|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8548#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1129 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGGCGAGCGATGTTGGGCAGTGCGAGCGATACGAAGAAATTGCTGTCCGAGCGCGACCTGCTACGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGCCGCTCAAGTCGTTCTGCTACCGGCGGCTCAGCTACCTCTACTCCAAGTTCCAGCTGCACGTGCTGCTGAACGAGCTGCGCGAGCTGGCCTCGCAGAAAGCGGGTCCCGCACCGGGACTTCTACAACATCCGCAAGGTGGACACGCACATCCACGCGGCCAGCTGCATGAACCAGAAGCATCTGCTGCGCTTCATCAAGAAGACGCTGAAGAACAGCGCGGACGAGGTGGTGACGGTGACCAAGGGTACGCCGATGACGCTCGCGCAGGTCTTCCAGTCGATGAACCTGACCACGTACGACCTGACGGTGGACATGCTGGACGTGCACGCGGACCGCAACACCTTCCACCGGTTCGACAAGTTCAACGCGAAGTACAATCCGATCGGCGAGTCGCGGCTGCGCGAGGTGTTCCTCAAGACGGACAACTACCTGAACGGGAAGTACTTCGCGAACATCATCAAGGAGGTGGCGAGCGACTTCGAGGAGAGCAAGTACCAGAACGCGGAGCTGCGGCTCTCGATCTACGGCAAGTCG]
[+] EMBL BM589279 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGCGAGCGATGTTGGGCAGTGCGAGCGATACGAAGAAATTGCTGTCCGAGCGCGACCTGCTACGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGCCGCTCAAGTCGTTCTGCTACCGGCGGCTCAGCTACCTCTACTCCAAGTTCCAGCTGCACGTGCTGCTGAACGAGCTGCGCGAGCTGGCCTCGCAGAAAGCGGGTCCC ]
[+] EMBL BM612976 [ ccgCTCTACTCCAAGTTCCAGCTGCACGTGCTGCTGAACGAGCTGCGCGAGCTGGCCTCGCAGAAGGC GGTCCCGCACCGGGACTTCTACAACATCCGCAAGGTGGACACGCACATCCACGCGGCCAGCTGCATGAACCAGAAGCATCTGCTGCGCTTCATCAAGAAGACGCTGAAGAACAGCGCGGACGAGGTGGTGACGGTGACCAAGGGTACGCCGATGACGCTCGCGCAGGTCTTCCAGTCGATGAACCTGACCACGTACGACCTGACGGTGGACATGCTGGACGTGCACGCGGACCGCAACACCTTCCACCGGTTCGACAAGTTCAACGCGAAGTACAATCCGATCGGCGAGTCGCGGCTGCGCGAGGTGTTCCTCAAGACGGACAACTACCTGAACGGGAAGTACTTCGCGAACATCATCAAGGAGGTGGCGAGCGACTTCGAGGAGAGCAAGTACCAGAACGCGGAGCTGCGGCTCTCGATCTACGGCAAGTCG]
consensusID : consensus_8548#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 973 fasta sequence
[CCGGCTGTCGGTACTGGTGGACGCCCGGGACAACTATTGGGATTTTTTTTCCCACACATATCCTAGCCAAGTCCAACTACTCGAGAGAGAGCACAACCAAACACGCCATGAGCCAAAGGAAAAGGGAGATAAACTTTAACAAGCAGGACTCGCGCACCCTGCTGCAGGTGCTCGAGGACCAGAAGCTGATGGAGGCGATGAAGCAGTCGCGACTGGCGCTCGAGGGCAGGGCGTCCTTTGCGCCATTCGCGCTCGATGACGCCGACGAGCTCGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGCCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAGGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGTGGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTG]
[+] EMBL BM647990 [CCGGCTGTCGGTACTGGTGGACGCCCGGGACAACTATTGGG TTTTTTTTCCCACACATATCCTAGCCAAGTCCAACTACTCGAGAGAGAGCACAACCAAACACGCCATGAGCCAAAGGAAAAGGGAGATAAACTTTAACAAGCAGGACTCGCGCACCCTGCTGCAGGTGCTCGAGGACCAGAAGCTGATGGAGGCGATGAAGCAGTCGCGACTGGCGCTCGAGGGCAGGGCGTCCTTTGCGCCATTCGCGCTCGATGACGCCGACGAGCTCGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGTCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAAGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTG ]
[+] EMBL BM647939 [ ccGTGGACGCCCGGGACAACTATTGGGA TTTTTTTCCCACACATATCCTAGCCAAGTCCAACTACTCGAGAGAGAGCACAACCAAACACGCCATGAGCCAAAGGAAAAGGGAGATAAACTTTAACAAGCAGGACTCGCGCACCCTGCTGCAGGTGCTCGAGGACCAGAAGCTGATGGAGGCGATGAAGCAGTCGCGACTGGCGCTCGAGGGCAGGGCGTCCTTTGCGCCATTCGCGCTCGATGACGCCGACGAGCTCGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGCCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAGGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCA ]
