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Anopheles gambiae
cluster # 8514 cluster # 8514       Sequences # 10       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8514#0 length = 1495 sequences # 3  
consensus_8514#1 length = 1084 sequences # 3  
consensus_8514#2 length = 813 sequences # 3  
consensus_8514#3 length = 665 sequences # 1  

consensusID : consensus_8514#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1495
fasta sequence
                              [CCGCAACTTGCAGTTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTCCCACGCTTGCCGATGCGATGCAGAATGGAAAATCGATCTGCTCCGAGCTGCAGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGAAACCGACCGTCACCTCGATGGTACTGGACCGACAGGGCCCGCACGTCAGCACGCTGGTGCAGAAGATGAAACAGATTACGCGCTTCTTTCACAACCGGCACGCCGTGTCCGGGTTCGTCCAGTTCTGGGTACTGTTCCGGCTGATGTGGACCAAAATCATACGCAACCGGACAGTGCTGTGGATTCAGCTGGTACATCACATTGCTTGTGGAATATTTATCGGCCTTATTTTCCTGAATGCAGCCAACGACGGTGCACGCATGTTCGATCATCTCAAGTTCTGTCTTGGAGTGTGTTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTCTGAGCTATCCGCGGGAAGTGAAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACGGACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTCAACATTGTGTTCACCCTGCTCGTGTACTGGCTGTCGGGTTTGCCACCAGAGCTGTTCCGCTATTGCCTGTTTGCGCTTGTCGGCATCATCGTTTCGCTGTGTGCGGAAGGATTTGGCCTCATGATTGGTGCCACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACTAACGATAGCACCATTCCTTGGGTTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCCCGTACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTGTCGTCTCGGTCGTGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAA-GTTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCGAGCTTACCATCCTGATCTCGATGACGCTCTTCTACCGGCTGGTGTGCTACCTGAGCCTGCGGAGACGGTTCTACAAGTAACAGGACGACGTTGACGTTCGTTTGAGCCCACGTGACGCAAAAACCACAATGTGATCCTATCGATAACGGTTGACCGTATCGAGAGTTTTAATTTTTCTTCGTTTTAAGGCTAAGCCAACTATCTCCTCATGCGTTGGTTGGGTTTCACTTACAATCGTGCGTGTAACTTTTGCACGACAAAAACACAGGCCCATTCACGCATCCAAGACTTCCATCTACTACAGTACAGTAGCGAGCGTTAGTGTAAGAGACTTTGTATCTTTCCTTTTGTTTTCTTTTTATCGTAGATTATAGTAGGGACAGGGGCTTTTACTAGACGAATCCAAAGTACTATTGACAAGCAAAGGAAAGTCTCTCTC]

