cluster # 8478

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Anopheles gambiae
cluster # 8478 cluster # 8478 Sequences # 10 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8478#0 length = 1402 sequences # 6
consensus_8478#1 length = 690 sequences # 1

consensus_8478#2 length = 660 sequences # 1
consensus_8478#3 length = 584 sequences # 1
consensus_8478#4 length = 572 sequences # 1

consensusID : consensus_8478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1402
fasta sequence

                              [CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGTGACGACGATCTACTTTCCTGCTGTCCACTTGTACCAGTTCCACCAGGCAACAGGCAGGTTCGAGCAAGCTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGTGAATGAGAGTGAGAGAGAGAGAGAGCGAGAGCGAGAAAGAGGTGATCGATAAGGAAAGTTATAAAGAGACCGGACAGTAACGCAATGGATCAACGTTTGGGTCAATTTTCTGGCGTAAAGTGGAGTAAACTGCGCATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCATCCATCTGCGCCAGTACGCGCGCTCGTACGTCATCGAGGACGAGAACGGCACGCGGGTGGTGTTCGTCAGCGTCGACGCGGGCATGATGGGGCACGCGGTCAAGCGGGACGTTCTGGCCGTGCTGCAGAAGAAGTACGGCGAGCTGTACACGCACGCGAACGTCGTCATCAGCGGCACGCACACCCACTCGACGCCGGGCGGCTTCCTGATGTACCTACTATACGATCTGACCTCGCTCGGCTTCGTGCCGGAGACGTTCAACGCGCTCGTGCACGGCATCGCGCAGAGCGTCATCCGCGCCCACAACAATCTGGTCGAGGCGCGGCTGTACGTCGCCGAGACGGAGGTGCTCGAGGCAAACATTAACCGCAG-CCCGAGCGCGTACGAGAACAACCCGGAGGAGGAGCGGGCCCAGTACCGCCACAACGTGGACAAGACGCTGGTGCAGCTGCAGTTCGTGCACGCGCGGACCGGCGCACCGTTCGGCGCGATCAACTGGTTCGCCGTCCATCCGACCTCGATGAACAACACGAACCGGTTGGTGTCGAGCGACAACGTCGGGCTGGCAGCGATCCTGCTCGAGCAGGAGCGCAACCCGGACGCGCTCGTCGGCAAGGGCGACTTTGTCGGTGCGTTCGCGTCAAGCAACCTCGGCGACGTGTCGCCCAACATTAATGGACCGAAGTGCGAGAAGACGGGCCTGCCGTGCGATGTGCTCACGTCGTCCTGCCCGTCCGGCGCCGGGGCCTGCTTTGCATCCGGCCCGGGGCGCGACATGTTCGAAAGCACGGAGATCATTGCCGACCGG]

