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Anopheles gambiae
cluster # 8503 cluster # 8503       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8503#0 length = 1553 sequences # 7  
consensus_8503#1 length = 1007 sequences # 1  
consensus_8503#2 length = 699 sequences # 1  
consensus_8503#3 length = 593 sequences # 1  

consensusID : consensus_8503#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1553
fasta sequence
                              [TCCCCCGACGGTTAACGAGGAAAGCATCACTAA-AAGCTCATATTAACCATGTTACAGGTAAAAAGTGCATTGAACGCTGTTACGGGGACAACTGGTTGACGCCACGGTTATGAAGGTCAATAGCAGAGACGCTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCGGACAGTTGTCTGTAATGATGCTGATACGATAATCGCTTTAATCTTATTCCCACTAATACGCAGATTACTATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATGTTTGTGCGACTGTG-TGCGTGATTGAGATTGAGTGCTTTCTCTTAGTT-TTAAGAGATGATTTGGGGAGGGATTCAATGC-GCAAT-TTTGTAGCAGCTTCTCGCGCTT-TCCGTAGTTACCGCGTAAAGCACG-AGAAGCTGTG-G-AAGGTAACGCAACTAAACTGGG-TTTTCTTATTT-GTCGCTTT-TCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTT-CGCCTGCTGGCTACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTCGCAGCGTAATAATGACGAAATCGCGAAAGAGTTCGTCAAGCTAAAGTCGGAAGCCCGGCAGGAGATTGCGGCTCAGGGTTAAAAGGCAAAAGTTAAACAAAAATATGTCAGTGTTGCGTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAACAAAGAGAGAAAATTAAGAAAAAAA--AACAACAAACACATACACACACAGAAACACAAAACTATCCAACTTACATAAAAACAAACCTAGAGCTCCTAATAAGTAAAAACGAGAGCAGTGAATGAGGGCAGATGTAGTTATGAAAGAAAATAACAGTAAGGTAAACAGTAGCAGAGTAAGACCGTCATTGCGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGAGATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGACCGAGAGAGACAGAGAGTTGTTAAACCAGCAGCAGCAGCAACGCTATACATAACTAATCTTTAACTCTCGACTATATTTCTATTCCTACAATCGAACCATCACTGTGTGTATGTGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATA-GGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGATGTTATAAAGGGAGAGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAGCAGATTTCCGGGAGCTCTCCTTATCCAACCGAAAAACAAAACCAAAATACATATATCTAATGTTGTTTACTCCTCTTACTCTGCGTTACGATGTTATCAGTTACGTTTTGATG]