[+] EMBL BM580122             [CCGCAACTTGCAGTTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTCCCACGCTTGCCGATGCGATGCAGAATGGAAAATCGATCTGCTCCGAGCTGCAGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGAAACCGACCGTCACCTCGATGGTACTGGACCGACAGGGCCCGCACGTCAGCACGCTGGTGCAGAAGATGAAACAGATTACGCGCTTCTTTCACAACCGGCACGCCGTGTCCGGGTTCGTCCAGTTCTGGGTACTGTTCCGGCTGATGTGGACCAAAATCATACGCAACCGGACAGTGCTGTGGATTCAGCTGGTACATCACATTGCTTGTGGAATATTTATCGGCCTTATTTTCCTGAATGCAGCCAACGACGGTGCACGCATGTTCGATCATCTCAAGTTCTGTCTTGGAGTGTGTTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTCTGAGCTATCCGCGGGAAGTGAAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACGGACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09HZ6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTCAACATTGTGTTCACCCTGCTCGTGTACTGGCTGTCGGGTTTGCCACCAGAGCTGTTCCGCTATTGCCTGTTTGCGCTTGTCGGCATCATCGTTTCGCTGTGTGCGGAAGGATTTGGCCTCATGATTGGTGCCACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACTAACGATAGCACCATTCCTTGGGTTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCCCGTACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTGTCGTCTCGGTCGTGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAA GTTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCGAGCTTACCATCCTGATCTCGATGACGCTCTTCTACCGGCTGGTGTGCTACCTGAGCCTGCGGAGACGGTTCTACAAGTAACAGGACGACGTTGACGTTCGTTTGAGCCCACGTGACGCAAAAACCACAATGTGATCCTATCGATAACGGTTGACCGTATCGAGAGTTTTAATTTTTCTTCGTTTTAAGGCTAAGCCAACTATCTCCTCATGCGTTGGTTGGGTTTCACTTACAATCGTGCGTGTAACTTTTGCACGACAAAAACACAGGCCCATTCACGCATCCAAGACTTCCATCTACTACAGTACAGTAGCGAGCGTTAGTGTAAGAGACTTTGTATCTTTCCTTTTGTTTTCTTTTTATCGTAGATTATAGTAGGGACAGGGGCTTTTACTAGACGAATCCAAAGTACTATTGACAAGCAA               ]
[+] EMBL BX616351             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTGTCGTCTCGTTCGTGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAAGGTTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCGAGCTTACCATCCTGATCTCGATGACGCTCTTCTACCGGCTGGTGTGCTACCTGAGCCTGCGGAGACGGTTCTACAAGTAACAGTACGACGTTGACGTTCTTTTGAGCCCACGTGACGCAAAAACCACAATGTGATCCTATCGATAACGGTTGACCGTATCGAGAGTTTTAATTTTTCTTCGTTTTAAGGCTAAGCCAACTATCTCCTCATGCGTTGGTTGGGTTTCACTTACAATCGTGCGTGTAACTTTTGCACGACAAAAACACAGGCCCATTCACGCATCCAAGACTTCCATCTACTACAGTACAGTAGCGAGCGTTAGTGTAAGAGACTTTGTATCTTTCCTTTTGTTTTCTTTTTATCGTAGATTATAGTAGGGACAGGGGCTTTTACTAGACGAATCCAAAGTACTATTGACAAGCAAAGGAAAGTCTCTCTC]


>consensus_8514#0 CCGCAACTTGCAGTTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTCCCACGCTT GCCGATGCGATGCAGAATGGAAAATCGATCTGCTCCGAGCTGCAGCTAACGGGGGCTGGT GCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGCTGGAGCCG GTCGGCGAGTTCGTCCTGAAACCGACCGTCACCTCGATGGTACTGGACCGACAGGGCCCG CACGTCAGCACGCTGGTGCAGAAGATGAAACAGATTACGCGCTTCTTTCACAACCGGCAC GCCGTGTCCGGGTTCGTCCAGTTCTGGGTACTGTTCCGGCTGATGTGGACCAAAATCATA CGCAACCGGACAGTGCTGTGGATTCAGCTGGTACATCACATTGCTTGTGGAATATTTATC GGCCTTATTTTCCTGAATGCAGCCAACGACGGTGCACGCATGTTCGATCATCTCAAGTTC TGTCTTGGAGTGTGTTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTCTGAGCTAT CCGCGGGAAGTGAAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACGGACTGTTTCCT TACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTCAACATTGTGTTC ACCCTGCTCGTGTACTGGCTGTCGGGTTTGCCACCAGAGCTGTTCCGCTATTGCCTGTTT GCGCTTGTCGGCATCATCGTTTCGCTGTGTGCGGAAGGATTTGGCCTCATGATTGGTGCC ACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACTAACGATAGCACCATTCCTTGGG TTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCCCGTACTCATGCAGTGGCTGATG CGTGTGTCCTTCATCCGTGGTGGTGTCGTCTCGGTCGTGCTGGTTGTGTTCGGCTACAAC CGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAAGTTCTGCTGC ATTACGTGCGCATCGACAACACCACGCTACTGTTCGAGCTTACCATCCTGATCTCGATGA CGCTCTTCTACCGGCTGGTGTGCTACCTGAGCCTGCGGAGACGGTTCTACAAGTAACAGG ACGACGTTGACGTTCGTTTGAGCCCACGTGACGCAAAAACCACAATGTGATCCTATCGAT AACGGTTGACCGTATCGAGAGTTTTAATTTTTCTTCGTTTTAAGGCTAAGCCAACTATCT CCTCATGCGTTGGTTGGGTTTCACTTACAATCGTGCGTGTAACTTTTGCACGACAAAAAC ACAGGCCCATTCACGCATCCAAGACTTCCATCTACTACAGTACAGTAGCGAGCGTTAGTG TAAGAGACTTTGTATCTTTCCTTTTGTTTTCTTTTTATCGTAGATTATAGTAGGGACAGG GGCTTTTACTAGACGAATCCAAAGTACTATTGACAAGCAAAGGAAAGTCTCTCTC