[+] EMBL BM612833             [CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGTGACGACGATCTACTTTCCTGCTGTCCACTTGTACCAGTTCCACCAGGCAACAGGCAGGTTCGAGCAAGCTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGTGAATGAGAGTGAGAGAGAGAGAGAGCGAGAGCGAGAAAGAGGTGATCGATAAGGAAAGTTATAAAGAGACCGGACAGTAACGCAATGGATCAACGTTTGGGTCAATTTTCTGGCGTAAAGTGGAGTAAACTGCGCATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCATCCATCTGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM617397             [                                                                                                                                                                                                                                                                                                                                                                                                                    ccGATCAACGTTTGGGTCAATTTCCTGGCGTAAAGTGGAGTAAACTGCGCATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCATCCATCTGCGCCAGTACGCGCGCTCGTACGTCATCGAGGACGAGAACGGCACGCGGGTGGTGTTCGTCAGCGTCGACGCGGGCATGATGGGGCACGCGGTCAAGCGGGACGTTCTGGCCGTGCTGCAGAAGAAGTACGGCGAGCTGTACACGCACGCGAACGTCGTCATCAGCGGCACGCACACCCACTCGACGCCGGGCGGCTTCCTGATGTACCTACTATACGATCTGACCTCGCTCGGCTTCGTGCCGGAGACGTTCAACGCGCTCGTGCACGGCATCGCGCAGAGCGTCATCCGCGCCCACAACAATCTGGTCGAGGCGCGGCTGTACGTCGCCGAGACGGAGGTGCTCGAGGCAAACATTAACCGCAGCCCCGAGCGCGTACGAGAACAACCCGGAGGAGGAGCGGGCCCAGTACCGCCACAACGTG                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AGA282648            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGCATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCATCCATCTGCGCCAGTACGCGCGCTCGTACGTCATCGAGGACGAGAACGGCACGCGGGTGGTGTTCGTCAGCGTCGACGCGGGCATGATGGGGCACGCGGTCAAGCGGGACGTTCTGGCCGTGCTGCAGAAGAAGTACGGCGAGCTGTACACGCACGCGAACGTCGTCATCAGCGGCACGCACACCCACTCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AGA284810            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCATCCATCTGCGCCAGTACGCGCGCTCGTACGTCATCGAGGACGAGAACGGCACGCGGGTGGTGTTCGTCAGCGTCGACGCGGGCATGATGGGGCACGCGGTCAAGCGGGACGTTCTGGCCGTGCTGCAGAAGAAGTACGGCGAGCTGTACACGCACGCGAACGTCGTCATCAGCGGCACGCACACCCACTCGACGCCGGGCGGCTTCCTGATGTACCTACTGTACGATCTGACCTCTCTCGGCTTCGTGCCGGAGACGTTCAACGCGCTCGTGCACGGCATCGCGCAGAGCGTCATCCGCGCCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AGA283518            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGTGCTCGAGGCAAACATTAACCGCAG CCCGAGCGCGTACGAGAACAACCCGGAGGAGGAGCGGGCCCAGTACCGCCACAACGTGGACAAGACGCTGGTGCAGCTGCAGTTCGTGCACGCGCGGACCGGCGCACCGTTCGGCGCGATCAACTGGTTCGCCGTCCATCCGACCTCGATGAACAACACGAACCGGTTGGTGTCGAGCGACAACGTCGGGCTGGCAGCGATCCTGCTCGAGCAGGAGCGCAACCCGGACGCGCTCGTCGGCAAGGGCGACTTTGTCGGTGCGTTCGCGTCAAGCAACCTCGGCGACGTGTCGCCCAACATTAATGGACCGAAGTGCGAGAAGACGGGCCTGCCGTGCGATGTGCTCACGTCGTCCTGCCCGTCCGGCGCCGGGGCCTGCTTTGCATCCGGCCCGGGGCGCGACATGTTCGAAAGCACGGAGATCATTGCCGACCGG]
[-] EMBL AGA281020            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATTAACCGCAG CCCGAGCGCGTACGAGAACAACCCGGAGGAGGAGCGGGCCCAGTACCGCCACAACGTGGACAAGACGCTGGTGCAGCTGCAGTTCGTGCACGCGCGGACCGGCGCACCGTTCGGCGCGATCAACTGGTTCGCCGTCCATCCGACCTCGATGAACAACACGAACCGGTTGGTGTCGAGCGACAACGTCGGGCTGGCAGCGATCCTGCTCGAGCAGGAGCGCAACCCGGACGCGCTCGTCGGCAAGGGCGACTTTGTCGGTGCGTTCGCGTCAAGCAACCTCGGCGACGTGTCGCCCAACATTAATGGACCGAAGTGCGAGAAGACGGGCCTGCCGTGCGATGTGCTCACGTCGTCCTGCCCGTCCGGCGCCGGGGCCTGCTTTGCATCCGGCCCGGGGCGCGACATGTTCGAAAGCACGGAGATCATTGCCGACCGG]




