cluster # 8493

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Anopheles gambiae
cluster # 8493 cluster # 8493 Sequences # 10 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8493#0 length = 1404 sequences # 7
consensus_8493#1 length = 830 sequences # 1

consensus_8493#2 length = 618 sequences # 1
consensus_8493#3 length = 534 sequences # 1

consensusID : consensus_8493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1404
fasta sequence

                              [CCGGTTGCTGTGAGTGTGACTGCCACGGCAGCCTCCATCGGTGCGGCTGGTATTCCGCAAGCTGGACTTATCACGATGGTCATGGTGCTGGACACTGTAGGTTTGCCGGCCGAGGATGTTACCATCATTATTGCCGTCGATTGGCTGCTCGATCGATTCCGTACGACTATTAACGTTATGTGTGACGCCCTGGGAACGATTCTGGTCAACTCACTTTCCAAAAAGGATCTATCCGGTGATGCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAGAAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCGTCATCCCCGGAGCATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCGCATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAATAGTAGCGGATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATT-TAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGC-TTTCCATCACTTTCTTACCATTT-AACAAAAGCCAAAAAGCTCCCTCAAAG-TCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAG-GAGTATGTACCCCGTGTGCCATGGC--AACAA-T-ATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACCGGTTCGGTTAGGGGCAAAGCATCACTTTCATCTGACCCGATTGTGTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACACACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAGCACGATCACTTTGCAGCAAGGCGCGCGCGGCATCATTTAGGGGACAGAACCGCGCACTGTAAAAGCGCAGGACCACTCACCCGCTCAACTGACCAGGATACCGATATACGTGGTACGTGAAGCAACGTGAGGCTTGTGGCTCCACCGCATGCCCCCCCATCACTCTCATCACATCAGCGCATCAGCGGGGAATATCGATGTTTGTATGTAAACATATCAAAAT]

[+] EMBL BM632213             [CCGGTTGCTGTGAGTGTGACTGCCACGGCAGCCTCCATCGGTGCGGCTGGTATTCCGCAAGCTGGACTTATCACGATGGTCATGGTGCTGGACACTGTAGGTTTGCCGGCCGAGGATGTTACCATCATTATTGCCGTCGATTGGCTGCTCGATCGATTCCGTACGACTATTAACGTTATGTGTGACGCCCTGGGAACGATTCTGGTCAACTCACTTTCCAAAAAGGATCTATCCGGTGATGCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAGAAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCGTCATCCCCGGAGCATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCGCATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX628257             [                                                                                                                                                                                            CCTGGGAACGATTCTGGTCAACTCACTTTCCAAAAAGGATCTATCCGGTGATGCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAGAAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCGTCATCCCCGGAGCATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCGCATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAATAGTAGCGGATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATT TAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX615531             [                                                                                                                                                                                                                                                                                                                             ACCATCCCGTTTCATCGCGGGTCCCTCACCGTCATCCCCGGAGCATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCGCATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX616661             [                                                                                                                                                                                                                                                                                                                                                GGTCCCTCACCGTCATCCCCGGAGCATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCGCATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAATAGTAGCGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL931871             [                                                                                                                                                                                                                                                                                                                                                                                   ccgagGTTTATTTCATCGCCACTTTA AACGCGCACTTTC TTTTGCGCATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAG TTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAATAGTAGCGGATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATTCTAAGAGTGGAAAGACGTTTTCCA CTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTG CCTTCAATTTTCGC TTTCCATCACTTTCTTACCATTTCAACAAAAGCCAAAAAGCTCCCTCAAAGCTCAGGCGGAAGTGTAGTGGACGTACGTGTGTAGAGAGAGCGAGTATGTACCCCGTGTGCCATGGCCAAACAACTNATGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX612694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAATAGTAGCGGATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATT TAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGCTTTTCCATCACTTTCTTACCATTT AACAAAAGCCAAAAAGCTCCCTCAAAG TCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAG GAGTATGTACCCCGTGTGCCATGGC  AACAA T ATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACCGGTTCGGTTAGGGGCAAAGCATCACTTTCATCTGACCCGATTGTGTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACACACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAGCACGATCACTTTGCAGCAAGGCGCGCGCGGCATCATTTAGGGGACAGAACCGCGCACTGTAAAAGCGCAGGACCACTCACCCGCTCAACTGACCAGGATACCGATATACG                                                                                                                 ]
[+] EMBL BM639287             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgATT TAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGC TTTCCATCACTTTCTTACCATTT AACAAAAGCCAAAAAGCTCCCTCAAAG TCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAG GAGTATGTACCCCGTGTGCCATGGC  AACAA T ATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACCGGTTCGGTTAGGGGCAAAGCATCACTTTCATCTGACCCGATTGTGTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACACACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAGCACGATCACTTTGCAGGAAGGCGCGCGCGGCATCATTTAGGGGACAGAACCGCGCACTGTAAAAGCGCAGGACCACTCACCCGCTCAACTGACCAGGATACCGATATACGTGGTACGTGAAGCAACGTGAGGCTTGTGGCTCCACCGCATGCCCCCCCATCACTCTCATCACATCAGCGCATCAGCGGGGAATATCGATGTTTGTATGTAAACATATCAAAAT]