[+] EMBL AL692472             [TCCCCCGACGGTTAACGAGGAAAGCATCACTAANCNGCTCATATTAACCTTGTTACAGGTAAAAAGTGCATTGAACGCTGTTACGGGGACAACTGGTTGACGCCACGGTTATGAAGGTCAATAGCAGAGACGCTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCGGACAGTTGTCTGTAATGATGCTGATACGATAATCGCTTTAATCTTATTCCCACTAATACGCAGATTACTATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATGTTTGTGCGACTGTGATGCGTGATTGAGATTGAGTGCTTTCTCTTAGTTNTTAAGAGATGATTTGGGGAGGGATTCAATGCNGCAATNANAGTAGCAGCTTCTCGCGCTTNTCCGTAGTTACCGCGTAAAGCACG AGAAGCTGTGCGCAAGGTAACGCAACTAAACTGGGTTTTTCTTATTTAGTCGCTTTATCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTTACG CTGCTGGCTACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTCGCAGCGTAATAATGACGAAATCGCGANAGAGTTCGTCAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM626194             [                    ccgGCATCACTAA AAGCTCATATTAACCATGTTACAGGTAAAAAGTGCATTGAACGCTGTTACGGGGACAACTGGTTGACGCCACGGTTATGAAGGTCAATAGCAGAGACGCTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCGGACAGTTATCTGTAATGATGCTGATACGATAATCGCTTTAATCTTATTCCCACTAATACGCAGATTACTATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATGTTTGTGCGACTGTG TGCGTGATTGAGATTGAGTGCTTTCTCTTAGTT TTAAGAGATGATTTGGGGAGGGATTCAATGC GCAAT TTTGTAGCAGCTTCTCGCGCTT TCCGTAGTTACCGCGTAAAGCACG AGAAGCTGTG G AAGGTAAC CAACTAAACTGGG TTTTCTTATTT GTCGCTTT TCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTT CGCCTGCTGGCTACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTCGCAGCGTAATAATGACGAAATCGCGAAAGAGTTCGTCAAGCTAAAGTCGGAAGCCCGGCAGGAGATTGCGGCTCAGGGTTAAAAGGCAAAAGTTAAAC AAAATATGTCAGTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM625052             [                        ccgCACTAA AAGCTCATATTAACCATGTTACAGGTAAAAAGTGCATTGAACGCTGTTACGGGGACAACTGGTTAACGCCACGGTTATGAAGGTCAATAGCAGAGACGCTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCGGACAGTTGTCTGTAATGATGCTGATATCATAACTGCTTTAATCTTATTCCCACTAATACGCAGATTACAATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATGTCTGTGCGAATGTG TGCGTGATTGAGATTGAGTGCTTTCTCTTAGTT TTAAGAGATGATTTGGGGAGGGATTCAATGC GCAAT ATTGTAGCAGCTTCTCGCGCTT ACCGTAGCTACCGCGTAAAGCACG AGAAGCTGTG G AAGGTAACGCAACTAAACTGGG TTTTCTTATTT GTCGCTTT TCGCACAAACTCTGGACACACCCGTTCAACTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM615845             [                                                                                                                                    CTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCGGACAGTTATCTGTAATGATGCTGATACGATAATCGCTTTAATCTTATTCCCACTAATACGCAGATTACTATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGAGAAAGAATGTGTGTATGTTTGTGCGACTGTG TGCGTGATTGAAATTGAGTGCTTTCTCTTAGTT TTAAGAGATGATTTGGGGAGGGATTCAATGC GCAATCTTTGTAGCAGCTTCTCGCGCTT TCCGTAATTACCGCGTAAAGCACGAAGAAGCTGTG G AAGGTAACGCAACTAAACTGGG TTTTCTTATTT GTCGCTTT TCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTT CGCCTGCTGGCTACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTCGCAGCGTAATAATGACGAAATCGCGAAAGAGTTCGTCAAGCTAAAGTCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM598677             [                                                                                                                                                                                                                                                           ccgCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATGTTTGTGCGACTGTG TGCGTGATTGAGATTGAGTGCTTTCTCTTAGTT TTAAGAGATGATTTGGGGAGGGATTCAATGC GCAAT TTTGTAGCAGCTTCTCGCGCTT TCCGTAGTTACCGCGTAAAGCACG AGAAGCTGTG G AAGGTAACGCAACTAAACTGGG TTTTCTTATTT GTCGCTTT TCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTT CGCCTGCTGGCTACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTCGCAGCGTAATAATGACGAAATCGCGAAAGAGTTCGTCAAGCTAAAGTCGGAAGCCCGGCAGGAGATTGCGGCTCAGGGTTAAAAGGCAAAAGTTAAACAAAAATATGTCAGTGTTGCGTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAACAAAGAGAGAAAATTAAGAAAAAAA  AACAACAAACACATACACACACAGAAACACAAAACTATCCAACTTACATAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM634159             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGGCAAAAGTTAAACAAAAATATGTCAGTGTTGCGTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAACAAAGAGAGAAAATTAAGAAAAAAAACAACAACAAACACATACACACACAGAAACACAAAACTATCCAACATACATAAAAACAAACCTAGAGCTCCTAATAAGTAAAAACGAGAGCAGTGAATGAGGGCAGATGTAGTTATGAAAGAAAATAACAGTAAGGTAAACAGTAGCAGAGTAAGACCGTCATTGCGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGAGATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGACCGAGAGAGACAGAGAGTTGTTAAACCAGCAGCAGCAGCAACGCTATACATAACTAATCTTTAACTCTCGACTATATTTCTATTCCTACAATCGAACCATCACTGTGTGTATGTGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATA GGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGC                                                                                                                                                                                                                        ]
[+] EMBL BX614268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGTCATAGTTATACAAACTCGTCGTCTAATATTGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGATGTTATAAAGGGAGAGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAGCAGATTTCCGGGAGCTCTCCTTATCCAACCGAAAAACAAAACCAAAATACATATATCTAATGTTGTTTACTCCTCTTACTCTGCGTTACGATGTTATCAGTTACGTTTTGATG]


