cluster # 8511

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Anopheles gambiae
cluster # 8511 cluster # 8511 Sequences # 10 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8511#0 length = 989 sequences # 3
consensus_8511#1 length = 747 sequences # 2
consensus_8511#2 length = 688 sequences # 2

consensus_8511#3 length = 653 sequences # 1
consensus_8511#4 length = 645 sequences # 1
consensus_8511#5 length = 552 sequences # 1

consensusID : consensus_8511#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 989
fasta sequence

                              [ACTATCCTTTACTTTTACTGCGTTGATATTCCTCTCTTTTGGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAACTTCGTATTCATAAGTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCAAACAATCCGTGTGTGGCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACACTATACTAAATTACATTCAAATTGTGTAGGATTTCGAAACACCCAGTTGGAGGTGGTAGATCCATGAGGACATGTGCGATATTGTGTCGAATTCCTCCACCCTCCACTGTGTGTAGATATTATTGCGTGGACAGAGAACAACGCCTCGGGAAGGTGTTTCCGGTTTGGCGTGTTTTCGTCATTTTAGTAGTGTTTGGGATTTTCAGCAGAACGA-CCCTTTTTTCAGCAGCTGCAGGATACTGGAATGCGTTCTTCGCTAGAAGCAAAACAAAGAGCGAAGGCCTTACAATAGTGTATAAAACGTGCTCTAGTGTTTAAACGTTTCGGAAGGGGAGTGTGAGCGCTGCGTTACAACTTGTATACTCTGCATACCGGGCGGCAGTCTCGCGATGAAGAAACTTACTTGAAGCTTTGTACAAATGCATAAACAATAAATGTTAGTATTTTCG]

[+] EMBL CNS09JZP             [ACTATCCTTTACTTTTACTGCGTTGATATTCCTCTCTTTTGGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAACTTCGTATTCATAAGTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCAAACAATCCGTGTGTGGCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACACTATACTAAATTACATTCAAATTGTGTAGGATTTCGAAACACCCAGTTGGAGGTGGTAGATCCATGAGGACATGTGCGATATTGTGTCGAATTCCTCCACCCTCCACTGTGTGTAGATATTATTGCGTGGACAGAGAACAACGCCTCGGGAAGGTGTTTCCGGTTTGGCGTGTTTTCGTCATTTTAGTAGTGTTTGGGATTTTCAGCAGAACGA CCCTTTTTTCAGCAGCTGCAGGATACTGGAATGCGTTCTTCGCTAGAAGCAAAACAAAGAGCGAAGGCCTTACAATAGTGTATAAAACGTGCTCTAGTGTTTAAACGTTTCGGAAGGGGAGTGTGAGCGCTGCGTTACAACTTGTATACTCTGCATACCGGGCGGCAGTCTCGCGATGAAGAAACTTACTTGAAGCTTTGTACAAATGCATAAACAATAAATGTTAGTATTTTCG]
[-] EMBL CNS09JZQ             [                                   CTTTTGGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAACTTCGTATTCATAAGTCTCCAACAAGCATAAAAAAAACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCAAACAATCCGTGTGTGGCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAAAAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACACTATACTAAATTACATTCAAATTGTGTAGGATTTCGAAACACCCAGTTGGAGGTGGTAGATCCATGAGGACATGTGCGATATTGTGTCGAATTCCTCCACCCTCCACTGTGTGTAGATATTATTGCGTGGACAGAGAACAACGCCTCGGGAAGGTGTTTCCGGTTTGGCGTGTTTTCGTCATTTTAGTAGTGTTTGGGATTTTCAGCAGAACGA CCCTTTTTTCAGCAGCTGCAGGATACTGGAATGCGTTCTTCGCTAGAAGCAAAACAAAGAGCGAAGGCCTTACAATAGTGTATAAAACGTGCTCTAGTGTTTAAACGTTTCGGAAGGGGAGTGTGAGCGCTGCGTTACAACTTGTATACTCTGCATACCGGGCGGCAGTCTCGCGATGAAGAAACTTACTTGAAGCTTTGTACAAATGCATAAACAATAAATGTTA         ]
[+] EMBL BX608208             [                                                                                                      AACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCATCGTATTCATAAGTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCTGTGACTAAAACAAGAAACAGAAAATAATGTACATTTTAAATCGTAGAACCAAACAATCCGTGTGTGGCCGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGCAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTG   TTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACACTATACTAAATTACATTCAAATTGTGTAGGATTTCGAAACACCCAGTTGGAGGTGGTAGATCCATGAGGACATGTGCGATATTGTGTCGAACTCCTCCACCCTCAACTGTGTGTAGACATTATTGCGCGGACAGGGAACAACGCCTCGGGAAGGTGTTTCCGGTATGGCGTGTTTTCGTCTTTTTAGTAGTGTTTGGGATT    GC GAACAACCCCTTTTTTCAGCAGCTGCAGGATACTGGAATGCGTTCTTCGCTAGAAGCAAAACAAAGAGCGAAGGCCTTACAATAGTGTATAAATCGTGCTCTA                                                                                                                                           ]




