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Anopheles gambiae
cluster # 8491 cluster # 8491       Sequences # 10       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8491#0 length = 1560 sequences # 5  
consensus_8491#1 length = 1137 sequences # 4  
consensus_8491#2 length = 518 sequences # 1  

consensusID : consensus_8491#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1560
fasta sequence
                              [CCGTGCGAAACGATTAAAAGCTTAACACGCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCCTGTCATTTCCCGGGGGCGGATTCGGTGTTGGTGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAAT-CCT-GTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGA-TTATT-GAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGT-TGGGGATTCTTACTGTAATCCTGAGCCTTAATGT-TGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAA--TTG-GTTTAATAG-GTCCGTACATGAGATACGTGTGGATTAGTGATACGGAGGATACGGTGGTTAACGGCGGATGGATATTGNGAACATGGACTACGGTGGATATGGTGGATATGGTGGATACGNGTTGGCTACCGGGTGTGTTACGGACATGGCTATGGAATACTAACCGACGAAAGNTGCGAACATATCTTTCGCTCCGCCTGCTCATAANCCGGTCTTGGATAAANTTTGACNGCACTTCACANNCGGAACCTNNCACACGCAGGAANACGCTNTGCCGGNNAANNTCCTTGGGNTCNTGGATGGGAATACGGTTATCCACACGCTTAACCANAGGTAATATCGGCATACGCGTTAAAANCAGCGACTCTATTCTATGACATTAGTACGNTCCCAACAACNCTCCGCGCTTTGGCCCCTTTTAACTACANTNGGGGANCAACAGCNNTATCACGGTTGACGGACCAAGGATTTCATCTGGGACAGAAAACAAAACCCCCCCCCCCTCATNCATCAAACANCAACAANGACTTGCAAAAACCCAACCCTCTACACTAACACAACACCCTCACACAANAAAAAACANACANACTCAAACAACCCTTCTCACTTCACANCACACTCTACCTCAACAGCTCAANTTCTCGCTTNNATTACCTCTTCCTAACCACACTACACCCCCTACACACAAAACTTCCCANTAAATTACACCTTATAAATCCCATANACACACAAAACCNAACACAACACAACACCACCCANACACACNCACGCCCCCACTCGACCTCTTNC]

[+] EMBL BM637832             [CCGTGCGAAACGATTAAAAGCTTAACACGCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCCTGTCATTTCCCGGGGGCGGATTCGGTGTTGGTGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATAATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCTGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAAT CCT GTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGA TTATT GAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGT TGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM622637             [     ccgAACGATTAAAAGCTTAACACGCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCCTGTCATTTCCCGGGGGCGGATTCGGTGTTGGTGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAAT CCTGGTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGATTTATT GAAGAGTTCGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM632313             [                ccgGCTTAACACGCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTTTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGAACTCCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCCTGGTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGATTTATTGGAAGAGTTCGGAAAGCAATCGTCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX625294             [                                                      TTGCTTGTGGTTTTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGAACTCCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAAT CCT GTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGA TTATT GAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGT TGGGGATTCTTACTGTAATCCTGAGCCTTAATGT TGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAA  TTG GTTTAATAG GTCCGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AL695604             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 cgcaggtt aTATT GAAGAG TCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGTATGGGGATTCTTACTGTAATCCTGAGCCTTAATGTNTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAACTTTGTGTTTAATAGTGTCCGTACATGAGATACGTGTGGATTAGTGATACGGAGGATACGGTGGTTAACGGCGGATGGATATTGNGAACATGGACTACGGTGGATATGGTGGATATGGTGGATACGNGTTGGCTACCGGGTGTGTTACGGACATGGCTATGGAATACTAACCGACGAAAGNTGCGAACATATCTTTCGCTCCGCCTGCTCATAANCCGGTCTTGGATAAANTTTGACNGCACTTCACANNCGGAACCTNNCACACGCAGGAANACGCTNTGCCGGNNAANNTCCTTGGGNTCNTGGATGGGAATACGGTTATCCACACGCTTAACCANAGGTAATATCGGCATACGCGTTAAAANCAGCGACTCTATTCTATGACATTAGTACGNTCCCAACAACNCTCCGCGCTTTGGCCCCTTTTAACTACANTNGGGGANCAACAGCNNTATCACGGTTGACGGACCAAGGATTTCATCTGGGACAGAAAACAAAACCCCCCCCCCCTCATNCATCAAACANCAACAANGACTTGCAAAAACCCAACCCTCTACACTAACACAACACCCTCACACAANAAAAAACANACANACTCAAACAACCCTTCTCACTTCACANCACACTCTACCTCAACAGCTCAANTTCTCGCTTNNATTACCTCTTCCTAACCACACTACACCCCCTACACACAAAACTTCCCANTAAATTACACCTTATAAATCCCATANACACACAAAACCNAACACAACACAACACCACCCANACACACNCACGCCCCCACTCGACCTCTTNC]