[+] EMBL BM597010 [ ccGGACGCCCGGGACAACTATTGGGA TTTTTTTCCCACACATATCCTAGCCAAGTCCAACTACTCGAGAGAGAGCACAACCAAACACGCCATGAGCCAAAGGAAAAGGGAGATAAACTTTAACAAGCAGGACTCGCGCACCCTGCTGCAGGTGCTCGAGGACCAGAAGCTGATGGAGGCGATGAAGCAGTCGCGACTGGCGCTCGAGGGCAGGGCGTCCTTTGCGCCATTCGCGCTCGATGACGCCGACGAGCTCGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGCCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAGGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGA ]
[+] EMBL BM592305 [ ccgGCCCGGGACAACTATTGGGATTTTTTTTCCCACACATATCCTAGCCAAGTCCAACTACTCGAGAGAGAGCACAACCAAACACGCCATGAGCCAAAGGAAAAGGGAGATAAACTTTAACAAGCAGGACTCGCGCACCCTGCTGCAGGTGCTCGAGGACCAGAAGCTGATGGAGGCGATGAAGCAGTCGCGACTGGCGCTCGAGGGCAGGGCGTCCTTTGCGCCGTTCGCGCTCGATGACGCCGACGAGCTCGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGCCGGTGGAGGCGGTGGCGGCGGCGTCGGCCCTGCCGGT ]
[+] EMBL BM585083 [ cCGGGACATGCCGGTGCCGGTGGAGGCGGTGGCGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAGGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGTGGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTG]
consensusID : consensus_8548#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGCTCGAATCGTGCAGTCGTCGTGGTGGTCGCCGCCCCTGCTTTGTGCGTCCTGTGCCTGAACTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACACACACACCAACATACAGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGCCGCT]
[+] EMBL BM644897 [CCGCCCACGCGTCCGCCCACGCGTCCGGCTCGAATCGTGCAGTCGTCGTGGTGGTCGCCGCCCCTGCTTTGTGCGTCCTGTGCCTGAACTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACACACACACCAACATACAGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGAT ]
[+] EMBL BM601947 [ ccgGTCGTGGTGGTCGCCGCCCCTGCTTTGTGCGTCCTGTGCCTGAACTCTCCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCACACACACACACCAACATACAGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGGCGGTCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGCCGCT]
consensusID : consensus_8548#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence
[CCGCGCTGACGGCGATCAAAGATATCTGTGGATTTCTGTGACCATCGTGTGCGCGCGTTCTGCCGCCTCCTGAGGTTCCTGAGGTTGTTCGGACTGTGTGTTCTGTGTGTCTGTTTGTTTGTTTGTTTGCTTTGGCTCGCTCTTCCGGCCAGCAAATTCCAGTGTTGCAGTGTGCAACACTCGTGTGTGTGTGTGTTTTTTTTTGGAAATAACTAGTGAGGTCACAAGGTGCGCTAAAGATGAGTGCTCGCGGTGTGCTGCTGAAGTGCGATATGAACTCGTCGTTCGATCAACCGGATCCGGCAATCATGTCAATGTCGCCCCGATCACCCGCCATCCTGCTCAACGACTTCTTCTCACCGGAAGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGTCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAAGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGATGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATG]
[+] EMBL BM587734 [CCGCGCTGACGGCGATCAAAGATATCTGTGGATTTCTGTGACCATCGTGTGCGCGCGTTCTGCCGCCTCCTGAGGTTCCTGAGGTTGTTCGGACTGTGTGTTCTGTGTGTCTGTTTGTTTGTTTGTTTGCTTTGGCTCGCTCTTCCGGCCAGCAAATTCCAGTGTTGCAGTGTGCAACACTCGTGTGTGTGTGTGTTTTTTTTTGGAAATAACTAGTGAGGTCACAAGGTGCGCTAAAGATGAGTGCTCGCGGTGTGCTGCTGAAGTGCGATATGAACTCGTCGTTCGATCAACCGGATCCGGCAATCATGTCAATGTCGCCCCGATCACCCGCCATCCTGCTCAACGACTTCTTCTCACCGGAAGTACAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGTCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTGCACTCAGCCTCTCCCAAGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGATCGAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGATGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATG]