>consensus_8503#0 TCCCCCGACGGTTAACGAGGAAAGCATCACTAAAAGCTCATATTAACCATGTTACAGGTA AAAAGTGCATTGAACGCTGTTACGGGGACAACTGGTTGACGCCACGGTTATGAAGGTCAA TAGCAGAGACGCTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCG GACAGTTGTCTGTAATGATGCTGATACGATAATCGCTTTAATCTTATTCCCACTAATACG CAGATTACTATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATG TTTGTGCGACTGTGTGCGTGATTGAGATTGAGTGCTTTCTCTTAGTTTTAAGAGATGATT TGGGGAGGGATTCAATGCGCAATTTTGTAGCAGCTTCTCGCGCTTTCCGTAGTTACCGCG TAAAGCACGAGAAGCTGTGGAAGGTAACGCAACTAAACTGGGTTTTCTTATTTGTCGCTT TTCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTTCGCCTGCTGGCT ACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTC GCAGCGTAATAATGACGAAATCGCGAAAGAGTTCGTCAAGCTAAAGTCGGAAGCCCGGCA GGAGATTGCGGCTCAGGGTTAAAAGGCAAAAGTTAAACAAAAATATGTCAGTGTTGCGTG GACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAACAA AGAGAGAAAATTAAGAAAAAAAAACAACAAACACATACACACACAGAAACACAAAACTAT CCAACTTACATAAAAACAAACCTAGAGCTCCTAATAAGTAAAAACGAGAGCAGTGAATGA GGGCAGATGTAGTTATGAAAGAAAATAACAGTAAGGTAAACAGTAGCAGAGTAAGACCGT CATTGCGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGAGATAGGGAATGCAAAGCG ATAAAAGAAGAAGAGATAAGAGAGAAAGACCGAGAGAGACAGAGAGTTGTTAAACCAGCA GCAGCAGCAACGCTATACATAACTAATCTTTAACTCTCGACTATATTTCTATTCCTACAA TCGAACCATCACTGTGTGTATGTGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCG TCATAGTTATACAAACTCGTCGTCTAATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGT TGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGA ATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAAT GAAACAATCGATGTTATAAAGGGAGAGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAG CAGATTTCCGGGAGCTCTCCTTATCCAACCGAAAAACAAAACCAAAATACATATATCTAA TGTTGTTTACTCCTCTTACTCTGCGTTACGATGTTATCAGTTACGTTTTGATG



consensusID : consensus_8503#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1007
fasta sequence
                              [ATGCTCGAGCAGAATTGCCCGAGGGTAAGCATACTAAAAGCTCATATTACCTTGTTACAGGTAAAAAGTGCCTTGAACGCTGTTACGGGGGACAACTGGTTGACGCCACGGTTATGAACGGTCAACTAGCACANGACGCNTTTGGCACACCAGCGGACAGTAGTACCAGTCGTTCGAATACTCGCGACACTTCTNCGCGAACACGCCNGGTCTGGTAACTGATGCTGATACGGATAATCGCTCTTAAGTCTTACTTCCCACCTAACTACGCNCGCATTACTATCTTCAGCNACAAANTCGCAATAGCTTCTTCCTCTGCGTGTGAACAGAACTTGTGGTGTATGTTCTGTGCGACCCTTGCTTGCTGCCGCTTGGAACTATAGGAGAACTNTGGACAGCTGGCCTACTACACCTCCGTCTAANCGTANACTACTAAAANGACGCACATGGANCTCACAGGGGCGAGTGGGGGGACTTCCACACACTGGGCCGGCACACACATACGTACATGGTAAGAGCAAAGGACATCTTCCATTCGCGCGGGCGTCTTTTTCCCCGTNAACGGTATTAGACCCGGACGTTANAAAAGACCAACCGGAAGAAAAGCGCCGTTGGTGGTGGAGANCGCGGGGTAACAAGCCTGNGCCAAAGCGTTATGAGAANGCTTGGGGGGGCTATTATTAGTCTTTGTAAGTATCAATGGGATCAGCGNGGACCAGTAATTTATNCACNCCCCCACGCACAAAACAACCGATCCATGAGGGAAACNAAACGCAAACACAGCCCAGGGAGTATATCACGACAACACGTTATGNGCNACGACCCAACACAAGATTTCGCCGATATTGTGGNCGCTTGTGACCTTGGTGGCNCTAATNCCCGTGGCNTNTGGCAAGACAAAGACGGTNNGCATATTCTAGATTAAGTTTTGGTAAACCGACAATGAACACTGTGGGTCTGGTGGAAACGTAATGTTCCCGTATGGTGGGCAGAGATCGCCGTANGGN]

