTAGGTGTCATATAGTTCTACATGTGTATAGAGCGTACA 1523
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      AATGAATGCAAATCCCGGCGCCTTCGCAGCGATCAGATCCTTGGAAATATTTATCGAAGC 1583
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      GATGAAGCAAGCTACTGGAGACGATAACATTCAGGCATGAGTGCCGTGCGAAAATAGCCA 1643
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------------------------------------------------
consensus_8467#3      ------------------------------------------------------------
consensus_8467#0      GCGATGTATCAATGTATTGTAAAGTATTGTCAAATATACGATGAACCCCCCCCAAAAAAA 1703
consensus_8467#1      ------------------------------------------------------------
                                                                                  

consensus_8467#2      ------------------
consensus_8467#3      ------------------
consensus_8467#0      AAAAAAAAAAAAAAAAAA 1721
consensus_8467#1      ------------------