consensusID : consensus_8548#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 630 fasta sequence
[CCGGTGCGTCTCGGCGAGCGATGTTGGGCAGTGCGAGCGATACGAAGAAATGGCTGTCCGAGCGCGACCTGCTACGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGACGGCCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGGCGCTCAAGTCGTTCTGCTACCGGGGGGCTCAGCTACCTCTACTCCAAGTTC]
[+] EMBL BM580103 [CCGGTGCGTCTCGGCGAGCGATGTTGGGCAGTGCGAGCGATACGAAGAAATGGCTGTCCGAGCGCGACCTGCTACGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTCGATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCTGCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCCGCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCGCAAATCCATCGCGGACCATCCAGTCAATCCGCCCCAGAGCACGCAGTCGCCGTGGGTGGTGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGTTCCCGACGGCCGAGTCGACCGAACCGCTGCCCTACCAGTACACCCGCCTGCCCGACTTCGTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGGCGCTCAAGTCGTTCTGCTACCGGGGGGCTCAGCTACCTCTACTCCAAGTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8548#0 ------------------------------------------------------------
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 CCGGCTGTCGGTACTGGTGGACGCCCGGGACAACTATTGGGATTTTTTTTCCCACACATA 60
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ------------------------------------------------------------
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 TCCTAGCCAAGTCCAACTACTCGAGAGAGAGCACAACCAAACACGCCATGAGCCAAAGGA 120
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ------------------------------------------------------------
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 AAAGGGAGATAAACTTTAACAAGCAGGACTCGCGCACCCTGCTGCAGGTGCTCGAGGACC 180
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ------------------------------------------------------------
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 AGAAGCTGATGGAGGCGATGAAGCAGTCGCGACTGGCGCTCGAGGGCAGGGCGTCCTTTG 240
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ------------------------------------------------------------
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 CGCCATTCGCGCTCGATGACGCCGACGAGCTCGTACAGGGTAACGAGTCTCCGGCGGGAC 300
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ------------------------------------------------------------
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ---------------------------------------CCGCCCACGCGTCCGCCCACG 21
consensus_8548#1 ATGCCGGTGCCGGTGGAGGCGGTGGTGGCGGCGTCGGCCCTGCCGGTGTACTTAGCGGTG 360
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ---------------------------------------CCGCGGACGCGTGGG-CGGAC 20
consensus_8548#4 -------------------------------------------------------CCGGT 5
consensus_8548#2 CGTCCGGCTCGAATCGTGCAGTCGTCGTGGTGGTCGCCGCCCCTGCTTTGTGCGTCCTGT 81
consensus_8548#1 CACTCAGCCTCTCCCAGGAGGATATTGTGGGCGTGCTGCCGAACGAAATATCTGCCCCGT 420
consensus_8548#3 -------------------------------CCGCGCTGACGGCGATCAAAGATATCTGT 29