consensusID : consensus_8514#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1084
fasta sequence
                              [CCGCCCACGCGTCCGCAACCCGTCCGGTACACTTCGGTCCCGGCAGTCGGCGGACTCTTCGTTCCGAGCTCGAGAAAACACGCGGTCACACACAGGCGGGAGGTTTCCGTGTGCGGTGGTTGGTTGTGAGAATCGAGACGAAGAAAATCGTGTAC--GTGTGTGTGTGTTATGTGATTGTGTTTATGTGTGTGAGTGTTTGACGAACAAAAAACATCACATAATTGAAGAAAAAAACAACGCGGACATGGATTGATGGAATACGCCTTAGCAGAAGGAAGTTTCGTCGTAGCGTGTCGTACAGCGTACAGGTGTAATTTAAATAATCCTTTAAAAAACTCTAAAGTTGAATCGAGAACAAGAACAAAACACACAAACCCAAAGGCAGAACATTCCCGGACGAGCGTGTGTGTGTGTGTGTGTGTCCCATCCGGCAGTTGGCCGCTTAAAGTGCACTCGACAGCACCGGCAACAATC-ACCACCGTGGCTTCAAGATGAAAGACGTCGAGTTCCAAGACATCGAGTATGCGGTCAACGTACGCAAAAGTTTCCTAAGTGAAAGTCACAAACGGACGATACTGAAGGGCGTCAGCGGTGTCTTCCGGCATGGACAGTTAACCGCAATTATGGGTCCCTCGGGCGCGGGTAAAAGCAGCCTGCTGAACGCAATCTCTGGCTATCGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAGAAGGCGTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGAGTTGATGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGAGCAT]

[+] EMBL BM626886             [CCGCCCACGCGTCCGCAACCCGTCCGGTACACTTCGGTCCCGGCAGTCGGCGGACTCTTCGTTCCGAGCTCGAGAAAACACGCGGTCACACACAGGCGGGAGGTTTCCGTGTGCGGTGGTTGGTTGTGAGAATCGAGACGAAGAAAATCGTGTAC  GTGTGTGTGTGTTATGTGATTGTGTTTATGTGTGTGAGTGTTTGACGAACAAAAAACATCACATAATTGAAGAAAAAAACAACGCGGACATGGATTGATGGAATACGCCTTAGCAGAAGGAAGTTTCGTCGTAGCGTGTCGTACAGCGTACAGGTGTAATTTAAATAATCCTTTAAAAAACTCTAAAGTTGAATCGAGAACAAGAACAAAACACACAAACCCAAAGGCAGAACATTCCCGGACGAGCGTGTGTGTGTGTGTGTGTGTCCCATCCGGCAGTTGGCCGCTTAAAGTGCACTCGACAGCACCGGCAACAATC ACCACCGTGGCTTCAAGATGAAAGACGTCGAGTTCCAAGACATCGAGTATGCGGTCAACGTACGCAAAAGTTTCCTAAGTGAAAGTCACAAACGGACGATACTGAAGGGCGTCAGCGGTGTCTTCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM619202             [                ccgCCGTCCGGTACACTTCGGTCCCGGCAGTCGGCGGACTCTTCGTTCCGAGCTCGAGAAAACACGCGGCCACACACAGGCGGGAGGTTTCCGTGTGCGGTGGTAGGTTGTGAGAATCGAAACGAAGAAAATCGTGAACGTGTGTGTGTGTGTTATGTGATTGTGTTTATGTGTGTGAGTGTTTGACGAACAAAAAACATCACATAATTGAAGAGA     AACGCGGACATGGATTGATGGAATACGCCTTAGCAGAAGGAAGTTTCGTCGTAGCGTGTCGTACAGCGTACAAGTGTAATTTAAATAATCCTTT AAAAAC CCAAAGTTGAATCGAGAACAAGAACAAAACACACAAACCCAAAGGCAGAACATTCCCGGACGAGC      GTGTGTGTGTGTGTCCCATCCGGCAGTTGGCCGCTTAAAGTGCACTCGACAGCACCAGCAACAATCAACCACCGTGGCTTCAAGATGAAAGACGTCGAGTTCCAAGACATCGAGTATGCGGTCAACGTACGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM614916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGGTCAACGTACGCAAAAGTTTCCTAAGTGAAAGTCACAAACGGACGATCCTGAAGGGCGTCAGCGGTGTCTTCCGGCATGGACAGTTAACCGCAATTATGGGTCCCTCGGGCGCGGGTAAAAGCAGCCTGCTGAACGCAATCTCTGGCTATCGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAGAAGGCGTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGAGTTGATGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGAGCAT]