[+] EMBL AL933111             [ATGCTCGAGCAGAATTGCCCGAGGGTAAGCATACTAAAAGCTCATATTACCTTGTTACAGGTAAAAAGTGCCTTGAACGCTGTTACGGGGGACAACTGGTTGACGCCACGGTTATGAACGGTCAACTAGCACANGACGCNTTTGGCACACCAGCGGACAGTAGTACCAGTCGTTCGAATACTCGCGACACTTCTNCGCGAACACGCCNGGTCTGGTAACTGATGCTGATACGGATAATCGCTCTTAAGTCTTACTTCCCACCTAACTACGCNCGCATTACTATCTTCAGCNACAAANTCGCAATAGCTTCTTCCTCTGCGTGTGAACAGAACTTGTGGTGTATGTTCTGTGCGACCCTTGCTTGCTGCCGCTTGGAACTATAGGAGAACTNTGGACAGCTGGCCTACTACACCTCCGTCTAANCGTANACTACTAAAANGACGCACATGGANCTCACAGGGGCGAGTGGGGGGACTTCCACACACTGGGCCGGCACACACATACGTACATGGTAAGAGCAAAGGACATCTTCCATTCGCGCGGGCGTCTTTTTCCCCGTNAACGGTATTAGACCCGGACGTTANAAAAGACCAACCGGAAGAAAAGCGCCGTTGGTGGTGGAGANCGCGGGGTAACAAGCCTGNGCCAAAGCGTTATGAGAANGCTTGGGGGGGCTATTATTAGTCTTTGTAAGTATCAATGGGATCAGCGNGGACCAGTAATTTATNCACNCCCCCACGCACAAAACAACCGATCCATGAGGGAAACNAAACGCAAACACAGCCCAGGGAGTATATCACGACAACACGTTATGNGCNACGACCCAACACAAGATTTCGCCGATATTGTGGNCGCTTGTGACCTTGGTGGCNCTAATNCCCGTGGCNTNTGGCAAGACAAAGACGGTNNGCATATTCTAGATTAAGTTTTGGTAAACCGACAATGAACACTGTGGGTCTGGTGGAAACGTAATGTTCCCGTATGGTGGGCAGAGATCGCCGTANGGN]


>consensus_8503#1 ATGCTCGAGCAGAATTGCCCGAGGGTAAGCATACTAAAAGCTCATATTACCTTGTTACAG GTAAAAAGTGCCTTGAACGCTGTTACGGGGGACAACTGGTTGACGCCACGGTTATGAACG GTCAACTAGCACANGACGCNTTTGGCACACCAGCGGACAGTAGTACCAGTCGTTCGAATA CTCGCGACACTTCTNCGCGAACACGCCNGGTCTGGTAACTGATGCTGATACGGATAATCG CTCTTAAGTCTTACTTCCCACCTAACTACGCNCGCATTACTATCTTCAGCNACAAANTCG CAATAGCTTCTTCCTCTGCGTGTGAACAGAACTTGTGGTGTATGTTCTGTGCGACCCTTG CTTGCTGCCGCTTGGAACTATAGGAGAACTNTGGACAGCTGGCCTACTACACCTCCGTCT AANCGTANACTACTAAAANGACGCACATGGANCTCACAGGGGCGAGTGGGGGGACTTCCA CACACTGGGCCGGCACACACATACGTACATGGTAAGAGCAAAGGACATCTTCCATTCGCG CGGGCGTCTTTTTCCCCGTNAACGGTATTAGACCCGGACGTTANAAAAGACCAACCGGAA GAAAAGCGCCGTTGGTGGTGGAGANCGCGGGGTAACAAGCCTGNGCCAAAGCGTTATGAG AANGCTTGGGGGGGCTATTATTAGTCTTTGTAAGTATCAATGGGATCAGCGNGGACCAGT AATTTATNCACNCCCCCACGCACAAAACAACCGATCCATGAGGGAAACNAAACGCAAACA CAGCCCAGGGAGTATATCACGACAACACGTTATGNGCNACGACCCAACACAAGATTTCGC CGATATTGTGGNCGCTTGTGACCTTGGTGGCNCTAATNCCCGTGGCNTNTGGCAAGACAA AGACGGTNNGCATATTCTAGATTAAGTTTTGGTAAACCGACAATGAACACTGTGGGTCTG GTGGAAACGTAATGTTCCCGTATGGTGGGCAGAGATCGCCGTANGGN