consensus_8548#0 GCGTGGGCGGCGAGCGATGT-TGGGCAGTGCGAGCGATACGAAGAAATTGCTGTCCGAGC 79
consensus_8548#4 GCGTCT-CGGCGAGCGATGT-TGGGCAGTGCGAGCGATACGAAGAAATGGCTGTCCGAGC 63
consensus_8548#2 GCCTGAACTCTCCTTCTTCT-TCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAC 140
consensus_8548#1 ACGAGG--TGCCCCAGTTCC-CGATCGAGCAGATCGA---GAAGAAGCTCCAGCTGCAGC 474
consensus_8548#3 GGATTT-CTGTGACCATCGTGTGCGCGCGTTCTGCCGCCTCCTGAGGTTCCTGAGGTTGT 88
* *
consensus_8548#0 GCG---ACCTGC-TAC-GGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCA 134
consensus_8548#4 GCG---ACCTGC-TAC-GGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCA 118
consensus_8548#2 ACACACACCAACATACAGGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCA 200
consensus_8548#1 GCCA--GCTGAACGCCAAGGTGATGGAGCAGGACCGGCACTCGATCGCACCGGAAGTCCA 532
consensus_8548#3 TCG---GACTGTGTGT---TCTGTGTGTCTGTTTGTTTGTTTGTTTGCTTTGGCTCGCTC 142
* ** * * * * * ** ** *
consensus_8548#0 CCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTC 194
consensus_8548#4 CCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTC 178
consensus_8548#2 CCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTC 260
consensus_8548#1 CCCGGACGAGCAGCTGCCGTTCGACGAGCATGACTTCGTCGCCCACTTTCAGCGCGTGTC 592
consensus_8548#3 TTCCGGCCAGCAAATTCCAGTGTTGCAGTGTG----CAACACTCG-TGTGTGTGTGTGTT 197
* * * **** * ** * ** ** * * * * * * * * ****
consensus_8548#0 GATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCT 254
consensus_8548#4 GATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCT 238
consensus_8548#2 GATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCT 320
consensus_8548#1 GATCTCGGGCGAGGACACCAGCGGCGTCCCGCTGGACGATCTCGAGCGGGCCTCCACGCT 652
consensus_8548#3 TTTTTTTGG--AAATAACTAGTGAGGTCACAAGGTGCGCTAAAGA-TGAGTGCTCGCGGT 254
* * ** * ** ** * *** * * ** * ** * * * ** *
consensus_8548#0 GCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCC 314
consensus_8548#4 GCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCC 298
consensus_8548#2 GCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCC 380
consensus_8548#1 GCTGGTGAAGGCGCTCGAGCTGCGCGAGAAGTACATGCGCAACTCGCACCAGGCGTTCCC 712
consensus_8548#3 G-TGCTGCTGAAGTGCGATATGAACTCGTCGTTC--GATCAAC-CGGATCCGGCAATCAT 310
* ** ** * * *** ** * * ** * * **** ** * * *** **
consensus_8548#0 GCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCG 374
consensus_8548#4 GCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCG 358
consensus_8548#2 GCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCG 440
consensus_8548#1 GCAGACGACCGCCCGCTTCCTCAAGTCGACCCACTCGAGCACGATCACGCACCAGGAGCG 772
consensus_8548#3 GTCAATGTCGCCCCGATCACCC--GCCATCCTGCTCAACGACTTCTTCTCACCGGAAGTA 368
* * * * **** * * * * * ** *** * ** * **** * **
consensus_8548#0 CAAATCCATCGCGGACCATCCAGTCAATCCGCC-CCAGAGCACGCAGTCGCCGTGGGTGG 433
consensus_8548#4 CAAATCCATCGCGGACCATCCAGTCAATCCGCC-CCAGAGCACGCAGTCGCCGTGGGTGG 417
consensus_8548#2 CAAATCCATCGCGGACCATCCAGTCAATCCGCC-CCAGAGCACGCAGTCGCCGTGGGTGG 499
consensus_8548#1 CAAATCCATCGCGGACCATCCAGTCAATCCGCC-CCAGAGCACGCAGTCGCCGTGGGTGG 831
consensus_8548#3 CAGGGTAACGAGTCTCCGGCGGGACATGCCGGTGTCGGTGGAGGCGGTGGTGGCGG-CGT 427
