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Anopheles gambiae
cluster # 8506 cluster # 8506       Sequences # 10       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8506#0 length = 1944 sequences # 10  

consensusID : consensus_8506#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1944
fasta sequence
                              [ATCTCGCAAGCCGATTGTTGCTTACAGAATTTTGTACGTTAAAAAAGGAACATATAAAGCACGCTGATGACACTGTTTCTGAGACTTCGGGAGAAACACTCCATTTCCATCACAACCAGACTCACACATACACATTAGACCATTCCTATCGCAATCGTTCCACATATCTTCCGGGTAATAATAAACGGTATGCTCGTTATCTTATCGCCCGTACCATAGCAAGGGCTCGCCGCCTAGCGTGGAACCAGGTTCATCCAGAAGCCATGCTTCGCGTTCAACCCCGCCGACGTTTCATCCAGCACGAGCGGAATGGTCAATTTGCTGCCGGGTTGGAATATGAAATTCGACAGCATGTAAAACAGGAAGCACTTGGCCTGCATCAGCGCCAACCGGGAGCCGATACAGTTCCGCAGCCCGGTTCCAAACGGCACGTACGCGTCCTGATTGATGTTGTTCGGGTCGGCAAACCGCTCCGGATCAAACCGTAACGGATCGGGGAAAAACTTCTCATCCAGATGGAACGATTTCAGCGGGATCGACACATTGAGCCCCTTCTCGATCGTGACGCGCGTCCCGTCCGTGTTGGTGAACGTGTAGTCCTTGGTGCAGCGGCGATTGGTCAGACCGAATGGCGCCCACCGCCGCAGCGTCTCCGACACGACCATGTCGAGGTATTTCATCTTCTGCAAGATCTCGTACGTCGGCGTCGCACCATCAATCAACTCGTCGCGCGCACTATCAATCTCCGCCCGCAGTCGCTCCTGAATGGGCTGATTGACAGCCAGCTCGTAGCTGGTGAAGCACAGCACCGTGGTCGTCGTCTCGATGCCACCGAAGAAGAACGATACGGCCGCCGCCGTAATGTCCACATCGTGCCACTGGAGCGTCTCGCCCGTGGCACCGCGCTGCTCCACCGTGTGCGTTTCGGCGGTCGAAAACCCGGCACTCTCGAGCGCATCGTCCTCCGTCTGCTCCGAGTTGAGCTCGTTCCGGCGGGCCTGCAGCAGCAGATGGATAAAGTCGGGCCGCTTGATGAGGTTCCTCTCGCGGTAGCGAATGTTGGTCGAGACGGCTTCCAGGTAGAACTCGTTCACATCCTTGTACAGCACACCGAGCCGGAGGAACTTGAACAACCCCGGCAGGATCGTTGTCATTAGCAGCTTCAGCCCCGGCAGCCCGTCGATCTGCGCCAACCGTTTGCCCTTGAGGAAGAACTCGTTGTCGGGATCGGTCAGCGAGTCCACGTCCACGCCGAACGAGATGGATGTCATCGCATCGTTGCCCAGCTTGGAGTACAGATCGCGCAGCTCCATCGCGAACGGTTTGCCGCGGGCAAACACCA-CCAGCCGCTTCATCGCATCGCCCGCACTCTTGGACAGCAGCACGAACATGTTGCGTATTTTGCTGCCGGTAAAGGCAGGGCTCAGACCGGACCGATGATGCCGCCAGCGGGCTCCGTTGGTGAAGAAGAGCGAGCGGGCCAGCAGTGGATCGTGCTCGAGCGACAGCTGCGTCACGTGGTCGGTAAAGTGGTCGAAATCTTTAATCGCCATCTCCTTGAACAGGGCGGGATCGTGCACCAGGTAGGCCGGTGTTCGCAGTGTAAACACGCCCGAGATGCGCGTGTTCGGGAACATGTGGTAGCCTTCCGAGGCCACATCGACGGCATGCTTTTCCTGGGTGAAGAACGACCACACTTGGCCGAAAAATGGGACCGGTTTCACGTACGGGATGTTACGCTTCTCGAAGTAATCGTACGTCGCGATGCTCCACCGATAGAGCAGATACAGGGCGAGCGGCAACGCCCATAACAGAAACATTCTGGACCCAGAGACCTATAGG-TTTGAGCGGGCCTAGGGGCCGCCCCACACTACACGCACAAAAACCGGTGAGAACG-AGAGCGCGCGCGCGCTCGTGCTCGGGCGTCCGCCCACGCGTCCGCGG]