>consensus_8493#0
CCGGTTGCTGTGAGTGTGACTGCCACGGCAGCCTCCATCGGTGCGGCTGGTATTCCGCAA
GCTGGACTTATCACGATGGTCATGGTGCTGGACACTGTAGGTTTGCCGGCCGAGGATGTT
ACCATCATTATTGCCGTCGATTGGCTGCTCGATCGATTCCGTACGACTATTAACGTTATG
TGTGACGCCCTGGGAACGATTCTGGTCAACTCACTTTCCAAAAAGGATCTATCCGGTGAT
GCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAG
AAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCGTCATCCCCGGAG
CATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCGC
ATTTCGGCGCACGTGCCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACA
GTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAG
AAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGC
GCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATT
GATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAATAGTAGCGGATAG
AAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATTTAAGAGTGGAAAG
ACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTT
CAATTTTCGCTTTCCATCACTTTCTTACCATTTAACAAAAGCCAAAAAGCTCCCTCAAAG
TCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAGGAGTATGTACCCCGTGTGCCA
TGGCAACAATATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACCGGT
TCGGTTAGGGGCAAAGCATCACTTTCATCTGACCCGATTGTGTTTACCGTGTTTATTAAA
CTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACACACATAACAGTATATCTAT
GTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAGCACGATCACTTTGCAGCAA
GGCGCGCGCGGCATCATTTAGGGGACAGAACCGCGCACTGTAAAAGCGCAGGACCACTCA
CCCGCTCAACTGACCAGGATACCGATATACGTGGTACGTGAAGCAACGTGAGGCTTGTGG
CTCCACCGCATGCCCCCCCATCACTCTCATCACATCAGCGCATCAGCGGGGAATATCGAT
GTTTGTATGTAAACATATCAAAAT

consensusID : consensus_8493#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 830
fasta sequence

                              [CCCGGCATTAACTCCCTCAAAGTCAGGCGGCAGTGTTTGGACGTANGTGTGTAGAGAGAGGAGTATGTACCCCGTGTGCCATGGGCAACAATATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACCGGTTCGGTTAGTGGGCAAAGCATCACTTTCATCTGACCCGATTGTGTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACACACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAGCACGATCACTTTGCAGCAAGGGCGCGCGCGGCATCATTTAGGGGACAGAACCGAGCACTGTAAAAGCGCAGGACACTCACCCGACTCAATGACCAGGATACCGATATACGTGGTACGTGAGAGCAATGTGAGAGCCATGTGGACTCCANCGAATGACCACCCACCCACCCCATCACTCTCATACANATCAGCGNCATTCAAAGGGGAGATATCGACGTAGGAATAGTAAACACTATCCAACTATCGAGTNNAATCACCAAACACCTAATAAGTNCCGACGGATCATACGGCCAGGCCGCAAATGTTCCCCACCCAAACAAATTTACAAANCCTNACTNANTGCANAGCTANCCCGGCGCAAAGACGCCGAATCCACAGTATANACAAGTACACANCGANAGNAGCAGCAAGACGACCATANATCACACANCAGGAAATNTNTCAGNNNCCNCAACGCCTATATACCCCANCTACANNNCNGGGTNAAACAANTCAGCTNTGGCACACTGNCCCTGANGTNACTANA]