** * ** * * ** *** * * * * ** ** * * ** *
consensus_8548#0 TGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGT 493
consensus_8548#4 TGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGT 477
consensus_8548#2 TGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGGTGT 559
consensus_8548#1 TGGAGATACCGGAGGATCTGAACTACAGCATCCGCCCGGTGCACGGCGTGTTCGAGTGGT 891
consensus_8548#3 CGGCCCTGCCGGTGTACTT-AGCGGTGCACTCAGCCTCTCCCAAGAGGATATTGTGGGCG 486
** * **** * * * * * ** *** ** * * * * *
consensus_8548#0 TCCCGGCGGTCGAGTCGACCGAACCGC-TGCCCTACCAGTACACCCGCCTGCCCGACTTC 552
consensus_8548#4 TCCCGACGGCCGAGTCGACCGAACCGC-TGCCCTACCAGTACACCCGCCTGCCCGACTTC 536
consensus_8548#2 TCCCGGCGGTCGAGTCGACCGAACCGC-TGCCCTACCAGTACACCCGCCTGCCCGACTTC 618
consensus_8548#1 TCCCGGCGGTCGAGTCGACCGAACCGC-TGCCCTACCAGTACACCCGCCTGCCCGACTTC 950
consensus_8548#3 TGCTGCCGAACGAAATATCTGCCCCGTACGAGGTGCCCCAGTTCCCGATCGAGCAGAT-C 545
* * * ** *** * * *** * * ** **** * * * *
consensus_8548#0 GTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGCCGCTCAAGTCGTTCTGC 612
consensus_8548#4 GTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGGCGCTCAAGTCGTTCTGC 596
consensus_8548#2 GTGCAGGACATGCAGATGATGTGCTCGATGATAGCGGACGGGCCGCT------------- 665
consensus_8548#1 GTGCAGGACATGCAGATGATGTG------------------------------------- 973
consensus_8548#3 GAGAAGAAGCTCCAGCTGCAGCGCCAGCTGAACGCCAAGGTGATGGATGCAGGACCGGCA 605
* * ** * * *** ** * *
consensus_8548#0 TACCGGCGG-CTCAGCTACCTCTACTCCAAGTTCCAGCTGCACGTGCTGCTGAACGAGCT 671
consensus_8548#4 TACCGGGGGGCTCAGCTACCTCTACTCCAAGTTC-------------------------- 630
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 CTCGATCGCACCGGAAGTCCACCCGGACGAGCAGCTGCCGTTCGACGAGCATG------- 658
consensus_8548#0 GCGCGAGCTGGCCTCGCAGAAAGCGGGTCCCGCACCGGGACTTCTACAACATCCGCAAGG 731
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 TGGACACGCACATCCACGCGGCCAGCTGCATGAACCAGAAGCATCTGCTGCGCTTCATCA 791
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 AGAAGACGCTGAAGAACAGCGCGGACGAGGTGGTGACGGTGACCAAGGGTACGCCGATGA 851
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 CGCTCGCGCAGGTCTTCCAGTCGATGAACCTGACCACGTACGACCTGACGGTGGACATGC 911
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 TGGACGTGCACGCGGACCGCAACACCTTCCACCGGTTCGACAAGTTCAACGCGAAGTACA 971
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 ATCCGATCGGCGAGTCGCGGCTGCGCGAGGTGTTCCTCAAGACGGACAACTACCTGAACG 1031
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 GGAAGTACTTCGCGAACATCATCAAGGAGGTGGCGAGCGACTTCGAGGAGAGCAAGTACC 1091
consensus_8548#4 ------------------------------------------------------------
consensus_8548#2 ------------------------------------------------------------
consensus_8548#1 ------------------------------------------------------------
consensus_8548#3 ------------------------------------------------------------
consensus_8548#0 AGAACGCGGAGCTGCGGCTCTCGATCTACGGCAAGTCG 1129
consensus_8548#4 --------------------------------------
consensus_8548#2 --------------------------------------
consensus_8548#1 --------------------------------------
consensus_8548#3 --------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||