>consensus_8511#0
ACTATCCTTTACTTTTACTGCGTTGATATTCCTCTCTTTTGGATTCTCTCATCTGCTGAC
AAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATG
TGAATCGAATTTTATGACCCCGTTTAACCAACTTCGTATTCATAAGTCTCCAACAAGCAT
CACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCAGTGACT
AAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCAAACAATCCGTGTGTG
GCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGAAAT
GTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAA
TTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGA
AAGTGTTTGTTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACA
CTATACTAAATTACATTCAAATTGTGTAGGATTTCGAAACACCCAGTTGGAGGTGGTAGA
TCCATGAGGACATGTGCGATATTGTGTCGAATTCCTCCACCCTCCACTGTGTGTAGATAT
TATTGCGTGGACAGAGAACAACGCCTCGGGAAGGTGTTTCCGGTTTGGCGTGTTTTCGTC
ATTTTAGTAGTGTTTGGGATTTTCAGCAGAACGACCCTTTTTTCAGCAGCTGCAGGATAC
TGGAATGCGTTCTTCGCTAGAAGCAAAACAAAGAGCGAAGGCCTTACAATAGTGTATAAA
ACGTGCTCTAGTGTTTAAACGTTTCGGAAGGGGAGTGTGAGCGCTGCGTTACAACTTGTA
TACTCTGCATACCGGGCGGCAGTCTCGCGATGAAGAAACTTACTTGAAGCTTTGTACAAA
TGCATAAACAATAAATGTTAGTATTTTCG

consensusID : consensus_8511#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 747
fasta sequence

                              [CACTGGCAGCCGTCATCGGGCATGTGCCGTGCAATCCGCACGTGCCGACCTCGCTCGAGCTACCGATCACCGTTACCAATCCGGTCATTGCGAAAACGAGCACCGCTAGCAGCAGACTCAATGCGACGGCACCGCTCTTTCCCCTGACGACGACGGCCGCTACGGTCGTTTCTTCGTTTGCGGACGCTATACCAGCTGCGGCAACCGTGGTCCTAGTGTCCGGAGCTGATGCCCCAGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCTTCGTATTCATAAGTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCAAACAATCCGTGTGTGGCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACACTATACTAAATTA]

[+] EMBL BX606480             [CACTGGCAGCCGTCATCGGGCATGTGCCGTGCAATCCGCACGTGCCGACCTCGCTCGAGCTACCGATCACCGTTACCAATCCGGTCATTGCGAAAACGAGCACCGCTAGCAGCAGACTCAATGCGACGGCACCGCTCTTTCCCCTGACGACGACGGCCGCTACGGTCGTTTCTTCGTTTGCGGACGCTATACCAGCTGCGGCAACCGTGGTCCTAGTGTCCGGAGCTGATGCCCCAGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCTTCGTATTCATAAGTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCAAACAATCCGTGTGTGGCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGCTAACAGTCATGACACTATACTAAATTA]
[+] EMBL BX618890             [                                                                                                                                                                                                                                          CAGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCATCGTATTCATAAGTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTTTAAGCCTCTGTGACTAAAACAAGAAACAGAAAATAATGTACATTTTAAATCGTAGAACCAAACAATCCGTGTGTGGCCGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGCAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACA                                                                                           ]




>consensus_8511#1
CACTGGCAGCCGTCATCGGGCATGTGCCGTGCAATCCGCACGTGCCGACCTCGCTCGAGC
TACCGATCACCGTTACCAATCCGGTCATTGCGAAAACGAGCACCGCTAGCAGCAGACTCA
ATGCGACGGCACCGCTCTTTCCCCTGACGACGACGGCCGCTACGGTCGTTTCTTCGTTTG
CGGACGCTATACCAGCTGCGGCAACCGTGGTCCTAGTGTCCGGAGCTGATGCCCCAGATT
CTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAAC
CGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCTTCGTATTCATAA
GTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTT
TAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACCA
AACAATCCGTGTGTGGCTGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTC
TTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACAT
GTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCG
TAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTCAAATTGATGTAAGGATTGTTAGGTGC
TAACAGTCATGACACTATACTAAATTA

consensusID : consensus_8511#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence

                              [ATTCCCCGAGGTTNTGATGGCAGCGATGAGGAACAGCGTGAACCAAACGAGAACCATCTGCTGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGCTACTAAACTCACCCGCAAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATGACGGTGCAGCAGCAGCAGCAGCAGAGCAGCAACAGCAGGTGGTGCAAGATGTGGTTCAGGGCCGTTCCTTCGATCAG-GAACAACACAG-AGGCTCACAGAGCGCGCAGCCCGTGTGCCACCGGCGGCAAATGGAGCCAACGGCCGGCCGGATAATGCGGTGAACTTGGCGGAGCATCATAATAGTAGTAGCAATAACGATAGTGGGATCGATACCAGCATGGCCGCCGGTGGTGTTGCGGCATGTGAAGCCGCTGCTGCCTCTAGTAGCGGTGAGGGTACACCGACCACCGTACGCCGGCCAATCGTCGAACGATAAGCGATCCGGCGAGTTTGATTTCAGACGTTTCTTTTGCCTGTGTGTGTGTGTTGTGAGTTCCCCCCGAAATCAGGCACATAATTATTACATGGAGCGCGAAGGTAGCTTGGAATTCTTAATACTTACACACCA]

[+] EMBL AL692949             [ATTCCCCGAGGTTNTGATGGCAGCGATGAGGAACAGCGTGAACCAAACGAGAACCATCTGCTGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGCTACTAAACTCACCCGCAAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATGACGGTGCAGCAGCAGCAGCAGCAGAGCAGCAACAGCAGGTGGTGCAAGATGTGGTTCAGGGCCGTTCCTTCGATCAG GAACAACACAG AGGCTCACAGAGCGCGCAGCCCGTGTGCCACC                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX621647             [                                                   AACCATCTGCTGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGCTACTAAACTCACCCGCAAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATGACGGAGCAGCAGCAGCAGCAGC  AGCAGCAACAGCAGGTGGTGCAAGATGTGGTTCAGGGCCGTTCCTTCGATCAGCGACCATCACAGCAGGCTCACAGAGCGCGCAG CCGTGTGCCACCGGCGGCAAATGGAGCCAACGGCCGGCCGGATAATGCGGTGAACTTGGCGGAGCATCATAATAGTAGTAGCAATAACGATAGTGGGATCGATACCAGCATGGCCGCCGGTGGTGTTGCGGCATGTGAAGCCGCTGCTGCCTCTAGTAGCGGTGAGGGTACACCGACCACCGTACGCCGGCCAATCGTCGAACGATAAGCGATCCGGCGAGTTTGATTTCAGACGTTTCTTTTGCCTGTGTGTGTGTGTTGTGAGTTCCCCCCGAAATCAGGCACATAATTATTACATGGAGCGCGAAGGTAGCTTGGAATTCTTAATACTTACACACCA]




>consensus_8511#2
ATTCCCCGAGGTTNTGATGGCAGCGATGAGGAACAGCGTGAACCAAACGAGAACCATCTG
CTGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTC
GTGCTCGATGGTGACATGCTACTAAACTCACCCGCAAACGAAGACGATGACGCAGATGAT
GATGATGGCATCGATGATGATCTGATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATG
ACGGTGCAGCAGCAGCAGCAGCAGAGCAGCAACAGCAGGTGGTGCAAGATGTGGTTCAGG
GCCGTTCCTTCGATCAGGAACAACACAGAGGCTCACAGAGCGCGCAGCCCGTGTGCCACC
GGCGGCAAATGGAGCCAACGGCCGGCCGGATAATGCGGTGAACTTGGCGGAGCATCATAA
TAGTAGTAGCAATAACGATAGTGGGATCGATACCAGCATGGCCGCCGGTGGTGTTGCGGC
ATGTGAAGCCGCTGCTGCCTCTAGTAGCGGTGAGGGTACACCGACCACCGTACGCCGGCC
AATCGTCGAACGATAAGCGATCCGGCGAGTTTGATTTCAGACGTTTCTTTTGCCTGTGTG
TGTGTGTTGTGAGTTCCCCCCGAAATCAGGCACATAATTATTACATGGAGCGCGAAGGTA
GCTTGGAATTCTTAATACTTACACACCA

consensusID : consensus_8511#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 653
fasta sequence