[+] EMBL AL695985             [CCCGGCATTAACTCCCTCAAAGTCAGGCGGCAGTGTTTGGACGTANGTGTGTAGAGAGAGGAGTATGTACCCCGTGTGCCATGGGCAACAATATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACCGGTTCGGTTAGTGGGCAAAGCATCACTTTCATCTGACCCGATTGTGTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACACACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAGCACGATCACTTTGCAGCAAGGGCGCGCGCGGCATCATTTAGGGGACAGAACCGAGCACTGTAAAAGCGCAGGACACTCACCCGACTCAATGACCAGGATACCGATATACGTGGTACGTGAGAGCAATGTGAGAGCCATGTGGACTCCANCGAATGACCACCCACCCACCCCATCACTCTCATACANATCAGCGNCATTCAAAGGGGAGATATCGACGTAGGAATAGTAAACACTATCCAACTATCGAGTNNAATCACCAAACACCTAATAAGTNCCGACGGATCATACGGCCAGGCCGCAAATGTTCCCCACCCAAACAAATTTACAAANCCTNACTNANTGCANAGCTANCCCGGCGCAAAGACGCCGAATCCACAGTATANACAAGTACACANCGANAGNAGCAGCAAGACGACCATANATCACACANCAGGAAATNTNTCAGNNNCCNCAACGCCTATATACCCCANCTACANNNCNGGGTNAAACAANTCAGCTNTGGCACACTGNCCCTGANGTNACTANA]




>consensus_8493#1
CCCGGCATTAACTCCCTCAAAGTCAGGCGGCAGTGTTTGGACGTANGTGTGTAGAGAGAG
GAGTATGTACCCCGTGTGCCATGGGCAACAATATGACGCGACAATAGCAAAAGTAGGCGA
ACAAAACCCATTTTTGACCGGTTCGGTTAGTGGGCAAAGCATCACTTTCATCTGACCCGA
TTGTGTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCA
AACACACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGC
AAAGCACGATCACTTTGCAGCAAGGGCGCGCGCGGCATCATTTAGGGGACAGAACCGAGC
ACTGTAAAAGCGCAGGACACTCACCCGACTCAATGACCAGGATACCGATATACGTGGTAC
GTGAGAGCAATGTGAGAGCCATGTGGACTCCANCGAATGACCACCCACCCACCCCATCAC
TCTCATACANATCAGCGNCATTCAAAGGGGAGATATCGACGTAGGAATAGTAAACACTAT
CCAACTATCGAGTNNAATCACCAAACACCTAATAAGTNCCGACGGATCATACGGCCAGGC
CGCAAATGTTCCCCACCCAAACAAATTTACAAANCCTNACTNANTGCANAGCTANCCCGG
CGCAAAGACGCCGAATCCACAGTATANACAAGTACACANCGANAGNAGCAGCAAGACGAC
CATANATCACACANCAGGAAATNTNTCAGNNNCCNCAACGCCTATATACCCCANCTACAN
NNCNGGGTNAAACAANTCAGCTNTGGCACACTGNCCCTGANGTNACTANA

consensusID : consensus_8493#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence

                              [CCGCCCACGCGTCCGCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAGAAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCCTCACCCCGGAGCATATAGAGAACAATAGAGTTAACTTCATCGCCGCTTTAGAACGCGCACCTTCTTTTTGCGCATTTCGGCGCACGTGGCACACGAGTCGATACGTACAACTTGTACGTAGTAATTGCACACAGTTTGGACATGTCCTCAATGCAGAAAATACACACACACACACACACGATGGTGTAGGAGTCTCTCTGCTGCTACTAGGCGTACGATTGTGCCACGAAGCACGTGTTTCGAAAAAGCGCGCAGAGATTGGAGCGTAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAAAGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATTAACAGTAGCGGATAGAAAACGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGTGGGCATTTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGCTTTTCCAT]