consensusID : consensus_8503#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 699
fasta sequence
                              [CCGCCCACGCGTCCGCGTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAACAAAGAGAGAAAATTAAGAAAAAAAACAACAACAAACACATACACACACAGAAACACAAAACTATCCAACTTACATTAAAACAAACCTAGAGCTCCTAAGAAGTAAAAACGAGAGCAGTGAATGAGGGCAGATGTAGTTATGAAAGAAAATAACAGTAAGATAAACAGTAGCAGAGTAAGACCGTCATTACGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGAGATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGAGAAAGAGCGAGAGAGACAGAGAGTTGTTAAACCAGCAGCAGCAGCAGCAACGCTATACATAACTAATCTTTAACTCTCGACTATATTTCTATTCCTACAATCGAACCATCACTGTGTGTATGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGA]

[+] EMBL BM587482             [CCGCCCACGCGTCCGCGTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAACAAAGAGAGAAAATTAAGAAAAAAAACAACAACAAACACATACACACACAGAAACACAAAACTATCCAACTTACATTAAAACAAACCTAGAGCTCCTAAGAAGTAAAAACGAGAGCAGTGAATGAGGGCAGATGTAGTTATGAAAGAAAATAACAGTAAGATAAACAGTAGCAGAGTAAGACCGTCATTACGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGAGATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGAGAAAGAGCGAGAGAGACAGAGAGTTGTTAAACCAGCAGCAGCAGCAGCAACGCTATACATAACTAATCTTTAACTCTCGACTATATTTCTATTCCTACAATCGAACCATCACTGTGTGTATGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGA]


>consensus_8503#2 CCGCCCACGCGTCCGCGTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGT GAATATAAGATAAAAACAAAGAGAGAAAATTAAGAAAAAAAACAACAACAAACACATACA CACACAGAAACACAAAACTATCCAACTTACATTAAAACAAACCTAGAGCTCCTAAGAAGT AAAAACGAGAGCAGTGAATGAGGGCAGATGTAGTTATGAAAGAAAATAACAGTAAGATAA ACAGTAGCAGAGTAAGACCGTCATTACGAACGCTTAGAATAGATACCGAAGGAAGACTGT AGAGATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGAGAAAGAGCGA GAGAGACAGAGAGTTGTTAAACCAGCAGCAGCAGCAGCAACGCTATACATAACTAATCTT TAACTCTCGACTATATTTCTATTCCTACAATCGAACCATCACTGTGTGTATGTGTGTGTG TATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATAGGA GCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTC CGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTT ACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGA



consensusID : consensus_8503#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 593
fasta sequence
                              [TCGAGGCAGAATCGCAGAGGTTTAGTGTGTATGTGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGATGTTATAAAGGGAGAGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAGCAGATTTCCGGGAGCTCTCCATATCCAACCGAAAAACAAAACCAAAATACATATATCTAATGTGTTATACTCCTCTTACTCTGCGTTCACGATGTTATCAGTTACGTTTTCGATGAANCATGAAACCAAAAAAAAACAAACACAAAACATACACCNAAGACAACGCTAAAAANACACTTACGCCANAGGATCGACATTCTCGTTACCCGTATCAGATTCAAGTGTACGCAAACCAGGCTTAGAGGGTCAACCAGGATCTGGTCAACCGGTAGATCGCGGTAA]