                              [AGGTAGCTTGGAATTCTTAATACTTACACACCACTATCCTTTACTTTTACTGCGTTGATATTCCTCTCTTTTGGGTAAAAAAATGTTGAAAGTATGGTTTGGTGCTGCTCCTCTGTAATTGCTACTCTATCTGTAAAACGTATTAATTTGTAATTAGAGTAGACATTGAAATCAAGTCGAGTCGAGCGAACCACACAAACCGCACACTGGTTTCTTTACTACGTAAACCATACGTGTGTGTGTATGTGCGTTTTCTTCTTTCGGAAGATTGTAATTGCTTTGTAATCGTGTTTTAGAGCAAACTTTAGTTAACTTGTTTACTTTAGCATTTCTGTTTCTCTTTCCCGTAACGCTTACTTCTTTTTAGTACATTTTTTTTCTTTACAAATTTCGTTCGGTTTAATTTTGTAAAACTCTTTACGTGTTTTTCTTTTACCTTTATTTTTTTTTCTTCTCTTGTCTATGTTTTGTTTTAGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCATCGTATTCATAAGTCTACNACAAGCATCACACACACATACACATAATTCGCTCGTGTGTTGCGCTT]

[+] EMBL BX626814             [AGGTAGCTTGGAATTCTTAATACTTACACACCACTATCCTTTACTTTTACTGCGTTGATATTCCTCTCTTTTGGGTAAAAAAATGTTGAAAGTATGGTTTGGTGCTGCTCCTCTGTAATTGCTACTCTATCTGTAAAACGTATTAATTTGTAATTAGAGTAGACATTGAAATCAAGTCGAGTCGAGCGAACCACACAAACCGCACACTGGTTTCTTTACTACGTAAACCATACGTGTGTGTGTATGTGCGTTTTCTTCTTTCGGAAGATTGTAATTGCTTTGTAATCGTGTTTTAGAGCAAACTTTAGTTAACTTGTTTACTTTAGCATTTCTGTTTCTCTTTCCCGTAACGCTTACTTCTTTTTAGTACATTTTTTTTCTTTACAAATTTCGTTCGGTTTAATTTTGTAAAACTCTTTACGTGTTTTTCTTTTACCTTTATTTTTTTTTCTTCTCTTGTCTATGTTTTGTTTTAGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACCGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCATCGTATTCATAAGTCTACNACAAGCATCACACACACATACACATAATTCGCTCGTGTGTTGCGCTT]




>consensus_8511#3
AGGTAGCTTGGAATTCTTAATACTTACACACCACTATCCTTTACTTTTACTGCGTTGATA
TTCCTCTCTTTTGGGTAAAAAAATGTTGAAAGTATGGTTTGGTGCTGCTCCTCTGTAATT
GCTACTCTATCTGTAAAACGTATTAATTTGTAATTAGAGTAGACATTGAAATCAAGTCGA
GTCGAGCGAACCACACAAACCGCACACTGGTTTCTTTACTACGTAAACCATACGTGTGTG
TGTATGTGCGTTTTCTTCTTTCGGAAGATTGTAATTGCTTTGTAATCGTGTTTTAGAGCA
AACTTTAGTTAACTTGTTTACTTTAGCATTTCTGTTTCTCTTTCCCGTAACGCTTACTTC
TTTTTAGTACATTTTTTTTCTTTACAAATTTCGTTCGGTTTAATTTTGTAAAACTCTTTA
CGTGTTTTTCTTTTACCTTTATTTTTTTTTCTTCTCTTGTCTATGTTTTGTTTTAGATTC
TCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAACC
GCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCATCGTATTCATAAG
TCTACNACAAGCATCACACACACATACACATAATTCGCTCGTGTGTTGCGCTT

consensusID : consensus_8511#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 645
fasta sequence