>consensus_8514#1 CCGCCCACGCGTCCGCAACCCGTCCGGTACACTTCGGTCCCGGCAGTCGGCGGACTCTTC GTTCCGAGCTCGAGAAAACACGCGGTCACACACAGGCGGGAGGTTTCCGTGTGCGGTGGT TGGTTGTGAGAATCGAGACGAAGAAAATCGTGTACGTGTGTGTGTGTTATGTGATTGTGT TTATGTGTGTGAGTGTTTGACGAACAAAAAACATCACATAATTGAAGAAAAAAACAACGC GGACATGGATTGATGGAATACGCCTTAGCAGAAGGAAGTTTCGTCGTAGCGTGTCGTACA GCGTACAGGTGTAATTTAAATAATCCTTTAAAAAACTCTAAAGTTGAATCGAGAACAAGA ACAAAACACACAAACCCAAAGGCAGAACATTCCCGGACGAGCGTGTGTGTGTGTGTGTGT GTCCCATCCGGCAGTTGGCCGCTTAAAGTGCACTCGACAGCACCGGCAACAATCACCACC GTGGCTTCAAGATGAAAGACGTCGAGTTCCAAGACATCGAGTATGCGGTCAACGTACGCA AAAGTTTCCTAAGTGAAAGTCACAAACGGACGATACTGAAGGGCGTCAGCGGTGTCTTCC GGCATGGACAGTTAACCGCAATTATGGGTCCCTCGGGCGCGGGTAAAAGCAGCCTGCTGA ACGCAATCTCTGGCTATCGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAGAAGG CGTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGAGTTGA TGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAACGATCACGG AGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCG GCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCT TTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGCGTGCGGCTGC TGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGA GCAT



consensusID : consensus_8514#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 813
fasta sequence
                              [CCGCCCACGCGTCCGGTTGAATTTCGATCACCATCACCACCCTAGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAGAAGGCGTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGAGTTGATGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGAGCATTTTCGCACTGTTTGACCACATCTATGTGATTGCCCGCGGCCAGTGCGTGTACCAGGGCAATCCGAAGGCACTCGTACCCTTCCTAGCGCACCTGAACATCGAATGCCCTCGGCACTACAATCCAGCGGACTTTATTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTCCCACGCTTGCCGACGCGATGCAGAATGGAAAGTCGATCTGCT-----CTG-AGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGACACCGACCGTCACCTCGATGGTACTGGACCGACAGGGCCCGCACGTCAG]