>consensus_8491#0 CCGTGCGAAACGATTAAAAGCTTAACACGCAGGATGAAACCCGCGGTACACTGTTTGCTT GTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAG AGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCCTGTCATTTCCCGGGGGCGGATTC GGTGTTGGTGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGGTTTATCTTTCAA CGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAA CATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCG GAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAG ATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTGT ATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAAC GCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCATT CGTCTTACAACCGGATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCC TAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCTTA ATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAATTGGTTTAATAG GTCCGTACATGAGATACGTGTGGATTAGTGATACGGAGGATACGGTGGTTAACGGCGGAT GGATATTGNGAACATGGACTACGGTGGATATGGTGGATATGGTGGATACGNGTTGGCTAC CGGGTGTGTTACGGACATGGCTATGGAATACTAACCGACGAAAGNTGCGAACATATCTTT CGCTCCGCCTGCTCATAANCCGGTCTTGGATAAANTTTGACNGCACTTCACANNCGGAAC CTNNCACACGCAGGAANACGCTNTGCCGGNNAANNTCCTTGGGNTCNTGGATGGGAATAC GGTTATCCACACGCTTAACCANAGGTAATATCGGCATACGCGTTAAAANCAGCGACTCTA TTCTATGACATTAGTACGNTCCCAACAACNCTCCGCGCTTTGGCCCCTTTTAACTACANT NGGGGANCAACAGCNNTATCACGGTTGACGGACCAAGGATTTCATCTGGGACAGAAAACA AAACCCCCCCCCCCTCATNCATCAAACANCAACAANGACTTGCAAAAACCCAACCCTCTA CACTAACACAACACCCTCACACAANAAAAAACANACANACTCAAACAACCCTTCTCACTT CACANCACACTCTACCTCAACAGCTCAANTTCTCGCTTNNATTACCTCTTCCTAACCACA CTACACCCCCTACACACAAAACTTCCCANTAAATTACACCTTATAAATCCCATANACACA CAAAACCNAACACAACACAACACCACCCANACACACNCACGCCCCCACTCGACCTCTTNC



consensusID : consensus_8491#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1137
fasta sequence
                              [GCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGT-CGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCTTAATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAGTTGGATTGATAGGTCCGTACAGCGGATACGGTGGATTAGGATACGGAGGATACGGTGGTTACGGCGGAGGATATGGGCATGGCTACGGTGGATATGGTGGATATGGTGGATACGGTGGCTACGGTGGCTACGGGCATGGCTACGGATACTACCGACGAAGACGACCATTCTTCGCTCCGCCTGCTATATTGGTTGGATAAGTTGAGCAGAAGGGAACTAAAAGAGAGAGCTGCGAAAATCTGTTTGTGATCGTTAAACTACAAGTATTGCTCGTAAACGATTGTTGAATG---------TCGGTTACCATTATAATGGAACAGTTTAGTGAGCCAGTTTTAGGAGAAACCCCTTTCACAAAGTGAACACTATAAAATTAAGAAAAATAAATTATAATATATTGGGGGTATGTAATAAAATTACTAAAAAT]