                              [GAATCCCCCGAGGTATCCGTGTGTGGCCGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGCAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTNGTCTCTTCAAATTGATGTAACGGATTGTTAGGTGCTAACAGGTCATGACACTATACTAAGATTACATTCAAATTGTGTAGGATTTCGAAAACACCAGATTGGCAGGTGGGTAGATCCATGAGGGACATGTGCGATATTGTGTCGAACTCCTCCAACCTCAACTGTGGTGTAAGGACATTTAATNTGCGACAGAGACCAAGCGGAACCAAACTGACCCTCAGCGGAACGCGGTTGGTATCATCCCAGGGTATTGGGCGCTTGTTANTACCCGGCTTCCCTATCTAGTACNTAAACGGCTNAAAGACTTGGTATNTGGGGAGCAATTTTGGCNCGAANCAAAACACGCCCGTATCTACTATTCCAAGCAAGCATGGCCACGGGCATNACCCTGGGCACACTTGCCGCTTTCCTTTCCGCCCTAGGCGACANGCC]

[+] EMBL AL696157             [GAATCCCCCGAGGTATCCGTGTGTGGCCGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGATTCTTAACGTATGGCAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTNGTCTCTTCAAATTGATGTAACGGATTGTTAGGTGCTAACAGGTCATGACACTATACTAAGATTACATTCAAATTGTGTAGGATTTCGAAAACACCAGATTGGCAGGTGGGTAGATCCATGAGGGACATGTGCGATATTGTGTCGAACTCCTCCAACCTCAACTGTGGTGTAAGGACATTTAATNTGCGACAGAGACCAAGCGGAACCAAACTGACCCTCAGCGGAACGCGGTTGGTATCATCCCAGGGTATTGGGCGCTTGTTANTACCCGGCTTCCCTATCTAGTACNTAAACGGCTNAAAGACTTGGTATNTGGGGAGCAATTTTGGCNCGAANCAAAACACGCCCGTATCTACTATTCCAAGCAAGCATGGCCACGGGCATNACCCTGGGCACACTTGCCGCTTTCCTTTCCGCCCTAGGCGACANGCC]




>consensus_8511#4
GAATCCCCCGAGGTATCCGTGTGTGGCCGGTGTGGTGTTGCGCTTGCGATTTTTTTAGTT
GGCACGATTCTTAACGTATGGCAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTT
TTTAGCACATGTTTTAGGGAAACAATTACGTACCGATCGGTATCGGTCGGCCCCGTTCAA
TGCACACTCGTAAATCAGGTAGAGAAAGTGTTNGTCTCTTCAAATTGATGTAACGGATTG
TTAGGTGCTAACAGGTCATGACACTATACTAAGATTACATTCAAATTGTGTAGGATTTCG
AAAACACCAGATTGGCAGGTGGGTAGATCCATGAGGGACATGTGCGATATTGTGTCGAAC
TCCTCCAACCTCAACTGTGGTGTAAGGACATTTAATNTGCGACAGAGACCAAGCGGAACC
AAACTGACCCTCAGCGGAACGCGGTTGGTATCATCCCAGGGTATTGGGCGCTTGTTANTA
CCCGGCTTCCCTATCTAGTACNTAAACGGCTNAAAGACTTGGTATNTGGGGAGCAATTTT
GGCNCGAANCAAAACACGCCCGTATCTACTATTCCAAGCAAGCATGGCCACGGGCATNAC
CCTGGGCACACTTGCCGCTTTCCTTTCCGCCCTAGGCGACANGCC

consensusID : consensus_8511#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 552
fasta sequence

                              [GGCAGAATCGCCACGAGNTTCAAACGAGAACATCTGCTGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGCTACTAAACTCACCCGCAAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATGACGGAGCAGCAGCAGCAGCAGCAGCAGCAACAGACAGGTGGTGCAAGATGTGGTTCAGGGCCGTTCCTTCGATCAGCGACCATCACAGCAGGCTCACAGAGCGCGCAGCCGTGTGCCACCGGCGGCAAATGGAGCCAACGGCCGGCCGGATAATGCGGTGAACTTAGGCGGAGCATCATAATAGTAGTAGCAATAACGATACGTGGGATCGATACCAGCATGGCCGACGGTGGCTAGTTGCGGCATGTGAAGCCGCTGCTGNCTCTAGTAGCGGTAGAGGGTACANCGAGCACCGTACGCCGGNCAAGTCGNACGAACGATAAGCGANCCGGCGAG]