>consensus_8478#0
CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGTGACGACGATCTACTTT
CCTGCTGTCCACTTGTACCAGTTCCACCAGGCAACAGGCAGGTTCGAGCAAGCTTCCCCA
GAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGT
CGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCAC
AGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAG
AGAGAGAGAGAGAGAGAGTGAATGAGAGTGAGAGAGAGAGAGAGCGAGAGCGAGAAAGAG
GTGATCGATAAGGAAAGTTATAAAGAGACCGGACAGTAACGCAATGGATCAACGTTTGGG
TCAATTTTCTGGCGTAAAGTGGAGTAAACTGCGCATGGCGCTGGCCGTTCTGGCCCTAGC
AATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTC
GGTGGAAATAACGTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCATCCATCT
GCGCCAGTACGCGCGCTCGTACGTCATCGAGGACGAGAACGGCACGCGGGTGGTGTTCGT
CAGCGTCGACGCGGGCATGATGGGGCACGCGGTCAAGCGGGACGTTCTGGCCGTGCTGCA
GAAGAAGTACGGCGAGCTGTACACGCACGCGAACGTCGTCATCAGCGGCACGCACACCCA
CTCGACGCCGGGCGGCTTCCTGATGTACCTACTATACGATCTGACCTCGCTCGGCTTCGT
GCCGGAGACGTTCAACGCGCTCGTGCACGGCATCGCGCAGAGCGTCATCCGCGCCCACAA
CAATCTGGTCGAGGCGCGGCTGTACGTCGCCGAGACGGAGGTGCTCGAGGCAAACATTAA
CCGCAGCCCGAGCGCGTACGAGAACAACCCGGAGGAGGAGCGGGCCCAGTACCGCCACAA
CGTGGACAAGACGCTGGTGCAGCTGCAGTTCGTGCACGCGCGGACCGGCGCACCGTTCGG
CGCGATCAACTGGTTCGCCGTCCATCCGACCTCGATGAACAACACGAACCGGTTGGTGTC
GAGCGACAACGTCGGGCTGGCAGCGATCCTGCTCGAGCAGGAGCGCAACCCGGACGCGCT
CGTCGGCAAGGGCGACTTTGTCGGTGCGTTCGCGTCAAGCAACCTCGGCGACGTGTCGCC
CAACATTAATGGACCGAAGTGCGAGAAGACGGGCCTGCCGTGCGATGTGCTCACGTCGTC
CTGCCCGTCCGGCGCCGGGGCCTGCTTTGCATCCGGCCCGGGGCGCGACATGTTCGAAAG
CACGGAGATCATTGCCGACCGG

consensusID : consensus_8478#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 690
fasta sequence

                              [CCGCGGACGCGTGGGTCGGTGAATAGCGTTCGAAACGATTATGATCAGTTTGATTCCGCACGGCATCGGGTGAAGTGTTGGGAGTTGAATTTAGCAAAAAACAAAAGTGAAAATAGAAACAAAGTTTCTAGAAAAGTAGATTAACAAAAACAAACTTCCAGTGCTGTAAATTTCAAACGGGAAGAAACCCAAAACGCGCAACGAACGATCCTGTATGCGGTTGTGAATATCGGGAGTGCGTGTCCCGTTCCGTGCAACATCAGCGTGTCCGGAAGGGACAGCATGAAACAGTTCGGGAAGTGCAGTTATTATTCAGCATCATCAGCAGCAGCAGTAGTTGTACAGCCAACCAATCAGAATCATACGGTACAGCTGCCTCCAGGAGGTCCGGAACGCCAGCACGGTGCAATCTGTGACGCCGTCCGTTTCGTGCGGTGATCCAACGCTTCCCAGAGCAGCTCCAGAGAACATGGCCATCGCCTGCTGTGTCGACCGAAGTTAAGTGATTCGTGGCAAACGTGCGTGTATGTGTGTGTAAATTATTTTCCTACTGCGTAGTAGGCTCTGGGATCTATTTCAGCAGTAGTGGAGCCAAACGAGCGAAGAGTCTATTAAACAAAGTGAAAATACATCTCTGGAATAAAAAGGCTTGGAAGAGTGTGAAATATAATCAGAAGTAGTGATATCCAA]

[+] EMBL BM609541             [CCGCGGACGCGTGGGTCGGTGAATAGCGTTCGAAACGATTATGATCAGTTTGATTCCGCACGGCATCGGGTGAAGTGTTGGGAGTTGAATTTAGCAAAAAACAAAAGTGAAAATAGAAACAAAGTTTCTAGAAAAGTAGATTAACAAAAACAAACTTCCAGTGCTGTAAATTTCAAACGGGAAGAAACCCAAAACGCGCAACGAACGATCCTGTATGCGGTTGTGAATATCGGGAGTGCGTGTCCCGTTCCGTGCAACATCAGCGTGTCCGGAAGGGACAGCATGAAACAGTTCGGGAAGTGCAGTTATTATTCAGCATCATCAGCAGCAGCAGTAGTTGTACAGCCAACCAATCAGAATCATACGGTACAGCTGCCTCCAGGAGGTCCGGAACGCCAGCACGGTGCAATCTGTGACGCCGTCCGTTTCGTGCGGTGATCCAACGCTTCCCAGAGCAGCTCCAGAGAACATGGCCATCGCCTGCTGTGTCGACCGAAGTTAAGTGATTCGTGGCAAACGTGCGTGTATGTGTGTGTAAATTATTTTCCTACTGCGTAGTAGGCTCTGGGATCTATTTCAGCAGTAGTGGAGCCAAACGAGCGAAGAGTCTATTAAACAAAGTGAAAATACATCTCTGGAATAAAAAGGCTTGGAAGAGTGTGAAATATAATCAGAAGTAGTGATATCCAA]