[+] EMBL BX620780             [GCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGT CGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCTTAGTATAGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAGTTGGATTGATAGGTCCGTACAGCGGATACGGNGG                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX626965             [                                                                                                                                                                                                                                                                                                                                      CTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTACGTGTATGTTTTCGGAAGCGTGNTTGTAAAGCCTGTTACGACNATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGNTATTTAAATCCTGTTCCGGTGNTTTCGCCGATTTCATTCGTCTTACAACCGGATTATTGAAGAGATCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCT AATCACAAAATGAAGTGCGTCGAGTTGTTGGGGATTCNTACTGTAATCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM614190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgCAACCGGATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCTTAATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAGTTGGATTGATAGGTCCGTACAGCGGATACGGTGGATTAGGATACGGAGGATACGGTGGTTACGGCGGAGGATATGGGCATGGCTACGGTGGATATGGTGGATATGGTGGATACGGTGGCTACGGTGGCTACGGGCATGGCTACGGATACTACCGACGAAGACGACCATTCTTCGCTCCGCCTGCTATATTGGTTGGATAAGTTGAGCAGAAGGGAACTAAAAGAGAGAGCTGCGAAAATCTGTTTGTGATCGTTAAACTACAAGTATTGCTCGTAAACGATTGTTGAATG         TCGGTTACCATTATAATGGAACAGTTTAGTGAGCCAGTTTTAGGAGAAACCCCTTTCACAAAGTGAACACTATAAAATTAAGAAAAATAAATTATAATATATTGGGGGTATGTAATAAAATTACT      ]
[+] EMBL BM629658             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgCCGGATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCTTAATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAATTGGTTTAATAGGTCCGTACAGCAGATACGGTGGATTAGGATACGGAGGATACGGTGGTTACGGCGGAGGATATGGACATGGCTACGGTGGATATGGTGGATATGGTGGATACGGTGGCTACGGTGGTTACGGACATGGCTATGGATACTACCGACGAAGGCGACCATTCTTCGCTCCGCCTGCTATTTTGGTTGGATAAATTGAGCATAAGGGAACTAAAAGAGAGAGCTGCGAAAATCTGTTTGTGATCGTTCAACTACAAGTATTGCTCGTAAACGATTATTGAATGTCGTCCAACTCGGTTGCCTTAATAATGGAACAGTTTAGTGAGACAGTTTTTGGAGAAACCCCTTTTAAAAAGTGAACACTATAAAGTTAAGAAAAATAAATTATAAAAT TTTGTATTGTGTAATAAAATTACTAAAAAT]


>consensus_8491#1 GCAGGATGAAACCCGCGGTACACTGTTTGCTTGTGGTTCTAGTGTTTGGTGTAGTGATTG GAGAGGATCAACTTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGAT CACCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTC GTTACCGTAGTATACCAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCT CCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCT TCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCA TCATCCAGATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTC TGTCGTGTATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGA AAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCG ATTTCATTCGTCTTACAACCGGATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAA CTTTTTCCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCT GAGCCTTAATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAGTTGG ATTGATAGGTCCGTACAGCGGATACGGTGGATTAGGATACGGAGGATACGGTGGTTACGG CGGAGGATATGGGCATGGCTACGGTGGATATGGTGGATATGGTGGATACGGTGGCTACGG TGGCTACGGGCATGGCTACGGATACTACCGACGAAGACGACCATTCTTCGCTCCGCCTGC TATATTGGTTGGATAAGTTGAGCAGAAGGGAACTAAAAGAGAGAGCTGCGAAAATCTGTT TGTGATCGTTAAACTACAAGTATTGCTCGTAAACGATTGTTGAATGTCGGTTACCATTAT AATGGAACAGTTTAGTGAGCCAGTTTTAGGAGAAACCCCTTTCACAAAGTGAACACTATA AAATTAAGAAAAATAAATTATAATATATTGGGGGTATGTAATAAAATTACTAAAAAT



consensusID : consensus_8491#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 518
fasta sequence
                              [GATCCCCCGAGGTTATTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTCGCTACCGTAGTATACCAGGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACCATCTCATCTCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGCATTATTGAAGAGTTCGGAAAGCAATC]

[+] EMBL AL694800             [GATCCCCCGAGGTTATTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATACTCGCTACCGTAGTATACCAGGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACCATCTCATCTCAAGCCATCTCATCGTCTCTGTCGTGTATGTTTTCGGAAGCGTGTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCATTCGTCTTACAACCGGCATTATTGAAGAGTTCGGAAAGCAATC]