[+] EMBL BX467226             [GGCAGAATCGCCACGAGNTTCAAACGAGAACATCTGCTGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGCTACTAAACTCACCCGCAAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATGACGGAGCAGCAGCAGCAGCAGCAGCAGCAACAGACAGGTGGTGCAAGATGTGGTTCAGGGCCGTTCCTTCGATCAGCGACCATCACAGCAGGCTCACAGAGCGCGCAGCCGTGTGCCACCGGCGGCAAATGGAGCCAACGGCCGGCCGGATAATGCGGTGAACTTAGGCGGAGCATCATAATAGTAGTAGCAATAACGATACGTGGGATCGATACCAGCATGGCCGACGGTGGCTAGTTGCGGCATGTGAAGCCGCTGCTGNCTCTAGTAGCGGTAGAGGGTACANCGAGCACCGTACGCCGGNCAAGTCGNACGAACGATAAGCGANCCGGCGAG]




>consensus_8511#5
GGCAGAATCGCCACGAGNTTCAAACGAGAACATCTGCTGTTGGCGAATGAGAACTCGAAC
TGTAGCGAAATCATTGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGCTACTA
AACTCACCCGCAAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTG
ATGATGGAGAACGAAAGTGAAGAGGATGGCGTAATGACGGAGCAGCAGCAGCAGCAGCAG
CAGCAACAGACAGGTGGTGCAAGATGTGGTTCAGGGCCGTTCCTTCGATCAGCGACCATC
ACAGCAGGCTCACAGAGCGCGCAGCCGTGTGCCACCGGCGGCAAATGGAGCCAACGGCCG
GCCGGATAATGCGGTGAACTTAGGCGGAGCATCATAATAGTAGTAGCAATAACGATACGT
GGGATCGATACCAGCATGGCCGACGGTGGCTAGTTGCGGCATGTGAAGCCGCTGCTGNCT
CTAGTAGCGGTAGAGGGTACANCGAGCACCGTACGCCGGNCAAGTCGNACGAACGATAAG
CGANCCGGCGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8511#0      ------------------------------------------------------------
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      CACTGGCAGCCGTCATCGGGCATGTGCCGTGCAATCCGCACGTGCCGACCTCGCTCGAGC 60
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      ------------------------------------------------------------
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      TACCGATCACCGTTACCAATCCGGTCATTGCGAAAACGAGCACCGCTAGCAGCAGACTCA 120
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      ------------------------------------------------------------
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      ATGCGACGGCACCGCTCTTTCCCCTGACGACGACGGCCGCTACGGTCGTTTCTTCGTTTG 180
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      -----------------------------------------------------------A 1
                                                                                  

consensus_8511#0      ---------------ACTATCCTTTACTTTTACTGCGTTGATATTCCTCTCTTTTGGATT 45
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      CGGACGCTATACCAGCTGCGGCAACCGTGGTCCTAGTGTCCGGAGCTGATGCCCCAGATT 240
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      GGTAGCTTGGAATTCTTAATACTTACACACCACTATCCTTTACTTTTACTGCGTT-GATA 60
                                                                                  

consensus_8511#0      CTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAAC 105
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      CTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTACGCGTTGGGAGAGGAACCGCAAC 300
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      TTCCTCTCTTTTGGGTAAAAAAATGTTGAAAGTATGGTTTGGTGCT-GCTCCTCTGTAAT 119
                                                                                  

consensus_8511#0      CGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAACTTCGTATTCATAA 165
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      CGCAGCAATAGAATGTGAATCGAATTTTATGACCCCGTTTAACCAGCTTCGTATTCATAA 360
consensus_8511#2      ---------------------ATTCCCCGAGGTTNTGATGGCAGCGATGAGGAACAGCGT 39
consensus_8511#5      --------------------------------------------GGCAGAATCGCCACGA 16
consensus_8511#3      TGCTACTCTATC-TGTAAAACGTATTAATTTGTAATTAGAGTAGACATTGAAATCAAGTC 178
                                                                                  

consensus_8511#0      GTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTT 225
consensus_8511#4      ------------------------------------------------------------
consensus_8511#1      GTCTCCAACAAGCATCACACACACACATACACATAATTCGCTCGTGTGTTGCGCTTGTTT 420
consensus_8511#2      GAACCAAACGAGAACCATCTGC-TGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCAT 98
consensus_8511#5      GNTTCAAACGAGAAC-ATCTGC-TGTTGGCGAATGAGAACTCGAACTGTAGCGAAATCAT 74
consensus_8511#3      GAGTCGAGCGAACCACACAAAC-CGCACACTGGTTTCTTTACTACGTAAACCATACGTGT 237
                                                                                  