[+] EMBL BM648028             [CCGCCCACGCGTCCGGTTGAATTTCGATCACCATCACCACCCTAGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAGAAGGCGTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGAGTTGATGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGAGCATTTTCGCACTGTTTGACCACATCTATGTGATTGCCCGCGGCCAGTGCGTGTACCAGGGCAATCCGAAGGCACTCGTACCCTTCCTAGCGCACCTGAACATCGAATGCCCTCGGCACTACAATCCAGCGGACTTTATTATTGAAATCTGTGATAGCGACACCCA                                                                                                                                                                                                               ]
[+] EMBL BM620542             [                                                                                   ccGCGTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGAGTTGATGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGAGCATTTTCGCACTGTTTGACCACATCTATGTGATTGCCCGCGGCCAGTGCGTGTACCAGGGCAATCCGAAGGCACTCGTACCCTTCCTAGCGCACCTGAACATCGAATGCCCTCGGCACTACAATCCAGCGGACTTTATTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTCCCACGCTTGCCGACGCGATGCAGAATGGAAAGTCGATCTGCT     CTG AGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGACACCGACCGTCACCTCGATGGTACTGGACCGACAG              ]
[+] EMBL BM576668             [                                                                                                                                                 ccGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCATGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCGCAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGGAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGTGACGGCAGCCAACTGTGTCCGGCTGTTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGTCTGCACGATTCATCAACCGTCGGCGAGCATTTTCGCACTGTTTGACCACATCTATGTGATTGCCCGCGGCCAGTGCGTGTACCAGGGCAATCCGAAGGCACTCGTTCCCTTCCTAGCGCACCTGAACATCGAATGCCCTCGGCACTACAATCCAGCGGACTTTATTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTCCCACGCTTGCCGATGCGATGCAGAATGGAAAATCGATCTGCTCCGAGCTGCAGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGAAACCGACCGTCACCTCGATGGTACTGGACCGACAGGGCCCGCACGTCAG]


>consensus_8514#2 CCGCCCACGCGTCCGGTTGAATTTCGATCACCATCACCACCCTAGTAAATCCGGTGTCCA GGGTACGGTACACCTGAACAAGAAGGCGTCGTGCTACATCACCCAGGAAGATCACCATCA ACCGATGCTGACGGTCGAGGAGTTGATGGCGATAGCATGCAAGCTTAAGATCAAGGACCA AACGGACTGCCAGGAAACGATCACGGAGGTACTGTCCAGCCTGAACCTGAACCATCGGCG CAATGTAACGGCCGAGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGA GATGGTTGCCAATCCGTCCGTCTTCTTTCTGGACGAACCGACCAGCGGTTTGGACGAGGT GACGGCAGCCAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGTCGT CTGCACGATTCATCAACCGTCGGCGAGCATTTTCGCACTGTTTGACCACATCTATGTGAT TGCCCGCGGCCAGTGCGTGTACCAGGGCAATCCGAAGGCACTCGTACCCTTCCTAGCGCA CCTGAACATCGAATGCCCTCGGCACTACAATCCAGCGGACTTTATTATTGAAATCTGTGA TAGCGACACCCAGGAACTGATTCCCACGCTTGCCGACGCGATGCAGAATGGAAAGTCGAT CTGCTCTGAGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGA GCACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGACACCGACCGTCACCTC GATGGTACTGGACCGACAGGGCCCGCACGTCAG



consensusID : consensus_8514#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence
                              [CCGCGGACGCGTGGGCGACGGTGCACGCATGTTCGATCATCTCAAGTTCTGTCTTGGAGTGTGCTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTCTGAGCTATCCGCGAGAAGTGAAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACGGACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTCAACATTGTGTTCACCCTGCTCGTGTACTGGCTGTCGGGTTTGCCACCAGAGCTGTTCCGCTATTGCCTGTTTGCGCTTGTCGGCATCATCGTTTCGCTGTGTGCGGAAGGATTTGGCCTCATGATTGGTGCCACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACTAACGATAGCACCATTCCTTGGGTTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCCCGTACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTGTCGTCTCGGTCGTGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAAGGTTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCGAGCTTACCATCCCTGATCTCGATGACGCTCTTCTACCGG]

[+] EMBL BM637366             [CCGCGGACGCGTGGGCGACGGTGCACGCATGTTCGATCATCTCAAGTTCTGTCTTGGAGTGTGCTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTCTGAGCTATCCGCGAGAAGTGAAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACGGACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTCAACATTGTGTTCACCCTGCTCGTGTACTGGCTGTCGGGTTTGCCACCAGAGCTGTTCCGCTATTGCCTGTTTGCGCTTGTCGGCATCATCGTTTCGCTGTGTGCGGAAGGATTTGGCCTCATGATTGGTGCCACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACTAACGATAGCACCATTCCTTGGGTTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCCCGTACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTGTCGTCTCGGTCGTGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAAGGTTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCGAGCTTACCATCCCTGATCTCGATGACGCTCTTCTACCGG]