[+] EMBL BM641936             [CCGCCCACGCGTCCGCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAGAAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCCTCACCCCGGAGCATATAGAGAACAATAGAGTTAACTTCATCGCCGCTTTAGAACGCGCACCTTCTTTTTGCGCATTTCGGCGCACGTGGCACACGAGTCGATACGTACAACTTGTACGTAGTAATTGCACACAGTTTGGACATGTCCTCAATGCAGAAAATACACACACACACACACACGATGGTGTAGGAGTCTCTCTGCTGCTACTAGGCGTACGATTGTGCCACGAAGCACGTGTTTCGAAAAAGCGCGCAGAGATTGGAGCGTAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAAAGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATTAACAGTAGCGGATAGAAAACGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGTGGGCATTTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGCTTTTCCAT]




>consensus_8493#2
CCGCCCACGCGTCCGCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAAC
TCCGACCCGACCAGAAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCAC
CCTCACCCCGGAGCATATAGAGAACAATAGAGTTAACTTCATCGCCGCTTTAGAACGCGC
ACCTTCTTTTTGCGCATTTCGGCGCACGTGGCACACGAGTCGATACGTACAACTTGTACG
TAGTAATTGCACACAGTTTGGACATGTCCTCAATGCAGAAAATACACACACACACACACA
CGATGGTGTAGGAGTCTCTCTGCTGCTACTAGGCGTACGATTGTGCCACGAAGCACGTGT
TTCGAAAAAGCGCGCAGAGATTGGAGCGTAAACGTTGGCGCATGCGATGGCAACTAGATT
GATGCAAAGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATTAACAGTAGCGGATAG
AAAACGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGTGGGCATTTAAGAGTGGAAAG
ACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTT
CAATTTTCGCTTTTCCAT

consensusID : consensus_8493#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 534
fasta sequence

                              [AAGAATCCCCCGAGGTTNGCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAACTAGTANNCGGATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATTTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGCTTTTCCATCACTTTCTTACCATTTAACAAAAGCCAAAAAGCTCCCTCAAAGTCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAGGAGTATGTA]

[+] EMBL AL933116             [AAGAATCCCCCGAGGTTNGCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCACACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTGTAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAACTAGTANNCGGATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATTTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTGCCCTTCAATTTTCGCTTTTCCATCACTTTCTTACCATTTAACAAAAGCCAAAAAGCTCCCTCAAAGTCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAGGAGTATGTA]




>consensus_8493#3
AAGAATCCCCCGAGGTTNGCACACGAGTCGATACGTAAAACTTGTACGTAGTAATTGCAC
ACAGTTTTGACATGTCCTCAATGCAGAAAATACACACAAACACACACACACACGATGGTG
TAGAAGTCTCTCTGCTGCTGCTAGGCGTACGATTGCGCCACGAAGCACGTGCTTCGAAAA
AGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCATGCGATGGCAACTAG
ATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAACTAGTANNCG
GATAGAAAATGTCGCCTTGTTTCTTTCTCTCTATCTATCTTTCGAGGGCATTTAAGAGTG
GAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTACCACACACTG
CCCTTCAATTTTCGCTTTTCCATCACTTTCTTACCATTTAACAAAAGCCAAAAAGCTCCC
TCAAAGTCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAGGAGTATGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      CCGGTTGCTGTGAGTGTGACTGCCACGGCAGCCTCCATCGGTGCGGCTGGTATTCCGCAA 60
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      GCTGGACTTATCACGATGGTCATGGTGCTGGACACTGTAGGTTTGCCGGCCGAGGATGTT 120
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      ACCATCATTATTGCCGTCGATTGGCTGCTCGATCGATTCCGTACGACTATTAACGTTATG 180
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ----------------------------------------------CCGCCCACGCGTCC 14
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      TGTGACGCCCTGGGAACGATTCTGGTCAACTCACTTTCCAAAAAGGATCTATCCGGTGAT 240
consensus_8493#1      -----------------------------------CCCGGCATTAACTCCCTCAAAGTCA 25
                                                                                  

consensus_8493#2      GCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAG 74
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      GCCAACGGCCATCTGGAACTGGCTGAACCACACGAACTGGTAGAACTCCGACCCGACCAG 300
consensus_8493#1      GGCGGCAGTGTTTGGACGTANGTGTGTAGAGAGAGGAGTATGTACCCCGTGTGCCATGGG 85
                                                                                  