[+] EMBL CNS08CPU             [ATCTCGCAAGCCGATTGTTGCTTACAGAATTTTGTACGTTAAAAAAGGAACATATAAAGCACGCTGATGACACTGTTTCTGAGACTTCGGGAGAAACACTCCATTTCCATCACAACCAGACTCACACATACACATTAGACCATTCCTATCGCAATCGTTCCACATATCTTCCGGGTAATAATAAACGGTATGCTCGTTATCTTATCGCCCGTACCATAGCAAGGGCTCGCCGCCTAGCGTGGAACCAGGTTCATCCAGAAGCCATGCTTCGCGTTCAACCCCGCCGACGTTTCATCCAGCACGAGCGGAATGGTCAATTTGCTGCCGGGTTGGAATATGAAATTCGACAGCATGTAAAACAGGAAGCACTTGGCCTGCATCAGCGCCAACCGGGAGCCGATACAGTTCCGCAGCCCGGTTCCAAACGGCACGTACGCGTCCTGATTGATGTTGTTCGGGTCGGCAAACCGCTCCGGATCAAACCGTAACGGATCTGGGAAAAACTTCTCATCCAGATGGAACGATTTCAGCGGGATCGACACATTGAGCCCCTTCTCGATCGTGACGCGCGTCCCGTCCGTGTTGGTGAACGTGTAGTCCTTGGTGCAGCGGCGATTGGTCAGACCGAATGGCGCCCACCGCCGCAGCGTCTCCGACACGACCATGTCGAGGTATTTCATCTTCTGCAAGATCTCGTACGTCGGCGTCGCACCATCAATCAACTCGTCGCGCGCACTATCAATCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BX620667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GTCGGCAACCCGCTCCGGATCAANCCGTAACGGATCGGGNAAGAACTTCTCATCCAGATGAAACGATTTCAGCGGGATCGACACATTGAGCCCCTTCTCGATCGTGACGCGCGTCCCGTCCGTGTTGGTGAACGTGTAGTCCTTGGTGCAGCGGCGATTGGTCAGACCGAATGGCGCCCACCGCCGCAGCGTCTCCGATACGACCATGTCGAGGTATTTCATCTTCTGCAAGATCTCGTACGTCGGCGTCGCACCATCAATCAACTCGTCGCGCGCACTATCAATCTCCGCCCGCAGTCGCTCCTGAATGGGCTGATTGACAGCCAGCTCGTAGCTGGTGAAGCACAGCACCGTGGTCGTCGTCTCGATGCCACCGAAGAAGAACGATACGGCCGCCGCCGTAATGTCCACATCGTGCCACTGGAGCGTCTCGCCCGTGGCACCGCGCTGCTCCACCGTGTGCGTTTCGGCGGTCGAAAACCCGGCACTCTCGAGCGCATCGTCCTCCGTCTGCTCCGAGTTGAGCTCGTTCCGGCGGGCCTGCAGCAGCAGATGGATAAAGTCGGGCCGCTTGATGAGGTTCCTCTCGCGGTAGCGAATGTTGGTCGAGACGGCTTCCAGGTAGAACTCGTTCACATCCTTGTACAGCACACCGAGCCGGAGGAACTTGAACAGCCCCGGCAGGATCGTTGTCATTAGCAGCTTCAGCCCCGGCAGCCCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BX618067             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCAAACCGTAACGGATCGGGGACCCCCTTCTCATCCAGATGGAACGATTTCAGCGGGATCGACACATTGAGCCCCTTCTCGATCGTGACGCGCGTCCCGTCCGTGTTGGTGAACGTGTAGTCCTTGGTGCAGCGGCGATTGGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AGA283956            