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Anopheles gambiae
cluster # 8568 cluster # 8568       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8568#0 length = 1216 sequences # 7  
consensus_8568#1 length = 1103 sequences # 3  
consensus_8568#2 length = 639 sequences # 1  

consensusID : consensus_8568#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1216
fasta sequence
                              [CCGATAAAAATTCAATAATCATACGATATGAGAGTAATGTGGGAGAAAGATTGCCTAACAAGAGGCACAAACACTCATAAAGCATAAACGTCTTTTTCCGGAACTGTAAGGAACCATCCACCTCATGCTTTAAGCAACGCGAAACAATGGCGCAACCATTCAAAG--------ACAGCACAGCACTGGTACACAAATGTAATAATCTCCACTTCACAAATCGCCTGACACAACTCTTACATTGGCAAAGCTCTTCGCGATATGTTTTAGTCTTTCCCTGTCCAAATGCA---TCTGGTCTGGTCTGACTATCTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAATCCCAGTGTTGAGACGGAGACTTGAGGCTCACGTTGCATGTTGACAATTTGGCGGAGTCAGCATCAACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACACACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAAT-GTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCT-TGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAGANGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAACCAACCAGAGAAGCAACAAATTACATATGGGAGGGGCGGGAAATAAATACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATATTCGGCGCAGCATAAC]

[+] EMBL BM609439             [CCGATAAAAATTCAATAATCATACGATATGAGAGTAATGTGGGAGAAAGATTGCCTAACAAGAGGCACAAACACTCATAAAGCATAAACGTCTTTTTCCGGAACTGTAAGGAACCATCCACCTCATGCTTTAAGCAACGCGAAACAATGGCGCAACCATTCAAAGACAAGACCACAGCACAGCACTGGTACACAAATGTAATAATCTCCACTTCACAAATCGCCTGTCACAAATCTTACATTGGCAAAGCTCTTCGCGATATGTTTTAGTCTTTCCCTGTCCAACTGCATGGTCTGGTCTGGTCTGACTATCTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAACCCCAGTGTTGAGACGCATACTTGAGGCTCACGTTGCATGTTGACGATTTGGCGGAGTCAGCATCAACAGCTGAATAGCTGCTCTTGTATCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACACATCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAATGGTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX624764             [                                         GGAAGAAGATTGCCTAACAAGAGGCACAAACACTCATAAAGCATAAACGTATTTTTCCAGAACTGTAAGGAACCATCCACCTCATGCTTTAAGCAACGCGAAACAATGGCGCAACCATTCAAAG        ACAGCACAGCACTGGTACACAAATGTAATAATCTCCACTTCACAAATCGCCTGACACAACTCTTACATTGGCAAAGCTCTTCGCGATATGTTTTAGTCTTTCCCTGTCCAAATGCA   TCTGGTCTGGTCTGACTATCTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAATCCCAGTGTTGAGACGGAGACTTGAGGCTCACGTTGCATGTTGACAATTTGGCGGAGTCAGCATCAACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACACACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAAT GTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTCGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGGTAGTAACACTCTAATTTTGTGCCAT                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM637336             [                                                                                                                                                                                                  ccgGTAATAATCTCCACTTCACAAATCGCCTGACACAACTCTTACATTGGCAAAGCTCTTCGCGATATGTTTTAGTCTTTCCCTGTCCAAATGCA   TCTGGTCTGGTCTGACTATCTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAATCCCAGTGTTGAGACGGAGACTTGAGGCTCACGTTGCATGTTGACAATTTGGCGGAGTCAGCATCAACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACACACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAAT GTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCT TGCTCAAATCATCCCCTTCCCCATCTACTCTCAGTACAATGCTTTCGTG                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM646212             [                                                                                                                                                                                                                                                          ccgTCGCGATATGTTTTAGTCTTTCCCTGTCCAAATGCA   TCTGGTCTGGTCTGACTATCTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAATCCCAGTGTTGAGACGGAGACTTGAGGCTCACGTTGCATGTTGACAATTTGGCGGAGTCAGCATCAACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACACACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAAT GTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCT TGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATC                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM596607             [                                                                                                                                                                                                                                                                                                                                                                                        ccgCGCATACTTGAGGCTCACGTTGCATGTTGACGATTTGGCGGAGTCAGCATCAACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACACACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAAT GTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGATTTAAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAGAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTT                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX622318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGGATAGGTTTTAGCACACACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAAT GTAACCCCTTTGCATAGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCTNTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAGANGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAACCAACCAGAGAAGCAACAAATTACATATGGGAGGGGCGGGAAATAAATACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATATTCGGCGCAGCATAAC]
[+] EMBL BX603245             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAT GAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCT TGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCG                                                                                                                                                                                                                                                                                                             ]