[+] EMBL AL696733             [TCGAGGCAGAATCGCAGAGGTTTAGTGTGTATGTGTGTGTGTGTATCTCCAAATCGCAAATTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGATGTTATAAAGGGAGAGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAGCAGATTTCCGGGAGCTCTCCATATCCAACCGAAAAACAAAACCAAAATACATATATCTAATGTGTTATACTCCTCTTACTCTGCGTTCACGATGTTATCAGTTACGTTTTCGATGAANCATGAAACCAAAAAAAAACAAACACAAAACATACACCNAAGACAACGCTAAAAANACACTTACGCCANAGGATCGACATTCTCGTTACCCGTATCAGATTCAAGTGTACGCAAACCAGGCTTAGAGGGTCAACCAGGATCTGGTCAACCGGTAGATCGCGGTAA]


>consensus_8503#3 TCGAGGCAGAATCGCAGAGGTTTAGTGTGTATGTGTGTGTGTGTATCTCCAAATCGCAAA TTGTATTGTCGTCATAGTTATACAAACTCGTCGTCTAATAGGAGCGTCGTCTAAAAGGAT TTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGACACATTCCGTCCGTTCCGTATTTG GTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTCCCACTTTACTACTATCATCAAACT CGAGCAGCAATGAAACAATCGATGTTATAAAGGGAGAGAAAGAGCAAGATAGTGAAGCTA AAAGCGATCAGCAGATTTCCGGGAGCTCTCCATATCCAACCGAAAAACAAAACCAAAATA CATATATCTAATGTGTTATACTCCTCTTACTCTGCGTTCACGATGTTATCAGTTACGTTT TCGATGAANCATGAAACCAAAAAAAAACAAACACAAAACATACACCNAAGACAACGCTAA AAANACACTTACGCCANAGGATCGACATTCTCGTTACCCGTATCAGATTCAAGTGTACGC AAACCAGGCTTAGAGGGTCAACCAGGATCTGGTCAACCGGTAGATCGCGGTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8503#0      TCCCCCGACGGTTAACGAGGAAAGCATCACTAAAAGCTCATATTAACCATGTTACAGGTA 60
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      AAAAGTGCATTGAACGCTGTTACGGGGACAACTGGTTGACGCCACGGTTATGAAGGTCAA 120
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TAGCAGAGACGCTTTTGCAACAGGGAAGTAGTACCAGTTGTTGAATATCGGACATTTTCG 180
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      GACAGTTGTCTGTAATGATGCTGATACGATAATCGCTTTAATCTTATTCCCACTAATACG 240
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      CAGATTACTATTTCAGCAAAATCGAATAGTTCTTCTTGCGTGTGAAAGAATGTGTGTATG 300
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TTTGTGCGACTGTGTGCGTGATTGAGATTGAGTGCTTTCTCTTAGTTTTAAGAGATGATT 360
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TGGGGAGGGATTCAATGCGCAATTTTGTAGCAGCTTCTCGCGCTTTCCGTAGTTACCGCG 420
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TAAAGCACGAGAAGCTGTGGAAGGTAACGCAACTAAACTGGGTTTTCTTATTTGTCGCTT 480
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      -----------------------------ATGCTCGAGCAGAATTGCCCGAGGGTAAGCA 31
                                                                                  

consensus_8503#0      TTCCCACAAACTCTGGACACACCCGTTCAACTTGCAGCAAAGTTCCTTCGCCTGCTGGCT 540
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      TACTAAAAGCTCATATTACCTTGTTACAGGTAAAAAGTGCCTTGAACGCTGTTACGGGGG 91
                                                                                  

consensus_8503#0      ACCGCTGCAGAAGCGCATCCATATGGACGAGACTGGCTGGACTATCCTGCGCATCCTGTC 600
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ACAACTGGTTGACGCCACGGTTATGAACGGTCAACTAGCACANGACGCNTTTGGCACACC 151
                                                                                  

consensus_8503#0      GCAGCGTAATAATGACGAAATCGCGAAAGAGTTCGTCAAGCTAAAGTCGGAAGCCCGGCA 660
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      AGCGGACAGTAGTACCAGTCGTTCGAATACTCGCGACACTTCTNCGCGAACACGCCNGGT 211
                                                                                  