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTCCACATCGTGCCACTGGAGCGTCTCGCCCGTGGCACCGCGCTGCTCCACCGTGTGCGTTTCGGCGGTCGAAAACCCGGCACTCTCGAGCGCATCGTCCTCCGTCTGCTCCGAGTTGAGCTCGTTCCGGCGGGCCTGCAGCAGCAGATGGATAAAGTCGGGCCGCTTGATGAGGTTCCTCTCGCGGTAGCGAATGTTGGTCGAGACGGCTTCCAGGTAGAACTCGTTCACATCCTTGTACAGCACACCGAGCCGGAGGAACTTGAACAACCCCGGCAGGATCGTTGTCATTAGCAGCTTCAGCCCCGGCAGCCCGTCGATCTGCGCCAACCGTTTGCCCTTGAGGAAGAACTCGTTGTCGGGATCGGTCAGCGAGTCCACGTCCACGCCGAACGAGATGGATGTCATCGCATCGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AGA284190            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTCCACATCGTGCCACTGGAGCGTCTCGCCCGTGGCACCGCGCTGCTCCACCGTGTGCGTTTCGGCGGTCGAAAACCCGGCACTCTCGAGCGCATCGTCCTCCGTCTGCTCCGAGTTGAGCTCGTTCCGGCGGGCCTGCAGCAGCAGATGGATAAAGTCGGGCCGCTTGATGAGGTTCCTCTCGCGGTAGCGAATGTTGGTCGAGACGGCTTCCAGGTAGAACTCGTTCACATCCTTGTACAGCACACCGAGCCGGAGGAACTTGAACAACCCCGGCAGGATCGTTGTCATTAGCAGCTTCAGCCCCGGCAGCCCGTCGATCTGCGCCAACCGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AGA285252            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCCTCTCGCGGTAGCGAATGTTGGTCGAGACGGCTTCCAGGTAGAACTCGTTCACATCCTTGTACAGCACACCGAGCCGGGGGAACTTGAACAACCCCGGCAGGATCGTTGTCATTAGCAGCTTCAGCCCCGGCAGCCCGTCGATCTGCGCCAACCGTTTGCCCTTGAGGAAGAACTCGTTGTCGGGATCGGTCAGCGAGTCCACGTCCACGCCGAACGAGATGGATGTCATCGCATCGTTGCCCAGCTTGGAGTACAGATCGCGCAGCTCCATTGCGAACGGTTTGCCGCGGGCAAACACCA CCAGCCGCTTCATCGCATCGCCCGCACTCTTGGACAGCAGCACGAACATGTTGCGTATTTTGCTGCCGGTAAAGGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08CPT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCACGTCCACGCCGAACGAGATGGAAGTCATCGCATCGTTGCCCAGCTTGGAGTACAGATCGCGCAGCTCCATCGCGAACGGTTTGCCGCGGGCAAACACCA CCAGCCGCTTCATCGCATCGCCCGCACTCTTGGACAGCAGCACGAACATGTTGCGTATTTTGCTGCCGGTAAAGGCAGGGCTCAGACCGGACCGATGATGCCGCCAGCGGGCTCCGTTGGTGAAGAAGAGCGAGCGGGCCAGCAGTGGATCGTGCTCGAGCGACAGCTGCGTCACGTGGTCGGTAAAGTGGTCGAAATCTTTAATCGCCATCTCCTTGAACAGGGCGGGATCGTGCACCAGGTAGGCCGGTGTTGTCAGTGTAAACACGCCCGAGATGCGCGTGTTCGGGAACATGTGGTAGCCTTCCGAGGCCACATCGACGGCATGCTTTTCCTGGGTGAAGAACGACCACACTTGGCCGAAAAATGGGACCGGTTTCACGTACGGGATGTTACGCTTCTCGAAGTAATCGTACG CGCGATGCTCCACCGATAGAGCAGATACAGGGCGAGCGGCAACGCCCATAACAGAAACATTCTGGACCCAGAGACCTATAGG TTTGAGCGGGCCTAGGGGCCGCCCCACACTACACGCACAAAAACCGGTGAGAACGCAGAGGGCG                                       ]