>consensus_8568#0 CCGATAAAAATTCAATAATCATACGATATGAGAGTAATGTGGGAGAAAGATTGCCTAACA AGAGGCACAAACACTCATAAAGCATAAACGTCTTTTTCCGGAACTGTAAGGAACCATCCA CCTCATGCTTTAAGCAACGCGAAACAATGGCGCAACCATTCAAAGACAGCACAGCACTGG TACACAAATGTAATAATCTCCACTTCACAAATCGCCTGACACAACTCTTACATTGGCAAA GCTCTTCGCGATATGTTTTAGTCTTTCCCTGTCCAAATGCATCTGGTCTGGTCTGACTAT CTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAATCCCAG TGTTGAGACGGAGACTTGAGGCTCACGTTGCATGTTGACAATTTGGCGGAGTCAGCATCA ACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACAC ACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAATGTAACCCCTTTGCAT AGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGA GAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTA CTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACAT ATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTT TGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTT TACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTC AGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCAC ATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATAC AAACGAGCCATAGGCGAGGCAGAGTAGAAGANGGAGAAAAACTATCCAGACAAACAAAAA CGCATTTATAAACCAACCAGAGAAGCAACAAATTACATATGGGAGGGGCGGGAAATAAAT ACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATA TTCGGCGCAGCATAAC



consensusID : consensus_8568#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1103
fasta sequence
                              [CCGGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGATTTAAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAGAGGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAACCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGG-AAAGCCGATTGATCAATTCAAAATTATTCTTAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGTTATGTTTTGTTGTGACTATTATGTTACGTTCTGTCATAGGCAAGGGTGGGGCAAAGCAAATGCAGCGTAAATGCGCAACAAATTACATATGGGAGGGCCGGAAATAAATACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATATTCGGCGCAGCATAACCAGGCC-AAAATTCAGAAAGCAAACACAA-CAAATCACCTAAACAAACTTCGAA--ATACTACAAACTGCAGAACAG---CAGAATAAGCAGCGAGCGAAATACTGAACCATCATCGTCTCTCATTACAGTAAAAACAGAAACGATAGACGGATGGGATAATAAAAGGAAAAGTAAATTTAATATACAAACACTACAAAAAAAGAGGAATAAACACACATGGAGCGCATTCATGAGAAAGCATTGTAAATAAAAGAATCTTTACAGTGT]

[+] EMBL BM648013             [CCGGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAATAATTATGGGATGTTAGAAACTGGGATTTAAACGCTTAAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAGAGGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAACCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAAGCCGATTGATCAATTCAAAATTATTCTTAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM591054             [                                                                                                                                                                                                                                                                                                                                                                                          ccgGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAGGGGGAGAAAAACTATGCAGACAAACAAAAACGCATTTATAAACCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGG AAAGCCGATTGATCAATTCAAAATTATTCTTAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTAATGGCAGGTATGTTTTGTTGTGACTATTATGTTACGTTCTGTCATAGGCAAGGGTGGGGCAAAGCAAATGCAGCGTAAATGCGCAACAAATTACATATGGGAGGGCCGGAAATAAATACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATATTCGGCGCAGCATAACCAGGCC AAAATTCAGAAAGCAAACACAAGCAAATCACCTAAACAAACTTCGAA  ATACTACAAACTGCAGAACAGCATCAGAATAAGCAGCGAGCGAAATACTGAACCATCATCGTCTCTCATTACAGTAAAAACAGAAACGATAGACGGATGGGATAATAAAAGGAAAAGTAAATTTAATATAC                                                                                  ]
[+] EMBL BM596216             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgGATGG AAAGCCGATTGATCAATTCAAAATTATTCTTAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGTTATGTTTTGTTGTGACCATTATGTTACGTTCCGTCATAGGCAAGGGTGGGGCAAAGCAAATGCAGCGTAAATGCGCAACAAATTACATATGGGAGGGCCGGAAATAAATACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATATTCGGCGCAGCATAACCAGGCCAAAAATTCAGAAAGCAAACACAA CAAATCACCTAAACAAACTTCGAAATATACTACAAGCCGCAGAACAG   CAGTATAAGCAGCGAGCGAAATACTGAACCATCATCGTCTCTCATTACAGTAAAAACAGAAACGATAGACGGATGGGATAATAAAAGGAAAAGTAAATTTAATATACAAACACTACAAAAAAAGAGGAATAAACACACATGGAGCGCATTCATGAGAAAGCATTGTAAATAAAAGAATCTTTACAGTGT]