>consensus_8478#1
CCGCGGACGCGTGGGTCGGTGAATAGCGTTCGAAACGATTATGATCAGTTTGATTCCGCA
CGGCATCGGGTGAAGTGTTGGGAGTTGAATTTAGCAAAAAACAAAAGTGAAAATAGAAAC
AAAGTTTCTAGAAAAGTAGATTAACAAAAACAAACTTCCAGTGCTGTAAATTTCAAACGG
GAAGAAACCCAAAACGCGCAACGAACGATCCTGTATGCGGTTGTGAATATCGGGAGTGCG
TGTCCCGTTCCGTGCAACATCAGCGTGTCCGGAAGGGACAGCATGAAACAGTTCGGGAAG
TGCAGTTATTATTCAGCATCATCAGCAGCAGCAGTAGTTGTACAGCCAACCAATCAGAAT
CATACGGTACAGCTGCCTCCAGGAGGTCCGGAACGCCAGCACGGTGCAATCTGTGACGCC
GTCCGTTTCGTGCGGTGATCCAACGCTTCCCAGAGCAGCTCCAGAGAACATGGCCATCGC
CTGCTGTGTCGACCGAAGTTAAGTGATTCGTGGCAAACGTGCGTGTATGTGTGTGTAAAT
TATTTTCCTACTGCGTAGTAGGCTCTGGGATCTATTTCAGCAGTAGTGGAGCCAAACGAG
CGAAGAGTCTATTAAACAAAGTGAAAATACATCTCTGGAATAAAAAGGCTTGGAAGAGTG
TGAAATATAATCAGAAGTAGTGATATCCAA

consensusID : consensus_8478#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 660
fasta sequence

                              [AGATGCGTACGGGACACAACAGGCCATCGCACTGACGAGTTAGTCCGTTGAATTTAATTTTGGAACGTATTGGGACAGCGATTTGAAAGGCTTTGGTTGTTTTGGTGGGTGTTTTTTAACGTTGTTACTACTGCTTTATCAGTGCTCAATCTGCCAGGTGTGAGCGTGTGTTAGCACGGCAACAGCAGCAACGGTTTAACGCGCAGCACTATCATTACGAATTAGTATTGTCCACCGGTCATAAGGGGTAGCGTTCCGTACCGCGTATCCGCCGCGTTATCGAACCGGAAACAACTGTCCCAGCATGGTTTTGGGGCGGAGCGTGCAACGCGCGGAAGATGCGCAAAGCGGGAGGAATGATTTGCATGCGTGACATATTAGCGCAGCAGGCGCACCGTCTCGACGCTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCATAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAGAAACCCAAAACGCGCAACAAACGATCCTGTATGCGGTTGTGAATATCGGGAGTGCGTGTCCCGTTCCGTGCAACAT]

[+] EMBL BX622576             [AGATGCGTACGGGACACAACAGGCCATCGCACTGACGAGTTAGTCCGTTGAATTTAATTTTGGAACGTATTGGGACAGCGATTTGAAAGGCTTTGGTTGTTTTGGTGGGTGTTTTTTAACGTTGTTACTACTGCTTTATCAGTGCTCAATCTGCCAGGTGTGAGCGTGTGTTAGCACGGCAACAGCAGCAACGGTTTAACGCGCAGCACTATCATTACGAATTAGTATTGTCCACCGGTCATAAGGGGTAGCGTTCCGTACCGCGTATCCGCCGCGTTATCGAACCGGAAACAACTGTCCCAGCATGGTTTTGGGGCGGAGCGTGCAACGCGCGGAAGATGCGCAAAGCGGGAGGAATGATTTGCATGCGTGACATATTAGCGCAGCAGGCGCACCGTCTCGACGCTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCATAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAGAAACCCAAAACGCGCAACAAACGATCCTGTATGCGGTTGTGAATATCGGGAGTGCGTGTCCCGTTCCGTGCAACAT]