>consensus_8491#2 GATCCCCCGAGGTTATTGGCGCGATCGCACACGAGAGAGGGAACGTTGTACGAGAACGTA GATCACCGTTCTTGTCATTTCCCGGGGGCGGATTCGGTGTTGGAGTTCGATACGATGATA CTCGCTACCGTAGTATACCAGGGGTTTATCTTTCAACGATATGAAGGATACTACGGAAGC CGAATTCCCGATGCGTATGTCAACATCTCCGACTAACATCACTGCACAGAATGATGAGTT CCGATAAACAAATGGCGCATTACGTTCTTCGTCTCGGAACTTTGTCGTTTCACGCTTCCC AGCTAGCTTCCCTTCCTCGACCATCTCATCTCAAGCCATCTCATCGTCTCTGTCGTGTAT GTTTTCGGAAGCGTGTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAACGCT TCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCATTCGT CTTACAACCGGCATTATTGAAGAGTTCGGAAAGCAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8491#0      CCGTGCGAAACGATTAAAAGCTTAACACGCAGGATGAAACCCGCGGTACACTGTTTGCTT 60
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ----------------------------GCAGGATGAAACCCGCGGTACACTGTTTGCTT 32
                                                                                  

consensus_8491#0      GTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAG 120
consensus_8491#2      -----------------------GATCCCCCGAGGTTA--TTGGCGCGATCGCACACGAG 35
consensus_8491#1      GTGGTTCTAGTGTTTGGTGTAGTGATTGGAGAGGATCAACTTGGCGCGATCGCACACGAG 92
                                             ***       * * *  ********************

consensus_8491#0      AGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCCTGTCATTTCCCGGGGGCGGATTC 180
consensus_8491#2      AGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCTTGTCATTTCCCGGGGGCGGATTC 95
consensus_8491#1      AGAGGGAACGTTGTACGAGAACGTAGATCACCGTTCTTGTCATTTCCCGGGGGCGGATTC 152
                      ************************************ ***********************

consensus_8491#0      GGTGTTGGTGTTCGATACGATGATACTCGTTACCGTAGTATACCAGGG-TTTATCTTTCA 239
consensus_8491#2      GGTGTTGGAGTTCGATACGATGATACTCGCTACCGTAGTATACCAGGGGTTTATCTTTCA 155
consensus_8491#1      GGTGTTGGAGTTCGATACGATGATACTCGTTACCGTAGTATACCAGG------------- 199
                      ******** ******************** *****************             

consensus_8491#0      ACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTA 299
consensus_8491#2      ACGATATGAAGGATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTA 215
consensus_8491#1      ------------ATACTACGGAAGCCGAATTCCCGATGCGTATGTCAACATCTCCGACTA 247
                                  ************************************************

consensus_8491#0      ACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTC 359
consensus_8491#2      ACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTC 275
consensus_8491#1      ACATCACTGCACAGAATGATGAGTTCCGATAAACAAATGGCGCATTACGTTCTTCGTCTC 307
                      ************************************************************

consensus_8491#0      GGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCA 419
consensus_8491#2      GGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACCATCTCATCT---- 331
consensus_8491#1      GGAACTTTGTCGTTTCACGCTTCCCAGCTAGCTTCCCTTCCTCGACATTCTCATCATCCA 367
                      **********************************************  *******     

consensus_8491#0      GATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTG 479
consensus_8491#2      ----------------------------------CAAGCCATCTCATCGTCTCTGTCGTG 357
consensus_8491#1      GATAAATCGTTATTAGCACCAACATGCCTCGTGGCAAGCCATCTCATCGTCTCTGTCGTG 427
                                                        **************************

consensus_8491#0      TATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAA 539
consensus_8491#2      TATGTTTTCGGAAGCGTGTT-GTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAA 416
consensus_8491#1      TATGTTTTCGGAAGCGTGTTTGTAAAGCCTGTTACGACGATTTGCTTGAGTGAAAATTAA 487
                      ******************** ***************************************

consensus_8491#0      CGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCAT 599
consensus_8491#2      CGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCAT 476
consensus_8491#1      CGCTTCTCTCATCTCGGCTTGGCTATTTAAATCCTGTTCCGGTGTTTTCGCCGATTTCAT 547
                      ************************************************************

consensus_8491#0      TCGTCTTACAACCGG-ATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTT 658
consensus_8491#2      TCGTCTTACAACCGGCATTATTGAAGAGTTCGGAAAGCAATC------------------ 518
consensus_8491#1      TCGTCTTACAACCGG-ATTATTGAAGAGTTCGGAAAGCAATCGTCTGGAGTGAACTTTTT 606
                      *************** **************************                  