>consensus_8568#1 CCGGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGAGAAACAAATAA TAATTATGGGATGTTAGAAACTGGGATTTAAACGCTTAAGCTAGCGCTACTCTTCCACTA TTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATT TAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGG TGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTT TTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCT TTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAA CGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCAT AGGCGAGGCAGAGTAGAAGAGGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAA ACCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAGCCGATTGATCAATTCAAA ATTATTCTTAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGTTATG TTTTGTTGTGACTATTATGTTACGTTCTGTCATAGGCAAGGGTGGGGCAAAGCAAATGCA GCGTAAATGCGCAACAAATTACATATGGGAGGGCCGGAAATAAATACAATCCCACTTTTT GTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATATATTCGGCGCAGCATAA CCAGGCCAAAATTCAGAAAGCAAACACAACAAATCACCTAAACAAACTTCGAAATACTAC AAACTGCAGAACAGCAGAATAAGCAGCGAGCGAAATACTGAACCATCATCGTCTCTCATT ACAGTAAAAACAGAAACGATAGACGGATGGGATAATAAAAGGAAAAGTAAATTTAATATA CAAACACTACAAAAAAAGAGGAATAAACACACATGGAGCGCATTCATGAGAAAGCATTGT AAATAAAAGAATCTTTACAGTGT



consensusID : consensus_8568#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 639
fasta sequence
                              [AATCGCCACGAGGTGGAAACTGGGCTTCTAACGCTTAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAAGGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAAGCCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAGCCGATTGATCAATTCAAGAATTATTCTGAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGTAATGTTTGGTTGTGACCATTAATGGTTACGTTCCGTCATAGCAA]

[+] EMBL BX466230             [AATCGCCACGAGGTGGAAACTGGGCTTCTAACGCTTAGCTAGCGCTACTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAGGCGAGGCAGAGTAGAAAGGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAAGCCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAGCCGATTGATCAATTCAAGAATTATTCTGAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGTAATGTTTGGTTGTGACCATTAATGGTTACGTTCCGTCATAGCAA]


>consensus_8568#2 AATCGCCACGAGGTGGAAACTGGGCTTCTAACGCTTAGCTAGCGCTACTCTTCCACTATT TTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACATATATACATATTTA ATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTTTGTGCCATTGGTG GCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTTTACATCCTCTTTT CCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTCAGTACAATGCTTT CGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCACATTCTTGGAAACG TTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATACAAACGAGCCATAG GCGAGGCAGAGTAGAAAGGGAGAAAAACTATCCAGACAAACAAAAACGCATTTATAAAGC CAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAGCCGATTGATCAATTCAAGAA TTATTCTGAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCTGATGGCAGTAATGT TTGGTTGTGACCATTAATGGTTACGTTCCGTCATAGCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      CCGATAAAAATTCAATAATCATACGATATGAGAGTAATGTGGGAGAAAGATTGCCTAACA 60
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      AGAGGCACAAACACTCATAAAGCATAAACGTCTTTTTCCGGAACTGTAAGGAACCATCCA 120
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      CCTCATGCTTTAAGCAACGCGAAACAATGGCGCAACCATTCAAAGACAGCACAGCACTGG 180
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      TACACAAATGTAATAATCTCCACTTCACAAATCGCCTGACACAACTCTTACATTGGCAAA 240
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      GCTCTTCGCGATATGTTTTAGTCTTTCCCTGTCCAAATGCATCTGGTCTGGTCTGACTAT 300
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      CTTTTTCGCGCGAAAACGCTGATTTTCAAACGCTGATTCTATACTTAAGAATAATCCCAG 360
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      TGTTGAGACGGAGACTTGAGGCTCACGTTGCATGTTGACAATTTGGCGGAGTCAGCATCA 420
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ACAGCTGATGAATAGCTCTTGTACCGATTTTGGAATGCTTTGGGATAGGTTTTAGCACAC 480
                                                                                  

consensus_8568#1      ------------------------------------------------------------
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ACCAGGCCTAACGTTAGGTGGGTTTCGAATTGCAAACATGGAAATGTAACCCCTTTGCAT 540
                                                                                  

consensus_8568#1      -----------CCGGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGA 49
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      AGGCGCTTCTGACTGAAGAATTAGAACGAGAAAGTGGAATGCGTAATAGATTTATAGAGA 600
                                                                                  

consensus_8568#1      GAAACAAATAATAATTATGGGATGTTAGAAACTGGGATTTAAACGCTTAAGCTAGCGCTA 109
consensus_8568#2      ---------AATCGCCACGAGGTG---GAAACTGGGCTTCTAACGCTTA-GCTAGCGCTA 47
consensus_8568#0      GAAACAAATAATAATTATGGGATGTTAGAAACTGGGCTTCTAACGCTTAAGCTAGCGCTA 660
                               ***    * * * **   ********* **  ******** **********

consensus_8568#1      CTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACAT 169
consensus_8568#2      CTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACAT 107
consensus_8568#0      CTCTTCCACTATTTTATGTATCTTTATCGGTTTAAGTGAAAACCATACTGAATCAAACAT 720
                      ************************************************************