>consensus_8478#2
AGATGCGTACGGGACACAACAGGCCATCGCACTGACGAGTTAGTCCGTTGAATTTAATTT
TGGAACGTATTGGGACAGCGATTTGAAAGGCTTTGGTTGTTTTGGTGGGTGTTTTTTAAC
GTTGTTACTACTGCTTTATCAGTGCTCAATCTGCCAGGTGTGAGCGTGTGTTAGCACGGC
AACAGCAGCAACGGTTTAACGCGCAGCACTATCATTACGAATTAGTATTGTCCACCGGTC
ATAAGGGGTAGCGTTCCGTACCGCGTATCCGCCGCGTTATCGAACCGGAAACAACTGTCC
CAGCATGGTTTTGGGGCGGAGCGTGCAACGCGCGGAAGATGCGCAAAGCGGGAGGAATGA
TTTGCATGCGTGACATATTAGCGCAGCAGGCGCACCGTCTCGACGCTTCCCCAGAGTCGA
ACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACG
GTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCATAGCATTC
AACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAGAAACCCAAAACGCGCA
ACAAACGATCCTGTATGCGGTTGTGAATATCGGGAGTGCGTGTCCCGTTCCGTGCAACAT

consensusID : consensus_8478#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 584
fasta sequence

                              [CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGTGACGACGATCTACTTTCCTGCTGTCCACTTGTACCAGTTCCACCAGACAACAGGCAGGTTCGAGCAAGCTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAGAGAGAGAGTGAATGAGAGTGAGAGAGAGAGAGAGCGAGAGCGAGAAAGAGGCGATCGATAAAGAAAGTTATAAAGAGACCGGACAGTAACGCAATGGATCAACGTTTGGGTCAAATTCCTGGCGTAAAGTGGAGTAAACTGCGTATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCA]

[+] EMBL BM584488             [CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGTGACGACGATCTACTTTCCTGCTGTCCACTTGTACCAGTTCCACCAGACAACAGGCAGGTTCGAGCAAGCTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAGAGAGAGAGTGAATGAGAGTGAGAGAGAGAGAGAGCGAGAGCGAGAAAGAGGCGATCGATAAAGAAAGTTATAAAGAGACCGGACAGTAACGCAATGGATCAACGTTTGGGTCAAATTCCTGGCGTAAAGTGGAGTAAACTGCGTATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATAACGTTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCA]




>consensus_8478#3
CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGTGACGACGATCTACTTT
CCTGCTGTCCACTTGTACCAGTTCCACCAGACAACAGGCAGGTTCGAGCAAGCTTCCCCA
GAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGT
CGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCAC
AGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAG
AGAGAGAGTGAATGAGAGTGAGAGAGAGAGAGAGCGAGAGCGAGAAAGAGGCGATCGATA
AAGAAAGTTATAAAGAGACCGGACAGTAACGCAATGGATCAACGTTTGGGTCAAATTCCT
GGCGTAAAGTGGAGTAAACTGCGTATGGCGCTGGCCGTTCTGGCCCTAGCAATCGGTACG
ACCGGCGCATATCGAGTCGGTGTAGGCCGCGCGGACTGCACTGGGCCGTCGGTGGAAATA
ACGTTTTATGGGTTACGCGCAGGTGACGCAGCGCGGAACCGGCA

consensusID : consensus_8478#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 572
fasta sequence

                              [CCGTGCCTGCTGCCTGCTGTTTGCTATTTCGTATCCAGCGCGAGCCTAACACAACGAGCCCTTGCTCACACACGCACACACGTTCGCACGAGAGGCACAAGAAAGCTTGTGTTATTGTTATTTGGTGCGAGTGTCCACAGTGGTACCCCGAAAACGGAGGCCCTTGTCAAGGATTCTCAAAAATCCTGAGCTGGACTCAATACAAACGTAGGCGTATGTGTGTGTGTGTGTGTGTGCTCGAGAAACAAAGAACGCAAAATCAGATCAACGGGTGCATCCAGCAACTGCAATCAACTGAGACTTGGCGCACAGATCGTGTTGCTGCTGATGCGGCTGCTACAAAAATGCCCAAATCAATACTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA]