[-] EMBL BM635478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                aaGTCATCGCATCGTTGCCCAGCTTGGAGTACAGATCGCGCAGCTCCATCGCGAACGGTTTGCCGCGGGCAAACACCA CCAGCCGCTTCATCGCATCGCCCGCACTCTTGGACAGCAGCACGAACATGTTGCGTATTTTGCTGCCGGTAAAGGCAGGGCTCAGACCGGACCGATGATGCCGCCAGCGGGCTCCGTTGGTGAAGAAGAGCGAGCGGGCCAGCAGTGGATCGTGCTCGAGCGACAGCTGCGTCACGTGGTCGGTAAAGTGGTCGAAATCTTTAATCGCCATCTCCTTGAACAGGGCGGGATCGTGCACCAGGTAGGCCGGTGTTCGCAGTGTAAACACGCCCGAGATGCGCGTGTTCGGGAACATGTGGTAGCCTTCCGAGGCCACATCGACGGCATGCTTTTCCTGGGTGAAGAACGACCACACTTGGCCGAAAAATGGGACCGGTTTCACGTACGGGATGTTACGCTTCTCGAAGTAATCGTACGTCGCGATGCTCCACCGATAGAGCAGATACAGGGCGAGCGGCAACGCCCATAACAGAAACATTCTGGACCCAGAGACCTATAGGTTTTGAGCGGGCCTAGGGGCCGCCCCACACTACACGCACAAAAACCGGTGAGAACG AGAGCGCGCGCGCGCTCGTGCTCGG                      ]
[-] EMBL BM655592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TACAGATCGCGCAGCTCCATCGCGAACGGTTTGCCGCGGGCAAACACCACCCAGCCGCTTCATCGCATCGCCCGCACTCTTGGACAGCAGCACGAACATGTTGCGTATTTTGCTGCCGGTAAAGGCAGGGCTCAGACCGGACCGATGATGCCGCCAGCGGGCTCCGTTGGTGAAGAAGAGCGAGCGGGCCAGCAGTGGATCGTGCTCGAGCGACAGCTGCGTCACGTGGTCGGTAAAGTGGTCGAAATCTTTAATCGCCATCTCCTTGAACAGGGCGGGATCGTGCACCAGGTAGGCCGGTGTTCGCAGTGTAAACACGCCCGAGATGCGCGTGTTCGGGAACATGTGGTAGCCTTCCGAGGCCACATCGACGGCATGCTTTTCCTGGGTGAAGAACGACCACACTTGGCCGAAAAATGGGACCGGTTTCACGTACGGGATGTTACGCTTCTCGAAGTAATCGTACGTCGCGATGCTCCACCGATAGAGCAGATACAGGGCGAGCGGCAACGCCCATAACAGAAACATTCTGGACCCAGAGACCTATAGG TTTGAGCGGGCCTAGGGGCCGCCCCACACTACACGCACAAAAACCGGTGAGAACG AGAGCGCGCGCGCGCTCGTGCCCACGCGTCCGCCCACGCGTCCGCGG]
[-] EMBL AGA285486            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACGGCATGCTTTTCCTGGGTGAAGAACGACCACACTTGGCCGAAAAATGGGACCGGTTTCACGTACGGGATGTTACGCTTCTCGAAGTAATCGTACGTCGCGATGCTCCACCGGTAGAGCAGATACAGGGCGAGCGGCAACGCCCATAACAGAAACATTCTGGACCCAGAGACC  TAGG TTTGAGCGGGCCTAGGGGCCGCCCCACACTACACGCACAAAAACCGGT                                                       ]