>consensus_8514#3 CCGCGGACGCGTGGGCGACGGTGCACGCATGTTCGATCATCTCAAGTTCTGTCTTGGAGT GTGCTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTCTGAGCTATCCGCGAGAAGT GAAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACGGACTGTTTCCTTACTATCTTGC CCTAACACTGTCCCGGCTGCCCGTACAGCTGCTGCTCAACATTGTGTTCACCCTGCTCGT GTACTGGCTGTCGGGTTTGCCACCAGAGCTGTTCCGCTATTGCCTGTTTGCGCTTGTCGG CATCATCGTTTCGCTGTGTGCGGAAGGATTTGGCCTCATGATTGGTGCCACCTTTAACGT GATGAACGGTTCCGCCATCGGACCACTAACGATAGCACCATTCCTTGGGTTGGCCATCTA CGGGTTCGACTTTGCCCCTCAGATTCCCGTACTCATGCAGTGGCTGATGCGTGTGTCCTT CATCCGTGGTGGTGTCGTCTCGGTCGTGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCT CGAATGTGACGAGATGTACTGCCACTTTGACGATCCGAAGGTTCTGCTGCATTACGTGCG CATCGACAACACCACGCTACTGTTCGAGCTTACCATCCCTGATCTCGATGACGCTCTTCT ACCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8514#0      --------CCGCAACTTGCAGTTATTGAAATCTGTGATAGCGACACCCAGGAACTGATTC 52
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      CCGCCCACGCGTCCGCAACCCGTCCGGTACACTTCGGTCCCGGCAGTCGGCGGACTCTTC 60
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      CCACGCTTGCCGATGCGATGCAGAATGGAAAATCGATCTGCTCCGAGCTGCAGCTAACGG 112
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      GTTCCGAGCTCGAGAAAACACGCGGTCACACACAGGCGGGAGGTTTCCGTGTGCGGTGGT 120
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      GGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAGCACGAACCGTCCTCGC 172
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      TGGTTGTGAGAATCGAGACGAAGAAAATCGTGTACGTGTGTGTGTGTTATGTGATTGTGT 180
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      TGGAGCCGGTCGGCGAGTTCGTCCTGAAACCGACCGTCACCTCGATGGTACTGGACCGAC 232
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      TTATGTGTGTGAGTGTTTGACGAACAAAAAACATCACATAATTGAAGAAAAAAACAACGC 240
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      AGGGCCCGCACGTCAGCACGCTGGTGCAGAAGATGAAACAGATTACGCGCTTCTTTCACA 292
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      GGACATGGATTGATGGAATACGCCTTAGCAGAAGGAAGTTTCGTCGTAGCGTGTCGTACA 300
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      ACCGGCACGCCGTGTCCGGGTTCGTCCAGTTCTGGGTACTGTTCCGGCTGATGTGGACCA 352
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      GCGTACAGGTGTAATTTAAATAATCCTTTAAAAAACTCTAAAGTTGAATCGAGAACAAGA 360
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      AAATCATACGCAACCGGACAGTGCTGTGGATTCAGCTGGTACATCACATTGCTTGTGGAA 412
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ACAAAACACACAAACCCAAAGGCAGAACATTCCCGGACGAGCGTGTGTGTGTGTGTGTGT 420
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      TATTTATCGGCCTTATTTTCCTGAATGCAGCCAACGACGGTGCACGCATGTTCGATCATC 472
consensus_8514#3      ------------------CCGCGGACGC-GTGGGCGACGGTGCACGCATGTTCGATCATC 41
consensus_8514#1      GTCCCATCCGGCAGTTGGCCGCTTAAAGTGCACTCGACAGCACCGGCAACAATCACCACC 480
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      TCAAGTTCTGTCTTGGAGTGTGTTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTC 532
consensus_8514#3      TCAAGTTCTGTCTTGGAGTGTGCTTTTTCTTCTGCTACACCCAGGTCATGGTGCCAATTC 101
consensus_8514#1      GTGGCTTCAAGATGAAAGACGTCGAGTTCCAAGACATCGAGTATGCGGTCAACGTACGCA 540
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      TGAGCTATCCGCGGGAAGTG---AAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACG 589
consensus_8514#3      TGAGCTATCCGCGAGAAGTG---AAGTTGGTAAAGAAGGAATGCTTCAACCGCTGGTACG 158
consensus_8514#1      AAAGTTTCCTAAGTGAAAGTCACAAACGGACGATACTGAAGGGCGTCAGCGGTGTCTTCC 600
consensus_8514#2      ------------------------------------------------------------
                                                                                  