consensus_8493#2      AAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCCTCACCCCGGAGC 134
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      AAGGAATAAGTGTGTCCACCATCCCGTTTCATCGCGGGTCCCTCACCGTCATCCCCG-GA 359
consensus_8493#1      CAACAATATGACGCGACAATAGCAAAAGTAGGCGAACAAAACCCATTTTTGACC-GGTTC 144
                                                                                  

consensus_8493#2      ATATAGAGAACAATAGAGTTAACTTCATCGCCGCTTTAGAACGCGCACCTTCTTTTTGCG 194
consensus_8493#3      ----------------------------------------------------------AA 2
consensus_8493#0      GCATATGGAACAATAGAGTTAATTTCATCGCCACTTTAGAACGCGCACTTTCTTTTTGCG 419
consensus_8493#1      GGTTAGTGGGCAA-AGCATCACTTTCATC-TGACCCGATTGTGTTTACCGTGTTTATTAA 202
                                                                                  

consensus_8493#2      CATTTCGGCGCACGTGGCACACGAGTCGATA-CGTACAACTTGTACGTAGTAATTGCACA 253
consensus_8493#3      GAATCCCCCGAGGTTNGCACACGAGTCGATA-CGTAAAACTTGTACGTAGTAATTGCACA 61
consensus_8493#0      CATTTCGGCGCACGTGCCACACGAGTCGATA-CGTAAAACTTGTACGTAGTAATTGCACA 478
consensus_8493#1      ACTATTAGTGTAAGTCAC-CACGCGCAAGTAACAAACCAAACACACATAACAGTATATCT 261
                               *    *  * **** *    ** *  *  *     ** **  * *    * 

consensus_8493#2      CAGTTTGGACATGTCCT-CAATGCAGAAAATACAC----ACACACACACACACGATGGTG 308
consensus_8493#3      CAGTTTTGACATGTCCT-CAATGCAGAAAATACACACAAACACACACACACACGATGGTG 120
consensus_8493#0      CAGTTTTGACATGTCCT-CAATGCAGAAAATACACACAAACACACACACACACGATGGTG 537
consensus_8493#1      ATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCA-AAGCACGATCACTTTGCAG 320
                        **     **   * * *  *** *    *        * *  ***   ***  **  *

consensus_8493#2      TAGGAGT-CTCTCTGCTGCTACTAGGCG-TACGATTGTGCCACG---AAGCACGTGTTTC 363
consensus_8493#3      TAGAAGT-CTCTCTGCTGCTGCTAGGCG-TACGATTGCGCCACG---AAGCACGTGCTTC 175
consensus_8493#0      TAGAAGT-CTCTCTGCTGCTGCTAGGCG-TACGATTGCGCCACG---AAGCACGTGCTTC 592
consensus_8493#1      CAAGGGCGCGCGCGGCATCATTTAGGGGACAGAACCGAGCACTGTAAAAGCGCAGGACAC 380
                       *   *  * * * **  *   **** *  *  *  * **   *   **** *  *   *

consensus_8493#2      GAAAAAGCGC-----------GCAGAGATTGGAGCGTAAACGTTGGCGCA-TGCGATGGC 411
consensus_8493#3      GAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCA-TGCGATGGC 234
consensus_8493#0      GAAAAAGCGCAAAGATGGCGCGTAGCGATTGGAGCGAAAACGTTGGCGCA-TGCGATGGC 651
consensus_8493#1      TCACCCGACTCAATGACCAGGATACCGATATACGTG-GTACGTGAGAGCAATGTGAGAGC 439
                        *   *                *  ***    * *   ****  * *** ** **  **

consensus_8493#2      AAC-TAGATTGATGCAAAGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATTAAC-A 469
consensus_8493#3      AAC-TAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAACTA 293
consensus_8493#0      AAC-TAGATTGATGCAATGAAATTTTAATGTTACTTTCTCGCTATTAGAGATATGAAT-A 709
consensus_8493#1      CATGTGGACTCCANCGAATGACCACCCAC-CCACCCCATCACTCTCATACANATCAGC-G 497
                       *  * ** *    * *   *      *    **    ** ** * * * * ** *    