[+] EMBL BM610856             [CCGTGCCTGCTGCCTGCTGTTTGCTATTTCGTATCCAGCGCGAGCCTAACACAACGAGCCCTTGCTCACACACGCACACACGTTCGCACGAGAGGCACAAGAAAGCTTGTGTTATTGTTATTTGGTGCGAGTGTCCACAGTGGTACCCCGAAAACGGAGGCCCTTGTCAAGGATTCTCAAAAATCCTGAGCTGGACTCAATACAAACGTAGGCGTATGTGTGTGTGTGTGTGTGTGCTCGAGAAACAAAGAACGCAAAATCAGATCAACGGGTGCATCCAGCAACTGCAATCAACTGAGACTTGGCGCACAGATCGTGTTGCTGCTGATGCGGCTGCTACAAAAATGCCCAAATCAATACTTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACGCACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA]




>consensus_8478#4
CCGTGCCTGCTGCCTGCTGTTTGCTATTTCGTATCCAGCGCGAGCCTAACACAACGAGCC
CTTGCTCACACACGCACACACGTTCGCACGAGAGGCACAAGAAAGCTTGTGTTATTGTTA
TTTGGTGCGAGTGTCCACAGTGGTACCCCGAAAACGGAGGCCCTTGTCAAGGATTCTCAA
AAATCCTGAGCTGGACTCAATACAAACGTAGGCGTATGTGTGTGTGTGTGTGTGTGCTCG
AGAAACAAAGAACGCAAAATCAGATCAACGGGTGCATCCAGCAACTGCAATCAACTGAGA
CTTGGCGCACAGATCGTGTTGCTGCTGATGCGGCTGCTACAAAAATGCCCAAATCAATAC
TTCCCCAGAGTCGAACGGATCATCCAAGCACAGCAGGTGGCAGTATGCCGGTCATCGACG
CACCGGTCGGTACGGTTTCATCATCGGCACAGTAAAACAGCATCTTCGATCAACCTTTTT
GGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGAGAACGGGAAAGA
AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8478#0      ------CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGT-GACGACGAT 53
consensus_8478#3      ------CCGCACACGTCAACACTCGTGGTGACAGTGCGCGTCGACGGGGT-GACGACGAT 53
consensus_8478#4      -----------------------------------CCGTGCCTGC----T-GCCTGCTGT 20
consensus_8478#2      --------AGATGCGT-ACGGGACACAACAGGCCATCGCACTGACGAGTTAGTCCGTTGA 51
consensus_8478#1      CCGCGGACGCGTGGGTCGGTGAATAGCGTTCGAAACGATTATGATCAGTTTGATT-CCGC 59
                                                                       * *        

consensus_8478#0      CTACTTTCCTGCTGTCCACTTGTACCA-GTTCCACCAGGCAACAGGCAGGTTCGAGCAAG 112
consensus_8478#3      CTACTTTCCTGCTGTCCACTTGTACCA-GTTCCACCAGACAACAGGCAGGTTCGAGCAAG 112
consensus_8478#4      TTGCTATTTCG-TATCCA---GCGCGA-GCCTAAC---ACAACGAGCCCTTGCTCACACA 72
consensus_8478#2      ATTTAATTTTGGAACGTATTGGGACAGCGATTTGAAAGGCTTTGGTTGTTTTGGTGGGTG 111
consensus_8478#1      ACGGCATCGGGTGAAGTGTTGGGAGTTGAATTTAGCAAAAAACAAAAGTGAAAATAGAAA 119
                            *   *          *                                      

consensus_8478#0      CTTCCCCAGAGTCGAACGGATCATCCA--AGCACAGCAGGTGGCAG-TAT-GCCGGTCAT 168
consensus_8478#3      CTTCCCCAGAGTCGAACGGATCATCCA--AGCACAGCAGGTGGCAG-TAT-GCCGGTCAT 168
consensus_8478#4      CGCACACACGTTCGCACGAGAGGCACA--AG-AAAGCTTGTGTTAT-TGTTATTTGGTGC 128
consensus_8478#2      TTTTTTAACGTTGTTACTACTGCTTTATCAGTGCTCAATCTGCCAGGTGTGAGCGTGTGT 171
consensus_8478#1      CA---AAGTTTCTAGAAAAGTAGATTAACAA-AAACAAACTTCCAG-TGC-TGTAAATTT 173
                                     *          *  *          *   *  *            