>consensus_8506#0 ATCTCGCAAGCCGATTGTTGCTTACAGAATTTTGTACGTTAAAAAAGGAACATATAAAGC ACGCTGATGACACTGTTTCTGAGACTTCGGGAGAAACACTCCATTTCCATCACAACCAGA CTCACACATACACATTAGACCATTCCTATCGCAATCGTTCCACATATCTTCCGGGTAATA ATAAACGGTATGCTCGTTATCTTATCGCCCGTACCATAGCAAGGGCTCGCCGCCTAGCGT GGAACCAGGTTCATCCAGAAGCCATGCTTCGCGTTCAACCCCGCCGACGTTTCATCCAGC ACGAGCGGAATGGTCAATTTGCTGCCGGGTTGGAATATGAAATTCGACAGCATGTAAAAC AGGAAGCACTTGGCCTGCATCAGCGCCAACCGGGAGCCGATACAGTTCCGCAGCCCGGTT CCAAACGGCACGTACGCGTCCTGATTGATGTTGTTCGGGTCGGCAAACCGCTCCGGATCA AACCGTAACGGATCGGGGAAAAACTTCTCATCCAGATGGAACGATTTCAGCGGGATCGAC ACATTGAGCCCCTTCTCGATCGTGACGCGCGTCCCGTCCGTGTTGGTGAACGTGTAGTCC TTGGTGCAGCGGCGATTGGTCAGACCGAATGGCGCCCACCGCCGCAGCGTCTCCGACACG ACCATGTCGAGGTATTTCATCTTCTGCAAGATCTCGTACGTCGGCGTCGCACCATCAATC AACTCGTCGCGCGCACTATCAATCTCCGCCCGCAGTCGCTCCTGAATGGGCTGATTGACA GCCAGCTCGTAGCTGGTGAAGCACAGCACCGTGGTCGTCGTCTCGATGCCACCGAAGAAG AACGATACGGCCGCCGCCGTAATGTCCACATCGTGCCACTGGAGCGTCTCGCCCGTGGCA CCGCGCTGCTCCACCGTGTGCGTTTCGGCGGTCGAAAACCCGGCACTCTCGAGCGCATCG TCCTCCGTCTGCTCCGAGTTGAGCTCGTTCCGGCGGGCCTGCAGCAGCAGATGGATAAAG TCGGGCCGCTTGATGAGGTTCCTCTCGCGGTAGCGAATGTTGGTCGAGACGGCTTCCAGG TAGAACTCGTTCACATCCTTGTACAGCACACCGAGCCGGAGGAACTTGAACAACCCCGGC AGGATCGTTGTCATTAGCAGCTTCAGCCCCGGCAGCCCGTCGATCTGCGCCAACCGTTTG CCCTTGAGGAAGAACTCGTTGTCGGGATCGGTCAGCGAGTCCACGTCCACGCCGAACGAG ATGGATGTCATCGCATCGTTGCCCAGCTTGGAGTACAGATCGCGCAGCTCCATCGCGAAC GGTTTGCCGCGGGCAAACACCACCAGCCGCTTCATCGCATCGCCCGCACTCTTGGACAGC AGCACGAACATGTTGCGTATTTTGCTGCCGGTAAAGGCAGGGCTCAGACCGGACCGATGA TGCCGCCAGCGGGCTCCGTTGGTGAAGAAGAGCGAGCGGGCCAGCAGTGGATCGTGCTCG AGCGACAGCTGCGTCACGTGGTCGGTAAAGTGGTCGAAATCTTTAATCGCCATCTCCTTG AACAGGGCGGGATCGTGCACCAGGTAGGCCGGTGTTCGCAGTGTAAACACGCCCGAGATG CGCGTGTTCGGGAACATGTGGTAGCCTTCCGAGGCCACATCGACGGCATGCTTTTCCTGG GTGAAGAACGACCACACTTGGCCGAAAAATGGGACCGGTTTCACGTACGGGATGTTACGC TTCTCGAAGTAATCGTACGTCGCGATGCTCCACCGATAGAGCAGATACAGGGCGAGCGGC AACGCCCATAACAGAAACATTCTGGACCCAGAGACCTATAGGTTTGAGCGGGCCTAGGGG CCGCCCCACACTACACGCACAAAAACCGGTGAGAACGAGAGCGCGCGCGCGCTCGTGCTC GGGCGTCCGCCCACGCGTCCGCGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)