consensus_8493#2      GTAGC-GGATAGAAAACGTCGCCTT--GTTTCTTTCTCTCTATCTATCTTTCGTGGGCAT 526
consensus_8493#3      GTANNCGGATAGAAAATGTCGCCTT--GTTTCTTTCTCTCTATCTATCTTTCGAGGGCAT 351
consensus_8493#0      GTAGC-GGATAGAAAATGTCGCCTT--GTTTCTTTCTCTCTATCTATCTTTCGAGGGCAT 766
consensus_8493#1      NCATTCAAAGGGGAGATATCGACGTAGGAATAGTAAACACTATCCAACTATCGAGTNNAA 557
                        *     *  * * *  *** * *  *  *  *   * ***** * ** *** *   * 

consensus_8493#2      TTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTAC 586
consensus_8493#3      TTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTAC 411
consensus_8493#0      TTAAGAGTGGAAAGACGTTTTCCACCTAATGGCACATCGAATGGGGTTCAAACTGTGTAC 826
consensus_8493#1      TCACCAAACACCTAATAAGTNCCGACGGATCATACGGCCA----GGCCGCAAATGTTCCC 613
                      * *  *        *    * **  *  **   **  * *    **    ** ***   *

consensus_8493#2      CACACA--CTGCCCTTCAA-TTTTCGCTT-TTCCAT------------------------ 618
consensus_8493#3      CACACA--CTGCCCTTCAA-TTTTCGCTT-TTCCATCACTTTCTTACCATTTAACAAAAG 467
consensus_8493#0      CACACA--CTGCCCTTCAA-TTTTCGCTT-T-CCATCACTTTCTTACCATTTAACAAAAG 881
consensus_8493#1      CACCCAAACAAATTTACAAANCCTNACTNANTGCANAGCTANCCCGGCGCAAAGACGCCG 673
                      *** **  *     * ***    *  **     **                         

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      CCAAAAAGCTCCCTCAAAGTCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAGGA 527
consensus_8493#0      CCAAAAAGCTCCCTCAAAGTCAGGCGGAAGTGTGTTGGACGTACGTGTGTAGAGAGAGGA 941
consensus_8493#1      AATCCACAGTATANACAAGTACACANCGANAGNAGCAGCAAGACGACCATANATCACACA 733
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      GTATGTA----------------------------------------------------- 534
consensus_8493#0      GTATGTACCCCGTGTGCCATGGCAACAATATGACGCGACAATAGCAAAAGTAGGCGAACA 1001
consensus_8493#1      NCAGGAAATNTNTCAGNNNCCNCAACGCCTATATACCCCANCTACANNNCNGGGTNAAAC 793
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      AAACCCATTTTTGACCGGTTCGGTTAGGGGCAAAGCATCACTTTCATCTGACCCGATTGT 1061
consensus_8493#1      AANTCAGCTNTGGCACACTGNCCCTGANGTNACTANA----------------------- 830
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      GTTTACCGTGTTTATTAAACTATTAGTGTAAGTCACCACGCGCAAGTAACAAACCAAACA 1121
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      CACATAACAGTATATCTATGTAAGAGCAAAACGTGCGGTGCGGTGTGTGTGTGTGCAAAG 1181
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      CACGATCACTTTGCAGCAAGGCGCGCGCGGCATCATTTAGGGGACAGAACCGCGCACTGT 1241
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      AAAAGCGCAGGACCACTCACCCGCTCAACTGACCAGGATACCGATATACGTGGTACGTGA 1301
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      ------------------------------------------------------------
consensus_8493#3      ------------------------------------------------------------
consensus_8493#0      AGCAACGTGAGGCTTGTGGCTCCACCGCATGCCCCCCCATCACTCTCATCACATCAGCGC 1361
consensus_8493#1      ------------------------------------------------------------
                                                                                  

consensus_8493#2      -------------------------------------------
consensus_8493#3      -------------------------------------------
consensus_8493#0      ATCAGCGGGGAATATCGATGTTTGTATGTAAACATATCAAAAT 1404
consensus_8493#1      -------------------------------------------