consensus_8478#0      CGAC---GCACCGGTCGGTACGGTTTCATCATCGGCACAGTA----AAACAGCATCTTCG 221
consensus_8478#3      CGAC---GCACCGGTCGGTACGGTTTCATCATCGGCACAGTA----AAACAGCATCTTCG 221
consensus_8478#4      GAGT---GTCCACAGTGGTAC--CCCGAAAACGGAGGCCCTT----GTCAAGGATTCTCA 179
consensus_8478#2      TAGCACGGCAACAGCAGCAACGGTTTAACGCGCAGCACTATC----ATTACGAATT---- 223
consensus_8478#1      CAAACGGGAAGAAACCCAAAACGCGCAACGAACGATCCTGTATGCGGTTGTGAATATCGG 233
                             *           *       *         *  *          * **     

consensus_8478#0      ATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGA 281
consensus_8478#3      ATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGACATACAGA 281
consensus_8478#4      AAAATCCTGAGCTGGACTCA--ATACAAACGTAGGCGTATGTGTGTGTGTG-TGTGT-GT 235
consensus_8478#2      AGTATTGTCCACCGGTCATAAGGGGTAG-CGTTCCGTACCGCGTATCCGCCGCGT-TATC 281
consensus_8478#1      GAGTGCGTGTCCCGTTCC----GTGCAACATCAGCGTGTCCGGAAGGGACAGCATGAAAC 289
                             *     *  *         *               *           *     

consensus_8478#0      GAACGGGAAAGAAAGAGAGAGAGAGAGAGAGA--GAG-AGTGAAT---GAGAGTGAG-AG 334
consensus_8478#3      GAACGGGAAAGAAAGAGAGAGAGAGA-------------GTGAAT---GAGAGTGAG-AG 324
consensus_8478#4      GCTCGAGAAACAAAGAACGCAAAATCAGATCA--ACG-GGTGCATCCAGCAACTGCA-AT 291
consensus_8478#2      GAACCGGAAACAACTGTCCCAGCATGGTTTTG--GGGCGGAGCGTGCAACGCGCGGA-AG 338
consensus_8478#1      AGTTCGGGAAGTGCAGTTATTATTCAGCATCATCAGCAGCAGCAGTAGTTGTACAGCCAA 349
                            * **                               *                * 

consensus_8478#0      AGAGAGAGAGCGAGAGCGAGAAAGAGGTGATCGATAAGGAAA---GTTATAAAGAGACCG 391
consensus_8478#3      AGAGAGAGAGCGAGAGCGAGAAAGAGGCGATCGATAAAGAAA---GTTATAAAGAGACCG 381
consensus_8478#4      CAACTGAGACTTGGCGCACAGATCGTGTTGCTGCTGATGCGGC-TGCTACAAAAATGCCC 350
consensus_8478#2      ATGCGCAAAGCGGGAGGAATGATTTGCATGCGTGACATATTAG-CGCAGCAGGCGCACCG 397
consensus_8478#1      CCAATCAGAATCATACGGTACAGCTGCCTCCAGGAGGTCCGGAACGCCAGCACGGTGCAA 409
                            * *            *                       *           *  

consensus_8478#0      GA--CAGTAACGCAA---TGGATCAACGTTTGGGT-CAATTTTCTGGCGTAAAGTGGAGT 445
consensus_8478#3      GA--CAGTAACGCAA---TGGATCAACGTTTGGGT-CAAATTCCTGGCGTAAAGTGGAGT 435
consensus_8478#4      AAATCAATACTTCCC---CAGAGT--CGAACGGAT-CATCCAAGCACAGCAGGTGGCAGT 404
consensus_8478#2      TC-TCGACGCTTCCC---CAGAGT--CGAACGGAT-CATCCAAGCACAGCAGGTGGCAGT 450
consensus_8478#1      TCTGTGACGCCGTCCGTTTCGTGCGGTGATCCAACGCTTCCCAGAGCAGCTCCAGAGAAC 469
                                          *      *        *           *        *  

consensus_8478#0      AAACTGCGCATG-G---CGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGC----G 497
consensus_8478#3      AAACTGCGTATG-G---CGCTGGCCGTTCTGGCCCTAGCAATCGGTACGACCGGC----G 487
consensus_8478#4      ATGCCGGTCATC-GACGCACCGGTCGGTACGGTTTCATCA-TCGGCACAGTAAAACA--G 460
consensus_8478#2      ATGCCGGTCATC-GACGCACCGGTCGGTACGGTTTCATCA-TCGGCACAGTAAAACA--G 506
consensus_8478#1      ATGGCCATCGCCTGCTGTGTCGACCGAAGTTAAGTGATTCGTGGCAAACGTGCGTGTATG 529
                      *            *       *  **          *    * *  *            *