consensus_8503#0      GGAGATTGCGGCTCAGGGTTAAAAGGCAAAAGTTAA---ACAAAAATATGTCAGTGTTGC 717
consensus_8503#2      ---------------------------------------CCGCCCACGCGTC-----CGC 16
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      CTGGTAACTGATGCTGATACGGATAATCGCTCTTAAGTCTTACTTCCCACCTAACTACGC 271
                                                                                  

consensus_8503#0      GTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAA 777
consensus_8503#2      GTGGACCGAAAACATAACATAATAATTCGTTATTAACTATTCGTGAATATAAGATAAAAA 76
consensus_8503#3      -----TCGAGGCAGAATCGCAGAGGTTTAGTGTGTA-TGTGTGTGTGTGTATCTCCAAAT 54
consensus_8503#1      NCGCATTACTATCTTCAGCNACAAANTCGCAATAGCTTCTTCCTCTGCGTGTGAACAGAA 331
                                          *     *     *    * *   *     *      * * 

consensus_8503#0      CAAAGAGAGAAAATTAAGAAAAAAAA--ACA-ACAAACACATACACACACAGAAACACAA 834
consensus_8503#2      CAAAGAGAGAAAATTAAGAAAAAAAACAACA-ACAAACACATACACACACAGAAACACAA 135
consensus_8503#3      CGCAAATTGTATTGTCGTCATAGTTAT-----ACAAACTCGTCGTCTAATAGGAGCGT-- 107
consensus_8503#1      CTTGTGGTGTATGTTCTGTGCGACCCTTGCTTGCTGCCGCTTGGAACTATAGGAGAACTN 391
                      *       * *   *                  *   * * *      * ** *      

consensus_8503#0      AA------CTATCCAACTTACATAAAAACAAACCTAGAGCTCCTAATAAGTAAAAACGAG 888
consensus_8503#2      AA------CTATCCAACTTACATTAAAACAAACCTAGAGCTCCTAAGAAGTAAAAACGAG 189
consensus_8503#3      ---------CGTCTAAAAGGATTTG--GCAGGCGTTGTTGGCATCCGGAGCGACGGCGGA 156
consensus_8503#1      TGGACAGCTGGCCTACTACACCTCCGTCTAANCGTANACTACTAAAANGACGCACATGGA 451
                                  * *       *      *  * *      *               *  

consensus_8503#0      AGCAGTGAATGAGGGCAG----ATGTAGTTATGAAAGAAAATAAC--AGTAAGGTAAACA 942
consensus_8503#2      AGCAGTGAATGAGGGCAG----ATGTAGTTATGAAAGAAAATAAC--AGTAAGATAAACA 243
consensus_8503#3      CACATTCCGTCCGTTCCGT---ATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAAC 213
consensus_8503#1      NCTCACAGGGGCGAGTGGGGGGACTTCCACACACTGGGCCGGCACACACATACGTACATG 511
                                  *    *    *  *          *       *  *         *  

consensus_8503#0      GTAGCAGAGTAAGACCGTCATTGCGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGA 1002
consensus_8503#2      GTAGCAGAGTAAGACCGTCATTACGAACGCTTAGAATAGATACCGAAGGAAGACTGTAGA 303
consensus_8503#3      TTCCCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGATGTTATAAAGG 273
consensus_8503#1      GTAAGAGCAAAGGACATCTTCCATTCGCGCGGGCGTCTTTTTCCCCGTNAACGGTATTAG 571
                       *   *    *  **            **             *           *     

consensus_8503#0      GATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGAC------CGAGAG 1056
consensus_8503#2      GATAGGGAATGCAAAGCGATAAAAGAAGAAGAGATAAGAGAGAAAGAGAAAGAGCGAGAG 363
consensus_8503#3      GAGAGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAGCAGATTTC--------CGGGAG 325
consensus_8503#1      ACCCGGACGTTANAAAAGACCAACCGGAAGAAAAGCGCCGTTGGTGGTGGAGANCGCGGG 631
                          *        *       **     *    *                    ** * *