consensus_8514#0      GACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACA-GCTGC-TGCT 647
consensus_8514#3      GACTGTTTCCTTACTATCTTGCCCTAACACTGTCCCGGCTGCCCGTACA-GCTGC-TGCT 216
consensus_8514#1      GGCA--TGGACAGTTAACCGCAATTATGGGTCCCTCGGGCGCGGGTAAAAGCAGCCTGCT 658
consensus_8514#2      ----------------------------------CCGCCCACGCGTCCG-GTTGAATTTC 25
                                                         **    *  **    *  *  *   

consensus_8514#0      CAACATTGTGTTCACCCTGCTCGTGTACTGGCTGTCGGGTTTGC----CACCAGAGCTGT 703
consensus_8514#3      CAACATTGTGTTCACCCTGCTCGTGTACTGGCTGTCGGGTTTGC----CACCAGAGCTGT 272
consensus_8514#1      GAACGCAATCTCTGGCT--ATCGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAG 716
consensus_8514#2      GATCACCATCACCA-CC--CTAGTAAATCCGGTGTCCAGGGTACGGTACACCTGAACAAG 82
                       * *    *      *    * **  *   * ****  *  * *    **** ** *   

consensus_8514#0      TCCGCTATTGCCTGTTTGCGCTTGTCGGCATCATCGTT--TCGCTGTGTGCGG--AAGGA 759
consensus_8514#3      TCCGCTATTGCCTGTTTGCGCTTGTCGGCATCATCGTT--TCGCTGTGTGCGG--AAGGA 328
consensus_8514#1      AAGGC-GTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGA 775
consensus_8514#2      AAGGC-GTCGTGCTACATCACCCAGGAAGATCACCATCAACCGATGCTGACGGTCGAGGA 141
                         **  * *        * *        **** * *    ** **    ***   ****

consensus_8514#0      TTTGGCCTCATGATTG-GTGCCACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACT 818
consensus_8514#3      TTTGGCCTCATGATTG-GTGCCACCTTTAACGTGATGAACGGTTCCGCCATCGGACCACT 387
consensus_8514#1      GTTGA--TGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAAC- 832
consensus_8514#2      GTTGA--TGGCGATAGCATGCAAGCTTAAGATCAAGGACCAAACGGACTGCCAGGAAAC- 198
                       ***   *   *** *  *** * *** *     * ** *       *   * *   ** 

consensus_8514#0      AACGATAGCACCATTCCTTGGGTTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCC 878
consensus_8514#3      AACGATAGCACCATTCCTTGGGTTGGCCATCTACGGGTTCGACTTTGCCCCTCAGATTCC 447
consensus_8514#1      GATCACGGAGGTACTGTCCAGCCTGA--ACCTGAACCATCGGCGCAATGTAACGG--CCG 888
consensus_8514#2      GATCACGGAGGTACTGTCCAGCCTGA--ACCTGAACCATCGGCGCAATGTAACGG--CCG 254
                       *  *  *    * *     *  **   * **      *** *         * *   * 

consensus_8514#0      CGTACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTG-TCGTCTCGGTCG 937
consensus_8514#3      CGTACTCATGCAGTGGCTGATGCGTGTGTCCTTCATCCGTGGTGGTG-TCGTCTCGGTCG 506
consensus_8514#1      AGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATC 948
consensus_8514#2      AGCGACTGAGCGGCGGCGAACGAAAGCGACTCTCGATCGCGCTCGAGATGGTTGCCAATC 314
                       *       ** * ***  * *   * * *  **   ** * * * * * **  *     