consensus_8478#0      CATATCGAGTCGG--TGTAGGCCGCGCGG-ACTGCACTGGGCCGTCGGTGGAAATAACGT 554
consensus_8478#3      CATATCGAGTCGG--TGTAGGCCGCGCGG-ACTGCACTGGGCCGTCGGTGGAAATAACGT 544
consensus_8478#4      CATCTTCGATCAACCTTTTTGGAGCACAGCATTCAACCAAACCACAACAAGAGTCTGTGA 520
consensus_8478#2      CATCTTCGATCAACCTTTTTGGAGCATAGCATTCAACCAAACCACAACAAGAGTCTGTGA 566
consensus_8478#1      TGTGTGTAAATTATTTTCCTACTGCGTAGTAGGCTCTGGGATCTATTTCAGCAGTAGTGG 589
                        * *          *       **   * *           *       *       * 

consensus_8478#0      TT-ATGGGTTACGCGCAGGTGAC-GCAGCGCGGAACCGGCATCCATCTGCGCCAGTACGC 612
consensus_8478#3      TTTATGGGTTACGCGCAGGTGAC-GCAGCGCGGAACCGGCA------------------- 584
consensus_8478#4      CATACAGAGAACGGGAAAGAAAG-AGAGAGAGAGAGAGAGAGAGAGAGAGAGA------- 572
consensus_8478#2      CATACAGAGAACGGGAAGAAACCCAAAACGCGCAACAAACGATCCTGTATGCGGTTGTGA 626
consensus_8478#1      AGCCAAACGAGCG---AAGAGTCTATTAAACAAAGTGAAAATACATCTCTGGAATAAAAA 646
                                 **   *                                           

consensus_8478#0      GCGCTCGTACGTCATCGAGGACGAGAACGGCACGCGGGTGGTGTTCGTCAGCGTCGACGC 672
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ATATCGGGAGTGCGTGTCCCGTTCCGTGCAACAT-------------------------- 660
consensus_8478#1      GGCTTGGAAGAGTGTGAAATATAATCAGAAGTAGTGATATCCAA---------------- 690
                                                                                  

consensus_8478#0      GGGCATGATGGGGCACGCGGTCAAGCGGGACGTTCTGGCCGTGCTGCAGAAGAAGTACGG 732
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CGAGCTGTACACGCACGCGAACGTCGTCATCAGCGGCACGCACACCCACTCGACGCCGGG 792
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CGGCTTCCTGATGTACCTACTATACGATCTGACCTCGCTCGGCTTCGTGCCGGAGACGTT 852
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CAACGCGCTCGTGCACGGCATCGCGCAGAGCGTCATCCGCGCCCACAACAATCTGGTCGA 912
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      GGCGCGGCTGTACGTCGCCGAGACGGAGGTGCTCGAGGCAAACATTAACCGCAGCCCGAG 972
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CGCGTACGAGAACAACCCGGAGGAGGAGCGGGCCCAGTACCGCCACAACGTGGACAAGAC 1032
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      GCTGGTGCAGCTGCAGTTCGTGCACGCGCGGACCGGCGCACCGTTCGGCGCGATCAACTG 1092
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      GTTCGCCGTCCATCCGACCTCGATGAACAACACGAACCGGTTGGTGTCGAGCGACAACGT 1152
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CGGGCTGGCAGCGATCCTGCTCGAGCAGGAGCGCAACCCGGACGCGCTCGTCGGCAAGGG 1212
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CGACTTTGTCGGTGCGTTCGCGTCAAGCAACCTCGGCGACGTGTCGCCCAACATTAATGG 1272
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      ACCGAAGTGCGAGAAGACGGGCCTGCCGTGCGATGTGCTCACGTCGTCCTGCCCGTCCGG 1332
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      CGCCGGGGCCTGCTTTGCATCCGGCCCGGGGCGCGACATGTTCGAAAGCACGGAGATCAT 1392
consensus_8478#3      ------------------------------------------------------------
consensus_8478#4      ------------------------------------------------------------
consensus_8478#2      ------------------------------------------------------------
consensus_8478#1      ------------------------------------------------------------
                                                                                  

consensus_8478#0      TGCCGACCGG 1402
consensus_8478#3      ----------
consensus_8478#4      ----------
consensus_8478#2      ----------
consensus_8478#1      ----------