consensus_8503#0      AGACAGAGAGTTGTTAAACCAGCAGCAGCAGCA---ACGCTATACATAACTAATCTTT-- 1111
consensus_8503#2      AGACAGAGAGTTGTTAAACCAGCAGCAGCAGCAGCAACGCTATACATAACTAATCTTT-- 421
consensus_8503#3      CTCTCCATATCCAACCGAAAAACAAAACCAAAA-------TACATATATCTAATGTGT-- 376
consensus_8503#1      GTAACAAGCCTGNGCCAAAGCGTTATGAGAANGCTTGGGGGGGCTATTATTAGTCTTTGT 691
                            *          *           *               **   ** * * *  

consensus_8503#0      AACTCTCGACTATATTTCTATT--CCTACAATCGAACCATCACTGTGTGTATGTGTGTGT 1169
consensus_8503#2      AACTCTCGACTATATTTCTATT--CCTACAATCGAACCATCACTGTGTGTATGTGTGTGT 479
consensus_8503#3      TATACTC--CTCTTACTCTGCG--TTCACGAT---GTTATCAGT-----TACGTTTTCG- 423
consensus_8503#1      AAGTATCAATGGGATCAGCGNGGACCAGTAATTTATNCACNCCCCCACGCACAAAACAAC 751
                       *   **                       **      *           *         

consensus_8503#0      --GTGTATCTCCAAATCGCAAATTGTATT-GTCGTCATAGTTATAC-AAACTCGTCGTCT 1225
consensus_8503#2      --GT--ATCTCCAAATCGCAAATTGTATT-GTCGTCATAGTTATAC-AAACTCGTCGTCT 533
consensus_8503#3      --ATGAANCATGAAACCA-AAAAAAAACA-AACACAAAACATACACCNAAGACAACG-CT 478
consensus_8503#1      CGATCCATGAGGGAAACNAAACGCAAACACAGCCCAGGGAGTATATCACGACAACACGTT 811
                         *  *      ** *  **     *     *        ** *              *

consensus_8503#0      AATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGA 1285
consensus_8503#2      AATAGGAGCGTCGTCTAAAAGGATTTGGCAGGCGTTGTTGGCATCCGGAGCGACGGCGGA 593
consensus_8503#3      AAAAANACACTTACGCCANAGGATC-----GACATTCTCGTTACCCGTATCAGATTCAAG 533
consensus_8503#1      ATGNGCNACGACCCAACACAAGATTTCGCCGATATTGTGGNCGCTTGTGACCTTGGTGGC 871
                      *                * * ***      *   ** * *      *   *         

consensus_8503#0      CACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTC 1345
consensus_8503#2      CACATTCCGTCCGTTCCGTATTTGGTTTTGAATGAATCCTGCCCAGTTTTGCCCAACTTC 653
consensus_8503#3      TGTACGCAAACCA----------GGCTTAGAGGG---TCAACCAGGATCTGGTCAAC--- 577
consensus_8503#1      NCTAATNCCCGTGGCNTNTGGCAAGACAAAGACGG--TNNGCATATTCTAGATTAAGTTT 929
                         *                    *        *       *        *   **    

consensus_8503#0      CCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGATGTTATAAAGGGAG 1405
consensus_8503#2      CCACTTTACTACTATCATCAAACTCGAGCAGCAATGAAACAATCGA-------------- 699
consensus_8503#3      -CGGTAGATCGCGGTAA------------------------------------------- 593
consensus_8503#1      TGGTAAACCGACAATGAACACTGTGGGTCTGGTGGAAACGTAATGTTCCCGTATGGTGGG 989
                                 *  * *                                           

consensus_8503#0      AGAAAGAGCAAGATAGTGAAGCTAAAAGCGATCAGCAGATTTCCGGGAGCTCTCCTTATC 1465
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      CAGAGATCGCCGTANGGN------------------------------------------ 1007
                                                                                  

consensus_8503#0      CAACCGAAAAACAAAACCAAAATACATATATCTAATGTTGTTTACTCCTCTTACTCTGCG 1525
consensus_8503#2      ------------------------------------------------------------
consensus_8503#3      ------------------------------------------------------------
consensus_8503#1      ------------------------------------------------------------
                                                                                  

consensus_8503#0      TTACGATGTTATCAGTTACGTTTTGATG 1553
consensus_8503#2      ----------------------------
consensus_8503#3      ----------------------------
consensus_8503#1      ----------------------------
                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)