consensus_8491#0      CCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCT 718
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      CCTAAATCACAAAATGAAGTGCGTCGTGTTGTTGGGGATTCTTACTGTAATCCTGAGCCT 666
                                                                                  

consensus_8491#0      TAATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAATTGGTTTAAT 778
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      TAATGTTGTACCGACACAGTCAAACCCTGTGCCACAGATTGGATTTGGAGTTGGATTGAT 726
                                                                                  

consensus_8491#0      AGGTCCGTACATGAGATACGTGTGGATTAGTGATACGGAGGATACGGTGGTTAACGGCGG 838
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      AGGTCCGTACAGCGGATACG-GTGGATTAG-GATACGGAGGATACGGTGGTTA-CGGCGG 783
                                                                                  

consensus_8491#0      ATGGATATTGNGAACATGGACTACGGTGGATATGGTGGATATGGTGGATACGNGTTGGCT 898
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      A-GGATA---TGGGCATGG-CTACGGTGGATATGGTGGATATGGTGGATACGG--TGGCT 836
                                                                                  

consensus_8491#0      ACCGGGTGTGTTACGGACATGGCTATGGAATACTAACCGACGAAAGNTGCGAACATATCT 958
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      AC--GGTG-GCTACGGGCATGGCTACGGA-TACTA-CCGACGAAGACGAC-----CATTC 886
                                                                                  

consensus_8491#0      TTCGCTCCGCCTGCTCATAANCCGGTCTTGGATAAANTTTGACNGCACTTCACANNCGGA 1018
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      TTCGCTCCGCCTGCT---ATATTGGT--TGGATAAGTTGAG-----------CAGAAGGG 930
                                                                                  

consensus_8491#0      ACCTNNCACACGCAGGAANACGCTNTGCCGGNNAANNTCCTTGGGNTCNTGGATGGGAAT 1078
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      AACTAA-------AAGAGAGAGCTGCG----AAAATCTGTTTGTGATCGTTAA----ACT 975
                                                                                  

consensus_8491#0      ACGGTTATCCACACGCTTAACCANAGGT-AATATCGGCATACGCGTTAAAANCAGCGACT 1137
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ACAAGTATT-GCTCG-TAAACGATTGTTGAATGTCGGT-TACCATTATAATGGAACAGTT 1032
                                                                                  

consensus_8491#0      CTATTCTATGACATTAGTACGNTCCCAACAACNCTCCGCGCTTTGGCCCCTTTTAACTAC 1197
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      TAGTGAGCCAGTTTTAGGAGAAACCC------CTTTCACAAAGTGAACACTATAAA---- 1082
                                                                                  

consensus_8491#0      ANTNGGGGANCAACAGCNNTATCACGGTTGACGGAC-CAAGGATTTCATCTGGGACAGAA 1256
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      -ATTAAGAAAAATAAATTATAATATATTGGGGGTATGTAATAAAATTACTAAAAAT---- 1137
                                                                                  

consensus_8491#0      AACAAAACCCCCCCCCCCTCATNCATCAAACANCAACAANGACTTGCAAAAACCCAACCC 1316
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ------------------------------------------------------------
                                                                                  

consensus_8491#0      TCTACACTAACACAACACCCTCACACAANAAAAAACANACANACTCAAACAACCCTTCTC 1376
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ------------------------------------------------------------
                                                                                  

consensus_8491#0      ACTTCACANCACACTCTACCTCAACAGCTCAANTTCTCGCTTNNATTACCTCTTCCTAAC 1436
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ------------------------------------------------------------
                                                                                  

consensus_8491#0      CACACTACACCCCCTACACACAAAACTTCCCANTAAATTACACCTTATAAATCCCATANA 1496
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ------------------------------------------------------------
                                                                                  

consensus_8491#0      CACACAAAACCNAACACAACACAACACCACCCANACACACNCACGCCCCCACTCGACCTC 1556
consensus_8491#2      ------------------------------------------------------------
consensus_8491#1      ------------------------------------------------------------
                                                                                  

consensus_8491#0      TTNC 1560
consensus_8491#2      ----
consensus_8491#1      ----
                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)