consensus_8568#1      ATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTT 229
consensus_8568#2      ATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTT 167
consensus_8568#0      ATATACATATTTAATCTAAAGCGTTTACTTTATTTTACTCTGTTAGTAACACTCTAATTT 780
                      ************************************************************

consensus_8568#1      TGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTT 289
consensus_8568#2      TGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTT 227
consensus_8568#0      TGTGCCATTGGTGGCGAGCAATTGCCGTCACCGTGTTGCGCGTTTCCTTTGCAATGGTTT 840
                      ************************************************************

consensus_8568#1      TACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTC 349
consensus_8568#2      TACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTC 287
consensus_8568#0      TACATCCTCTTTTCCACCTTCTGTTTCTTGCTCAAATCATCCCCTTCCCCCTCTACTCTC 900
                      ************************************************************

consensus_8568#1      AGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCAC 409
consensus_8568#2      AGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCAC 347
consensus_8568#0      AGTACAATGCTTTCGTGCGCGCGTGTGTGCGAGATGATCACAATATTCATGCATAATCAC 960
                      ************************************************************

consensus_8568#1      ATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATAC 469
consensus_8568#2      ATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATAC 407
consensus_8568#0      ATTCTTGGAAACGTTGATCTTTAATCAGCTTGATACAATCATTACCCAATTTTATCATAC 1020
                      ************************************************************

consensus_8568#1      AAACGAGCCATAGGCGAGGCAGAGTAGAAGAGGGAGAAAAACTATCCAGACAAACAAAAA 529
consensus_8568#2      AAACGAGCCATAGGCGAGGCAGAGTAGAA-AGGGAGAAAAACTATCCAGACAAACAAAAA 466
consensus_8568#0      AAACGAGCCATAGGCGAGGCAGAGTAGAAGANGGAGAAAAACTATCCAGACAAACAAAAA 1080
                      ***************************** * ****************************

consensus_8568#1      CGCATTTATAAA-CCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAGCCGATT 588
consensus_8568#2      CGCATTTATAAAGCCAACCAGAGAAGCAACAGGTAGAGACATTCCGATGGAAAGCCGATT 526
consensus_8568#0      CGCATTTATAAA-CCAACCAGAGAAGCAACAAATT---ACATATGG---GAGGGGCGGGA 1133
                      ************ ******************  *    ****   *   **  * **   

consensus_8568#1      GATCAATTCAA-AATTATTCTTAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCT 647
consensus_8568#2      GATCAATTCAAGAATTATTCTGAGCACAGTCCAGTAACGGTTTAGAATGAGTTTCGTGCT 586
consensus_8568#0      AATAAATACAATCCCACTTTTTGTCAGATATACGTAG-----TCAAAT---TCGCACACC 1185
                       ** *** ***      ** *   ** *     ***      *  ***   *  *   * 

consensus_8568#1      GATGGCAGTTATGT-TTTGTTGTGACTATTAT--GTTACGTTCTGTCATAGGCAAGGGTG 704
consensus_8568#2      GATGGCAGTAATGT-TTGGTTGTGACCATTAATGGTTACGTTCCGTCATAG-CAA----- 639
consensus_8568#0      AGAGAACTCTATATATTCGGCGCAGC-ATAAC---------------------------- 1216
                         *      ** * ** *  *   * ** *                             

consensus_8568#1      GGGCAAAGCAAATGCAGCGTAAATGCGCAACAAATTACATATGGGAGGGCCGGAAATAAA 764
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ------------------------------------------------------------
                                                                                  

consensus_8568#1      TACAATCCCACTTTTTGTCAGATATACGTAGTCAAATTCGCACACCAGAGAACTCTATAT 824
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ------------------------------------------------------------
                                                                                  

consensus_8568#1      ATTCGGCGCAGCATAACCAGGCCAAAATTCAGAAAGCAAACACAACAAATCACCTAAACA 884
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ------------------------------------------------------------
                                                                                  

consensus_8568#1      AACTTCGAAATACTACAAACTGCAGAACAGCAGAATAAGCAGCGAGCGAAATACTGAACC 944
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ------------------------------------------------------------
                                                                                  

consensus_8568#1      ATCATCGTCTCTCATTACAGTAAAAACAGAAACGATAGACGGATGGGATAATAAAAGGAA 1004
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ------------------------------------------------------------
                                                                                  

consensus_8568#1      AAGTAAATTTAATATACAAACACTACAAAAAAAGAGGAATAAACACACATGGAGCGCATT 1064
consensus_8568#2      ------------------------------------------------------------
consensus_8568#0      ------------------------------------------------------------
                                                                                  

consensus_8568#1      CATGAGAAAGCATTGTAAATAAAAGAATCTTTACAGTGT 1103
consensus_8568#2      ---------------------------------------
consensus_8568#0      ---------------------------------------
                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)