consensus_8511#0      -TAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACC 284
consensus_8511#4      -----------------------------------------------GAATCCC----CC 9
consensus_8511#1      -TAAGCCTCAGTGACTAAAACAAGAAGCAGAAAATAATGTACATTTTAAAACGTAGAACC 479
consensus_8511#2      -TGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGC--TACTAAACTCACCCGC 155
consensus_8511#5      -TGCCATCCAGCCGAACGTGGTCGTGCTCGATGGTGACATGC--TACTAAACTCACCCGC 131
consensus_8511#3      GTGTGTATGTGCGTTTTCTTCTTTCGGAAGATTGTAAT-TGC-TTTGTAATCGTGTTTTA 295
                                                                      ** *        

consensus_8511#0      AAACAATCCGTGTGTGGCTGGTG-TGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGAT 343
consensus_8511#4      GAGGTATCCGTGTGTGGCCGGTG-TGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGAT 68
consensus_8511#1      AAACAATCCGTGTGTGGCTGGTG-TGGTGTTGCGCTTGCGATTTTTTTAGTTGGCACGAT 538
consensus_8511#2      AAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAA 215
consensus_8511#5      AAACGAAGACGATGACGCAGATGATGATGATGGCATCGATGATGATCTGATGATGGAGAA 191
consensus_8511#3      GAGCAAACTTTAGTTAACTTGTT-TACTTTAGCATTTCTGTTTCTCTTTCCCGTAACGCT 354
                       *   *           *   *  *  *   *   *      *    *         *  

consensus_8511#0      TCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTT-TAGCA 402
consensus_8511#4      TCTTAACGTATGGCAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTT-TAGCA 127
consensus_8511#1      TCTTAACGTATGGAAATGTTAAGAGATTCTATAGATTTAGCATGAGTATGTTTT-TAGCA 597
consensus_8511#2      CGAAAGTGAAGAGGATGGCGTAATGACGGTGCAGCAGCAGCAGCAGCAGAGCAG-CAACA 274
consensus_8511#5      CGAAAGTGAAGAGGATGGCGTAATGACGGAGCAGCAGCAGCAGCAGCA--GCAG-CAACA 248
consensus_8511#3      TACTTCTTTTTAGTA-CATTTTTTTTCTTTACAAATTTCGTTCGGTTTAATTTTGTAAAA 413
                                  * *                 *      *                *  *

consensus_8511#0      -------CATGTTTTA-GGGAAACAATTACGTACCGATCGGTATCGGTCG--GCCCCGTT 452
consensus_8511#4      -------CATGTTTTA-GGGAAACAATTACGTACCGATCGGTATCGGTCG--GCCCCGTT 177
consensus_8511#1      -------CATGTTTTA-GGGAAACAATTACGTACCGATCGGTATCGGTCG--GCCCCGTT 647
consensus_8511#2      G------CAGGTGGTGCAAGATGTGGTTCAGGGCCGTTC--CTTCGATCA--G-GAACAA 323
consensus_8511#5      GA-----CAGGTGGTGCAAGATGTGGTTCAGGGCCGTTC--CTTCGATCA--GCGACCAT 299
consensus_8511#3      CTCTTTACGTGTTTTT-CTTTTACCTTTATTTTTTTTTCTTCTCTTGTCTATGTTTTGTT 472
                             *  **  *           **         **        **   *       

consensus_8511#0      CAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTTTCAAATTGATGTAA 512
consensus_8511#4      CAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTNGTCTCTT----CAAATTGATGTAA 233
consensus_8511#1      CAATGCACACTCGTAAATCAGGTAGAGAAAGTGTTTGTTTTTTTTT-CAAATTGATGTAA 706
consensus_8511#2      CACAG-AGGCTCACAGAGCGCGCAGCCCGTGTGCCACCGGCGG----CAAATGGAGCCAA 378
consensus_8511#5      CACAGCAGGCTCACAGAGCGCGCAGCC-GTGTGCCACCGGCGG----CAAATGGAGCCAA 354
consensus_8511#3      TTAGATTCTCTCATCTGCTGACAAGTGAAAAATGGAACATTTTA---CGCGTTGGGAGAG 529
                               ***           **                      *   * *    * 