consensus_8514#0      TGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACT 997
consensus_8514#3      TGCTGGTTGTGTTCGGCTACAACCGGGCCCGGCTCGAATGTGACGAGATGTACTGCCACT 566
consensus_8514#1      CGTCCGTCTTCTTTCTGGACGAACCGACCAG---CGGTTTGGACGAGGTG-ACGGCAGC- 1003
consensus_8514#2      CGTCCGTCTTCTTTCTGGACGAACCGACCAG---CGGTTTGGACGAGGTG-ACGGCAGC- 369
                       *   **  * **     ** * * * ** *   **  *  ****** ** ** **  * 

consensus_8514#0      TTGACGATCCGAAG-TTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCG 1056
consensus_8514#3      TTGACGATCCGAAGGTTCTGCTGCATTACGTGCGCATCGACAACACCACGCTACTGTTCG 626
consensus_8514#1      -CAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGT-CGTCTGCACG 1061
consensus_8514#2      -CAACTGCGTGCGGCTGCTGCGAGATCTTGCCCGCCAGGATCGTACCGT-CGTCTGCACG 427
                         **     *  * * ****   **   *  ***   **    ***   *  ***  **

consensus_8514#0      AGCTTACCATCC-TGATCTCGATGACGCTCTTCTACCGGCTGGTGTGCTACCTGAGCCTG 1115
consensus_8514#3      AGCTTACCATCCCTGATCTCGATGACGCTCTTCTACCGG--------------------- 665
consensus_8514#1      A-TTCATCAACC-----GTCGGCGAGCAT------------------------------- 1084
consensus_8514#2      A-TTCATCAACC-----GTCGGCGAGCATTTTCGCACTGTTTGACCACATCTATGTGATT 481
                      *  * * ** **      ***  **   *                               

consensus_8514#0      CGGAGACGGTTCTACAAGTAACAGGACGACGTTGACGTTCGTTTGAGCCCACGTGACGCA 1175
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ------------------------------------------------------------
consensus_8514#2      GCCCGCGGCCAGTGCGTGTACCAGGGCAATCCGAAGGCACTCGTACCCTTCCTAGCGCAC 541
                                                                                  

consensus_8514#0      AAAACCACAATGTGATCCTATCGATAACGGTTGACCGTATCGAGAGTTTTAATTTTTCTT 1235
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ------------------------------------------------------------
consensus_8514#2      CTGAACATCGAATGCCCTCGGCACTACAATCCAGCGGACTTTATTATTGAAATCTGTGAT 601
                                                                                  

consensus_8514#0      CGTTTTAAGGCTAAGCCAACTATCTCCTCATGCGTTGGTTGGGTTTCACTTACAATCGTG 1295
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ------------------------------------------------------------
consensus_8514#2      AGCGACACCCAGGAACTGATTCCCACGCTTGCCGACGCGATGCAGAATGGAAAGTCGATC 661
                                                                                  

consensus_8514#0      CGTGTAACTTTTGCACGACAAAAACACAGGCCCATTCACGCATCCAAGACTTCCATCTAC 1355
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ------------------------------------------------------------
consensus_8514#2      TGCTCTGAGCTAACGGGGGCTGGTGCTGCCAGCTCCGGACCCGCCTCGATCTCCTCCGAG 721
                                                                                  

consensus_8514#0      TACAGTACAGTAGCGAGCGTTAGTGTAAGAGACTTTGTATCTTTCCTTTTGTTTTCTTTT 1415
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ------------------------------------------------------------
consensus_8514#2      CACGAACCGTCCTCGCTGGAGCCGGTCGGCGAGTTCGTCCTGACACCGACCGTCACCTCG 781
                                                                                  

consensus_8514#0      TATCGTAGATTATAGTAGGGACAGGGGCTTTTACTAGACGAATCCAAAGTACTATTGACA 1475
consensus_8514#3      ------------------------------------------------------------
consensus_8514#1      ------------------------------------------------------------
consensus_8514#2      ATGGTACTGGACCGACAGGGCCCGCACGTCAG---------------------------- 813
                                                                                  

consensus_8514#0      AGCAAAGGAAAGTCTCTCTC 1495
consensus_8514#3      --------------------
consensus_8514#1      --------------------
consensus_8514#2      --------------------
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)