consensus_8511#0      -GGATTGTTAGGTGCT------AACAG--TCATGACACTATACTAA-ATTA-CATTCAAA 561
consensus_8511#4      CGGATTGTTAGGTGCT------AACAG-GTCATGACACTATACTAAGATTA-CATTCAAA 285
consensus_8511#1      -GGATTGTTAGGTGCT------AACAG--TCATGACACTATACTAA-ATTA--------- 747
consensus_8511#2      CGGCCGGCCGGATAATGCGGTGAACTT-GGCGGAGCATCATAATAGTAGTAGCAATAACG 437
consensus_8511#5      CGGCCGGCCGGATAATGCGGTGAACTTAGGCGGAGCATCATAATAGTAGTAGCAATAACG 414
consensus_8511#3      -GAACCGC-AACCGCAGC----AATAG-AATGTGAATCGAATTTTATGACCCCGTTTAAC 582
                       *    *               **               *   *                

consensus_8511#0      TTGTGTAGGATTTCGAAA-CACCCAGTTGG-AGGTGG-TAGATCCATGAGG-ACATGTGC 617
consensus_8511#4      TTGTGTAGGATTTCGAAAACACCAGATTGGCAGGTGGGTAGATCCATGAGGGACATGTGC 345
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      ATA-GTGGGA--TCGATACCAGCATGGCCGCCGGTGGT--GTTGCGGCATG--TGAAGCC 490
consensus_8511#5      ATACGTGGGA--TCGATACCAGCATGGCCGACGGTGGCTAGTTGCGGCATG--TGAAGCC 470
consensus_8511#3      CAGCATCGTATTCATAAGTCTACNACAAGCATCACACACACATACACATAATTCGCTCGT 642
                                                                                  

consensus_8511#0      GATATTGTGTCGAATTCCTCCACCCTCCACTGTG-TGTAGATATTATTG-CGTG-GACAG 674
consensus_8511#4      GATATTGTGTCGAACTCCTCCAACCTCAACTGTGGTGTAAGGACATTTAATNTGCGACAG 405
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      GCTGCTGCCTCTAGTAGCGGT-GAGGGTACACCGACCACCGTACGCCGGCCAA-TCGT-- 546
consensus_8511#5      GCTGCTGNCTCTAGTAGCGGTAGAGGGTACANCGAGCACCGTACGCCGGNCAAGTCGNA- 529
consensus_8511#3      G-TGTTGCGCTT------------------------------------------------ 653
                                                                                  

consensus_8511#0      AGAACAACGCCTCGGGAAGGTGTTTC-CGGTTTGGCGTGTTTT-CGTCATTTTAGTAGTG 732
consensus_8511#4      AGACCAA-GCGGAACCAAACTGACCCTCAGCGGAACGCGGTTGGTATCATCCCAG-GGTA 463
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      CGAACGATAAGCGATCCGGCGAGTTTGATTTCAGACGTTTCTTTTGCCTGTGTGTGTGTG 606
consensus_8511#5      CGAACGATAAGCGANCCGGCGAG------------------------------------- 552
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      TTTGGGATTT-TCAGCAGAACGACCCTTTTTTCAGCAGCTGCAGGATACTGGAATGCGTT 791
consensus_8511#4      TTGGGCGCTTGTTANTACCCGGCTTCCCTATCTAGTACNTAAACGG--CTNAAAGACTTG 521
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      TTGTGAGTTCCCCCCGAAATCAGGCACATAATTATTACATGGAGCGCGAAGGTAGCTTGG 666
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      CTTCGCTAGAAGCAAAACAAAGAGCGAAGGCCTTACAATAGTGTATAAAACGTGCTCTAG 851
consensus_8511#4      GTATNTGGGGAGCAATTTTGGCNCGAANCAAAACACGCCCGTATCTAC----TATTCCAA 577
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      AATTCTTAATACTTACACACCA-------------------------------------- 688
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      TGTTTAAACGTTTCGGAAGGGGAGTGTGAGCGCTGCGTTACAACTTGTATACTCTGCATA 911
consensus_8511#4      -GCAAGCATGGCCACGGGCATNACCCTGGGCACAC--TTGCCGCTT---TCCTTTCCGCC 631
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      CCGGGCGGCAGTCTCGCGATGAAGAAACTTACTTGAAGCTTTGTACAAATGCATAAACAA 971
consensus_8511#4      CTAGGCGACANGCC---------------------------------------------- 645
consensus_8511#1      ------------------------------------------------------------
consensus_8511#2      ------------------------------------------------------------
consensus_8511#5      ------------------------------------------------------------
consensus_8511#3      ------------------------------------------------------------
                                                                                  

consensus_8511#0      TAAATGTTAGTATTTTCG 989
consensus_8511#4      ------------------
consensus_8511#1      ------------------
consensus_8511#2      ------------------
consensus_8511#5      ------------------
consensus_8511#3      ------------------